Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:41:27 (351955): wrapper (7.7.26015): starting
10:41:27 (351955): wrapper: running run_atlas (--nthreads 12)
[2026-01-28 10:41:27] Arguments: --nthreads 12
[2026-01-28 10:41:27] Threads: 12
[2026-01-28 10:41:27] Checking for CVMFS
[2026-01-28 10:41:28] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-28 10:41:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-28 10:41:28] Running cvmfs_config stat atlas.cern.ch
[2026-01-28 10:41:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-28 10:41:29] 2.11.5.0 2324609 84285 317560 155622 2 1240 38324307 45568001 19449 130560 0 441656861 99.780 290533290 17001 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2026-01-28 10:41:29] CVMFS is ok
[2026-01-28 10:41:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-28 10:41:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-28 10:41:29] Further information can be found at the LHC@home message board.
[2026-01-28 10:41:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-28 10:41:29] Checking for apptainer binary...
[2026-01-28 10:41:29] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-28 10:41:29] Running /usr/bin/apptainer --version
[2026-01-28 10:41:29] apptainer version 1.4.1-1.el9
[2026-01-28 10:41:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-28 10:41:30] wns0073.triumf.lcg
[2026-01-28 10:41:30] apptainer works
[2026-01-28 10:41:30] Set ATHENA_PROC_NUMBER=12
[2026-01-28 10:41:30] Set ATHENA_CORE_NUMBER=12
[2026-01-28 10:41:30] Starting ATLAS job with PandaID=6985857982
[2026-01-28 10:41:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-28 10:47:37]  *** The last 200 lines of the pilot log: ***
[2026-01-28 10:47:37] 2026-01-28 18:46:26,172 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-28 10:47:37] 2026-01-28 18:46:26,172 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-28 10:47:37] 2026-01-28 18:46:26,172 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-28 10:47:37] 2026-01-28 18:46:26,187 | WARNING  | wrong length of table data, x=[1769625816.0], y=[1984.0] (must be same and length>=4)
[2026-01-28 10:47:37] 2026-01-28 18:46:26,187 | INFO     | could have reported an average CPU frequency of 1449 MHz (4 samples)
[2026-01-28 10:47:37] 2026-01-28 18:46:26,188 | INFO     | ..............................
[2026-01-28 10:47:37] 2026-01-28 18:46:26,188 | INFO     | . Timing measurements:
[2026-01-28 10:47:37] 2026-01-28 18:46:26,188 | INFO     | . get job = 0 s
[2026-01-28 10:47:37] 2026-01-28 18:46:26,188 | INFO     | . initial setup = 24 s
[2026-01-28 10:47:37] 2026-01-28 18:46:26,188 | INFO     | . payload setup = 34 s
[2026-01-28 10:47:37] 2026-01-28 18:46:26,188 | INFO     | . stage-in = 0 s
[2026-01-28 10:47:37] 2026-01-28 18:46:26,188 | INFO     | . payload execution = 73 s
[2026-01-28 10:47:37] 2026-01-28 18:46:26,188 | INFO     | . stage-out = 2 s
[2026-01-28 10:47:37] 2026-01-28 18:46:26,188 | INFO     | . log creation = 0 s
[2026-01-28 10:47:37] 2026-01-28 18:46:26,188 | INFO     | ..............................
[2026-01-28 10:47:37] 2026-01-28 18:46:26,189 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-28 10:47:37] 2026-01-28 18:46:26,189 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6985857982/pilotlog.txt
[2026-01-28 10:47:37] 2026-01-28 18:46:26,289 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-01-28 10:47:37] - Log from pilotlog.txt -
[2026-01-28 10:47:37] 2026-01-28 18:46:26,171 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6985857982/memory_monitor_summary.json (trf name=prmon)
[2026-01-28 10:47:37] 2026-01-28 18:46:26,172 | INFO     | extracted standard info from prmon json
[2026-01-28 10:47:37] 2026-01-28 18:46:26,172 | INFO     | extracted standard memory fields from prmon json
[2026-01-28 10:47:37] 2026-01-28 18:46:26,172 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-28 10:47:37] 2026-01-28 18:46:26,172 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-28 10:47:37] 2026-01-28 18:46:26,172 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-28 10:47:37] 2026-01-28 18:46:26,187 | WARNING  | wrong length of table data, x=[1769625816.0], y=[1984.0] (must be same and length>=4)
[2026-01-28 10:47:37] 2026-01-28 18:46:26,187 | INFO     | could have reported an average CPU frequency of 1449 MHz (4 samples)
[2026-01-28 10:47:37] 2026-01-28 18:46:26,188 | INFO     | ..............................
[2026-01-28 10:47:37] 2026-01-28 18:46:26,188 | INFO     | . Timing measurements:
[2026-01-28 10:47:37] 2026-01-28 18:46:26,188 | INFO     | . get job = 0 s
[2026-01-28 10:47:37] 2026-01-28 18:46:26,188 | INFO     | . initial setup = 24 s
[2026-01-28 10:47:37] 2026-01-28 18:46:26,188 | INFO     | . payload setup = 34 s
[2026-01-28 10:47:37] 2026-01-28 18:46:26,188 | INFO     | . stage-in = 0 s
[2026-01-28 10:47:37] 2026-01-28 18:46:26,188 | INFO     | . payload execution = 73 s
[2026-01-28 10:47:37] 2026-01-28 18:46:26,188 | INFO     | . stage-out = 2 s
[2026-01-28 10:47:37] 2026-01-28 18:46:26,188 | INFO     | . log creation = 0 s
[2026-01-28 10:47:37] 2026-01-28 18:46:26,188 | INFO     | ..............................
[2026-01-28 10:47:37] 2026-01-28 18:46:26,189 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-28 10:47:37] 2026-01-28 18:46:26,189 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6985857982/pilotlog.txt
[2026-01-28 10:47:37] 2026-01-28 18:46:26,289 | WARNING  | 
[2026-01-28 10:47:37] [begin log extracts]
[2026-01-28 10:47:37] - Log from pilotlog.txt -
[2026-01-28 10:47:37] 2026-01-28 18:46:26,171 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6985857982/memory_monitor_summary.json (trf name=prmon)
[2026-01-28 10:47:37] 2026-01-28 18:46:26,172 | INFO     | extracted standard info from prmon json
[2026-01-28 10:47:37] 2026-01-28 18:46:26,172 | INFO     | extracted standard memory fields from prmon json
[2026-01-28 10:47:37] 2026-01-28 18:46:26,172 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-28 10:47:37] 2026-01-28 18:46:26,172 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-28 10:47:37] 2026-01-28 18:46:26,172 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-28 10:47:37] 2026-01-28 18:46:26,187 | WARNING  | wrong length of table data, x=[1769625816.0], y=[1984.0] (must be same and length>=4)
[2026-01-28 10:47:37] 2026-01-28 18:46:26,187 | INFO     | could have reported an average CPU frequency of 1449 MHz (4 samples)
[2026-01-28 10:47:37] 2026-01-28 18:46:26,188 | INFO     | ..............................
[2026-01-28 10:47:37] 2026-01-28 18:46:26,188 | INFO     | . Timing measurements:
[2026-01-28 10:47:37] 2026-01-28 18:46:26,188 | INFO     | . get job = 0 s
[2026-01-28 10:47:37] 2026-01-28 18:46:26,188 | INFO     | . initial setup = 24 s
[2026-01-28 10:47:37] 2026-01-28 18:46:26,188 | INFO     | . payload setup = 34 s
[2026-01-28 10:47:37] 2026-01-28 18:46:26,188 | INFO     | . stage-in = 0 s
[2026-01-28 10:47:37] 2026-01-28 18:46:26,188 | INFO     | . payload execution = 73 s
[2026-01-28 10:47:37] 2026-01-28 18:46:26,188 | INFO     | . stage-out = 2 s
[2026-01-28 10:47:37] 2026-01-28 18:46:26,188 | INFO     | . log creation = 0 s
[2026-01-28 10:47:37] 2026-01-28 18:46:26,188 | INFO     | ..............................
[2026-01-28 10:47:37] 2026-01-28 18:46:26,189 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-28 10:47:37] 2026-01-28 18:46:26,189 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6985857982/pilotlog.txt
[2026-01-28 10:47:37] [end log extracts]
[2026-01-28 10:47:37] 2026-01-28 18:46:26,289 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-01-28 10:47:37] 2026-01-28 18:46:26,290 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-01-28 10:47:37] 2026-01-28 18:46:26,603 | INFO     | 
[2026-01-28 10:47:37] 2026-01-28 18:46:26,603 | INFO     | job summary report
[2026-01-28 10:47:37] 2026-01-28 18:46:26,603 | INFO     | --------------------------------------------------
[2026-01-28 10:47:37] 2026-01-28 18:46:26,603 | INFO     | PanDA job id: 6985857982
[2026-01-28 10:47:37] 2026-01-28 18:46:26,604 | INFO     | task id: 48317872
[2026-01-28 10:47:37] 2026-01-28 18:46:26,604 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-01-28 10:44:13,253 CRITICAL Transform executor raised TransformValidationExceptio
[2026-01-28 10:47:37] 2026-01-28 18:46:26,604 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-28 10:47:37] 2026-01-28 18:46:26,604 | INFO     | pilot state: failed 
[2026-01-28 10:47:37] 2026-01-28 18:46:26,604 | INFO     | transexitcode: 65
[2026-01-28 10:47:37] 2026-01-28 18:46:26,604 | INFO     | exeerrorcode: 65
[2026-01-28 10:47:37] 2026-01-28 18:46:26,604 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-01-28 10:47:37] 2026-01-28 18:46:26,604 | INFO     | exitcode: 65
[2026-01-28 10:47:37] 2026-01-28 18:46:26,604 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-01-28 10:47:37] 2026-01-28 18:46:26,604 | INFO     | cpuconsumptiontime: 22 s
[2026-01-28 10:47:37] 2026-01-28 18:46:26,604 | INFO     | nevents: 0
[2026-01-28 10:47:37] 2026-01-28 18:46:26,605 | INFO     | neventsw: 0
[2026-01-28 10:47:37] 2026-01-28 18:46:26,605 | INFO     | pid: 360325
[2026-01-28 10:47:37] 2026-01-28 18:46:26,605 | INFO     | pgrp: 360325
[2026-01-28 10:47:37] 2026-01-28 18:46:26,605 | INFO     | corecount: 12
[2026-01-28 10:47:37] 2026-01-28 18:46:26,605 | INFO     | event service: False
[2026-01-28 10:47:37] 2026-01-28 18:46:26,605 | INFO     | sizes: {0: 2283796, 1: 2284257, 112: 2307450, 113: 2307454, 116: 2311774, 119: 2311830, 236: 2312124}
[2026-01-28 10:47:37] 2026-01-28 18:46:26,605 | INFO     | --------------------------------------------------
[2026-01-28 10:47:37] 2026-01-28 18:46:26,605 | INFO     | 
[2026-01-28 10:47:37] 2026-01-28 18:46:26,605 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-01-28 10:47:37] 2026-01-28 18:46:26,813 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-28 10:47:37] 2026-01-28 18:46:26,813 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-28 10:47:37] 2026-01-28 18:46:26,813 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-28 10:47:37] 2026-01-28 18:46:26,813 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-28 10:47:37] 2026-01-28 18:46:26,813 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-28 10:47:37] 2026-01-28 18:46:26,813 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-28 10:47:37] 2026-01-28 18:46:26,814 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-28 10:47:37] 2026-01-28 18:46:26,814 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-28 10:47:37] 2026-01-28 18:46:26,814 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-28 10:47:37] 2026-01-28 18:46:26,814 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-28 10:47:37] 2026-01-28 18:46:26,814 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-28 10:47:37] 2026-01-28 18:46:26,814 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-28 10:47:37] 2026-01-28 18:46:26,814 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-28 10:47:37] 2026-01-28 18:46:26,814 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-28 10:47:37] 2026-01-28 18:46:26,814 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-28 10:47:37] 2026-01-28 18:46:26,814 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-28 10:47:37] 2026-01-28 18:46:26,814 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-28 10:47:37] 2026-01-28 18:46:26,814 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-28 10:47:37] 2026-01-28 18:46:26,815 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-28 10:47:37] 2026-01-28 18:46:26,815 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-28 10:47:37] 2026-01-28 18:46:26,815 | INFO     | job 6985857982 has completed (purged errors)
[2026-01-28 10:47:37] 2026-01-28 18:46:26,815 | INFO     | overall cleanup function is called
[2026-01-28 10:47:37] 2026-01-28 18:46:27,845 | INFO     | --- collectZombieJob: --- 10, [360325]
[2026-01-28 10:47:37] 2026-01-28 18:46:27,846 | INFO     | zombie collector waiting for pid 360325
[2026-01-28 10:47:37] 2026-01-28 18:46:27,846 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-28 10:47:37] 2026-01-28 18:46:27,846 | INFO     | collected zombie processes
[2026-01-28 10:47:37] 2026-01-28 18:46:27,847 | INFO     | will attempt to kill all subprocesses of pid=360325
[2026-01-28 10:47:37] 2026-01-28 18:46:29,675 | INFO     | process IDs to be killed: [360325] (in reverse order)
[2026-01-28 10:47:37] 2026-01-28 18:46:29,789 | WARNING  | found no corresponding commands to process id(s)
[2026-01-28 10:47:37] 2026-01-28 18:46:29,796 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-28 10:47:37] 2026-01-28 18:46:29,833 | INFO     | did not find any defunct processes belonging to 360325
[2026-01-28 10:47:37] 2026-01-28 18:46:29,887 | INFO     | did not find any defunct processes belonging to 360325
[2026-01-28 10:47:37] 2026-01-28 18:46:29,887 | INFO     | ready for new job
[2026-01-28 10:47:37] 2026-01-28 18:46:29,888 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-28 10:47:37] 2026-01-28 18:46:29,910 | INFO     | **************************************
[2026-01-28 10:47:37] 2026-01-28 18:46:29,915 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-28 10:47:37] 2026-01-28 18:46:29,915 | INFO     | **************************************
[2026-01-28 10:47:37] 2026-01-28 18:46:29,915 | INFO     | 
[2026-01-28 10:47:37] 2026-01-28 18:46:29,918 | INFO     | architecture information:
[2026-01-28 10:47:37] 2026-01-28 18:46:29,919 | INFO     | executing command: cat /etc/os-release
[2026-01-28 10:47:37] 2026-01-28 18:46:29,970 | INFO     | cat /etc/os-release:
[2026-01-28 10:47:37] NAME="CentOS Linux"
[2026-01-28 10:47:37] VERSION="7 (Core)"
[2026-01-28 10:47:37] ID="centos"
[2026-01-28 10:47:37] ID_LIKE="rhel fedora"
[2026-01-28 10:47:37] VERSION_ID="7"
[2026-01-28 10:47:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-28 10:47:37] ANSI_COLOR="0;31"
[2026-01-28 10:47:37] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-28 10:47:37] HOME_URL="https://www.centos.org/"
[2026-01-28 10:47:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-28 10:47:37] 
[2026-01-28 10:47:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-28 10:47:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-28 10:47:37] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-28 10:47:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-28 10:47:37] 
[2026-01-28 10:47:37] 2026-01-28 18:46:29,971 | INFO     | **************************************
[2026-01-28 10:47:37] 2026-01-28 18:46:30,476 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-01-28 10:47:37] 2026-01-28 18:46:30,570 | INFO     | sufficient remaining disk space (1117559717888 B)
[2026-01-28 10:47:37] 2026-01-28 18:46:30,570 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-28 10:47:37] 2026-01-28 18:46:30,570 | INFO     | current server update state: UPDATING_FINAL
[2026-01-28 10:47:37] 2026-01-28 18:46:30,570 | INFO     | update_server=False
[2026-01-28 10:47:37] 2026-01-28 18:46:30,570 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-28 10:47:37] 2026-01-28 18:46:30,578 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-28 10:47:37] 2026-01-28 18:46:31,213 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-28 10:47:37] 2026-01-28 18:46:31,213 | INFO     | aborting loop
[2026-01-28 10:47:37] 2026-01-28 18:46:31,410 | INFO     | all data control threads have been joined
[2026-01-28 10:47:37] 2026-01-28 18:46:31,576 | INFO     | [job] retrieve thread has finished
[2026-01-28 10:47:37] 2026-01-28 18:46:31,589 | INFO     | [payload] validate_pre thread has finished
[2026-01-28 10:47:37] 2026-01-28 18:46:31,590 | INFO     | [job] create_data_payload thread has finished
[2026-01-28 10:47:37] 2026-01-28 18:46:31,623 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-28 10:47:37] 2026-01-28 18:46:31,702 | INFO     | all job control threads have been joined
[2026-01-28 10:47:37] 2026-01-28 18:46:31,879 | INFO     | [job] validate thread has finished
[2026-01-28 10:47:37] 2026-01-28 18:46:31,984 | INFO     | [payload] execute_payloads thread has finished
[2026-01-28 10:47:37] 2026-01-28 18:46:32,044 | INFO     | all payload control threads have been joined
[2026-01-28 10:47:37] 2026-01-28 18:46:32,057 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-28 10:47:37] 2026-01-28 18:46:32,219 | INFO     | [job] job monitor thread has finished
[2026-01-28 10:47:37] 2026-01-28 18:46:32,416 | INFO     | [data] control thread has finished
[2026-01-28 10:47:37] 2026-01-28 18:46:32,560 | INFO     | [payload] validate_post thread has finished
[2026-01-28 10:47:37] 2026-01-28 18:46:32,595 | INFO     | [data] copytool_out thread has finished
[2026-01-28 10:47:37] 2026-01-28 18:46:32,629 | INFO     | [job] queue monitor thread has finished
[2026-01-28 10:47:37] 2026-01-28 18:46:32,708 | INFO     | [job] control thread has finished
[2026-01-28 10:47:37] 2026-01-28 18:46:32,805 | INFO     | [payload] failed_post thread has finished
[2026-01-28 10:47:37] 2026-01-28 18:46:33,008 | INFO     | [data] copytool_in thread has finished
[2026-01-28 10:47:37] 2026-01-28 18:46:33,050 | INFO     | [payload] control thread has finished
[2026-01-28 10:47:37] 2026-01-28 18:46:33,120 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-28 10:47:37] 2026-01-28 18:46:37,129 | INFO     | [data] queue_monitor thread has finished
[2026-01-28 10:47:37] 2026-01-28 18:47:00,294 | INFO     | PID=355687 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-28 10:47:37] 2026-01-28 18:47:00,294 | INFO     | .. there are 28 such processes running
[2026-01-28 10:47:37] 2026-01-28 18:47:00,295 | INFO     | found 0 job(s) in 20 queues
[2026-01-28 10:47:37] 2026-01-28 18:47:00,295 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-28 10:47:37] 2026-01-28 18:47:00,300 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-28 10:47:37] 2026-01-28 18:47:29,243 | INFO     | [monitor] cgroup control has ended
[2026-01-28 10:47:37] 2026-01-28 18:47:30,230 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139883388987200)>', '<ExcThread(monitor, started 139882252990208)>']
[2026-01-28 10:47:37] 2026-01-28 18:47:30,480 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-28 10:47:37] 2026-01-28 18:47:30,480 | INFO     | [monitor] control thread has ended
[2026-01-28 10:47:37] 2026-01-28 18:47:35,260 | INFO     | all workflow threads have been joined
[2026-01-28 10:47:37] 2026-01-28 18:47:35,261 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-28 10:47:37] 2026-01-28 18:47:35,261 | INFO     | traces error code: 0
[2026-01-28 10:47:37] 2026-01-28 18:47:35,261 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-28 10:47:37] 2026-01-28 18:47:35,860 [wrapper] ==== pilot stdout END ====
[2026-01-28 10:47:37] 2026-01-28 18:47:35,896 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-28 10:47:37] 2026-01-28 18:47:35,931 [wrapper] pilotpid: 355687
[2026-01-28 10:47:37] 2026-01-28 18:47:35,966 [wrapper] Pilot exit status: 0
[2026-01-28 10:47:37] 2026-01-28 18:47:36,118 [wrapper] pandaids: 6985857982
[2026-01-28 10:47:37] 2026-01-28 18:47:36,891 [wrapper] cleanup supervisor_pilot  355693 355688
[2026-01-28 10:47:37] 2026-01-28 18:47:36,925 [wrapper] Test setup, not cleaning
[2026-01-28 10:47:37] 2026-01-28 18:47:36,964 [wrapper] apfmon messages muted
[2026-01-28 10:47:37] 2026-01-28 18:47:36,967 [wrapper] ==== wrapper stdout END ====
[2026-01-28 10:47:37] 2026-01-28 18:47:36,970 [wrapper] ==== wrapper stderr END ====
[2026-01-28 10:47:37]  *** Error codes and diagnostics ***
[2026-01-28 10:47:37]     "exeErrorCode": 65,
[2026-01-28 10:47:37]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-01-28 10:47:37]     "pilotErrorCode": 1305,
[2026-01-28 10:47:37]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-01-28 10:47:37]  *** Listing of results directory ***
[2026-01-28 10:47:37] total 493908
[2026-01-28 10:47:37] -rw-r--r--. 1 boinc boinc    584422 Jan 28 05:49 pilot3.tar.gz
[2026-01-28 10:47:37] -rwx------. 1 boinc boinc     36322 Jan 28 05:53 runpilot2-wrapper.sh
[2026-01-28 10:47:37] -rw-r--r--. 1 boinc boinc      5111 Jan 28 05:58 queuedata.json
[2026-01-28 10:47:37] -rw-r--r--. 1 boinc boinc       100 Jan 28 10:41 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-28 10:47:37] -rwxr-xr-x. 1 boinc boinc      7986 Jan 28 10:41 run_atlas
[2026-01-28 10:47:37] -rw-r--r--. 1 boinc boinc       105 Jan 28 10:41 job.xml
[2026-01-28 10:47:37] -rw-r--r--. 2 boinc boinc 501598003 Jan 28 10:41 EVNT.48317869._000141.pool.root.1
[2026-01-28 10:47:37] -rw-r--r--. 1 boinc boinc      6594 Jan 28 10:41 init_data.xml
[2026-01-28 10:47:37] -rw-r--r--. 2 boinc boinc     15845 Jan 28 10:41 start_atlas.sh
[2026-01-28 10:47:37] drwxrwx--x. 2 boinc boinc      4096 Jan 28 10:41 shared
[2026-01-28 10:47:37] -rw-r--r--. 2 boinc boinc    597758 Jan 28 10:41 input.tar.gz
[2026-01-28 10:47:37] -rw-r--r--. 1 boinc boinc         0 Jan 28 10:41 boinc_lockfile
[2026-01-28 10:47:37] -rw-r--r--. 1 boinc boinc      2514 Jan 28 10:41 pandaJob.out
[2026-01-28 10:47:37] -rw-------. 1 boinc boinc   1005192 Jan 28 10:42 agis_schedconf.cvmfs.json
[2026-01-28 10:47:37] -rw-------. 1 boinc boinc   1516246 Jan 28 10:42 agis_ddmendpoints.agis.ALL.json
[2026-01-28 10:47:37] -rw-------. 1 boinc boinc       445 Jan 28 10:42 workernode_map.json
[2026-01-28 10:47:37] drwx------. 5 boinc boinc      4096 Jan 28 10:42 pilot3
[2026-01-28 10:47:37] -rw-------. 1 boinc boinc       960 Jan 28 10:44 memory_monitor_summary.json
[2026-01-28 10:47:37] -rw-------. 1 boinc boinc     22094 Jan 28 10:44 log.48317872._007050.job.log.tgz.1
[2026-01-28 10:47:37] -rw-------. 1 boinc boinc        95 Jan 28 10:46 pilot_heartbeat.json
[2026-01-28 10:47:37] -rw-------. 1 boinc boinc      7017 Jan 28 10:46 heartbeat.json
[2026-01-28 10:47:37] -rw-r--r--. 1 boinc boinc       525 Jan 28 10:47 boinc_task_state.xml
[2026-01-28 10:47:37] -rw-r--r--. 1 boinc boinc      8192 Jan 28 10:47 boinc_mmap_file
[2026-01-28 10:47:37] -rw-------. 1 boinc boinc      4818 Jan 28 10:47 pilotlog.txt
[2026-01-28 10:47:37] -rw-r--r--. 1 boinc boinc        23 Jan 28 10:47 wrapper_checkpoint.txt
[2026-01-28 10:47:37] -rw-------. 1 boinc boinc     88253 Jan 28 10:47 log.48317872._007050.job.log.1
[2026-01-28 10:47:37] -rw-------. 1 boinc boinc       188 Jan 28 10:47 output.list
[2026-01-28 10:47:37] -rw-r--r--. 1 boinc boinc       620 Jan 28 10:47 runtime_log
[2026-01-28 10:47:37] -rw-------. 1 boinc boinc    133120 Jan 28 10:47 result.tar.gz
[2026-01-28 10:47:37] -rw-r--r--. 1 boinc boinc      8635 Jan 28 10:47 runtime_log.err
[2026-01-28 10:47:37] -rw-------. 1 boinc boinc       643 Jan 28 10:47 GvPLDmfAL58nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmxLGKDmZwwhCo.diag
[2026-01-28 10:47:37] -rw-r--r--. 1 boinc boinc     21772 Jan 28 10:47 stderr.txt
[2026-01-28 10:47:37] No HITS result produced
[2026-01-28 10:47:37]  *** Contents of shared directory: ***
[2026-01-28 10:47:37] total 490580
[2026-01-28 10:47:37] -rw-r--r--. 2 boinc boinc 501598003 Jan 28 10:41 ATLAS.root_0
[2026-01-28 10:47:37] -rw-r--r--. 2 boinc boinc     15845 Jan 28 10:41 start_atlas.sh
[2026-01-28 10:47:37] -rw-r--r--. 2 boinc boinc    597758 Jan 28 10:41 input.tar.gz
[2026-01-28 10:47:37] -rw-------. 1 boinc boinc    133120 Jan 28 10:47 result.tar.gz
10:47:39 (351955): run_atlas exited; CPU time 32.481897
10:47:39 (351955): called boinc_finish(0)

</stderr_txt>
]]>

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