Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:57:10 (27928): wrapper (7.7.26015): starting
22:57:10 (27928): wrapper: running run_atlas (--nthreads 8)
[2026-01-28 22:57:10] Arguments: --nthreads 8
[2026-01-28 22:57:10] Threads: 8
[2026-01-28 22:57:10] Checking for CVMFS
[2026-01-28 22:57:11] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-28 22:57:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-28 22:57:15] Running cvmfs_config stat atlas.cern.ch
[2026-01-28 22:57:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-28 22:57:17] 2.11.2.0 3780 63343 133000 155626 0 94 21355141 25165824 937 130560 0 21672703 99.847 12007532 3145 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-28 22:57:17] CVMFS is ok
[2026-01-28 22:57:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-28 22:57:17] Checking for apptainer binary...
[2026-01-28 22:57:17] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-28 22:57:17] Running /usr/bin/apptainer --version
[2026-01-28 22:57:17] apptainer version 1.3.2-1.el7
[2026-01-28 22:57:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-28 22:57:53] cg-vwn360.simple-grid.lan
[2026-01-28 22:57:53] apptainer works
[2026-01-28 22:57:53] Set ATHENA_PROC_NUMBER=8
[2026-01-28 22:57:53] Set ATHENA_CORE_NUMBER=8
[2026-01-28 22:57:53] Starting ATLAS job with PandaID=6984881952
[2026-01-28 22:57:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-29 03:58:40]  *** The last 200 lines of the pilot log: ***
[2026-01-29 03:58:40] 2026-01-29 02:57:38,606 | INFO     | job 6984881952 has finished - writing final server update
[2026-01-29 03:58:40] 2026-01-29 02:57:38,606 | INFO     | total number of processed events: 400 (read)
[2026-01-29 03:58:40] 2026-01-29 02:57:38,608 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6984881952/memory_monitor_summary.json (trf name=prmon)
[2026-01-29 03:58:40] 2026-01-29 02:57:38,609 | INFO     | extracted standard info from prmon json
[2026-01-29 03:58:40] 2026-01-29 02:57:38,609 | INFO     | extracted standard memory fields from prmon json
[2026-01-29 03:58:40] 2026-01-29 02:57:38,609 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-29 03:58:40] 2026-01-29 02:57:38,610 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-29 03:58:40] 2026-01-29 02:57:38,610 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-29 03:58:40] 2026-01-29 02:57:38,616 | INFO     | fitting pss+swap vs Time
[2026-01-29 03:58:40] 2026-01-29 02:57:38,617 | INFO     | sum of square deviations: 7102775035.0
[2026-01-29 03:58:40] 2026-01-29 02:57:38,619 | INFO     | sum of deviations: 205364165015.99997
[2026-01-29 03:58:40] 2026-01-29 02:57:38,620 | INFO     | mean x: 1769646766.5
[2026-01-29 03:58:40] 2026-01-29 02:57:38,620 | INFO     | mean y: 2709561.9225352113
[2026-01-29 03:58:40] 2026-01-29 02:57:38,620 | INFO     | intersect: -51163493617.07717
[2026-01-29 03:58:40] 2026-01-29 02:57:38,621 | INFO     | chi2: 8.081993269220943
[2026-01-29 03:58:40] 2026-01-29 02:57:38,621 | INFO     | sum of square deviations: 6734191380.0
[2026-01-29 03:58:40] 2026-01-29 02:57:38,624 | INFO     | sum of deviations: 221886930321.00003
[2026-01-29 03:58:40] 2026-01-29 02:57:38,624 | INFO     | mean x: 1769646614.0
[2026-01-29 03:58:40] 2026-01-29 02:57:38,624 | INFO     | mean y: 2716275.88172043
[2026-01-29 03:58:40] 2026-01-29 02:57:38,624 | INFO     | intersect: -58305910963.25262
[2026-01-29 03:58:40] 2026-01-29 02:57:38,625 | INFO     | chi2: 7.391112555122615
[2026-01-29 03:58:40] 2026-01-29 02:57:38,625 | INFO     | current chi2=7.391112555122615 (change=8.548395068942254 %)
[2026-01-29 03:58:40] 2026-01-29 02:57:38,625 | INFO     | right removable region: 278
[2026-01-29 03:58:40] 2026-01-29 02:57:38,626 | INFO     | sum of square deviations: 6734191380.0
[2026-01-29 03:58:40] 2026-01-29 02:57:38,628 | INFO     | sum of deviations: 95612516117.0
[2026-01-29 03:58:40] 2026-01-29 02:57:38,628 | INFO     | mean x: 1769646919.0
[2026-01-29 03:58:40] 2026-01-29 02:57:38,629 | INFO     | mean y: 2754947.813620072
[2026-01-29 03:58:40] 2026-01-29 02:57:38,629 | INFO     | intersect: -25122814703.62193
[2026-01-29 03:58:40] 2026-01-29 02:57:38,629 | INFO     | chi2: 3.238318216877705
[2026-01-29 03:58:40] 2026-01-29 02:57:38,629 | INFO     | current chi2=3.238318216877705 (change=59.93168876779008 %)
[2026-01-29 03:58:40] 2026-01-29 02:57:38,630 | INFO     | sum of square deviations: 6378584712.5
[2026-01-29 03:58:40] 2026-01-29 02:57:38,632 | INFO     | sum of deviations: 18405443929.0
[2026-01-29 03:58:40] 2026-01-29 02:57:38,633 | INFO     | mean x: 1769647071.5
[2026-01-29 03:58:40] 2026-01-29 02:57:38,633 | INFO     | mean y: 2787982.5109489053
[2026-01-29 03:58:40] 2026-01-29 02:57:38,633 | INFO     | intersect: -5103539113.02534
[2026-01-29 03:58:40] 2026-01-29 02:57:38,633 | INFO     | chi2: 0.9075209942598668
[2026-01-29 03:58:40] 2026-01-29 02:57:38,633 | INFO     | current chi2=0.9075209942598668 (change=71.97554614830679 %)
[2026-01-29 03:58:40] 2026-01-29 02:57:38,634 | INFO     | sum of square deviations: 6035722470.0
[2026-01-29 03:58:40] 2026-01-29 02:57:38,636 | INFO     | sum of deviations: -1528861605.0
[2026-01-29 03:58:40] 2026-01-29 02:57:38,636 | INFO     | mean x: 1769647224.0
[2026-01-29 03:58:40] 2026-01-29 02:57:38,637 | INFO     | mean y: 2796825.3457249072
[2026-01-29 03:58:40] 2026-01-29 02:57:38,637 | INFO     | intersect: 451052309.0290948
[2026-01-29 03:58:40] 2026-01-29 02:57:38,637 | INFO     | chi2: 0.7593955419131135
[2026-01-29 03:58:40] 2026-01-29 02:57:38,637 | INFO     | current chi2=0.7593955419131135 (change=16.3219862993426 %)
[2026-01-29 03:58:40] 2026-01-29 02:57:38,637 | INFO     | left removable region: 30
[2026-01-29 03:58:40] 2026-01-29 02:57:38,638 | INFO     | sum of square deviations: 4729621702.0
[2026-01-29 03:58:40] 2026-01-29 02:57:38,640 | INFO     | sum of deviations: 9873824688.5
[2026-01-29 03:58:40] 2026-01-29 02:57:38,640 | INFO     | mean x: 1769647498.5
[2026-01-29 03:58:40] 2026-01-29 02:57:38,640 | INFO     | mean y: 2809339.1975806453
[2026-01-29 03:58:40] 2026-01-29 02:57:38,641 | INFO     | intersect: -3691606464.341788
[2026-01-29 03:58:40] 2026-01-29 02:57:38,641 | INFO     | chi2: 0.0006663767600652126
[2026-01-29 03:58:40] 2026-01-29 02:57:38,641 | INFO     | current memory leak: 2.09 B/s (using 248 data points, chi2=0.00)
[2026-01-29 03:58:40] 2026-01-29 02:57:38,642 | INFO     | could have reported an average CPU frequency of 1999 MHz (13 samples)
[2026-01-29 03:58:40] 2026-01-29 02:57:38,642 | INFO     | ..............................
[2026-01-29 03:58:40] 2026-01-29 02:57:38,642 | INFO     | . Timing measurements:
[2026-01-29 03:58:40] 2026-01-29 02:57:38,642 | INFO     | . get job = 0 s
[2026-01-29 03:58:40] 2026-01-29 02:57:38,643 | INFO     | . initial setup = 122 s
[2026-01-29 03:58:40] 2026-01-29 02:57:38,643 | INFO     | . payload setup = 143 s
[2026-01-29 03:58:40] 2026-01-29 02:57:38,643 | INFO     | . stage-in = 0 s
[2026-01-29 03:58:40] 2026-01-29 02:57:38,643 | INFO     | . payload execution = 17450 s
[2026-01-29 03:58:40] 2026-01-29 02:57:38,643 | INFO     | . stage-out = 4 s
[2026-01-29 03:58:40] 2026-01-29 02:57:38,643 | INFO     | . log creation = 1 s
[2026-01-29 03:58:40] 2026-01-29 02:57:38,643 | INFO     | ..............................
[2026-01-29 03:58:40] 2026-01-29 02:57:38,790 | INFO     | 
[2026-01-29 03:58:40] 2026-01-29 02:57:38,791 | INFO     | job summary report
[2026-01-29 03:58:40] 2026-01-29 02:57:38,791 | INFO     | --------------------------------------------------
[2026-01-29 03:58:40] 2026-01-29 02:57:38,791 | INFO     | PanDA job id: 6984881952
[2026-01-29 03:58:40] 2026-01-29 02:57:38,791 | INFO     | task id: 48317971
[2026-01-29 03:58:40] 2026-01-29 02:57:38,791 | INFO     | errors: (none)
[2026-01-29 03:58:40] 2026-01-29 02:57:38,791 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-29 03:58:40] 2026-01-29 02:57:38,791 | INFO     | pilot state: finished 
[2026-01-29 03:58:40] 2026-01-29 02:57:38,791 | INFO     | transexitcode: 0
[2026-01-29 03:58:40] 2026-01-29 02:57:38,792 | INFO     | exeerrorcode: 0
[2026-01-29 03:58:40] 2026-01-29 02:57:38,792 | INFO     | exeerrordiag: 
[2026-01-29 03:58:40] 2026-01-29 02:57:38,792 | INFO     | exitcode: 0
[2026-01-29 03:58:40] 2026-01-29 02:57:38,792 | INFO     | exitmsg: OK
[2026-01-29 03:58:40] 2026-01-29 02:57:38,792 | INFO     | cpuconsumptiontime: 63866 s
[2026-01-29 03:58:40] 2026-01-29 02:57:38,792 | INFO     | nevents: 400
[2026-01-29 03:58:40] 2026-01-29 02:57:38,792 | INFO     | neventsw: 0
[2026-01-29 03:58:40] 2026-01-29 02:57:38,792 | INFO     | pid: 4097
[2026-01-29 03:58:40] 2026-01-29 02:57:38,792 | INFO     | pgrp: 4097
[2026-01-29 03:58:40] 2026-01-29 02:57:38,792 | INFO     | corecount: 8
[2026-01-29 03:58:40] 2026-01-29 02:57:38,793 | INFO     | event service: False
[2026-01-29 03:58:40] 2026-01-29 02:57:38,793 | INFO     | sizes: {0: 2283133, 1: 2284191, 2: 2284279, 13: 2284279, 17598: 2316518, 17603: 2325516, 17605: 2325700, 17606: 2325894}
[2026-01-29 03:58:40] 2026-01-29 02:57:38,793 | INFO     | --------------------------------------------------
[2026-01-29 03:58:40] 2026-01-29 02:57:38,793 | INFO     | 
[2026-01-29 03:58:40] 2026-01-29 02:57:38,793 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-01-29 03:58:40] 2026-01-29 02:57:38,920 | INFO     | time since job start (17619s) is within the limit (349056.0s)
[2026-01-29 03:58:40] 2026-01-29 02:57:39,220 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-29 03:58:40] 2026-01-29 02:57:39,220 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-29 03:58:40] 2026-01-29 02:57:39,220 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-29 03:58:40] 2026-01-29 02:57:39,220 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-29 03:58:40] 2026-01-29 02:57:39,221 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-29 03:58:40] 2026-01-29 02:57:39,221 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-29 03:58:40] 2026-01-29 02:57:39,221 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-29 03:58:40] 2026-01-29 02:57:39,221 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-29 03:58:40] 2026-01-29 02:57:39,221 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-29 03:58:40] 2026-01-29 02:57:39,221 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-29 03:58:40] 2026-01-29 02:57:39,221 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-29 03:58:40] 2026-01-29 02:57:39,221 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-29 03:58:40] 2026-01-29 02:57:39,221 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-29 03:58:40] 2026-01-29 02:57:39,222 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-29 03:58:40] 2026-01-29 02:57:39,222 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-29 03:58:40] 2026-01-29 02:57:39,222 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-29 03:58:40] 2026-01-29 02:57:39,222 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-29 03:58:40] 2026-01-29 02:57:39,222 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-29 03:58:40] 2026-01-29 02:57:39,222 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-29 03:58:40] 2026-01-29 02:57:39,222 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-29 03:58:40] 2026-01-29 02:57:39,222 | INFO     | job 6984881952 has completed (purged errors)
[2026-01-29 03:58:40] 2026-01-29 02:57:39,222 | INFO     | overall cleanup function is called
[2026-01-29 03:58:40] 2026-01-29 02:57:40,231 | INFO     | --- collectZombieJob: --- 10, [4097]
[2026-01-29 03:58:40] 2026-01-29 02:57:40,232 | INFO     | zombie collector waiting for pid 4097
[2026-01-29 03:58:40] 2026-01-29 02:57:40,232 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-29 03:58:40] 2026-01-29 02:57:40,232 | INFO     | collected zombie processes
[2026-01-29 03:58:40] 2026-01-29 02:57:40,232 | INFO     | will attempt to kill all subprocesses of pid=4097
[2026-01-29 03:58:40] 2026-01-29 02:57:40,317 | INFO     | process IDs to be killed: [4097] (in reverse order)
[2026-01-29 03:58:40] 2026-01-29 02:57:41,242 | WARNING  | found no corresponding commands to process id(s)
[2026-01-29 03:58:40] 2026-01-29 02:57:41,243 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-29 03:58:40] 2026-01-29 02:57:41,245 | INFO     | did not find any defunct processes belonging to 4097
[2026-01-29 03:58:40] 2026-01-29 02:57:41,247 | INFO     | did not find any defunct processes belonging to 4097
[2026-01-29 03:58:40] 2026-01-29 02:57:41,247 | INFO     | ready for new job
[2026-01-29 03:58:40] 2026-01-29 02:57:41,247 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-29 03:58:40] 2026-01-29 02:57:41,252 | INFO     | **************************************
[2026-01-29 03:58:40] 2026-01-29 02:57:41,252 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-29 03:58:40] 2026-01-29 02:57:41,252 | INFO     | **************************************
[2026-01-29 03:58:40] 2026-01-29 02:57:41,252 | INFO     | 
[2026-01-29 03:58:40] 2026-01-29 02:57:41,253 | INFO     | pilot is running in a VM
[2026-01-29 03:58:40] 2026-01-29 02:57:41,253 | INFO     | architecture information:
[2026-01-29 03:58:40] 2026-01-29 02:57:41,263 | INFO     | executing command: cat /etc/os-release
[2026-01-29 03:58:40] 2026-01-29 02:57:41,463 | INFO     | cat /etc/os-release:
[2026-01-29 03:58:40] NAME="CentOS Linux"
[2026-01-29 03:58:40] VERSION="7 (Core)"
[2026-01-29 03:58:40] ID="centos"
[2026-01-29 03:58:40] ID_LIKE="rhel fedora"
[2026-01-29 03:58:40] VERSION_ID="7"
[2026-01-29 03:58:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-29 03:58:40] ANSI_COLOR="0;31"
[2026-01-29 03:58:40] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-29 03:58:40] HOME_URL="https://www.centos.org/"
[2026-01-29 03:58:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-29 03:58:40] 
[2026-01-29 03:58:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-29 03:58:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-29 03:58:40] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-29 03:58:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-29 03:58:40] 
[2026-01-29 03:58:40] 2026-01-29 02:57:41,463 | INFO     | **************************************
[2026-01-29 03:58:40] 2026-01-29 02:57:41,967 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-01-29 03:58:40] 2026-01-29 02:57:42,139 | INFO     | sufficient remaining disk space (496091791360 B)
[2026-01-29 03:58:40] 2026-01-29 02:57:42,139 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-29 03:58:40] 2026-01-29 02:57:42,140 | INFO     | current server update state: UPDATING_FINAL
[2026-01-29 03:58:40] 2026-01-29 02:57:42,140 | INFO     | update_server=False
[2026-01-29 03:58:40] 2026-01-29 02:57:42,140 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-29 03:58:40] 2026-01-29 02:57:42,140 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-29 03:58:40] 2026-01-29 02:57:42,606 | INFO     | all data control threads have been joined
[2026-01-29 03:58:40] 2026-01-29 02:57:42,702 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-29 03:58:40] 2026-01-29 02:57:42,703 | INFO     | aborting loop
[2026-01-29 03:58:40] 2026-01-29 02:57:43,146 | INFO     | [job] retrieve thread has finished
[2026-01-29 03:58:40] 2026-01-29 02:57:43,233 | INFO     | [job] validate thread has finished
[2026-01-29 03:58:40] 2026-01-29 02:57:43,284 | INFO     | all payload control threads have been joined
[2026-01-29 03:58:40] 2026-01-29 02:57:43,438 | INFO     | all job control threads have been joined
[2026-01-29 03:58:40] 2026-01-29 02:57:43,498 | INFO     | [data] copytool_in thread has finished
[2026-01-29 03:58:40] 2026-01-29 02:57:43,612 | INFO     | [data] control thread has finished
[2026-01-29 03:58:40] 2026-01-29 02:57:43,709 | INFO     | [job] job monitor thread has finished
[2026-01-29 03:58:40] 2026-01-29 02:57:43,781 | INFO     | [payload] validate_post thread has finished
[2026-01-29 03:58:40] 2026-01-29 02:57:43,807 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-29 03:58:40] 2026-01-29 02:57:44,012 | INFO     | [job] create_data_payload thread has finished
[2026-01-29 03:58:40] 2026-01-29 02:57:44,147 | INFO     | [data] copytool_out thread has finished
[2026-01-29 03:58:40] 2026-01-29 02:57:44,290 | INFO     | [payload] control thread has finished
[2026-01-29 03:58:40] 2026-01-29 02:57:44,358 | INFO     | [payload] failed_post thread has finished
[2026-01-29 03:58:40] 2026-01-29 02:57:44,444 | INFO     | [job] control thread has finished
[2026-01-29 03:58:40] 2026-01-29 02:57:44,489 | INFO     | [payload] validate_pre thread has finished
[2026-01-29 03:58:40] 2026-01-29 02:57:44,490 | INFO     | [payload] execute_payloads thread has finished
[2026-01-29 03:58:40] 2026-01-29 02:57:44,512 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-29 03:58:40] 2026-01-29 02:57:44,618 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-29 03:58:40] 2026-01-29 02:57:44,813 | INFO     | [job] queue monitor thread has finished
[2026-01-29 03:58:40] 2026-01-29 02:57:48,625 | INFO     | [data] queue_monitor thread has finished
[2026-01-29 03:58:40] 2026-01-29 02:58:12,038 | INFO     | PID=32003 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-29 03:58:40] 2026-01-29 02:58:12,038 | INFO     | .. there are 2 such processes running
[2026-01-29 03:58:40] 2026-01-29 02:58:12,039 | INFO     | found 0 job(s) in 20 queues
[2026-01-29 03:58:40] 2026-01-29 02:58:12,039 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-29 03:58:40] 2026-01-29 02:58:12,039 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-29 03:58:40] 2026-01-29 02:58:29,308 | INFO     | [monitor] cgroup control has ended
[2026-01-29 03:58:40] 2026-01-29 02:58:30,582 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140615951238976)>', '<ExcThread(monitor, started 140615031428864)>']
[2026-01-29 03:58:40] 2026-01-29 02:58:31,154 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-29 03:58:40] 2026-01-29 02:58:31,155 | INFO     | [monitor] control thread has ended
[2026-01-29 03:58:40] 2026-01-29 02:58:35,608 | INFO     | all workflow threads have been joined
[2026-01-29 03:58:40] 2026-01-29 02:58:35,609 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-29 03:58:40] 2026-01-29 02:58:35,609 | INFO     | traces error code: 0
[2026-01-29 03:58:40] 2026-01-29 02:58:35,609 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-29 03:58:40] 2026-01-29 02:58:35,871 [wrapper] ==== pilot stdout END ====
[2026-01-29 03:58:40] 2026-01-29 02:58:35,976 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-29 03:58:40] 2026-01-29 02:58:36,068 [wrapper] pilotpid: 32003
[2026-01-29 03:58:40] 2026-01-29 02:58:36,098 [wrapper] Pilot exit status: 0
[2026-01-29 03:58:40] 2026-01-29 02:58:36,551 [wrapper] pandaids: 6984881952
[2026-01-29 03:58:40] 2026-01-29 02:58:37,670 [wrapper] cleanup supervisor_pilot 11411 32004
[2026-01-29 03:58:40] 2026-01-29 02:58:37,781 [wrapper] Test setup, not cleaning
[2026-01-29 03:58:40] 2026-01-29 02:58:37,883 [wrapper] apfmon messages muted
[2026-01-29 03:58:40] 2026-01-29 02:58:37,990 [wrapper] ==== wrapper stdout END ====
[2026-01-29 03:58:40] 2026-01-29 02:58:38,093 [wrapper] ==== wrapper stderr END ====
[2026-01-29 03:58:40]  *** Error codes and diagnostics ***
[2026-01-29 03:58:40]     "exeErrorCode": 0,
[2026-01-29 03:58:40]     "exeErrorDiag": "",
[2026-01-29 03:58:40]     "pilotErrorCode": 0,
[2026-01-29 03:58:40]     "pilotErrorDiag": "",
[2026-01-29 03:58:40]  *** Listing of results directory ***
[2026-01-29 03:58:40] total 738556
[2026-01-29 03:58:40] -rwx------. 1 boinc boinc     36322 Jan 28 13:23 runpilot2-wrapper.sh
[2026-01-29 03:58:40] -rw-r--r--. 1 boinc boinc    584422 Jan 28 13:23 pilot3.tar.gz
[2026-01-29 03:58:40] -rw-r--r--. 1 boinc boinc      5111 Jan 28 13:26 queuedata.json
[2026-01-29 03:58:40] -rw-r--r--. 1 boinc boinc       100 Jan 28 22:57 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-29 03:58:40] -rwxr-xr-x. 1 boinc boinc      7986 Jan 28 22:57 run_atlas
[2026-01-29 03:58:40] -rw-r--r--. 1 boinc boinc       105 Jan 28 22:57 job.xml
[2026-01-29 03:58:40] -rw-r--r--. 2 boinc boinc 541161789 Jan 28 22:57 EVNT.48317969._000025.pool.root.1
[2026-01-29 03:58:40] -rw-r--r--. 1 boinc boinc      6390 Jan 28 22:57 init_data.xml
[2026-01-29 03:58:40] -rw-r--r--. 2 boinc boinc     15845 Jan 28 22:57 start_atlas.sh
[2026-01-29 03:58:40] drwxrwx--x. 2 boinc boinc        68 Jan 28 22:57 shared
[2026-01-29 03:58:40] -rw-r--r--. 2 boinc boinc    597759 Jan 28 22:57 input.tar.gz
[2026-01-29 03:58:40] -rw-r--r--. 1 boinc boinc         0 Jan 28 22:57 boinc_lockfile
[2026-01-29 03:58:40] -rw-r--r--. 1 boinc boinc      2513 Jan 28 22:57 pandaJob.out
[2026-01-29 03:58:40] -rw-------. 1 boinc boinc       415 Jan 28 23:03 workernode_map.json
[2026-01-29 03:58:40] -rw-------. 1 boinc boinc   1005755 Jan 28 23:03 agis_schedconf.cvmfs.json
[2026-01-29 03:58:40] drwx------. 5 boinc boinc      4096 Jan 28 23:04 pilot3
[2026-01-29 03:58:40] -rw-------. 1 boinc boinc 205151557 Jan 29 03:56 HITS.48317971._002008.pool.root.1
[2026-01-29 03:58:40] -rw-r--r--. 1 boinc boinc       531 Jan 29 03:56 boinc_task_state.xml
[2026-01-29 03:58:40] -rw-------. 1 boinc boinc      1014 Jan 29 03:57 memory_monitor_summary.json
[2026-01-29 03:58:40] -rw-------. 1 boinc boinc   1516246 Jan 29 03:57 agis_ddmendpoints.agis.ALL.json
[2026-01-29 03:58:40] -rw-------. 1 boinc boinc    544390 Jan 29 03:57 log.48317971._002008.job.log.tgz.1
[2026-01-29 03:58:40] -rw-------. 1 boinc boinc      6315 Jan 29 03:57 heartbeat.json
[2026-01-29 03:58:40] -rw-------. 1 boinc boinc        95 Jan 29 03:58 pilot_heartbeat.json
[2026-01-29 03:58:40] -rw-r--r--. 1 boinc boinc      8192 Jan 29 03:58 boinc_mmap_file
[2026-01-29 03:58:40] -rw-r--r--. 1 boinc boinc        28 Jan 29 03:58 wrapper_checkpoint.txt
[2026-01-29 03:58:40] -rw-------. 1 boinc boinc      4880 Jan 29 03:58 pilotlog.txt
[2026-01-29 03:58:40] -rw-------. 1 boinc boinc   2475655 Jan 29 03:58 log.48317971._002008.job.log.1
[2026-01-29 03:58:40] -rw-------. 1 boinc boinc       357 Jan 29 03:58 output.list
[2026-01-29 03:58:40] -rw-r--r--. 1 boinc boinc       620 Jan 29 03:58 runtime_log
[2026-01-29 03:58:40] -rw-------. 1 boinc boinc   3041280 Jan 29 03:58 result.tar.gz
[2026-01-29 03:58:40] -rw-r--r--. 1 boinc boinc      8816 Jan 29 03:58 runtime_log.err
[2026-01-29 03:58:40] -rw-------. 1 boinc boinc       655 Jan 29 03:58 4auMDmIlJ58n9Rq4apOajLDm4fhM0noT9bVooX4SDmToFKDm4bg7mn.diag
[2026-01-29 03:58:40] -rw-r--r--. 1 boinc boinc     20706 Jan 29 03:58 stderr.txt
[2026-01-29 03:58:40] HITS file was successfully produced:
[2026-01-29 03:58:40] -rw-------. 1 boinc boinc 205151557 Jan 29 03:56 shared/HITS.pool.root.1
[2026-01-29 03:58:40]  *** Contents of shared directory: ***
[2026-01-29 03:58:40] total 732396
[2026-01-29 03:58:40] -rw-r--r--. 2 boinc boinc 541161789 Jan 28 22:57 ATLAS.root_0
[2026-01-29 03:58:40] -rw-r--r--. 2 boinc boinc     15845 Jan 28 22:57 start_atlas.sh
[2026-01-29 03:58:40] -rw-r--r--. 2 boinc boinc    597759 Jan 28 22:57 input.tar.gz
[2026-01-29 03:58:40] -rw-------. 1 boinc boinc 205151557 Jan 29 03:56 HITS.pool.root.1
[2026-01-29 03:58:40] -rw-------. 1 boinc boinc   3041280 Jan 29 03:58 result.tar.gz
03:58:41 (27928): run_atlas exited; CPU time 64056.742992
03:58:41 (27928): called boinc_finish(0)

</stderr_txt>
]]>

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