Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:33:37 (17007): wrapper (7.7.26015): starting
09:33:37 (17007): wrapper: running run_atlas (--nthreads 12)
[2026-01-28 09:33:37] Arguments: --nthreads 12
[2026-01-28 09:33:37] Threads: 12
[2026-01-28 09:33:37] Checking for CVMFS
[2026-01-28 09:33:37] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-28 09:33:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-28 09:33:37] Running cvmfs_config stat atlas.cern.ch
[2026-01-28 09:33:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-28 09:33:37] 2.11.2.0 2925 378527 98836 155622 2 188 16946298 20275201 1 130560 1 161233124 99.950 22965623 17050 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-28 09:33:37] CVMFS is ok
[2026-01-28 09:33:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-28 09:33:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-28 09:33:37] Further information can be found at the LHC@home message board.
[2026-01-28 09:33:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-28 09:33:37] Checking for apptainer binary...
[2026-01-28 09:33:37] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-28 09:33:37] Running /usr/bin/apptainer --version
[2026-01-28 09:33:37] apptainer version 1.3.2-1.el7
[2026-01-28 09:33:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-28 09:33:39] c-205-9.aglt2.org
[2026-01-28 09:33:39] apptainer works
[2026-01-28 09:33:39] Set ATHENA_PROC_NUMBER=12
[2026-01-28 09:33:39] Set ATHENA_CORE_NUMBER=12
[2026-01-28 09:33:39] Starting ATLAS job with PandaID=6985072879
[2026-01-28 09:33:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-28 10:51:27]  *** The last 200 lines of the pilot log: ***
[2026-01-28 10:51:27]  guid=9301cf3d-9ba7-4af2-add3-401d88bb4355
[2026-01-28 10:51:27]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-01-28 10:51:27]  is_altstaged=None
[2026-01-28 10:51:27]  is_tar=False
[2026-01-28 10:51:27]  lfn=log.48317872._004254.job.log.tgz.1
[2026-01-28 10:51:27]  mtime=0
[2026-01-28 10:51:27]  protocol_id=None
[2026-01-28 10:51:27]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-28 10:51:27]  replicas=None
[2026-01-28 10:51:27]  scope=mc23_13p6TeV
[2026-01-28 10:51:27]  status=None
[2026-01-28 10:51:27]  status_code=0
[2026-01-28 10:51:27]  storage_token=
[2026-01-28 10:51:27]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6985072879/log.48317872._004254.job.log.tgz.1
[2026-01-28 10:51:27]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/df/fd/log.48317872._004254.job.log.tgz.1
[2026-01-28 10:51:27]  workdir=None
[2026-01-28 10:51:27] ]
[2026-01-28 10:51:27] 2026-01-28 15:50:51,598 | INFO     | transferring file log.48317872._004254.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6985072879/log.48317872._004254.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-28 10:51:27] 2026-01-28 15:50:51,598 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6985072879/log.48317872._004254.job.log.tgz.1 /tmp/boinchome/slots/0/log.48317872._004254.job
[2026-01-28 10:51:27] 2026-01-28 15:50:51,620 | INFO     | adding to output.list: log.48317872._004254.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/df/fd/log.48317872._004254.job.log.tg
[2026-01-28 10:51:27] 2026-01-28 15:50:51,621 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-28 10:51:27] 2026-01-28 15:50:51,621 | INFO     | summary of transferred files:
[2026-01-28 10:51:27] 2026-01-28 15:50:51,621 | INFO     |  -- lfn=log.48317872._004254.job.log.tgz.1, status_code=0, status=transferred
[2026-01-28 10:51:27] 2026-01-28 15:50:51,622 | INFO     | stage-out finished correctly
[2026-01-28 10:51:27] 2026-01-28 15:50:51,705 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-28 10:51:27] 2026-01-28 15:50:51,719 | INFO     | time since job start (4612s) is within the limit (349056.0s)
[2026-01-28 10:51:27] 2026-01-28 15:50:53,730 | INFO     | time since job start (4614s) is within the limit (349056.0s)
[2026-01-28 10:51:27] 2026-01-28 15:50:54,433 | INFO     | job 6985072879 has state=finished
[2026-01-28 10:51:27] 2026-01-28 15:50:54,433 | INFO     | preparing for final server update for job 6985072879 in state='finished'
[2026-01-28 10:51:27] 2026-01-28 15:50:54,434 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-6985072879/jobReport.json
[2026-01-28 10:51:27] 2026-01-28 15:50:54,436 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-01-28 10:51:27] 2026-01-28 15:50:54,437 | INFO     | this job has now completed (state=finished)
[2026-01-28 10:51:27] 2026-01-28 15:50:54,437 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-28 10:51:27] 2026-01-28 15:50:54,437 | INFO     | log transfer has been attempted: DONE
[2026-01-28 10:51:27] 2026-01-28 15:50:54,438 | INFO     | job 6985072879 has finished - writing final server update
[2026-01-28 10:51:27] 2026-01-28 15:50:54,438 | INFO     | total number of processed events: 400 (read)
[2026-01-28 10:51:27] 2026-01-28 15:50:54,440 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6985072879/memory_monitor_summary.json (trf name=prmon)
[2026-01-28 10:51:27] 2026-01-28 15:50:54,440 | INFO     | extracted standard info from prmon json
[2026-01-28 10:51:27] 2026-01-28 15:50:54,441 | INFO     | extracted standard memory fields from prmon json
[2026-01-28 10:51:27] 2026-01-28 15:50:54,441 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-28 10:51:27] 2026-01-28 15:50:54,441 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-28 10:51:27] 2026-01-28 15:50:54,441 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-28 10:51:27] 2026-01-28 15:50:54,442 | INFO     | fitting pss+swap vs Time
[2026-01-28 10:51:27] 2026-01-28 15:50:54,443 | INFO     | sum of square deviations: 101843770.0
[2026-01-28 10:51:27] 2026-01-28 15:50:54,443 | INFO     | sum of deviations: 1617325452.0
[2026-01-28 10:51:27] 2026-01-28 15:50:54,443 | INFO     | mean x: 1769613242.0
[2026-01-28 10:51:27] 2026-01-28 15:50:54,443 | INFO     | mean y: 2964200.275362319
[2026-01-28 10:51:27] 2026-01-28 15:50:54,443 | INFO     | intersect: -28099300047.04026
[2026-01-28 10:51:27] 2026-01-28 15:50:54,443 | INFO     | chi2: 0.002179557039442071
[2026-01-28 10:51:27] 2026-01-28 15:50:54,444 | INFO     | current memory leak: 15.88 B/s (using 69 data points, chi2=0.00)
[2026-01-28 10:51:27] 2026-01-28 15:50:54,444 | INFO     | could have reported an average CPU frequency of 1795 MHz (6 samples)
[2026-01-28 10:51:27] 2026-01-28 15:50:54,444 | INFO     | ..............................
[2026-01-28 10:51:27] 2026-01-28 15:50:54,444 | INFO     | . Timing measurements:
[2026-01-28 10:51:27] 2026-01-28 15:50:54,444 | INFO     | . get job = 0 s
[2026-01-28 10:51:27] 2026-01-28 15:50:54,444 | INFO     | . initial setup = 7 s
[2026-01-28 10:51:27] 2026-01-28 15:50:54,444 | INFO     | . payload setup = 7 s
[2026-01-28 10:51:27] 2026-01-28 15:50:54,445 | INFO     | . stage-in = 0 s
[2026-01-28 10:51:27] 2026-01-28 15:50:54,445 | INFO     | . payload execution = 4589 s
[2026-01-28 10:51:27] 2026-01-28 15:50:54,445 | INFO     | . stage-out = 0 s
[2026-01-28 10:51:27] 2026-01-28 15:50:54,445 | INFO     | . log creation = 0 s
[2026-01-28 10:51:27] 2026-01-28 15:50:54,445 | INFO     | ..............................
[2026-01-28 10:51:27] 2026-01-28 15:50:54,582 | INFO     | 
[2026-01-28 10:51:27] 2026-01-28 15:50:54,582 | INFO     | job summary report
[2026-01-28 10:51:27] 2026-01-28 15:50:54,582 | INFO     | --------------------------------------------------
[2026-01-28 10:51:27] 2026-01-28 15:50:54,582 | INFO     | PanDA job id: 6985072879
[2026-01-28 10:51:27] 2026-01-28 15:50:54,582 | INFO     | task id: 48317872
[2026-01-28 10:51:27] 2026-01-28 15:50:54,583 | INFO     | errors: (none)
[2026-01-28 10:51:27] 2026-01-28 15:50:54,583 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-28 10:51:27] 2026-01-28 15:50:54,583 | INFO     | pilot state: finished 
[2026-01-28 10:51:27] 2026-01-28 15:50:54,583 | INFO     | transexitcode: 0
[2026-01-28 10:51:27] 2026-01-28 15:50:54,583 | INFO     | exeerrorcode: 0
[2026-01-28 10:51:27] 2026-01-28 15:50:54,583 | INFO     | exeerrordiag: 
[2026-01-28 10:51:27] 2026-01-28 15:50:54,584 | INFO     | exitcode: 0
[2026-01-28 10:51:27] 2026-01-28 15:50:54,584 | INFO     | exitmsg: OK
[2026-01-28 10:51:27] 2026-01-28 15:50:54,584 | INFO     | cpuconsumptiontime: 50265 s
[2026-01-28 10:51:27] 2026-01-28 15:50:54,584 | INFO     | nevents: 400
[2026-01-28 10:51:27] 2026-01-28 15:50:54,584 | INFO     | neventsw: 0
[2026-01-28 10:51:27] 2026-01-28 15:50:54,584 | INFO     | pid: 27034
[2026-01-28 10:51:27] 2026-01-28 15:50:54,585 | INFO     | pgrp: 27034
[2026-01-28 10:51:27] 2026-01-28 15:50:54,585 | INFO     | corecount: 12
[2026-01-28 10:51:27] 2026-01-28 15:50:54,585 | INFO     | event service: False
[2026-01-28 10:51:27] 2026-01-28 15:50:54,585 | INFO     | sizes: {0: 2284028, 1: 2284234, 11: 2284262, 4600: 2310391, 4601: 2319445, 4604: 2319583}
[2026-01-28 10:51:27] 2026-01-28 15:50:54,585 | INFO     | --------------------------------------------------
[2026-01-28 10:51:27] 2026-01-28 15:50:54,585 | INFO     | 
[2026-01-28 10:51:27] 2026-01-28 15:50:54,586 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-28 10:51:27] 2026-01-28 15:50:54,612 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-28 10:51:27] 2026-01-28 15:50:54,613 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-28 10:51:27] 2026-01-28 15:50:54,613 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-28 10:51:27] 2026-01-28 15:50:54,613 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-28 10:51:27] 2026-01-28 15:50:54,613 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-28 10:51:27] 2026-01-28 15:50:54,613 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-28 10:51:27] 2026-01-28 15:50:54,614 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-28 10:51:27] 2026-01-28 15:50:54,614 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-28 10:51:27] 2026-01-28 15:50:54,614 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-28 10:51:27] 2026-01-28 15:50:54,614 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-28 10:51:27] 2026-01-28 15:50:54,614 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-28 10:51:27] 2026-01-28 15:50:54,615 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-28 10:51:27] 2026-01-28 15:50:54,615 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-28 10:51:27] 2026-01-28 15:50:54,615 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-28 10:51:27] 2026-01-28 15:50:54,615 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-28 10:51:27] 2026-01-28 15:50:54,615 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-28 10:51:27] 2026-01-28 15:50:54,616 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-28 10:51:27] 2026-01-28 15:50:54,616 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-28 10:51:27] 2026-01-28 15:50:54,616 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-28 10:51:27] 2026-01-28 15:50:54,616 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-28 10:51:27] 2026-01-28 15:50:54,616 | INFO     | job 6985072879 has completed (purged errors)
[2026-01-28 10:51:27] 2026-01-28 15:50:54,616 | INFO     | overall cleanup function is called
[2026-01-28 10:51:27] 2026-01-28 15:50:55,625 | INFO     | --- collectZombieJob: --- 10, [27034]
[2026-01-28 10:51:27] 2026-01-28 15:50:55,625 | INFO     | zombie collector waiting for pid 27034
[2026-01-28 10:51:27] 2026-01-28 15:50:55,625 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-28 10:51:27] 2026-01-28 15:50:55,625 | INFO     | collected zombie processes
[2026-01-28 10:51:27] 2026-01-28 15:50:55,625 | INFO     | will attempt to kill all subprocesses of pid=27034
[2026-01-28 10:51:27] 2026-01-28 15:50:55,714 | INFO     | process IDs to be killed: [27034] (in reverse order)
[2026-01-28 10:51:27] 2026-01-28 15:50:55,765 | WARNING  | found no corresponding commands to process id(s)
[2026-01-28 10:51:27] 2026-01-28 15:50:55,765 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-28 10:51:27] 2026-01-28 15:50:55,772 | INFO     | did not find any defunct processes belonging to 27034
[2026-01-28 10:51:27] 2026-01-28 15:50:55,776 | INFO     | did not find any defunct processes belonging to 27034
[2026-01-28 10:51:27] 2026-01-28 15:50:55,776 | INFO     | ready for new job
[2026-01-28 10:51:27] 2026-01-28 15:50:55,776 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-28 10:51:27] 2026-01-28 15:50:55,778 | INFO     | **************************************
[2026-01-28 10:51:27] 2026-01-28 15:50:55,778 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-28 10:51:27] 2026-01-28 15:50:55,778 | INFO     | **************************************
[2026-01-28 10:51:27] 2026-01-28 15:50:55,778 | INFO     | 
[2026-01-28 10:51:27] 2026-01-28 15:50:55,779 | INFO     | architecture information:
[2026-01-28 10:51:27] 2026-01-28 15:50:55,780 | INFO     | executing command: cat /etc/os-release
[2026-01-28 10:51:27] 2026-01-28 15:50:55,794 | INFO     | cat /etc/os-release:
[2026-01-28 10:51:27] NAME="CentOS Linux"
[2026-01-28 10:51:27] VERSION="7 (Core)"
[2026-01-28 10:51:27] ID="centos"
[2026-01-28 10:51:27] ID_LIKE="rhel fedora"
[2026-01-28 10:51:27] VERSION_ID="7"
[2026-01-28 10:51:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-28 10:51:27] ANSI_COLOR="0;31"
[2026-01-28 10:51:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-28 10:51:27] HOME_URL="https://www.centos.org/"
[2026-01-28 10:51:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-28 10:51:27] 
[2026-01-28 10:51:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-28 10:51:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-28 10:51:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-28 10:51:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-28 10:51:27] 
[2026-01-28 10:51:27] 2026-01-28 15:50:55,795 | INFO     | **************************************
[2026-01-28 10:51:27] 2026-01-28 15:50:55,826 | WARNING  | process 27034 can no longer be monitored (due to stat problems) - aborting
[2026-01-28 10:51:27] 2026-01-28 15:50:55,901 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-28 10:51:27] 2026-01-28 15:50:55,988 | INFO     | number of running child processes to parent process 27034: 1
[2026-01-28 10:51:27] 2026-01-28 15:50:55,988 | INFO     | maximum number of monitored processes: 6
[2026-01-28 10:51:27] 2026-01-28 15:50:55,988 | INFO     | aborting job monitoring since job object (job id=6985072879) has expired
[2026-01-28 10:51:27] 2026-01-28 15:50:56,298 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-28 10:51:27] 2026-01-28 15:50:56,315 | INFO     | sufficient remaining disk space (28800188416 B)
[2026-01-28 10:51:27] 2026-01-28 15:50:56,316 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-28 10:51:27] 2026-01-28 15:50:56,316 | INFO     | current server update state: UPDATING_FINAL
[2026-01-28 10:51:27] 2026-01-28 15:50:56,316 | INFO     | update_server=False
[2026-01-28 10:51:27] 2026-01-28 15:50:56,316 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-28 10:51:27] 2026-01-28 15:50:56,316 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-28 10:51:27] 2026-01-28 15:50:56,317 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-28 10:51:27] 2026-01-28 15:50:56,317 | INFO     | will abort loop
[2026-01-28 10:51:27] 2026-01-28 15:50:56,824 | INFO     | all data control threads have been joined
[2026-01-28 10:51:27] 2026-01-28 15:50:56,884 | INFO     | all payload control threads have been joined
[2026-01-28 10:51:27] 2026-01-28 15:50:56,970 | INFO     | all job control threads have been joined
[2026-01-28 10:51:27] 2026-01-28 15:50:57,213 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-28 10:51:27] 2026-01-28 15:50:57,322 | INFO     | [job] retrieve thread has finished
[2026-01-28 10:51:27] 2026-01-28 15:50:57,322 | INFO     | [job] queue monitor thread has finished
[2026-01-28 10:51:27] 2026-01-28 15:50:57,323 | INFO     | [job] job monitor thread has finished
[2026-01-28 10:51:27] 2026-01-28 15:50:57,748 | INFO     | [payload] validate_pre thread has finished
[2026-01-28 10:51:27] 2026-01-28 15:50:57,789 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-28 10:51:27] 2026-01-28 15:50:57,801 | INFO     | [payload] execute_payloads thread has finished
[2026-01-28 10:51:27] 2026-01-28 15:50:57,807 | INFO     | [data] copytool_in thread has finished
[2026-01-28 10:51:27] 2026-01-28 15:50:57,825 | INFO     | [data] control thread has finished
[2026-01-28 10:51:27] 2026-01-28 15:50:57,890 | INFO     | [payload] control thread has finished
[2026-01-28 10:51:27] 2026-01-28 15:50:57,976 | INFO     | [job] control thread has finished
[2026-01-28 10:51:27] 2026-01-28 15:50:58,265 | INFO     | [payload] failed_post thread has finished
[2026-01-28 10:51:27] 2026-01-28 15:50:58,281 | INFO     | [payload] validate_post thread has finished
[2026-01-28 10:51:27] 2026-01-28 15:50:58,629 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-28 10:51:27] 2026-01-28 15:50:58,669 | INFO     | [job] validate thread has finished
[2026-01-28 10:51:27] 2026-01-28 15:50:58,813 | INFO     | [job] create_data_payload thread has finished
[2026-01-28 10:51:27] 2026-01-28 15:50:59,219 | INFO     | [data] copytool_out thread has finished
[2026-01-28 10:51:27] 2026-01-28 15:51:01,795 | INFO     | [data] queue_monitor thread has finished
[2026-01-28 10:51:27] 2026-01-28 15:51:06,400 | INFO     | [monitor] cgroup control has ended
[2026-01-28 10:51:27] 2026-01-28 15:51:06,868 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139639803791168)>', '<ExcThread(monitor, started 139638773638912)>']
[2026-01-28 10:51:27] 2026-01-28 15:51:11,888 | INFO     | all workflow threads have been joined
[2026-01-28 10:51:27] 2026-01-28 15:51:11,901 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-28 10:51:27] 2026-01-28 15:51:11,902 | INFO     | traces error code: 0
[2026-01-28 10:51:27] 2026-01-28 15:51:11,904 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-28 10:51:27] 2026-01-28 15:51:26,937 | INFO     | PID=21007 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-28 10:51:27] 2026-01-28 15:51:26,938 | INFO     | found 0 job(s) in 20 queues
[2026-01-28 10:51:27] 2026-01-28 15:51:26,938 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-28 10:51:27] 2026-01-28 15:51:26,938 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-28 10:51:27] 2026-01-28 15:51:26,938 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-28 10:51:27] 2026-01-28 15:51:26,938 | INFO     | [monitor] control thread has ended
[2026-01-28 10:51:27] 2026-01-28 15:51:27,041 [wrapper] ==== pilot stdout END ====
[2026-01-28 10:51:27] 2026-01-28 15:51:27,045 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-28 10:51:27] 2026-01-28 15:51:27,048 [wrapper] pilotpid: 21007
[2026-01-28 10:51:27] 2026-01-28 15:51:27,052 [wrapper] Pilot exit status: 0
[2026-01-28 10:51:27] 2026-01-28 15:51:27,068 [wrapper] pandaids: 6985072879
[2026-01-28 10:51:27] 2026-01-28 15:51:27,111 [wrapper] cleanup supervisor_pilot 17517 21008
[2026-01-28 10:51:27] 2026-01-28 15:51:27,115 [wrapper] Test setup, not cleaning
[2026-01-28 10:51:27] 2026-01-28 15:51:27,118 [wrapper] apfmon messages muted
[2026-01-28 10:51:27] 2026-01-28 15:51:27,122 [wrapper] ==== wrapper stdout END ====
[2026-01-28 10:51:27] 2026-01-28 15:51:27,126 [wrapper] ==== wrapper stderr END ====
[2026-01-28 10:51:27]  *** Error codes and diagnostics ***
[2026-01-28 10:51:27]     "exeErrorCode": 0,
[2026-01-28 10:51:27]     "exeErrorDiag": "",
[2026-01-28 10:51:27]     "pilotErrorCode": 0,
[2026-01-28 10:51:27]     "pilotErrorDiag": "",
[2026-01-28 10:51:27]  *** Listing of results directory ***
[2026-01-28 10:51:27] total 672624
[2026-01-28 10:51:27] -rwx------ 1 boincer umatlas     36322 Jan 28 07:23 runpilot2-wrapper.sh
[2026-01-28 10:51:27] -rw-r--r-- 1 boincer umatlas    584422 Jan 28 07:23 pilot3.tar.gz
[2026-01-28 10:51:27] -rw-r--r-- 1 boincer umatlas      5111 Jan 28 07:26 queuedata.json
[2026-01-28 10:51:27] -rw-r--r-- 1 boincer umatlas       100 Jan 28 09:33 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-28 10:51:27] -rwxr-xr-x 1 boincer umatlas      7986 Jan 28 09:33 run_atlas
[2026-01-28 10:51:27] -rw-r--r-- 1 boincer umatlas       105 Jan 28 09:33 job.xml
[2026-01-28 10:51:27] -rw-r--r-- 2 boincer umatlas 494377359 Jan 28 09:33 EVNT.48317869._000085.pool.root.1
[2026-01-28 10:51:27] -rw-r--r-- 2 boincer umatlas     15845 Jan 28 09:33 start_atlas.sh
[2026-01-28 10:51:27] drwxrwx--x 2 boincer umatlas      4096 Jan 28 09:33 shared
[2026-01-28 10:51:27] -rw-r--r-- 2 boincer umatlas    597757 Jan 28 09:33 input.tar.gz
[2026-01-28 10:51:27] -rw-r--r-- 1 boincer umatlas         0 Jan 28 09:33 boinc_lockfile
[2026-01-28 10:51:27] -rw-r--r-- 1 boincer umatlas      2515 Jan 28 09:33 pandaJob.out
[2026-01-28 10:51:27] -rw------- 1 boincer umatlas        57 Jan 28 09:33 setup.sh.local
[2026-01-28 10:51:27] -rw------- 1 boincer umatlas   1005192 Jan 28 09:33 agis_schedconf.cvmfs.json
[2026-01-28 10:51:27] -rw------- 1 boincer umatlas   1516246 Jan 28 09:33 agis_ddmendpoints.agis.ALL.json
[2026-01-28 10:51:27] -rw------- 1 boincer umatlas       444 Jan 28 09:33 workernode_map.json
[2026-01-28 10:51:27] drwx------ 5 boincer umatlas      4096 Jan 28 09:33 pilot3
[2026-01-28 10:51:27] -rw-r--r-- 1 boincer umatlas      5952 Jan 28 10:49 init_data.xml
[2026-01-28 10:51:27] -rw------- 1 boincer umatlas 188295006 Jan 28 10:50 HITS.48317872._004254.pool.root.1
[2026-01-28 10:51:27] -rw-r--r-- 1 boincer umatlas       530 Jan 28 10:50 boinc_task_state.xml
[2026-01-28 10:51:27] -rw------- 1 boincer umatlas      1040 Jan 28 10:50 memory_monitor_summary.json
[2026-01-28 10:51:27] -rw------- 1 boincer umatlas    409435 Jan 28 10:50 log.48317872._004254.job.log.tgz.1
[2026-01-28 10:51:27] -rw------- 1 boincer umatlas      6419 Jan 28 10:50 heartbeat.json
[2026-01-28 10:51:27] -rw-r--r-- 1 boincer umatlas      8192 Jan 28 10:51 boinc_mmap_file
[2026-01-28 10:51:27] -rw-r--r-- 1 boincer umatlas        27 Jan 28 10:51 wrapper_checkpoint.txt
[2026-01-28 10:51:27] -rw------- 1 boincer umatlas        95 Jan 28 10:51 pilot_heartbeat.json
[2026-01-28 10:51:27] -rw------- 1 boincer umatlas       745 Jan 28 10:51 pilotlog.txt
[2026-01-28 10:51:27] -rw------- 1 boincer umatlas    670558 Jan 28 10:51 log.48317872._004254.job.log.1
[2026-01-28 10:51:27] -rw------- 1 boincer umatlas       357 Jan 28 10:51 output.list
[2026-01-28 10:51:27] -rw-r--r-- 1 boincer umatlas       620 Jan 28 10:51 runtime_log
[2026-01-28 10:51:27] -rw------- 1 boincer umatlas   1095680 Jan 28 10:51 result.tar.gz
[2026-01-28 10:51:27] -rw-r--r-- 1 boincer umatlas      9338 Jan 28 10:51 runtime_log.err
[2026-01-28 10:51:27] -rw------- 1 boincer umatlas       655 Jan 28 10:51 04XMDmukJ58nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmRmFKDmD3eMrm.diag
[2026-01-28 10:51:27] -rw-r--r-- 1 boincer umatlas     21379 Jan 28 10:51 stderr.txt
[2026-01-28 10:51:27] HITS file was successfully produced:
[2026-01-28 10:51:27] -rw------- 1 boincer umatlas 188295006 Jan 28 10:50 shared/HITS.pool.root.1
[2026-01-28 10:51:27]  *** Contents of shared directory: ***
[2026-01-28 10:51:27] total 668352
[2026-01-28 10:51:27] -rw-r--r-- 2 boincer umatlas 494377359 Jan 28 09:33 ATLAS.root_0
[2026-01-28 10:51:27] -rw-r--r-- 2 boincer umatlas     15845 Jan 28 09:33 start_atlas.sh
[2026-01-28 10:51:27] -rw-r--r-- 2 boincer umatlas    597757 Jan 28 09:33 input.tar.gz
[2026-01-28 10:51:27] -rw------- 1 boincer umatlas 188295006 Jan 28 10:50 HITS.pool.root.1
[2026-01-28 10:51:27] -rw------- 1 boincer umatlas   1095680 Jan 28 10:51 result.tar.gz
10:51:29 (17007): run_atlas exited; CPU time 50251.014092
10:51:29 (17007): called boinc_finish(0)

</stderr_txt>
]]>

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