Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
04:52:41 (717969): wrapper (7.7.26015): starting
04:52:41 (717969): wrapper: running run_atlas (--nthreads 12)
[2026-01-31 04:52:41] Arguments: --nthreads 12
[2026-01-31 04:52:41] Threads: 12
[2026-01-31 04:52:41] Checking for CVMFS
[2026-01-31 04:52:42] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-31 04:52:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-31 04:52:42] Running cvmfs_config stat atlas.cern.ch
[2026-01-31 04:52:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-31 04:52:44] 2.13.3.0 394476 3313 55508 155702 0 50 2442343 4096001 912 130560 0 971252 99.964 238470 2278 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2026-01-31 04:52:44] CVMFS is ok
[2026-01-31 04:52:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-31 04:52:44] Checking for apptainer binary...
[2026-01-31 04:52:44] apptainer is not installed, using version from CVMFS
[2026-01-31 04:52:44] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-31 04:52:45] g6400
[2026-01-31 04:52:45] apptainer works
[2026-01-31 04:52:45] Set ATHENA_PROC_NUMBER=12
[2026-01-31 04:52:45] Set ATHENA_CORE_NUMBER=12
[2026-01-31 04:52:46] Starting ATLAS job with PandaID=6984628924
[2026-01-31 04:52:46] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-31 09:56:06]  *** The last 200 lines of the pilot log: ***
[2026-01-31 09:56:06] 2026-01-31 09:55:01,747 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-31 09:56:06] 2026-01-31 09:55:01,747 | INFO     | log transfer has been attempted: DONE
[2026-01-31 09:56:06] 2026-01-31 09:55:01,747 | INFO     | job 6984628924 has finished - writing final server update
[2026-01-31 09:56:06] 2026-01-31 09:55:01,748 | INFO     | total number of processed events: 400 (read)
[2026-01-31 09:56:06] 2026-01-31 09:55:01,780 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/0/PanDA_Pilot-6984628924/memory_monitor_summary.json (trf name=prmon)
[2026-01-31 09:56:06] 2026-01-31 09:55:01,781 | INFO     | extracted standard info from prmon json
[2026-01-31 09:56:06] 2026-01-31 09:55:01,781 | INFO     | extracted standard memory fields from prmon json
[2026-01-31 09:56:06] 2026-01-31 09:55:01,781 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-31 09:56:06] 2026-01-31 09:55:01,784 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-31 09:56:06] 2026-01-31 09:55:01,784 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-31 09:56:06] 2026-01-31 09:55:01,787 | INFO     | fitting pss+swap vs Time
[2026-01-31 09:56:06] 2026-01-31 09:55:01,788 | INFO     | sum of square deviations: 7960484140.0
[2026-01-31 09:56:06] 2026-01-31 09:55:01,801 | INFO     | sum of deviations: -6397537260.000004
[2026-01-31 09:56:06] 2026-01-31 09:55:01,801 | INFO     | mean x: 1769844312.0
[2026-01-31 09:56:06] 2026-01-31 09:55:01,802 | INFO     | mean y: 2675095.3288135594
[2026-01-31 09:56:06] 2026-01-31 09:55:01,802 | INFO     | intersect: 1425031415.7848544
[2026-01-31 09:56:06] 2026-01-31 09:55:01,802 | INFO     | chi2: 3.056755725565642
[2026-01-31 09:56:06] 2026-01-31 09:55:01,802 | INFO     | sum of square deviations: 7562532492.5
[2026-01-31 09:56:06] 2026-01-31 09:55:01,816 | INFO     | sum of deviations: 35143059957.0
[2026-01-31 09:56:06] 2026-01-31 09:55:01,816 | INFO     | mean x: 1769844159.5
[2026-01-31 09:56:06] 2026-01-31 09:55:01,816 | INFO     | mean y: 2690850.2620689655
[2026-01-31 09:56:06] 2026-01-31 09:55:01,816 | INFO     | intersect: -8221768280.794652
[2026-01-31 09:56:06] 2026-01-31 09:55:01,816 | INFO     | chi2: 1.5067908255177596
[2026-01-31 09:56:06] 2026-01-31 09:55:01,817 | INFO     | current chi2=1.5067908255177596 (change=50.70620746972075 %)
[2026-01-31 09:56:06] 2026-01-31 09:55:01,817 | INFO     | sum of square deviations: 7178069470.0
[2026-01-31 09:56:06] 2026-01-31 09:55:01,818 | INFO     | sum of deviations: 33954110421.000004
[2026-01-31 09:56:06] 2026-01-31 09:55:01,818 | INFO     | mean x: 1769844007.0
[2026-01-31 09:56:06] 2026-01-31 09:55:01,818 | INFO     | mean y: 2690378.6245614034
[2026-01-31 09:56:06] 2026-01-31 09:55:01,819 | INFO     | intersect: -8369125900.49862
[2026-01-31 09:56:06] 2026-01-31 09:55:01,819 | INFO     | chi2: 1.507188645549217
[2026-01-31 09:56:06] 2026-01-31 09:55:01,819 | INFO     | current chi2=1.507188645549217 (change=-0.026401808712943786 %)
[2026-01-31 09:56:06] 2026-01-31 09:55:01,819 | INFO     | right removable region: 284
[2026-01-31 09:56:06] 2026-01-31 09:55:01,819 | INFO     | sum of square deviations: 7562532492.5
[2026-01-31 09:56:06] 2026-01-31 09:55:01,833 | INFO     | sum of deviations: -51077651397.5
[2026-01-31 09:56:06] 2026-01-31 09:55:01,833 | INFO     | mean x: 1769844464.5
[2026-01-31 09:56:06] 2026-01-31 09:55:01,833 | INFO     | mean y: 2692059.5
[2026-01-31 09:56:06] 2026-01-31 09:55:01,833 | INFO     | intersect: 11956293406.030157
[2026-01-31 09:56:06] 2026-01-31 09:55:01,833 | INFO     | chi2: 1.6427380356109165
[2026-01-31 09:56:06] 2026-01-31 09:55:01,833 | INFO     | current chi2=1.6427380356109165 (change=46.2587729247834 %)
[2026-01-31 09:56:06] 2026-01-31 09:55:01,834 | INFO     | sum of square deviations: 7178069470.0
[2026-01-31 09:56:06] 2026-01-31 09:55:01,835 | INFO     | sum of deviations: -44554244145.0
[2026-01-31 09:56:06] 2026-01-31 09:55:01,835 | INFO     | mean x: 1769844617.0
[2026-01-31 09:56:06] 2026-01-31 09:55:01,835 | INFO     | mean y: 2689468.2842105264
[2026-01-31 09:56:06] 2026-01-31 09:55:01,835 | INFO     | intersect: 10988106855.799688
[2026-01-31 09:56:06] 2026-01-31 09:55:01,852 | INFO     | chi2: 1.6333736932946241
[2026-01-31 09:56:06] 2026-01-31 09:55:01,852 | INFO     | current chi2=1.6333736932946241 (change=0.5700447736214894 %)
[2026-01-31 09:56:06] 2026-01-31 09:55:01,852 | INFO     | left removable region: 20
[2026-01-31 09:56:06] 2026-01-31 09:55:01,852 | INFO     | sum of square deviations: 5705372090.0
[2026-01-31 09:56:06] 2026-01-31 09:55:01,854 | INFO     | sum of deviations: 9517714649.000002
[2026-01-31 09:56:06] 2026-01-31 09:55:01,854 | INFO     | mean x: 1769844586.5
[2026-01-31 09:56:06] 2026-01-31 09:55:01,854 | INFO     | mean y: 2699483.1742424243
[2026-01-31 09:56:06] 2026-01-31 09:55:01,854 | INFO     | intersect: -2949759266.520451
[2026-01-31 09:56:06] 2026-01-31 09:55:01,854 | INFO     | chi2: 0.011678405227280263
[2026-01-31 09:56:06] 2026-01-31 09:55:01,854 | INFO     | current memory leak: 1.67 B/s (using 264 data points, chi2=0.01)
[2026-01-31 09:56:06] 2026-01-31 09:55:01,855 | INFO     | could have reported an average CPU frequency of 3999 MHz (13 samples)
[2026-01-31 09:56:06] 2026-01-31 09:55:01,855 | INFO     | ..............................
[2026-01-31 09:56:06] 2026-01-31 09:55:01,855 | INFO     | . Timing measurements:
[2026-01-31 09:56:06] 2026-01-31 09:55:01,855 | INFO     | . get job = 0 s
[2026-01-31 09:56:06] 2026-01-31 09:55:01,855 | INFO     | . initial setup = 40 s
[2026-01-31 09:56:06] 2026-01-31 09:55:01,855 | INFO     | . payload setup = 49 s
[2026-01-31 09:56:06] 2026-01-31 09:55:01,855 | INFO     | . stage-in = 0 s
[2026-01-31 09:56:06] 2026-01-31 09:55:01,855 | INFO     | . payload execution = 17967 s
[2026-01-31 09:56:06] 2026-01-31 09:55:01,855 | INFO     | . stage-out = 3 s
[2026-01-31 09:56:06] 2026-01-31 09:55:01,855 | INFO     | . log creation = 0 s
[2026-01-31 09:56:06] 2026-01-31 09:55:01,855 | INFO     | ..............................
[2026-01-31 09:56:06] 2026-01-31 09:55:02,352 | INFO     | 
[2026-01-31 09:56:06] 2026-01-31 09:55:02,352 | INFO     | job summary report
[2026-01-31 09:56:06] 2026-01-31 09:55:02,352 | INFO     | --------------------------------------------------
[2026-01-31 09:56:06] 2026-01-31 09:55:02,352 | INFO     | PanDA job id: 6984628924
[2026-01-31 09:56:06] 2026-01-31 09:55:02,352 | INFO     | task id: 48317971
[2026-01-31 09:56:06] 2026-01-31 09:55:02,352 | INFO     | errors: (none)
[2026-01-31 09:56:06] 2026-01-31 09:55:02,352 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-31 09:56:06] 2026-01-31 09:55:02,352 | INFO     | pilot state: finished 
[2026-01-31 09:56:06] 2026-01-31 09:55:02,352 | INFO     | transexitcode: 0
[2026-01-31 09:56:06] 2026-01-31 09:55:02,352 | INFO     | exeerrorcode: 0
[2026-01-31 09:56:06] 2026-01-31 09:55:02,352 | INFO     | exeerrordiag: 
[2026-01-31 09:56:06] 2026-01-31 09:55:02,353 | INFO     | exitcode: 0
[2026-01-31 09:56:06] 2026-01-31 09:55:02,353 | INFO     | exitmsg: OK
[2026-01-31 09:56:06] 2026-01-31 09:55:02,353 | INFO     | cpuconsumptiontime: 35576 s
[2026-01-31 09:56:06] 2026-01-31 09:55:02,353 | INFO     | nevents: 400
[2026-01-31 09:56:06] 2026-01-31 09:55:02,353 | INFO     | neventsw: 0
[2026-01-31 09:56:06] 2026-01-31 09:55:02,353 | INFO     | pid: 726381
[2026-01-31 09:56:06] 2026-01-31 09:55:02,353 | INFO     | pgrp: 726381
[2026-01-31 09:56:06] 2026-01-31 09:55:02,353 | INFO     | corecount: 12
[2026-01-31 09:56:06] 2026-01-31 09:55:02,353 | INFO     | event service: False
[2026-01-31 09:56:06] 2026-01-31 09:55:02,353 | INFO     | sizes: {0: 2277844, 1: 2278305, 2: 2278305, 18020: 2310538, 18021: 2310537, 18025: 2319637, 18027: 2319821, 18029: 2320015}
[2026-01-31 09:56:06] 2026-01-31 09:55:02,353 | INFO     | --------------------------------------------------
[2026-01-31 09:56:06] 2026-01-31 09:55:02,353 | INFO     | 
[2026-01-31 09:56:06] 2026-01-31 09:55:02,353 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/0
[2026-01-31 09:56:06] 2026-01-31 09:55:02,664 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-31 09:56:06] 2026-01-31 09:55:02,664 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-31 09:56:06] 2026-01-31 09:55:02,664 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-31 09:56:06] 2026-01-31 09:55:02,664 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-31 09:56:06] 2026-01-31 09:55:02,664 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-31 09:56:06] 2026-01-31 09:55:02,664 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-31 09:56:06] 2026-01-31 09:55:02,664 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-31 09:56:06] 2026-01-31 09:55:02,665 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-31 09:56:06] 2026-01-31 09:55:02,665 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-31 09:56:06] 2026-01-31 09:55:02,665 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-31 09:56:06] 2026-01-31 09:55:02,665 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-31 09:56:06] 2026-01-31 09:55:02,665 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-31 09:56:06] 2026-01-31 09:55:02,665 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-31 09:56:06] 2026-01-31 09:55:02,665 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-31 09:56:06] 2026-01-31 09:55:02,665 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-31 09:56:06] 2026-01-31 09:55:02,665 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-31 09:56:06] 2026-01-31 09:55:02,665 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-31 09:56:06] 2026-01-31 09:55:02,665 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-31 09:56:06] 2026-01-31 09:55:02,665 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-31 09:56:06] 2026-01-31 09:55:02,665 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-31 09:56:06] 2026-01-31 09:55:02,665 | INFO     | job 6984628924 has completed (purged errors)
[2026-01-31 09:56:06] 2026-01-31 09:55:02,666 | INFO     | overall cleanup function is called
[2026-01-31 09:56:06] 2026-01-31 09:55:03,676 | INFO     | --- collectZombieJob: --- 10, [726381]
[2026-01-31 09:56:06] 2026-01-31 09:55:03,676 | INFO     | zombie collector waiting for pid 726381
[2026-01-31 09:56:06] 2026-01-31 09:55:03,676 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-31 09:56:06] 2026-01-31 09:55:03,676 | INFO     | collected zombie processes
[2026-01-31 09:56:06] 2026-01-31 09:55:03,676 | INFO     | will attempt to kill all subprocesses of pid=726381
[2026-01-31 09:56:06] 2026-01-31 09:55:03,834 | INFO     | process IDs to be killed: [726381] (in reverse order)
[2026-01-31 09:56:06] 2026-01-31 09:55:03,980 | WARNING  | found no corresponding commands to process id(s)
[2026-01-31 09:56:06] 2026-01-31 09:55:03,980 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-31 09:56:06] 2026-01-31 09:55:03,982 | INFO     | did not find any defunct processes belonging to 726381
[2026-01-31 09:56:06] 2026-01-31 09:55:03,983 | INFO     | did not find any defunct processes belonging to 726381
[2026-01-31 09:56:06] 2026-01-31 09:55:03,983 | INFO     | ready for new job
[2026-01-31 09:56:06] 2026-01-31 09:55:03,983 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-31 09:56:06] 2026-01-31 09:55:03,992 | INFO     | **************************************
[2026-01-31 09:56:06] 2026-01-31 09:55:03,992 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-31 09:56:06] 2026-01-31 09:55:03,992 | INFO     | **************************************
[2026-01-31 09:56:06] 2026-01-31 09:55:03,992 | INFO     | 
[2026-01-31 09:56:06] 2026-01-31 09:55:04,012 | INFO     | architecture information:
[2026-01-31 09:56:06] 2026-01-31 09:55:04,016 | INFO     | executing command: cat /etc/os-release
[2026-01-31 09:56:06] 2026-01-31 09:55:04,065 | INFO     | cat /etc/os-release:
[2026-01-31 09:56:06] NAME="CentOS Linux"
[2026-01-31 09:56:06] VERSION="7 (Core)"
[2026-01-31 09:56:06] ID="centos"
[2026-01-31 09:56:06] ID_LIKE="rhel fedora"
[2026-01-31 09:56:06] VERSION_ID="7"
[2026-01-31 09:56:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-31 09:56:06] ANSI_COLOR="0;31"
[2026-01-31 09:56:06] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-31 09:56:06] HOME_URL="https://www.centos.org/"
[2026-01-31 09:56:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-31 09:56:06] 
[2026-01-31 09:56:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-31 09:56:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-31 09:56:06] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-31 09:56:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-31 09:56:06] 
[2026-01-31 09:56:06] 2026-01-31 09:55:04,065 | INFO     | **************************************
[2026-01-31 09:56:06] 2026-01-31 09:55:04,568 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/0
[2026-01-31 09:56:06] 2026-01-31 09:55:04,604 | INFO     | sufficient remaining disk space (188894674944 B)
[2026-01-31 09:56:06] 2026-01-31 09:55:04,604 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-31 09:56:06] 2026-01-31 09:55:04,604 | INFO     | current server update state: UPDATING_FINAL
[2026-01-31 09:56:06] 2026-01-31 09:55:04,605 | INFO     | update_server=False
[2026-01-31 09:56:06] 2026-01-31 09:55:04,605 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-31 09:56:06] 2026-01-31 09:55:04,611 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-31 09:56:06] 2026-01-31 09:55:04,828 | INFO     | all job control threads have been joined
[2026-01-31 09:56:06] 2026-01-31 09:55:05,434 | INFO     | all data control threads have been joined
[2026-01-31 09:56:06] 2026-01-31 09:55:05,580 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-31 09:56:06] 2026-01-31 09:55:05,580 | INFO     | aborting loop
[2026-01-31 09:56:06] 2026-01-31 09:55:05,592 | INFO     | all payload control threads have been joined
[2026-01-31 09:56:06] 2026-01-31 09:55:05,612 | INFO     | [job] retrieve thread has finished
[2026-01-31 09:56:06] 2026-01-31 09:55:05,612 | INFO     | [payload] failed_post thread has finished
[2026-01-31 09:56:06] 2026-01-31 09:55:05,832 | INFO     | [job] control thread has finished
[2026-01-31 09:56:06] 2026-01-31 09:55:05,868 | INFO     | [payload] validate_pre thread has finished
[2026-01-31 09:56:06] 2026-01-31 09:55:05,996 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-31 09:56:06] 2026-01-31 09:55:06,016 | INFO     | [data] copytool_in thread has finished
[2026-01-31 09:56:06] 2026-01-31 09:55:06,436 | INFO     | [data] control thread has finished
[2026-01-31 09:56:06] 2026-01-31 09:55:06,588 | INFO     | [job] job monitor thread has finished
[2026-01-31 09:56:06] 2026-01-31 09:55:06,596 | INFO     | [payload] control thread has finished
[2026-01-31 09:56:06] 2026-01-31 09:55:06,600 | INFO     | [payload] validate_post thread has finished
[2026-01-31 09:56:06] 2026-01-31 09:55:06,616 | INFO     | [data] copytool_out thread has finished
[2026-01-31 09:56:06] 2026-01-31 09:55:06,628 | INFO     | [job] validate thread has finished
[2026-01-31 09:56:06] 2026-01-31 09:55:06,992 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-31 09:56:06] 2026-01-31 09:55:07,048 | INFO     | [payload] execute_payloads thread has finished
[2026-01-31 09:56:06] 2026-01-31 09:55:07,112 | INFO     | [job] create_data_payload thread has finished
[2026-01-31 09:56:06] 2026-01-31 09:55:07,112 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-31 09:56:06] 2026-01-31 09:55:08,116 | INFO     | [job] queue monitor thread has finished
[2026-01-31 09:56:06] 2026-01-31 09:55:11,008 | INFO     | [data] queue_monitor thread has finished
[2026-01-31 09:56:06] 2026-01-31 09:55:34,048 | INFO     | PID=722000 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-31 09:56:06] 2026-01-31 09:55:34,048 | INFO     | .. there are 2 such processes running
[2026-01-31 09:56:06] 2026-01-31 09:55:34,049 | INFO     | found 0 job(s) in 20 queues
[2026-01-31 09:56:06] 2026-01-31 09:55:34,049 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-31 09:56:06] 2026-01-31 09:55:34,049 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-31 09:56:06] 2026-01-31 09:56:00,088 | INFO     | [monitor] cgroup control has ended
[2026-01-31 09:56:06] 2026-01-31 09:56:00,552 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140122891351872)>', '<ExcThread(monitor, started 140122234287872)>']
[2026-01-31 09:56:06] 2026-01-31 09:56:01,160 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-31 09:56:06] 2026-01-31 09:56:01,160 | INFO     | [monitor] control thread has ended
[2026-01-31 09:56:06] 2026-01-31 09:56:05,576 | INFO     | all workflow threads have been joined
[2026-01-31 09:56:06] 2026-01-31 09:56:05,576 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-31 09:56:06] 2026-01-31 09:56:05,576 | INFO     | traces error code: 0
[2026-01-31 09:56:06] 2026-01-31 09:56:05,578 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-31 09:56:06] 2026-01-31 09:56:05,879 [wrapper] ==== pilot stdout END ====
[2026-01-31 09:56:06] 2026-01-31 09:56:05,906 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-31 09:56:06] 2026-01-31 09:56:05,921 [wrapper] pilotpid: 722000
[2026-01-31 09:56:06] 2026-01-31 09:56:05,937 [wrapper] Pilot exit status: 0
[2026-01-31 09:56:06] 2026-01-31 09:56:06,036 [wrapper] pandaids: 6984628924
[2026-01-31 09:56:06] 2026-01-31 09:56:06,104 [wrapper] cleanup supervisor_pilot  746305 722001
[2026-01-31 09:56:06] 2026-01-31 09:56:06,117 [wrapper] Test setup, not cleaning
[2026-01-31 09:56:06] 2026-01-31 09:56:06,130 [wrapper] apfmon messages muted
[2026-01-31 09:56:06] 2026-01-31 09:56:06,143 [wrapper] ==== wrapper stdout END ====
[2026-01-31 09:56:06] 2026-01-31 09:56:06,200 [wrapper] ==== wrapper stderr END ====
[2026-01-31 09:56:06]  *** Error codes and diagnostics ***
[2026-01-31 09:56:06]     "exeErrorCode": 0,
[2026-01-31 09:56:06]     "exeErrorDiag": "",
[2026-01-31 09:56:06]     "pilotErrorCode": 0,
[2026-01-31 09:56:06]     "pilotErrorDiag": "",
[2026-01-31 09:56:06]  *** Listing of results directory ***
[2026-01-31 09:56:06] total 733856
[2026-01-31 09:56:06] -rw-r--r-- 1 boinc boinc    584422 Jan 28 12:08 pilot3.tar.gz
[2026-01-31 09:56:06] -rwx------ 1 boinc boinc     36322 Jan 28 12:12 runpilot2-wrapper.sh
[2026-01-31 09:56:06] -rw-r--r-- 1 boinc boinc      5111 Jan 28 12:16 queuedata.json
[2026-01-31 09:56:06] -rw-rw-r-- 1 boinc boinc       100 Jan 31 04:52 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-31 09:56:06] -rwxr-xr-x 1 boinc boinc      7986 Jan 31 04:52 run_atlas
[2026-01-31 09:56:06] -rw-rw-r-- 1 boinc boinc       105 Jan 31 04:52 job.xml
[2026-01-31 09:56:06] -rw-r--r-- 2 boinc boinc 536257214 Jan 31 04:52 EVNT.48317969._000049.pool.root.1
[2026-01-31 09:56:06] drwxrwx--x 2 boinc boinc      4096 Jan 31 04:52 shared
[2026-01-31 09:56:06] -rw-r--r-- 2 boinc boinc    597765 Jan 31 04:52 input.tar.gz
[2026-01-31 09:56:06] -rw-r--r-- 2 boinc boinc     15845 Jan 31 04:52 start_atlas.sh
[2026-01-31 09:56:06] -rw-rw-r-- 1 boinc boinc      9477 Jan 31 04:52 init_data.xml
[2026-01-31 09:56:06] -rw-rw-r-- 1 boinc boinc         0 Jan 31 04:52 boinc_setup_complete
[2026-01-31 09:56:06] -rw-rw-r-- 1 boinc boinc         0 Jan 31 04:52 boinc_lockfile
[2026-01-31 09:56:06] -rw-rw-r-- 1 boinc boinc      2513 Jan 31 04:52 pandaJob.out
[2026-01-31 09:56:06] -rw------- 1 boinc boinc   1010520 Jan 31 04:53 agis_schedconf.cvmfs.json
[2026-01-31 09:56:06] -rw------- 1 boinc boinc       419 Jan 31 04:54 workernode_map.json
[2026-01-31 09:56:06] drwx------ 5 boinc boinc      4096 Jan 31 04:54 pilot3
[2026-01-31 09:56:06] -rw------- 1 boinc boinc 204907078 Jan 31 09:53 HITS.48317971._001556.pool.root.1
[2026-01-31 09:56:06] -rw-rw-r-- 1 boinc boinc       531 Jan 31 09:53 boinc_task_state.xml
[2026-01-31 09:56:06] -rw------- 1 boinc boinc      1027 Jan 31 09:54 memory_monitor_summary.json
[2026-01-31 09:56:06] -rw------- 1 boinc boinc   1511668 Jan 31 09:54 agis_ddmendpoints.agis.ALL.json
[2026-01-31 09:56:06] -rw------- 1 boinc boinc    601924 Jan 31 09:54 log.48317971._001556.job.log.tgz.1
[2026-01-31 09:56:06] -rw------- 1 boinc boinc      6318 Jan 31 09:55 heartbeat.json
[2026-01-31 09:56:06] -rw------- 1 boinc boinc        95 Jan 31 09:55 pilot_heartbeat.json
[2026-01-31 09:56:06] -rw-rw-r-- 1 boinc boinc        28 Jan 31 09:55 wrapper_checkpoint.txt
[2026-01-31 09:56:06] -rw-rw-r-- 1 boinc boinc      8192 Jan 31 09:55 boinc_mmap_file
[2026-01-31 09:56:06] -rw------- 1 boinc boinc      4842 Jan 31 09:56 pilotlog.txt
[2026-01-31 09:56:06] -rw------- 1 boinc boinc   2579472 Jan 31 09:56 log.48317971._001556.job.log.1
[2026-01-31 09:56:06] -rw------- 1 boinc boinc       357 Jan 31 09:56 output.list
[2026-01-31 09:56:06] -rw-rw-r-- 1 boinc boinc       620 Jan 31 09:56 runtime_log
[2026-01-31 09:56:06] -rw------- 1 boinc boinc   3194880 Jan 31 09:56 result.tar.gz
[2026-01-31 09:56:06] -rw-rw-r-- 1 boinc boinc      9152 Jan 31 09:56 runtime_log.err
[2026-01-31 09:56:06] -rw------- 1 boinc boinc       653 Jan 31 09:56 PXWMDmiaJ58nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm3aFKDmGJ6cMm.diag
[2026-01-31 09:56:06] -rw-rw-r-- 1 boinc boinc     20854 Jan 31 09:56 stderr.txt
[2026-01-31 09:56:06] HITS file was successfully produced:
[2026-01-31 09:56:06] -rw------- 1 boinc boinc 204907078 Jan 31 09:53 shared/HITS.pool.root.1
[2026-01-31 09:56:06]  *** Contents of shared directory: ***
[2026-01-31 09:56:06] total 727528
[2026-01-31 09:56:06] -rw-r--r-- 2 boinc boinc 536257214 Jan 31 04:52 ATLAS.root_0
[2026-01-31 09:56:06] -rw-r--r-- 2 boinc boinc    597765 Jan 31 04:52 input.tar.gz
[2026-01-31 09:56:06] -rw-r--r-- 2 boinc boinc     15845 Jan 31 04:52 start_atlas.sh
[2026-01-31 09:56:06] -rw------- 1 boinc boinc 204907078 Jan 31 09:53 HITS.pool.root.1
[2026-01-31 09:56:06] -rw------- 1 boinc boinc   3194880 Jan 31 09:56 result.tar.gz
09:56:08 (717969): run_atlas exited; CPU time 35616.729230
09:56:08 (717969): called boinc_finish(0)

</stderr_txt>
]]>

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