Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
15:57:22 (3133315): wrapper (7.7.26015): starting
15:57:22 (3133315): wrapper: running run_atlas (--nthreads 3)
[2026-01-28 15:57:22] Arguments: --nthreads 3
[2026-01-28 15:57:22] Threads: 3
[2026-01-28 15:57:22] Checking for CVMFS
[2026-01-28 15:57:23] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-28 15:57:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-28 15:57:24] Running cvmfs_config stat atlas.cern.ch
[2026-01-28 15:57:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-28 15:57:24] 2.9.2.0 3133510 0 30032 155622 3 1 24116138 36864001 0 130560 0 0 0.000 1336 17578 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-28 15:57:24] CVMFS is ok
[2026-01-28 15:57:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-28 15:57:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-28 15:57:24] Further information can be found at the LHC@home message board.
[2026-01-28 15:57:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-28 15:57:24] Checking for apptainer binary...
[2026-01-28 15:57:24] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-28 15:57:24] Running /usr/bin/apptainer --version
[2026-01-28 15:57:24] apptainer version 1.4.1-1.1
[2026-01-28 15:57:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-28 15:57:24] thA335b
[2026-01-28 15:57:24] apptainer works
[2026-01-28 15:57:24] Set ATHENA_PROC_NUMBER=3
[2026-01-28 15:57:24] Set ATHENA_CORE_NUMBER=3
[2026-01-28 15:57:24] Starting ATLAS job with PandaID=6985340578
[2026-01-28 15:57:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-28 17:17:45]  *** The last 200 lines of the pilot log: ***
[2026-01-28 17:17:45] 2026-01-28 16:16:54,961 | INFO     | [job] retrieve thread has finished
[2026-01-28 17:17:45] 2026-01-28 16:16:54,961 | INFO     | [job] queue monitor thread has finished
[2026-01-28 17:17:45] 2026-01-28 16:16:55,120 | INFO     | [data] copytool_in thread has finished
[2026-01-28 17:17:45] 2026-01-28 16:16:55,228 | INFO     | all job control threads have been joined
[2026-01-28 17:17:45] 2026-01-28 16:16:55,239 | INFO     | [payload] failed_post thread has finished
[2026-01-28 17:17:45] 2026-01-28 16:16:55,287 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-28 17:17:45] 2026-01-28 16:16:55,495 | INFO     | [payload] control thread has finished
[2026-01-28 17:17:45] 2026-01-28 16:16:55,573 | WARNING  | process 3142018 can no longer be monitored (due to stat problems) - aborting
[2026-01-28 17:17:45] 2026-01-28 16:16:55,601 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-28 17:17:45] 2026-01-28 16:16:55,636 | INFO     | number of running child processes to parent process 3142018: 1
[2026-01-28 17:17:45] 2026-01-28 16:16:55,636 | INFO     | maximum number of monitored processes: 6
[2026-01-28 17:17:45] 2026-01-28 16:16:55,636 | INFO     | aborting job monitoring since job object (job id=6985340578) has expired
[2026-01-28 17:17:45] 2026-01-28 16:16:55,636 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-28 17:17:45] 2026-01-28 16:16:55,636 | INFO     | will abort loop
[2026-01-28 17:17:45] 2026-01-28 16:16:55,805 | INFO     | [data] control thread has finished
[2026-01-28 17:17:45] 2026-01-28 16:16:55,971 | INFO     | [payload] execute_payloads thread has finished
[2026-01-28 17:17:45] 2026-01-28 16:16:56,197 | INFO     | [payload] validate_post thread has finished
[2026-01-28 17:17:45] 2026-01-28 16:16:56,234 | INFO     | [job] control thread has finished
[2026-01-28 17:17:45] 2026-01-28 16:16:56,390 | INFO     | [job] validate thread has finished
[2026-01-28 17:17:45] 2026-01-28 16:16:56,428 | INFO     | [job] create_data_payload thread has finished
[2026-01-28 17:17:45] 2026-01-28 16:16:56,456 | INFO     | [payload] validate_pre thread has finished
[2026-01-28 17:17:45] 2026-01-28 16:16:56,641 | INFO     | [job] job monitor thread has finished
[2026-01-28 17:17:45] 2026-01-28 16:16:57,293 | INFO     | [data] copytool_out thread has finished
[2026-01-28 17:17:45] 2026-01-28 16:16:57,962 | INFO     | [data] queue_monitor thread has finished
[2026-01-28 17:17:45] 2026-01-28 16:16:57,993 | INFO     | job.realtimelogging is not enabled
[2026-01-28 17:17:45] 2026-01-28 16:16:58,998 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-28 17:17:45] 2026-01-28 16:17:23,850 | INFO     | PID=3137583 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-28 17:17:45] 2026-01-28 16:17:23,851 | INFO     | found 0 job(s) in 20 queues
[2026-01-28 17:17:45] 2026-01-28 16:17:23,851 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-28 17:17:45] 2026-01-28 16:17:23,851 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-28 17:17:45] 2026-01-28 16:17:39,616 | INFO     | [monitor] cgroup control has ended
[2026-01-28 17:17:45] 2026-01-28 16:17:39,939 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140385048799040)>', '<ExcThread(monitor, started 140384395048704)>']
[2026-01-28 17:17:45] 2026-01-28 16:17:40,940 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-28 17:17:45] 2026-01-28 16:17:40,940 | INFO     | [monitor] control thread has ended
[2026-01-28 17:17:45] 2026-01-28 16:17:44,965 | INFO     | all workflow threads have been joined
[2026-01-28 17:17:45] 2026-01-28 16:17:44,965 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-28 17:17:45] 2026-01-28 16:17:44,966 | INFO     | traces error code: 0
[2026-01-28 17:17:45] 2026-01-28 16:17:44,966 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-28 17:17:45] 2026-01-28 16:17:45,016 [wrapper] ==== pilot stdout END ====
[2026-01-28 17:17:45] 2026-01-28 16:17:45,019 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-28 17:17:45] 2026-01-28 16:17:45,021 [wrapper] pilotpid: 3137583
[2026-01-28 17:17:45] 2026-01-28 16:17:45,023 [wrapper] Pilot exit status: 0
[2026-01-28 17:17:45] 2026-01-28 16:17:45,031 [wrapper] pandaids: 6985340578
[2026-01-28 17:17:45] 2026-01-28 16:17:45,049 [wrapper] cleanup supervisor_pilot 3147907 3137584
[2026-01-28 17:17:45] 2026-01-28 16:17:45,051 [wrapper] Test setup, not cleaning
[2026-01-28 17:17:45] 2026-01-28 16:17:45,054 [wrapper] apfmon messages muted
[2026-01-28 17:17:45] 2026-01-28 16:17:45,056 [wrapper] ==== wrapper stdout END ====
[2026-01-28 17:17:45] 2026-01-28 16:17:45,059 [wrapper] ==== wrapper stderr END ====
[2026-01-28 17:17:45]  *** Error codes and diagnostics ***
[2026-01-28 17:17:45]     "exeErrorCode": 0,
[2026-01-28 17:17:45]     "exeErrorDiag": "",
[2026-01-28 17:17:45]     "pilotErrorCode": 0,
[2026-01-28 17:17:45]     "pilotErrorDiag": "",
[2026-01-28 17:17:45]  *** Listing of results directory ***
[2026-01-28 17:17:45] total 667632
[2026-01-28 17:17:45] -rw-r--r-- 1 boinc boinc    584422 Jan 28 13:23 pilot3.tar.gz
[2026-01-28 17:17:45] -rwx------ 1 boinc boinc     36322 Jan 28 13:28 runpilot2-wrapper.sh
[2026-01-28 17:17:45] -rw-r--r-- 1 boinc boinc      5111 Jan 28 13:32 queuedata.json
[2026-01-28 17:17:45] -rw-r--r-- 1 boinc boinc       100 Jan 28 15:57 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-28 17:17:45] -rwxr-xr-x 1 boinc boinc      7986 Jan 28 15:57 run_atlas
[2026-01-28 17:17:45] -rw-r--r-- 1 boinc boinc       105 Jan 28 15:57 job.xml
[2026-01-28 17:17:45] -rw-r--r-- 2 boinc boinc 493527706 Jan 28 15:57 EVNT.48301084._000173.pool.root.1
[2026-01-28 17:17:45] -rw-r--r-- 2 boinc boinc    597767 Jan 28 15:57 input.tar.gz
[2026-01-28 17:17:45] -rw-r--r-- 2 boinc boinc     15845 Jan 28 15:57 start_atlas.sh
[2026-01-28 17:17:45] drwxrwx--x 2 boinc boinc      4096 Jan 28 15:57 shared
[2026-01-28 17:17:45] -rw-r--r-- 1 boinc boinc         0 Jan 28 15:57 boinc_setup_complete
[2026-01-28 17:17:45] -rw-r--r-- 1 boinc boinc      6445 Jan 28 15:57 init_data.xml
[2026-01-28 17:17:45] -rw-r--r-- 1 boinc boinc         0 Jan 28 15:57 boinc_lockfile
[2026-01-28 17:17:45] -rw-r--r-- 1 boinc boinc      2518 Jan 28 15:57 pandaJob.out
[2026-01-28 17:17:45] -rw------- 1 boinc boinc   1005192 Jan 28 15:57 agis_schedconf.cvmfs.json
[2026-01-28 17:17:45] -rw------- 1 boinc boinc   1516246 Jan 28 15:57 agis_ddmendpoints.agis.ALL.json
[2026-01-28 17:17:45] -rw------- 1 boinc boinc       424 Jan 28 15:57 workernode_map.json
[2026-01-28 17:17:45] drwx------ 5 boinc boinc      4096 Jan 28 15:57 pilot3
[2026-01-28 17:17:45] -rw------- 1 boinc boinc 184271510 Jan 28 17:16 HITS.48301086._010893.pool.root.1
[2026-01-28 17:17:45] -rw-r--r-- 1 boinc boinc       530 Jan 28 17:16 boinc_task_state.xml
[2026-01-28 17:17:45] -rw------- 1 boinc boinc      1011 Jan 28 17:16 memory_monitor_summary.json
[2026-01-28 17:17:45] -rw------- 1 boinc boinc    262153 Jan 28 17:16 log.48301086._010893.job.log.tgz.1
[2026-01-28 17:17:45] -rw------- 1 boinc boinc      6287 Jan 28 17:16 heartbeat.json
[2026-01-28 17:17:45] -rw------- 1 boinc boinc        95 Jan 28 17:17 pilot_heartbeat.json
[2026-01-28 17:17:45] -rw-r--r-- 1 boinc boinc      8192 Jan 28 17:17 boinc_mmap_file
[2026-01-28 17:17:45] -rw-r--r-- 1 boinc boinc        27 Jan 28 17:17 wrapper_checkpoint.txt
[2026-01-28 17:17:45] -rw------- 1 boinc boinc      5344 Jan 28 17:17 pilotlog.txt
[2026-01-28 17:17:45] -rw------- 1 boinc boinc    699928 Jan 28 17:17 log.48301086._010893.job.log.1
[2026-01-28 17:17:45] -rw------- 1 boinc boinc       357 Jan 28 17:17 output.list
[2026-01-28 17:17:45] -rw-r--r-- 1 boinc boinc       620 Jan 28 17:17 runtime_log
[2026-01-28 17:17:45] -rw------- 1 boinc boinc    983040 Jan 28 17:17 result.tar.gz
[2026-01-28 17:17:45] -rw-r--r-- 1 boinc boinc      8901 Jan 28 17:17 runtime_log.err
[2026-01-28 17:17:45] -rw------- 1 boinc boinc       658 Jan 28 17:17 3fJKDmgpJ58nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm1qFKDmj9Hv0m.diag
[2026-01-28 17:17:45] -rw-r--r-- 1 boinc boinc      7445 Jan 28 17:17 stderr.txt
[2026-01-28 17:17:45] HITS file was successfully produced:
[2026-01-28 17:17:45] -rw------- 1 boinc boinc 184271510 Jan 28 17:16 shared/HITS.pool.root.1
[2026-01-28 17:17:45]  *** Contents of shared directory: ***
[2026-01-28 17:17:45] total 663488
[2026-01-28 17:17:45] -rw-r--r-- 2 boinc boinc 493527706 Jan 28 15:57 ATLAS.root_0
[2026-01-28 17:17:45] -rw-r--r-- 2 boinc boinc    597767 Jan 28 15:57 input.tar.gz
[2026-01-28 17:17:45] -rw-r--r-- 2 boinc boinc     15845 Jan 28 15:57 start_atlas.sh
[2026-01-28 17:17:45] -rw------- 1 boinc boinc 184271510 Jan 28 17:16 HITS.pool.root.1
[2026-01-28 17:17:45] -rw------- 1 boinc boinc    983040 Jan 28 17:17 result.tar.gz
17:17:46 (3133315): run_atlas exited; CPU time 13626.291032
17:17:46 (3133315): called boinc_finish(0)

</stderr_txt>
]]>

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