Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:49:59 (1251): wrapper (7.7.26015): starting
14:49:59 (1251): wrapper: running run_atlas (--nthreads 8)
[2026-01-28 14:49:59] Arguments: --nthreads 8
[2026-01-28 14:49:59] Threads: 8
[2026-01-28 14:49:59] Checking for CVMFS
[2026-01-28 14:50:00] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-28 14:50:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-28 14:50:00] Running cvmfs_config stat atlas.cern.ch
[2026-01-28 14:50:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-28 14:50:03] 2.11.2.0 13652 62844 130596 155622 1 13 20216567 25165824 899 130560 0 25220882 99.813 17431463 3094 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-28 14:50:03] CVMFS is ok
[2026-01-28 14:50:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-28 14:50:03] Checking for apptainer binary...
[2026-01-28 14:50:03] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-28 14:50:03] Running /usr/bin/apptainer --version
[2026-01-28 14:50:03] apptainer version 1.3.2-1.el7
[2026-01-28 14:50:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-28 14:50:20] cg-vwn453.simple-grid.lan
[2026-01-28 14:50:20] apptainer works
[2026-01-28 14:50:20] Set ATHENA_PROC_NUMBER=8
[2026-01-28 14:50:20] Set ATHENA_CORE_NUMBER=8
[2026-01-28 14:50:21] Starting ATLAS job with PandaID=6984881772
[2026-01-28 14:50:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/15 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-28 18:24:20]  *** The last 200 lines of the pilot log: ***
[2026-01-28 18:24:20] 2026-01-28 17:23:11,752 | INFO     | using path: /var/lib/boinc/slots/15/PanDA_Pilot-6984881772/memory_monitor_summary.json (trf name=prmon)
[2026-01-28 18:24:20] 2026-01-28 17:23:11,753 | INFO     | extracted standard info from prmon json
[2026-01-28 18:24:20] 2026-01-28 17:23:11,753 | INFO     | extracted standard memory fields from prmon json
[2026-01-28 18:24:20] 2026-01-28 17:23:11,753 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-28 18:24:20] 2026-01-28 17:23:11,753 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-28 18:24:20] 2026-01-28 17:23:11,753 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-28 18:24:20] 2026-01-28 17:23:11,757 | INFO     | fitting pss+swap vs Time
[2026-01-28 18:24:20] 2026-01-28 17:23:11,758 | INFO     | sum of square deviations: 2443580700.0
[2026-01-28 18:24:20] 2026-01-28 17:23:11,759 | INFO     | sum of deviations: 145078679305.0
[2026-01-28 18:24:20] 2026-01-28 17:23:11,759 | INFO     | mean x: 1769614922.0
[2026-01-28 18:24:20] 2026-01-28 17:23:11,759 | INFO     | mean y: 2661918.2763819094
[2026-01-28 18:24:20] 2026-01-28 17:23:11,759 | INFO     | intersect: -105061760861.85959
[2026-01-28 18:24:20] 2026-01-28 17:23:11,760 | INFO     | chi2: 9.04383475881004
[2026-01-28 18:24:20] 2026-01-28 17:23:11,760 | INFO     | sum of square deviations: 2263977332.5
[2026-01-28 18:24:20] 2026-01-28 17:23:11,762 | INFO     | sum of deviations: 155294311973.0
[2026-01-28 18:24:20] 2026-01-28 17:23:11,762 | INFO     | mean x: 1769614769.5
[2026-01-28 18:24:20] 2026-01-28 17:23:11,762 | INFO     | mean y: 2670342.2989690723
[2026-01-28 18:24:20] 2026-01-28 17:23:11,762 | INFO     | intersect: -121381543245.78539
[2026-01-28 18:24:20] 2026-01-28 17:23:11,762 | INFO     | chi2: 8.384366925498162
[2026-01-28 18:24:20] 2026-01-28 17:23:11,763 | INFO     | current chi2=8.384366925498162 (change=7.2919049374432445 %)
[2026-01-28 18:24:20] 2026-01-28 17:23:11,763 | INFO     | right removable region: 193
[2026-01-28 18:24:20] 2026-01-28 17:23:11,763 | INFO     | sum of square deviations: 2263977332.5
[2026-01-28 18:24:20] 2026-01-28 17:23:11,765 | INFO     | sum of deviations: 68687457899.99997
[2026-01-28 18:24:20] 2026-01-28 17:23:11,765 | INFO     | mean x: 1769615074.5
[2026-01-28 18:24:20] 2026-01-28 17:23:11,765 | INFO     | mean y: 2726742.711340206
[2026-01-28 18:24:20] 2026-01-28 17:23:11,765 | INFO     | intersect: -53686132763.0956
[2026-01-28 18:24:20] 2026-01-28 17:23:11,765 | INFO     | chi2: 3.8366458002418526
[2026-01-28 18:24:20] 2026-01-28 17:23:11,765 | INFO     | current chi2=3.8366458002418526 (change=57.57722357206506 %)
[2026-01-28 18:24:20] 2026-01-28 17:23:11,766 | INFO     | sum of square deviations: 2093397390.0
[2026-01-28 18:24:20] 2026-01-28 17:23:11,771 | INFO     | sum of deviations: 8666642587.999989
[2026-01-28 18:24:20] 2026-01-28 17:23:11,771 | INFO     | mean x: 1769615227.0
[2026-01-28 18:24:20] 2026-01-28 17:23:11,772 | INFO     | mean y: 2780335.7513227514
[2026-01-28 18:24:20] 2026-01-28 17:23:11,772 | INFO     | intersect: -7323407593.952492
[2026-01-28 18:24:20] 2026-01-28 17:23:11,772 | INFO     | chi2: 0.9400658076452327
[2026-01-28 18:24:20] 2026-01-28 17:23:11,772 | INFO     | current chi2=0.9400658076452327 (change=75.49771710523882 %)
[2026-01-28 18:24:20] 2026-01-28 17:23:11,772 | INFO     | sum of square deviations: 1931608310.0
[2026-01-28 18:24:20] 2026-01-28 17:23:11,774 | INFO     | sum of deviations: -5719116823.499998
[2026-01-28 18:24:20] 2026-01-28 17:23:11,774 | INFO     | mean x: 1769615379.5
[2026-01-28 18:24:20] 2026-01-28 17:23:11,774 | INFO     | mean y: 2793808.538043478
[2026-01-28 18:24:20] 2026-01-28 17:23:11,774 | INFO     | intersect: 5242281046.001204
[2026-01-28 18:24:20] 2026-01-28 17:23:11,774 | INFO     | chi2: 0.7583071757766232
[2026-01-28 18:24:20] 2026-01-28 17:23:11,775 | INFO     | current chi2=0.7583071757766232 (change=19.334671082644313 %)
[2026-01-28 18:24:20] 2026-01-28 17:23:11,775 | INFO     | left removable region: 30
[2026-01-28 18:24:20] 2026-01-28 17:23:11,775 | INFO     | sum of square deviations: 1342841922.0
[2026-01-28 18:24:20] 2026-01-28 17:23:11,776 | INFO     | sum of deviations: 3097702305.000001
[2026-01-28 18:24:20] 2026-01-28 17:23:11,776 | INFO     | mean x: 1769615654.0
[2026-01-28 18:24:20] 2026-01-28 17:23:11,776 | INFO     | mean y: 2811277.1779141105
[2026-01-28 18:24:20] 2026-01-28 17:23:11,776 | INFO     | intersect: -4079383656.232784
[2026-01-28 18:24:20] 2026-01-28 17:23:11,777 | INFO     | chi2: 0.00045355954818641605
[2026-01-28 18:24:20] 2026-01-28 17:23:11,777 | INFO     | current memory leak: 2.31 B/s (using 163 data points, chi2=0.00)
[2026-01-28 18:24:20] 2026-01-28 17:23:11,777 | INFO     | could have reported an average CPU frequency of 2250 MHz (10 samples)
[2026-01-28 18:24:20] 2026-01-28 17:23:11,778 | INFO     | ..............................
[2026-01-28 18:24:20] 2026-01-28 17:23:11,778 | INFO     | . Timing measurements:
[2026-01-28 18:24:20] 2026-01-28 17:23:11,778 | INFO     | . get job = 0 s
[2026-01-28 18:24:20] 2026-01-28 17:23:11,778 | INFO     | . initial setup = 112 s
[2026-01-28 18:24:20] 2026-01-28 17:23:11,778 | INFO     | . payload setup = 144 s
[2026-01-28 18:24:20] 2026-01-28 17:23:11,778 | INFO     | . stage-in = 0 s
[2026-01-28 18:24:20] 2026-01-28 17:23:11,778 | INFO     | . payload execution = 12224 s
[2026-01-28 18:24:20] 2026-01-28 17:23:11,778 | INFO     | . stage-out = 3 s
[2026-01-28 18:24:20] 2026-01-28 17:23:11,778 | INFO     | . log creation = 1 s
[2026-01-28 18:24:20] 2026-01-28 17:23:11,778 | INFO     | ..............................
[2026-01-28 18:24:20] 2026-01-28 17:23:11,911 | INFO     | 
[2026-01-28 18:24:20] 2026-01-28 17:23:11,911 | INFO     | job summary report
[2026-01-28 18:24:20] 2026-01-28 17:23:11,911 | INFO     | --------------------------------------------------
[2026-01-28 18:24:20] 2026-01-28 17:23:11,911 | INFO     | PanDA job id: 6984881772
[2026-01-28 18:24:20] 2026-01-28 17:23:11,911 | INFO     | task id: 48317971
[2026-01-28 18:24:20] 2026-01-28 17:23:11,911 | INFO     | errors: (none)
[2026-01-28 18:24:20] 2026-01-28 17:23:11,912 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-28 18:24:20] 2026-01-28 17:23:11,912 | INFO     | pilot state: finished 
[2026-01-28 18:24:20] 2026-01-28 17:23:11,912 | INFO     | transexitcode: 0
[2026-01-28 18:24:20] 2026-01-28 17:23:11,912 | INFO     | exeerrorcode: 0
[2026-01-28 18:24:20] 2026-01-28 17:23:11,912 | INFO     | exeerrordiag: 
[2026-01-28 18:24:20] 2026-01-28 17:23:11,912 | INFO     | exitcode: 0
[2026-01-28 18:24:20] 2026-01-28 17:23:11,912 | INFO     | exitmsg: OK
[2026-01-28 18:24:20] 2026-01-28 17:23:11,912 | INFO     | cpuconsumptiontime: 57205 s
[2026-01-28 18:24:20] 2026-01-28 17:23:11,912 | INFO     | nevents: 400
[2026-01-28 18:24:20] 2026-01-28 17:23:11,912 | INFO     | neventsw: 0
[2026-01-28 18:24:20] 2026-01-28 17:23:11,913 | INFO     | pid: 9694
[2026-01-28 18:24:20] 2026-01-28 17:23:11,913 | INFO     | pgrp: 9694
[2026-01-28 18:24:20] 2026-01-28 17:23:11,913 | INFO     | corecount: 8
[2026-01-28 18:24:20] 2026-01-28 17:23:11,913 | INFO     | event service: False
[2026-01-28 18:24:20] 2026-01-28 17:23:11,913 | INFO     | sizes: {0: 2283131, 1: 2284190, 2: 2284278, 12373: 2314149, 12377: 2323205, 12378: 2323343}
[2026-01-28 18:24:20] 2026-01-28 17:23:11,913 | INFO     | --------------------------------------------------
[2026-01-28 18:24:20] 2026-01-28 17:23:11,913 | INFO     | 
[2026-01-28 18:24:20] 2026-01-28 17:23:11,913 | INFO     | executing command: ls -lF /var/lib/boinc/slots/15
[2026-01-28 18:24:20] 2026-01-28 17:23:12,257 | INFO     | time since job start (12381s) is within the limit (349056.0s)
[2026-01-28 18:24:20] 2026-01-28 17:23:12,412 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-28 18:24:20] 2026-01-28 17:23:12,413 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-28 18:24:20] 2026-01-28 17:23:12,413 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-28 18:24:20] 2026-01-28 17:23:12,413 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-28 18:24:20] 2026-01-28 17:23:12,413 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-28 18:24:20] 2026-01-28 17:23:12,413 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-28 18:24:20] 2026-01-28 17:23:12,413 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-28 18:24:20] 2026-01-28 17:23:12,413 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-28 18:24:20] 2026-01-28 17:23:12,413 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-28 18:24:20] 2026-01-28 17:23:12,413 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-28 18:24:20] 2026-01-28 17:23:12,413 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-28 18:24:20] 2026-01-28 17:23:12,414 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-28 18:24:20] 2026-01-28 17:23:12,414 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-28 18:24:20] 2026-01-28 17:23:12,414 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-28 18:24:20] 2026-01-28 17:23:12,414 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-28 18:24:20] 2026-01-28 17:23:12,414 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-28 18:24:20] 2026-01-28 17:23:12,414 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-28 18:24:20] 2026-01-28 17:23:12,414 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-28 18:24:20] 2026-01-28 17:23:12,414 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-28 18:24:20] 2026-01-28 17:23:12,414 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-28 18:24:20] 2026-01-28 17:23:12,414 | INFO     | job 6984881772 has completed (purged errors)
[2026-01-28 18:24:20] 2026-01-28 17:23:12,415 | INFO     | overall cleanup function is called
[2026-01-28 18:24:20] 2026-01-28 17:23:13,423 | INFO     | --- collectZombieJob: --- 10, [9694]
[2026-01-28 18:24:20] 2026-01-28 17:23:13,423 | INFO     | zombie collector waiting for pid 9694
[2026-01-28 18:24:20] 2026-01-28 17:23:13,423 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-28 18:24:20] 2026-01-28 17:23:13,424 | INFO     | collected zombie processes
[2026-01-28 18:24:20] 2026-01-28 17:23:13,424 | INFO     | will attempt to kill all subprocesses of pid=9694
[2026-01-28 18:24:20] 2026-01-28 17:23:13,503 | INFO     | process IDs to be killed: [9694] (in reverse order)
[2026-01-28 18:24:20] 2026-01-28 17:23:14,501 | WARNING  | found no corresponding commands to process id(s)
[2026-01-28 18:24:20] 2026-01-28 17:23:14,502 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-28 18:24:20] 2026-01-28 17:23:14,504 | INFO     | did not find any defunct processes belonging to 9694
[2026-01-28 18:24:20] 2026-01-28 17:23:14,505 | INFO     | did not find any defunct processes belonging to 9694
[2026-01-28 18:24:20] 2026-01-28 17:23:14,506 | INFO     | ready for new job
[2026-01-28 18:24:20] 2026-01-28 17:23:14,506 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-28 18:24:20] 2026-01-28 17:23:14,508 | INFO     | **************************************
[2026-01-28 18:24:20] 2026-01-28 17:23:14,508 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-28 18:24:20] 2026-01-28 17:23:14,508 | INFO     | **************************************
[2026-01-28 18:24:20] 2026-01-28 17:23:14,508 | INFO     | 
[2026-01-28 18:24:20] 2026-01-28 17:23:14,509 | INFO     | pilot is running in a VM
[2026-01-28 18:24:20] 2026-01-28 17:23:14,509 | INFO     | architecture information:
[2026-01-28 18:24:20] 2026-01-28 17:23:14,521 | INFO     | executing command: cat /etc/os-release
[2026-01-28 18:24:20] 2026-01-28 17:23:14,810 | INFO     | cat /etc/os-release:
[2026-01-28 18:24:20] NAME="CentOS Linux"
[2026-01-28 18:24:20] VERSION="7 (Core)"
[2026-01-28 18:24:20] ID="centos"
[2026-01-28 18:24:20] ID_LIKE="rhel fedora"
[2026-01-28 18:24:20] VERSION_ID="7"
[2026-01-28 18:24:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-28 18:24:20] ANSI_COLOR="0;31"
[2026-01-28 18:24:20] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-28 18:24:20] HOME_URL="https://www.centos.org/"
[2026-01-28 18:24:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-28 18:24:20] 
[2026-01-28 18:24:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-28 18:24:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-28 18:24:20] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-28 18:24:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-28 18:24:20] 
[2026-01-28 18:24:20] 2026-01-28 17:23:14,811 | INFO     | **************************************
[2026-01-28 18:24:20] 2026-01-28 17:23:15,314 | INFO     | executing command: df -mP /var/lib/boinc/slots/15
[2026-01-28 18:24:20] 2026-01-28 17:23:15,605 | INFO     | sufficient remaining disk space (496415801344 B)
[2026-01-28 18:24:20] 2026-01-28 17:23:15,605 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-28 18:24:20] 2026-01-28 17:23:15,605 | INFO     | current server update state: UPDATING_FINAL
[2026-01-28 18:24:20] 2026-01-28 17:23:15,605 | INFO     | update_server=False
[2026-01-28 18:24:20] 2026-01-28 17:23:15,605 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-28 18:24:20] 2026-01-28 17:23:15,612 | INFO     | all job control threads have been joined
[2026-01-28 18:24:20] 2026-01-28 17:23:15,751 | INFO     | all data control threads have been joined
[2026-01-28 18:24:20] 2026-01-28 17:23:15,928 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-28 18:24:20] 2026-01-28 17:23:15,928 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-28 18:24:20] 2026-01-28 17:23:15,928 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-28 18:24:20] 2026-01-28 17:23:15,929 | INFO     | will abort loop
[2026-01-28 18:24:20] 2026-01-28 17:23:16,241 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-28 18:24:20] 2026-01-28 17:23:16,611 | INFO     | [job] retrieve thread has finished
[2026-01-28 18:24:20] 2026-01-28 17:23:16,618 | INFO     | [job] control thread has finished
[2026-01-28 18:24:20] 2026-01-28 17:23:16,621 | INFO     | [payload] execute_payloads thread has finished
[2026-01-28 18:24:20] 2026-01-28 17:23:16,757 | INFO     | [data] control thread has finished
[2026-01-28 18:24:20] 2026-01-28 17:23:16,831 | INFO     | all payload control threads have been joined
[2026-01-28 18:24:20] 2026-01-28 17:23:16,850 | INFO     | [payload] failed_post thread has finished
[2026-01-28 18:24:20] 2026-01-28 17:23:16,877 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-28 18:24:20] 2026-01-28 17:23:16,925 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-28 18:24:20] 2026-01-28 17:23:16,934 | INFO     | [job] job monitor thread has finished
[2026-01-28 18:24:20] 2026-01-28 17:23:17,156 | INFO     | [data] copytool_in thread has finished
[2026-01-28 18:24:20] 2026-01-28 17:23:17,214 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-28 18:24:20] 2026-01-28 17:23:17,339 | INFO     | [job] create_data_payload thread has finished
[2026-01-28 18:24:20] 2026-01-28 17:23:17,358 | INFO     | [payload] validate_post thread has finished
[2026-01-28 18:24:20] 2026-01-28 17:23:17,616 | INFO     | [payload] validate_pre thread has finished
[2026-01-28 18:24:20] 2026-01-28 17:23:17,837 | INFO     | [payload] control thread has finished
[2026-01-28 18:24:20] 2026-01-28 17:23:17,931 | INFO     | [job] queue monitor thread has finished
[2026-01-28 18:24:20] 2026-01-28 17:23:18,085 | INFO     | [job] validate thread has finished
[2026-01-28 18:24:20] 2026-01-28 17:23:18,248 | INFO     | [data] copytool_out thread has finished
[2026-01-28 18:24:20] 2026-01-28 17:23:20,886 | INFO     | [data] queue_monitor thread has finished
[2026-01-28 18:24:20] 2026-01-28 17:23:45,394 | INFO     | PID=5254 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-28 18:24:20] 2026-01-28 17:23:45,394 | INFO     | .. there are 2 such processes running
[2026-01-28 18:24:20] 2026-01-28 17:23:45,395 | INFO     | found 0 job(s) in 20 queues
[2026-01-28 18:24:20] 2026-01-28 17:23:45,396 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-28 18:24:20] 2026-01-28 17:23:45,396 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-28 18:24:20] 2026-01-28 17:24:11,812 | INFO     | [monitor] cgroup control has ended
[2026-01-28 18:24:20] 2026-01-28 17:24:12,345 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140471759955776)>', '<ExcThread(monitor, started 140471175202560)>']
[2026-01-28 18:24:20] 2026-01-28 17:24:12,556 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-28 18:24:20] 2026-01-28 17:24:12,556 | INFO     | [monitor] control thread has ended
[2026-01-28 18:24:20] 2026-01-28 17:24:17,370 | INFO     | all workflow threads have been joined
[2026-01-28 18:24:20] 2026-01-28 17:24:17,370 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-28 18:24:20] 2026-01-28 17:24:17,371 | INFO     | traces error code: 0
[2026-01-28 18:24:20] 2026-01-28 17:24:17,371 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-28 18:24:20] 2026-01-28 17:24:17,634 [wrapper] ==== pilot stdout END ====
[2026-01-28 18:24:20] 2026-01-28 17:24:17,728 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-28 18:24:20] 2026-01-28 17:24:17,862 [wrapper] pilotpid: 5254
[2026-01-28 18:24:20] 2026-01-28 17:24:17,954 [wrapper] Pilot exit status: 0
[2026-01-28 18:24:20] 2026-01-28 17:24:18,311 [wrapper] pandaids: 6984881772
[2026-01-28 18:24:20] 2026-01-28 17:24:19,188 [wrapper] cleanup supervisor_pilot 30786 5255
[2026-01-28 18:24:20] 2026-01-28 17:24:19,271 [wrapper] Test setup, not cleaning
[2026-01-28 18:24:20] 2026-01-28 17:24:19,367 [wrapper] apfmon messages muted
[2026-01-28 18:24:20] 2026-01-28 17:24:19,468 [wrapper] ==== wrapper stdout END ====
[2026-01-28 18:24:20] 2026-01-28 17:24:19,475 [wrapper] ==== wrapper stderr END ====
[2026-01-28 18:24:20]  *** Error codes and diagnostics ***
[2026-01-28 18:24:20]     "exeErrorCode": 0,
[2026-01-28 18:24:20]     "exeErrorDiag": "",
[2026-01-28 18:24:20]     "pilotErrorCode": 0,
[2026-01-28 18:24:20]     "pilotErrorDiag": "",
[2026-01-28 18:24:20]  *** Listing of results directory ***
[2026-01-28 18:24:20] total 734048
[2026-01-28 18:24:20] -rw-r--r--. 1 boinc boinc    584422 Jan 28 13:08 pilot3.tar.gz
[2026-01-28 18:24:20] -rw-r--r--. 1 boinc boinc      5111 Jan 28 13:20 queuedata.json
[2026-01-28 18:24:20] -rwx------. 1 boinc boinc     36322 Jan 28 13:20 runpilot2-wrapper.sh
[2026-01-28 18:24:20] -rw-r--r--. 1 boinc boinc       100 Jan 28 14:49 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-28 18:24:20] -rwxr-xr-x. 1 boinc boinc      7986 Jan 28 14:49 run_atlas
[2026-01-28 18:24:20] -rw-r--r--. 1 boinc boinc       105 Jan 28 14:49 job.xml
[2026-01-28 18:24:20] -rw-r--r--. 1 boinc boinc      6392 Jan 28 14:49 init_data.xml
[2026-01-28 18:24:20] -rw-r--r--. 2 boinc boinc 540035165 Jan 28 14:49 EVNT.48317969._000022.pool.root.1
[2026-01-28 18:24:20] -rw-r--r--. 2 boinc boinc     15845 Jan 28 14:49 start_atlas.sh
[2026-01-28 18:24:20] drwxrwx--x. 2 boinc boinc        68 Jan 28 14:49 shared
[2026-01-28 18:24:20] -rw-r--r--. 2 boinc boinc    597761 Jan 28 14:49 input.tar.gz
[2026-01-28 18:24:20] -rw-r--r--. 1 boinc boinc         0 Jan 28 14:49 boinc_lockfile
[2026-01-28 18:24:20] -rw-r--r--. 1 boinc boinc      2512 Jan 28 14:50 pandaJob.out
[2026-01-28 18:24:20] -rw-------. 1 boinc boinc       413 Jan 28 14:56 workernode_map.json
[2026-01-28 18:24:20] -rw-------. 1 boinc boinc   1005192 Jan 28 14:56 agis_schedconf.cvmfs.json
[2026-01-28 18:24:20] drwx------. 5 boinc boinc      4096 Jan 28 14:56 pilot3
[2026-01-28 18:24:20] -rw-------. 1 boinc boinc 203293688 Jan 28 18:21 HITS.48317971._001828.pool.root.1
[2026-01-28 18:24:20] -rw-r--r--. 1 boinc boinc       531 Jan 28 18:22 boinc_task_state.xml
[2026-01-28 18:24:20] -rw-------. 1 boinc boinc      1021 Jan 28 18:23 memory_monitor_summary.json
[2026-01-28 18:24:20] -rw-------. 1 boinc boinc   1516246 Jan 28 18:23 agis_ddmendpoints.agis.ALL.json
[2026-01-28 18:24:20] -rw-------. 1 boinc boinc    438981 Jan 28 18:23 log.48317971._001828.job.log.tgz.1
[2026-01-28 18:24:20] -rw-------. 1 boinc boinc      6320 Jan 28 18:23 heartbeat.json
[2026-01-28 18:24:20] -rw-------. 1 boinc boinc        95 Jan 28 18:23 pilot_heartbeat.json
[2026-01-28 18:24:20] -rw-r--r--. 1 boinc boinc      8192 Jan 28 18:24 boinc_mmap_file
[2026-01-28 18:24:20] -rw-r--r--. 1 boinc boinc        28 Jan 28 18:24 wrapper_checkpoint.txt
[2026-01-28 18:24:20] -rw-------. 1 boinc boinc      5066 Jan 28 18:24 pilotlog.txt
[2026-01-28 18:24:20] -rw-------. 1 boinc boinc   1762111 Jan 28 18:24 log.48317971._001828.job.log.1
[2026-01-28 18:24:20] -rw-------. 1 boinc boinc       357 Jan 28 18:24 output.list
[2026-01-28 18:24:20] -rw-r--r--. 1 boinc boinc       620 Jan 28 18:24 runtime_log
[2026-01-28 18:24:20] -rw-------. 1 boinc boinc   2222080 Jan 28 18:24 result.tar.gz
[2026-01-28 18:24:20] -rw-r--r--. 1 boinc boinc      8832 Jan 28 18:24 runtime_log.err
[2026-01-28 18:24:20] -rw-------. 1 boinc boinc       654 Jan 28 18:24 Rl0LDm0hJ58n9Rq4apOajLDm4fhM0noT9bVooX4SDmBcFKDme7CSVm.diag
[2026-01-28 18:24:20] -rw-r--r--. 1 boinc boinc     20645 Jan 28 18:24 stderr.txt
[2026-01-28 18:24:20] HITS file was successfully produced:
[2026-01-28 18:24:20] -rw-------. 1 boinc boinc 203293688 Jan 28 18:21 shared/HITS.pool.root.1
[2026-01-28 18:24:20]  *** Contents of shared directory: ***
[2026-01-28 18:24:20] total 728684
[2026-01-28 18:24:20] -rw-r--r--. 2 boinc boinc 540035165 Jan 28 14:49 ATLAS.root_0
[2026-01-28 18:24:20] -rw-r--r--. 2 boinc boinc     15845 Jan 28 14:49 start_atlas.sh
[2026-01-28 18:24:20] -rw-r--r--. 2 boinc boinc    597761 Jan 28 14:49 input.tar.gz
[2026-01-28 18:24:20] -rw-------. 1 boinc boinc 203293688 Jan 28 18:21 HITS.pool.root.1
[2026-01-28 18:24:20] -rw-------. 1 boinc boinc   2222080 Jan 28 18:24 result.tar.gz
18:24:22 (1251): run_atlas exited; CPU time 57321.313442
18:24:22 (1251): called boinc_finish(0)

</stderr_txt>
]]>

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