Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:12:41 (1817): wrapper (7.7.26015): starting
08:12:41 (1817): wrapper: running run_atlas (--nthreads 12)
[2026-01-28 08:12:42] Arguments: --nthreads 12
[2026-01-28 08:12:42] Threads: 12
[2026-01-28 08:12:42] Checking for CVMFS
[2026-01-28 08:12:42] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-28 08:12:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-28 08:12:42] Running cvmfs_config stat atlas.cern.ch
[2026-01-28 08:12:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-28 08:12:42] 2.11.2.0 2914 378446 94592 155622 2 188 15546950 20275200 1 130560 1 161289007 99.949 22883731 16564 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-28 08:12:42] CVMFS is ok
[2026-01-28 08:12:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-28 08:12:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-28 08:12:42] Further information can be found at the LHC@home message board.
[2026-01-28 08:12:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-28 08:12:42] Checking for apptainer binary...
[2026-01-28 08:12:42] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-28 08:12:42] Running /usr/bin/apptainer --version
[2026-01-28 08:12:42] apptainer version 1.3.2-1.el7
[2026-01-28 08:12:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-28 08:12:43] c-205-5.aglt2.org
[2026-01-28 08:12:43] apptainer works
[2026-01-28 08:12:43] Set ATHENA_PROC_NUMBER=12
[2026-01-28 08:12:43] Set ATHENA_CORE_NUMBER=12
[2026-01-28 08:12:43] Starting ATLAS job with PandaID=6984601058
[2026-01-28 08:12:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-28 09:35:18]  *** The last 200 lines of the pilot log: ***
[2026-01-28 09:35:18]  protocol_id=None
[2026-01-28 09:35:18]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-28 09:35:18]  replicas=None
[2026-01-28 09:35:18]  scope=mc23_13p6TeV
[2026-01-28 09:35:18]  status=None
[2026-01-28 09:35:18]  status_code=0
[2026-01-28 09:35:18]  storage_token=
[2026-01-28 09:35:18]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6984601058/log.48317971._001030.job.log.tgz.1
[2026-01-28 09:35:18]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/01/7b/log.48317971._001030.job.log.tgz.1
[2026-01-28 09:35:18]  workdir=None
[2026-01-28 09:35:18] ]
[2026-01-28 09:35:18] 2026-01-28 14:34:39,423 | INFO     | transferring file log.48317971._001030.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6984601058/log.48317971._001030.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-28 09:35:18] 2026-01-28 14:34:39,423 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6984601058/log.48317971._001030.job.log.tgz.1 /tmp/boinchome/slots/0/log.48317971._001030.job
[2026-01-28 09:35:18] 2026-01-28 14:34:39,446 | INFO     | adding to output.list: log.48317971._001030.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/01/7b/log.48317971._001030.job.log.tg
[2026-01-28 09:35:18] 2026-01-28 14:34:39,447 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-28 09:35:18] 2026-01-28 14:34:39,447 | INFO     | summary of transferred files:
[2026-01-28 09:35:18] 2026-01-28 14:34:39,447 | INFO     |  -- lfn=log.48317971._001030.job.log.tgz.1, status_code=0, status=transferred
[2026-01-28 09:35:18] 2026-01-28 14:34:39,447 | INFO     | stage-out finished correctly
[2026-01-28 09:35:18] 2026-01-28 14:34:39,651 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-28 09:35:18] 2026-01-28 14:34:39,953 | INFO     | job 6984601058 has state=finished
[2026-01-28 09:35:18] 2026-01-28 14:34:39,954 | INFO     | preparing for final server update for job 6984601058 in state='finished'
[2026-01-28 09:35:18] 2026-01-28 14:34:39,954 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-6984601058/jobReport.json
[2026-01-28 09:35:18] 2026-01-28 14:34:39,957 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-01-28 09:35:18] 2026-01-28 14:34:39,958 | INFO     | this job has now completed (state=finished)
[2026-01-28 09:35:18] 2026-01-28 14:34:39,958 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-28 09:35:18] 2026-01-28 14:34:39,958 | INFO     | log transfer has been attempted: DONE
[2026-01-28 09:35:18] 2026-01-28 14:34:39,958 | INFO     | job 6984601058 has finished - writing final server update
[2026-01-28 09:35:18] 2026-01-28 14:34:39,958 | INFO     | total number of processed events: 400 (read)
[2026-01-28 09:35:18] 2026-01-28 14:34:39,960 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6984601058/memory_monitor_summary.json (trf name=prmon)
[2026-01-28 09:35:18] 2026-01-28 14:34:39,961 | INFO     | extracted standard info from prmon json
[2026-01-28 09:35:18] 2026-01-28 14:34:39,961 | INFO     | extracted standard memory fields from prmon json
[2026-01-28 09:35:18] 2026-01-28 14:34:39,961 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-28 09:35:18] 2026-01-28 14:34:39,961 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-28 09:35:18] 2026-01-28 14:34:39,961 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-28 09:35:18] 2026-01-28 14:34:39,963 | INFO     | fitting pss+swap vs Time
[2026-01-28 09:35:18] 2026-01-28 14:34:39,963 | INFO     | sum of square deviations: 120605052.0
[2026-01-28 09:35:18] 2026-01-28 14:34:39,963 | INFO     | sum of deviations: 1856175100.0000005
[2026-01-28 09:35:18] 2026-01-28 14:34:39,963 | INFO     | mean x: 1769608510.0
[2026-01-28 09:35:18] 2026-01-28 14:34:39,963 | INFO     | mean y: 2970948.890410959
[2026-01-28 09:35:18] 2026-01-28 14:34:39,964 | INFO     | intersect: -27232233534.998886
[2026-01-28 09:35:18] 2026-01-28 14:34:39,964 | INFO     | chi2: 0.006998201959512707
[2026-01-28 09:35:18] 2026-01-28 14:34:39,964 | INFO     | current memory leak: 15.39 B/s (using 73 data points, chi2=0.01)
[2026-01-28 09:35:18] 2026-01-28 14:34:39,964 | INFO     | could have reported an average CPU frequency of 1740 MHz (6 samples)
[2026-01-28 09:35:18] 2026-01-28 14:34:39,964 | INFO     | ..............................
[2026-01-28 09:35:18] 2026-01-28 14:34:39,964 | INFO     | . Timing measurements:
[2026-01-28 09:35:18] 2026-01-28 14:34:39,965 | INFO     | . get job = 0 s
[2026-01-28 09:35:18] 2026-01-28 14:34:39,965 | INFO     | . initial setup = 7 s
[2026-01-28 09:35:18] 2026-01-28 14:34:39,965 | INFO     | . payload setup = 7 s
[2026-01-28 09:35:18] 2026-01-28 14:34:39,965 | INFO     | . stage-in = 0 s
[2026-01-28 09:35:18] 2026-01-28 14:34:39,965 | INFO     | . payload execution = 4870 s
[2026-01-28 09:35:18] 2026-01-28 14:34:39,965 | INFO     | . stage-out = 0 s
[2026-01-28 09:35:18] 2026-01-28 14:34:39,965 | INFO     | . log creation = 0 s
[2026-01-28 09:35:18] 2026-01-28 14:34:39,965 | INFO     | ..............................
[2026-01-28 09:35:18] 2026-01-28 14:34:40,043 | INFO     | 
[2026-01-28 09:35:18] 2026-01-28 14:34:40,043 | INFO     | job summary report
[2026-01-28 09:35:18] 2026-01-28 14:34:40,043 | INFO     | --------------------------------------------------
[2026-01-28 09:35:18] 2026-01-28 14:34:40,043 | INFO     | PanDA job id: 6984601058
[2026-01-28 09:35:18] 2026-01-28 14:34:40,043 | INFO     | task id: 48317971
[2026-01-28 09:35:18] 2026-01-28 14:34:40,044 | INFO     | errors: (none)
[2026-01-28 09:35:18] 2026-01-28 14:34:40,044 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-28 09:35:18] 2026-01-28 14:34:40,044 | INFO     | pilot state: finished 
[2026-01-28 09:35:18] 2026-01-28 14:34:40,044 | INFO     | transexitcode: 0
[2026-01-28 09:35:18] 2026-01-28 14:34:40,044 | INFO     | exeerrorcode: 0
[2026-01-28 09:35:18] 2026-01-28 14:34:40,044 | INFO     | exeerrordiag: 
[2026-01-28 09:35:18] 2026-01-28 14:34:40,045 | INFO     | exitcode: 0
[2026-01-28 09:35:18] 2026-01-28 14:34:40,045 | INFO     | exitmsg: OK
[2026-01-28 09:35:18] 2026-01-28 14:34:40,045 | INFO     | cpuconsumptiontime: 52284 s
[2026-01-28 09:35:18] 2026-01-28 14:34:40,045 | INFO     | nevents: 400
[2026-01-28 09:35:18] 2026-01-28 14:34:40,045 | INFO     | neventsw: 0
[2026-01-28 09:35:18] 2026-01-28 14:34:40,045 | INFO     | pid: 10062
[2026-01-28 09:35:18] 2026-01-28 14:34:40,045 | INFO     | pgrp: 10062
[2026-01-28 09:35:18] 2026-01-28 14:34:40,046 | INFO     | corecount: 12
[2026-01-28 09:35:18] 2026-01-28 14:34:40,046 | INFO     | event service: False
[2026-01-28 09:35:18] 2026-01-28 14:34:40,046 | INFO     | sizes: {0: 2284221, 11: 2284221, 4881: 2310428, 4884: 2319620}
[2026-01-28 09:35:18] 2026-01-28 14:34:40,046 | INFO     | --------------------------------------------------
[2026-01-28 09:35:18] 2026-01-28 14:34:40,046 | INFO     | 
[2026-01-28 09:35:18] 2026-01-28 14:34:40,047 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-28 09:35:18] 2026-01-28 14:34:40,072 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-28 09:35:18] 2026-01-28 14:34:40,072 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-28 09:35:18] 2026-01-28 14:34:40,072 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-28 09:35:18] 2026-01-28 14:34:40,072 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-28 09:35:18] 2026-01-28 14:34:40,072 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-28 09:35:18] 2026-01-28 14:34:40,072 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-28 09:35:18] 2026-01-28 14:34:40,073 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-28 09:35:18] 2026-01-28 14:34:40,073 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-28 09:35:18] 2026-01-28 14:34:40,073 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-28 09:35:18] 2026-01-28 14:34:40,073 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-28 09:35:18] 2026-01-28 14:34:40,073 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-28 09:35:18] 2026-01-28 14:34:40,073 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-28 09:35:18] 2026-01-28 14:34:40,074 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-28 09:35:18] 2026-01-28 14:34:40,074 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-28 09:35:18] 2026-01-28 14:34:40,074 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-28 09:35:18] 2026-01-28 14:34:40,074 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-28 09:35:18] 2026-01-28 14:34:40,074 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-28 09:35:18] 2026-01-28 14:34:40,074 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-28 09:35:18] 2026-01-28 14:34:40,074 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-28 09:35:18] 2026-01-28 14:34:40,075 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-28 09:35:18] 2026-01-28 14:34:40,075 | INFO     | job 6984601058 has completed (purged errors)
[2026-01-28 09:35:18] 2026-01-28 14:34:40,075 | INFO     | overall cleanup function is called
[2026-01-28 09:35:18] 2026-01-28 14:34:41,082 | INFO     | --- collectZombieJob: --- 10, [10062]
[2026-01-28 09:35:18] 2026-01-28 14:34:41,082 | INFO     | zombie collector waiting for pid 10062
[2026-01-28 09:35:18] 2026-01-28 14:34:41,082 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-28 09:35:18] 2026-01-28 14:34:41,083 | INFO     | collected zombie processes
[2026-01-28 09:35:18] 2026-01-28 14:34:41,083 | INFO     | will attempt to kill all subprocesses of pid=10062
[2026-01-28 09:35:18] 2026-01-28 14:34:41,175 | INFO     | process IDs to be killed: [10062] (in reverse order)
[2026-01-28 09:35:18] 2026-01-28 14:34:41,231 | WARNING  | found no corresponding commands to process id(s)
[2026-01-28 09:35:18] 2026-01-28 14:34:41,231 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-28 09:35:18] 2026-01-28 14:34:41,235 | INFO     | did not find any defunct processes belonging to 10062
[2026-01-28 09:35:18] 2026-01-28 14:34:41,238 | INFO     | did not find any defunct processes belonging to 10062
[2026-01-28 09:35:18] 2026-01-28 14:34:41,239 | INFO     | ready for new job
[2026-01-28 09:35:18] 2026-01-28 14:34:41,239 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-28 09:35:18] 2026-01-28 14:34:41,240 | INFO     | **************************************
[2026-01-28 09:35:18] 2026-01-28 14:34:41,240 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-28 09:35:18] 2026-01-28 14:34:41,240 | INFO     | **************************************
[2026-01-28 09:35:18] 2026-01-28 14:34:41,240 | INFO     | 
[2026-01-28 09:35:18] 2026-01-28 14:34:41,241 | INFO     | architecture information:
[2026-01-28 09:35:18] 2026-01-28 14:34:41,241 | INFO     | executing command: cat /etc/os-release
[2026-01-28 09:35:18] 2026-01-28 14:34:41,257 | INFO     | cat /etc/os-release:
[2026-01-28 09:35:18] NAME="CentOS Linux"
[2026-01-28 09:35:18] VERSION="7 (Core)"
[2026-01-28 09:35:18] ID="centos"
[2026-01-28 09:35:18] ID_LIKE="rhel fedora"
[2026-01-28 09:35:18] VERSION_ID="7"
[2026-01-28 09:35:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-28 09:35:18] ANSI_COLOR="0;31"
[2026-01-28 09:35:18] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-28 09:35:18] HOME_URL="https://www.centos.org/"
[2026-01-28 09:35:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-28 09:35:18] 
[2026-01-28 09:35:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-28 09:35:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-28 09:35:18] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-28 09:35:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-28 09:35:18] 
[2026-01-28 09:35:18] 2026-01-28 14:34:41,257 | INFO     | **************************************
[2026-01-28 09:35:18] 2026-01-28 14:34:41,759 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-28 09:35:18] 2026-01-28 14:34:41,775 | INFO     | sufficient remaining disk space (28719448064 B)
[2026-01-28 09:35:18] 2026-01-28 14:34:41,776 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-28 09:35:18] 2026-01-28 14:34:41,776 | INFO     | current server update state: UPDATING_FINAL
[2026-01-28 09:35:18] 2026-01-28 14:34:41,776 | INFO     | update_server=False
[2026-01-28 09:35:18] 2026-01-28 14:34:41,776 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-28 09:35:18] 2026-01-28 14:34:41,777 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-28 09:35:18] 2026-01-28 14:34:41,777 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-28 09:35:18] 2026-01-28 14:34:42,148 | INFO     | all payload control threads have been joined
[2026-01-28 09:35:18] 2026-01-28 14:34:42,253 | INFO     | all data control threads have been joined
[2026-01-28 09:35:18] 2026-01-28 14:34:42,460 | WARNING  | process 10062 can no longer be monitored (due to stat problems) - aborting
[2026-01-28 09:35:18] 2026-01-28 14:34:42,500 | INFO     | all job control threads have been joined
[2026-01-28 09:35:18] 2026-01-28 14:34:42,535 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-28 09:35:18] 2026-01-28 14:34:42,537 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-28 09:35:18] 2026-01-28 14:34:42,537 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-28 09:35:18] 2026-01-28 14:34:42,538 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-01-28 09:35:18] 2026-01-28 14:34:42,538 | WARNING  | maxPSS not found in memory monitor output
[2026-01-28 09:35:18] 2026-01-28 14:34:42,538 | INFO     | skipping file size check of payload stdout file (/tmp/boinchome/slots/0/PanDA_Pilot-6984601058/payload.stdout) since it has not been created yet
[2026-01-28 09:35:18] 2026-01-28 14:34:42,539 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-28 09:35:18] 2026-01-28 14:34:42,554 | INFO     | sufficient remaining disk space (28719448064 B)
[2026-01-28 09:35:18] 2026-01-28 14:34:42,554 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-01-28 09:35:18] 2026-01-28 14:34:42,555 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6984601058/HITS.48317971._001030.pool.root.1 since it does not exist
[2026-01-28 09:35:18] 2026-01-28 14:34:42,646 | INFO     | number of running child processes to parent process 10062: 1
[2026-01-28 09:35:18] 2026-01-28 14:34:42,646 | INFO     | maximum number of monitored processes: 6
[2026-01-28 09:35:18] 2026-01-28 14:34:42,646 | INFO     | aborting job monitoring since job object (job id=6984601058) has expired
[2026-01-28 09:35:18] 2026-01-28 14:34:42,646 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-28 09:35:18] 2026-01-28 14:34:42,646 | INFO     | will abort loop
[2026-01-28 09:35:18] 2026-01-28 14:34:42,782 | INFO     | [job] retrieve thread has finished
[2026-01-28 09:35:18] 2026-01-28 14:34:42,783 | INFO     | [job] queue monitor thread has finished
[2026-01-28 09:35:18] 2026-01-28 14:34:43,069 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-28 09:35:18] 2026-01-28 14:34:43,115 | INFO     | [payload] validate_post thread has finished
[2026-01-28 09:35:18] 2026-01-28 14:34:43,153 | INFO     | [payload] control thread has finished
[2026-01-28 09:35:18] 2026-01-28 14:34:43,189 | INFO     | [job] validate thread has finished
[2026-01-28 09:35:18] 2026-01-28 14:34:43,258 | INFO     | [data] control thread has finished
[2026-01-28 09:35:18] 2026-01-28 14:34:43,365 | INFO     | [job] create_data_payload thread has finished
[2026-01-28 09:35:18] 2026-01-28 14:34:43,506 | INFO     | [job] control thread has finished
[2026-01-28 09:35:18] 2026-01-28 14:34:43,572 | INFO     | [payload] validate_pre thread has finished
[2026-01-28 09:35:18] 2026-01-28 14:34:43,649 | INFO     | [job] job monitor thread has finished
[2026-01-28 09:35:18] 2026-01-28 14:34:43,855 | INFO     | [data] copytool_in thread has finished
[2026-01-28 09:35:18] 2026-01-28 14:34:43,873 | INFO     | [payload] failed_post thread has finished
[2026-01-28 09:35:18] 2026-01-28 14:34:44,236 | INFO     | [payload] execute_payloads thread has finished
[2026-01-28 09:35:18] 2026-01-28 14:34:44,541 | INFO     | [data] copytool_out thread has finished
[2026-01-28 09:35:18] 2026-01-28 14:34:45,783 | INFO     | [data] queue_monitor thread has finished
[2026-01-28 09:35:18] 2026-01-28 14:35:11,574 | INFO     | [monitor] cgroup control has ended
[2026-01-28 09:35:18] 2026-01-28 14:35:12,102 | INFO     | PID=5631 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-28 09:35:18] 2026-01-28 14:35:12,103 | INFO     | found 0 job(s) in 20 queues
[2026-01-28 09:35:18] 2026-01-28 14:35:12,103 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-28 09:35:18] 2026-01-28 14:35:12,103 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-28 09:35:18] 2026-01-28 14:35:12,786 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140316971276096)>', '<ExcThread(monitor, started 140316153726720)>']
[2026-01-28 09:35:18] 2026-01-28 14:35:13,108 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-28 09:35:18] 2026-01-28 14:35:13,108 | INFO     | [monitor] control thread has ended
[2026-01-28 09:35:18] 2026-01-28 14:35:17,812 | INFO     | all workflow threads have been joined
[2026-01-28 09:35:18] 2026-01-28 14:35:17,814 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-28 09:35:18] 2026-01-28 14:35:17,815 | INFO     | traces error code: 0
[2026-01-28 09:35:18] 2026-01-28 14:35:17,816 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-28 09:35:18] 2026-01-28 14:35:17,914 [wrapper] ==== pilot stdout END ====
[2026-01-28 09:35:18] 2026-01-28 14:35:17,917 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-28 09:35:18] 2026-01-28 14:35:17,921 [wrapper] pilotpid: 5631
[2026-01-28 09:35:18] 2026-01-28 14:35:17,925 [wrapper] Pilot exit status: 0
[2026-01-28 09:35:18] 2026-01-28 14:35:17,941 [wrapper] pandaids: 6984601058
[2026-01-28 09:35:18] 2026-01-28 14:35:17,982 [wrapper] cleanup supervisor_pilot 32565 5632
[2026-01-28 09:35:18] 2026-01-28 14:35:17,987 [wrapper] Test setup, not cleaning
[2026-01-28 09:35:18] 2026-01-28 14:35:17,991 [wrapper] apfmon messages muted
[2026-01-28 09:35:18] 2026-01-28 14:35:17,995 [wrapper] ==== wrapper stdout END ====
[2026-01-28 09:35:18] 2026-01-28 14:35:17,999 [wrapper] ==== wrapper stderr END ====
[2026-01-28 09:35:18]  *** Error codes and diagnostics ***
[2026-01-28 09:35:18]     "exeErrorCode": 0,
[2026-01-28 09:35:18]     "exeErrorDiag": "",
[2026-01-28 09:35:18]     "pilotErrorCode": 0,
[2026-01-28 09:35:18]     "pilotErrorDiag": "",
[2026-01-28 09:35:18]  *** Listing of results directory ***
[2026-01-28 09:35:18] total 715148
[2026-01-28 09:35:18] -rw-r--r-- 1 boincer umatlas    584422 Jan 28 07:08 pilot3.tar.gz
[2026-01-28 09:35:18] -rwx------ 1 boincer umatlas     36322 Jan 28 07:12 runpilot2-wrapper.sh
[2026-01-28 09:35:18] -rw-r--r-- 1 boincer umatlas      5111 Jan 28 07:15 queuedata.json
[2026-01-28 09:35:18] -rw-r--r-- 1 boincer umatlas       100 Jan 28 08:12 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-28 09:35:18] -rwxr-xr-x 1 boincer umatlas      7986 Jan 28 08:12 run_atlas
[2026-01-28 09:35:18] -rw-r--r-- 1 boincer umatlas       105 Jan 28 08:12 job.xml
[2026-01-28 09:35:18] -rw-r--r-- 2 boincer umatlas 531730274 Jan 28 08:12 EVNT.48317969._000039.pool.root.1
[2026-01-28 09:35:18] -rw-r--r-- 2 boincer umatlas    597755 Jan 28 08:12 input.tar.gz
[2026-01-28 09:35:18] -rw-r--r-- 2 boincer umatlas     15845 Jan 28 08:12 start_atlas.sh
[2026-01-28 09:35:18] drwxrwx--x 2 boincer umatlas      4096 Jan 28 08:12 shared
[2026-01-28 09:35:18] -rw-r--r-- 1 boincer umatlas         0 Jan 28 08:12 boinc_lockfile
[2026-01-28 09:35:18] -rw-r--r-- 1 boincer umatlas      2512 Jan 28 08:12 pandaJob.out
[2026-01-28 09:35:18] -rw------- 1 boincer umatlas        57 Jan 28 08:12 setup.sh.local
[2026-01-28 09:35:18] -rw------- 1 boincer umatlas   1005192 Jan 28 08:12 agis_schedconf.cvmfs.json
[2026-01-28 09:35:18] -rw------- 1 boincer umatlas   1516246 Jan 28 08:12 agis_ddmendpoints.agis.ALL.json
[2026-01-28 09:35:18] -rw------- 1 boincer umatlas       444 Jan 28 08:13 workernode_map.json
[2026-01-28 09:35:18] drwx------ 5 boincer umatlas      4096 Jan 28 08:13 pilot3
[2026-01-28 09:35:18] -rw-r--r-- 1 boincer umatlas      5951 Jan 28 09:30 init_data.xml
[2026-01-28 09:35:18] -rw------- 1 boincer umatlas 194439100 Jan 28 09:34 HITS.48317971._001030.pool.root.1
[2026-01-28 09:35:18] -rw-r--r-- 1 boincer umatlas       530 Jan 28 09:34 boinc_task_state.xml
[2026-01-28 09:35:18] -rw------- 1 boincer umatlas      1042 Jan 28 09:34 memory_monitor_summary.json
[2026-01-28 09:35:18] -rw------- 1 boincer umatlas    391245 Jan 28 09:34 log.48317971._001030.job.log.tgz.1
[2026-01-28 09:35:18] -rw------- 1 boincer umatlas      6401 Jan 28 09:34 heartbeat.json
[2026-01-28 09:35:18] -rw------- 1 boincer umatlas        95 Jan 28 09:35 pilot_heartbeat.json
[2026-01-28 09:35:18] -rw-r--r-- 1 boincer umatlas      8192 Jan 28 09:35 boinc_mmap_file
[2026-01-28 09:35:18] -rw-r--r-- 1 boincer umatlas        27 Jan 28 09:35 wrapper_checkpoint.txt
[2026-01-28 09:35:18] -rw------- 1 boincer umatlas      6222 Jan 28 09:35 pilotlog.txt
[2026-01-28 09:35:18] -rw------- 1 boincer umatlas    708585 Jan 28 09:35 log.48317971._001030.job.log.1
[2026-01-28 09:35:18] -rw------- 1 boincer umatlas       357 Jan 28 09:35 output.list
[2026-01-28 09:35:18] -rw-r--r-- 1 boincer umatlas       620 Jan 28 09:35 runtime_log
[2026-01-28 09:35:18] -rw------- 1 boincer umatlas   1116160 Jan 28 09:35 result.tar.gz
[2026-01-28 09:35:18] -rw------- 1 boincer umatlas       656 Jan 28 09:35 UmmLDmWaJ58n9Rq4apOajLDm4fhM0noT9bVooX4SDmxXFKDmvvOJyn.diag
[2026-01-28 09:35:18] -rw-r--r-- 1 boincer umatlas      9338 Jan 28 09:35 runtime_log.err
[2026-01-28 09:35:18] -rw-r--r-- 1 boincer umatlas     21944 Jan 28 09:35 stderr.txt
[2026-01-28 09:35:18] HITS file was successfully produced:
[2026-01-28 09:35:18] -rw------- 1 boincer umatlas 194439100 Jan 28 09:34 shared/HITS.pool.root.1
[2026-01-28 09:35:18]  *** Contents of shared directory: ***
[2026-01-28 09:35:18] total 710852
[2026-01-28 09:35:18] -rw-r--r-- 2 boincer umatlas 531730274 Jan 28 08:12 ATLAS.root_0
[2026-01-28 09:35:18] -rw-r--r-- 2 boincer umatlas    597755 Jan 28 08:12 input.tar.gz
[2026-01-28 09:35:18] -rw-r--r-- 2 boincer umatlas     15845 Jan 28 08:12 start_atlas.sh
[2026-01-28 09:35:18] -rw------- 1 boincer umatlas 194439100 Jan 28 09:34 HITS.pool.root.1
[2026-01-28 09:35:18] -rw------- 1 boincer umatlas   1116160 Jan 28 09:35 result.tar.gz
09:35:19 (1817): run_atlas exited; CPU time 52270.434423
09:35:19 (1817): called boinc_finish(0)

</stderr_txt>
]]>

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