Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
00:04:44 (263137): wrapper (7.7.26015): starting
00:04:44 (263137): wrapper: running run_atlas (--nthreads 3)
[2026-01-29 00:04:44] Arguments: --nthreads 3
[2026-01-29 00:04:44] Threads: 3
[2026-01-29 00:04:44] Checking for CVMFS
[2026-01-29 00:04:44] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-29 00:04:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-29 00:04:45] Running cvmfs_config stat atlas.cern.ch
[2026-01-29 00:04:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-29 00:04:45] 2.9.2.0 138496 512 55496 155626 3 188 17960949 36864000 0 130560 0 201204 99.989 7092 6005 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-29 00:04:45] CVMFS is ok
[2026-01-29 00:04:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-29 00:04:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-29 00:04:45] Further information can be found at the LHC@home message board.
[2026-01-29 00:04:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-29 00:04:45] Checking for apptainer binary...
[2026-01-29 00:04:45] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-29 00:04:45] Running /usr/bin/apptainer --version
[2026-01-29 00:04:45] apptainer version 1.4.1-1.1
[2026-01-29 00:04:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-29 00:04:45] atlasA221b
[2026-01-29 00:04:45] apptainer works
[2026-01-29 00:04:45] Set ATHENA_PROC_NUMBER=3
[2026-01-29 00:04:45] Set ATHENA_CORE_NUMBER=3
[2026-01-29 00:04:45] Starting ATLAS job with PandaID=6985623664
[2026-01-29 00:04:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-29 01:44:12]  *** The last 200 lines of the pilot log: ***
[2026-01-29 01:44:12] VERSION="7 (Core)"
[2026-01-29 01:44:12] ID="centos"
[2026-01-29 01:44:12] ID_LIKE="rhel fedora"
[2026-01-29 01:44:12] VERSION_ID="7"
[2026-01-29 01:44:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-29 01:44:12] ANSI_COLOR="0;31"
[2026-01-29 01:44:12] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-29 01:44:12] HOME_URL="https://www.centos.org/"
[2026-01-29 01:44:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-29 01:44:12] 
[2026-01-29 01:44:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-29 01:44:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-29 01:44:12] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-29 01:44:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-29 01:44:12] 
[2026-01-29 01:44:12] 2026-01-29 00:43:25,241 | INFO     | **************************************
[2026-01-29 01:44:12] 2026-01-29 00:43:25,744 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-29 01:44:12] 2026-01-29 00:43:25,754 | INFO     | sufficient remaining disk space (339813072896 B)
[2026-01-29 01:44:12] 2026-01-29 00:43:25,754 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-29 01:44:12] 2026-01-29 00:43:25,754 | INFO     | current server update state: UPDATING_FINAL
[2026-01-29 01:44:12] 2026-01-29 00:43:25,754 | INFO     | update_server=False
[2026-01-29 01:44:12] 2026-01-29 00:43:25,754 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-29 01:44:12] 2026-01-29 00:43:25,754 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-29 01:44:12] 2026-01-29 00:43:25,755 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-29 01:44:12] 2026-01-29 00:43:25,836 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-29 01:44:12] 2026-01-29 00:43:25,836 | INFO     | aborting loop
[2026-01-29 01:44:12] 2026-01-29 00:43:25,963 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-29 01:44:12] 2026-01-29 00:43:26,234 | INFO     | all job control threads have been joined
[2026-01-29 01:44:12] 2026-01-29 00:43:26,743 | INFO     | all data control threads have been joined
[2026-01-29 01:44:12] 2026-01-29 00:43:26,760 | INFO     | [job] retrieve thread has finished
[2026-01-29 01:44:12] 2026-01-29 00:43:26,761 | INFO     | [job] queue monitor thread has finished
[2026-01-29 01:44:12] 2026-01-29 00:43:26,774 | INFO     | [data] copytool_in thread has finished
[2026-01-29 01:44:12] 2026-01-29 00:43:26,841 | INFO     | [job] job monitor thread has finished
[2026-01-29 01:44:12] 2026-01-29 00:43:27,057 | INFO     | all payload control threads have been joined
[2026-01-29 01:44:12] 2026-01-29 00:43:27,240 | INFO     | [job] control thread has finished
[2026-01-29 01:44:12] 2026-01-29 00:43:27,507 | INFO     | [payload] failed_post thread has finished
[2026-01-29 01:44:12] 2026-01-29 00:43:27,573 | INFO     | [payload] execute_payloads thread has finished
[2026-01-29 01:44:12] 2026-01-29 00:43:27,748 | INFO     | [data] control thread has finished
[2026-01-29 01:44:12] 2026-01-29 00:43:27,967 | INFO     | [data] copytool_out thread has finished
[2026-01-29 01:44:12] 2026-01-29 00:43:28,022 | INFO     | [job] validate thread has finished
[2026-01-29 01:44:12] 2026-01-29 00:43:28,062 | INFO     | [payload] control thread has finished
[2026-01-29 01:44:12] 2026-01-29 00:43:28,063 | INFO     | [job] create_data_payload thread has finished
[2026-01-29 01:44:12] 2026-01-29 00:43:28,076 | INFO     | [payload] validate_post thread has finished
[2026-01-29 01:44:12] 2026-01-29 00:43:28,088 | INFO     | [payload] validate_pre thread has finished
[2026-01-29 01:44:12] 2026-01-29 00:43:29,760 | INFO     | [data] queue_monitor thread has finished
[2026-01-29 01:44:12] 2026-01-29 00:43:35,998 | INFO     | job.realtimelogging is not enabled
[2026-01-29 01:44:12] 2026-01-29 00:43:37,003 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-29 01:44:12] 2026-01-29 00:43:56,664 | INFO     | PID=267197 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-29 01:44:12] 2026-01-29 00:43:56,664 | INFO     | found 0 job(s) in 20 queues
[2026-01-29 01:44:12] 2026-01-29 00:43:56,665 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-29 01:44:12] 2026-01-29 00:43:56,665 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-29 01:44:12] 2026-01-29 00:44:07,254 | INFO     | [monitor] cgroup control has ended
[2026-01-29 01:44:12] 2026-01-29 00:44:07,337 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140624726710080)>', '<ExcThread(monitor, started 140624359560960)>']
[2026-01-29 01:44:12] 2026-01-29 00:44:07,714 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-29 01:44:12] 2026-01-29 00:44:07,714 | INFO     | [monitor] control thread has ended
[2026-01-29 01:44:12] 2026-01-29 00:44:12,348 | INFO     | all workflow threads have been joined
[2026-01-29 01:44:12] 2026-01-29 00:44:12,348 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-29 01:44:12] 2026-01-29 00:44:12,348 | INFO     | traces error code: 0
[2026-01-29 01:44:12] 2026-01-29 00:44:12,348 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-29 01:44:12] 2026-01-29 00:44:12,391 [wrapper] ==== pilot stdout END ====
[2026-01-29 01:44:12] 2026-01-29 00:44:12,394 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-29 01:44:12] 2026-01-29 00:44:12,397 [wrapper] pilotpid: 267197
[2026-01-29 01:44:12] 2026-01-29 00:44:12,400 [wrapper] Pilot exit status: 0
[2026-01-29 01:44:12] 2026-01-29 00:44:12,408 [wrapper] pandaids: 6985623664
[2026-01-29 01:44:12] 2026-01-29 00:44:12,429 [wrapper] cleanup supervisor_pilot  286424 267198
[2026-01-29 01:44:12] 2026-01-29 00:44:12,431 [wrapper] Test setup, not cleaning
[2026-01-29 01:44:12] 2026-01-29 00:44:12,434 [wrapper] apfmon messages muted
[2026-01-29 01:44:12] 2026-01-29 00:44:12,437 [wrapper] ==== wrapper stdout END ====
[2026-01-29 01:44:12] 2026-01-29 00:44:12,439 [wrapper] ==== wrapper stderr END ====
[2026-01-29 01:44:12]  *** Error codes and diagnostics ***
[2026-01-29 01:44:12]     "exeErrorCode": 0,
[2026-01-29 01:44:12]     "exeErrorDiag": "",
[2026-01-29 01:44:12]     "pilotErrorCode": 0,
[2026-01-29 01:44:12]     "pilotErrorDiag": "",
[2026-01-29 01:44:12]  *** Listing of results directory ***
[2026-01-29 01:44:12] total 675100
[2026-01-29 01:44:12] -rw-r--r-- 1 boinc boinc    584422 Jan 28 14:49 pilot3.tar.gz
[2026-01-29 01:44:12] -rwx------ 1 boinc boinc     36322 Jan 28 14:52 runpilot2-wrapper.sh
[2026-01-29 01:44:12] -rw-r--r-- 1 boinc boinc      5111 Jan 28 14:56 queuedata.json
[2026-01-29 01:44:12] -rw-r--r-- 1 boinc boinc       100 Jan 29 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-29 01:44:12] -rwxr-xr-x 1 boinc boinc      7986 Jan 29 00:04 run_atlas
[2026-01-29 01:44:12] -rw-r--r-- 1 boinc boinc       105 Jan 29 00:04 job.xml
[2026-01-29 01:44:12] -rw-r--r-- 2 boinc boinc 499926193 Jan 29 00:04 EVNT.48317929._000100.pool.root.1
[2026-01-29 01:44:12] -rw-r--r-- 2 boinc boinc    597760 Jan 29 00:04 input.tar.gz
[2026-01-29 01:44:12] -rw-r--r-- 2 boinc boinc     15845 Jan 29 00:04 start_atlas.sh
[2026-01-29 01:44:12] drwxrwx--x 2 boinc boinc      4096 Jan 29 00:04 shared
[2026-01-29 01:44:12] -rw-r--r-- 1 boinc boinc         0 Jan 29 00:04 boinc_setup_complete
[2026-01-29 01:44:12] -rw-r--r-- 1 boinc boinc      6199 Jan 29 00:04 init_data.xml
[2026-01-29 01:44:12] -rw-r--r-- 1 boinc boinc         0 Jan 29 00:04 boinc_lockfile
[2026-01-29 01:44:12] -rw-r--r-- 1 boinc boinc      2509 Jan 29 00:04 pandaJob.out
[2026-01-29 01:44:12] -rw------- 1 boinc boinc   1005755 Jan 29 00:04 agis_schedconf.cvmfs.json
[2026-01-29 01:44:12] -rw------- 1 boinc boinc   1516246 Jan 29 00:04 agis_ddmendpoints.agis.ALL.json
[2026-01-29 01:44:12] -rw------- 1 boinc boinc       423 Jan 29 00:04 workernode_map.json
[2026-01-29 01:44:12] drwx------ 5 boinc boinc      4096 Jan 29 00:04 pilot3
[2026-01-29 01:44:12] -rw------- 1 boinc boinc 185123803 Jan 29 01:43 HITS.48317931._003814.pool.root.1
[2026-01-29 01:44:12] -rw-r--r-- 1 boinc boinc       530 Jan 29 01:43 boinc_task_state.xml
[2026-01-29 01:44:12] -rw------- 1 boinc boinc      1030 Jan 29 01:43 memory_monitor_summary.json
[2026-01-29 01:44:12] -rw------- 1 boinc boinc    307079 Jan 29 01:43 log.48317931._003814.job.log.tgz.1
[2026-01-29 01:44:12] -rw------- 1 boinc boinc      6319 Jan 29 01:43 heartbeat.json
[2026-01-29 01:44:12] -rw------- 1 boinc boinc        95 Jan 29 01:43 pilot_heartbeat.json
[2026-01-29 01:44:12] -rw-r--r-- 1 boinc boinc      8192 Jan 29 01:44 boinc_mmap_file
[2026-01-29 01:44:12] -rw-r--r-- 1 boinc boinc        27 Jan 29 01:44 wrapper_checkpoint.txt
[2026-01-29 01:44:12] -rw------- 1 boinc boinc      4819 Jan 29 01:44 pilotlog.txt
[2026-01-29 01:44:12] -rw------- 1 boinc boinc    853328 Jan 29 01:44 log.48317931._003814.job.log.1
[2026-01-29 01:44:12] -rw------- 1 boinc boinc       357 Jan 29 01:44 output.list
[2026-01-29 01:44:12] -rw-r--r-- 1 boinc boinc       620 Jan 29 01:44 runtime_log
[2026-01-29 01:44:12] -rw------- 1 boinc boinc   1177600 Jan 29 01:44 result.tar.gz
[2026-01-29 01:44:12] -rw-r--r-- 1 boinc boinc      8916 Jan 29 01:44 runtime_log.err
[2026-01-29 01:44:12] -rw------- 1 boinc boinc       661 Jan 29 01:44 CIqLDmR9K58n9Rq4apOajLDm4fhM0noT9bVooX4SDmqGGKDm5weTzm.diag
[2026-01-29 01:44:12] -rw-r--r-- 1 boinc boinc      8754 Jan 29 01:44 stderr.txt
[2026-01-29 01:44:12] HITS file was successfully produced:
[2026-01-29 01:44:12] -rw------- 1 boinc boinc 185123803 Jan 29 01:43 shared/HITS.pool.root.1
[2026-01-29 01:44:12]  *** Contents of shared directory: ***
[2026-01-29 01:44:12] total 670760
[2026-01-29 01:44:12] -rw-r--r-- 2 boinc boinc 499926193 Jan 29 00:04 ATLAS.root_0
[2026-01-29 01:44:12] -rw-r--r-- 2 boinc boinc    597760 Jan 29 00:04 input.tar.gz
[2026-01-29 01:44:12] -rw-r--r-- 2 boinc boinc     15845 Jan 29 00:04 start_atlas.sh
[2026-01-29 01:44:12] -rw------- 1 boinc boinc 185123803 Jan 29 01:43 HITS.pool.root.1
[2026-01-29 01:44:12] -rw------- 1 boinc boinc   1177600 Jan 29 01:44 result.tar.gz
01:44:13 (263137): run_atlas exited; CPU time 17069.143949
01:44:13 (263137): called boinc_finish(0)

</stderr_txt>
]]>

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