Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:20:28 (12598): wrapper (7.7.26015): starting
16:20:28 (12598): wrapper: running run_atlas (--nthreads 8)
[2026-01-28 16:20:28] Arguments: --nthreads 8
[2026-01-28 16:20:28] Threads: 8
[2026-01-28 16:20:28] Checking for CVMFS
[2026-01-28 16:20:29] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-28 16:20:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-28 16:20:33] Running cvmfs_config stat atlas.cern.ch
[2026-01-28 16:20:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-28 16:20:35] 2.11.2.0 5913 62930 136744 155622 3 251 19868753 25165825 885 130560 0 22725794 99.793 17196119 2588 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-28 16:20:35] CVMFS is ok
[2026-01-28 16:20:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-28 16:20:35] Checking for apptainer binary...
[2026-01-28 16:20:35] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-28 16:20:35] Running /usr/bin/apptainer --version
[2026-01-28 16:20:35] apptainer version 1.3.2-1.el7
[2026-01-28 16:20:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-28 16:20:43] cg-vwn443.simple-grid.lan
[2026-01-28 16:20:43] apptainer works
[2026-01-28 16:20:43] Set ATHENA_PROC_NUMBER=8
[2026-01-28 16:20:43] Set ATHENA_CORE_NUMBER=8
[2026-01-28 16:20:44] Starting ATLAS job with PandaID=6985348984
[2026-01-28 16:20:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-28 21:02:10]  *** The last 200 lines of the pilot log: ***
[2026-01-28 21:02:10] 2026-01-28 20:00:56,447 | INFO     | total number of processed events: 400 (read)
[2026-01-28 21:02:10] 2026-01-28 20:00:56,449 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6985348984/memory_monitor_summary.json (trf name=prmon)
[2026-01-28 21:02:10] 2026-01-28 20:00:56,453 | INFO     | extracted standard info from prmon json
[2026-01-28 21:02:10] 2026-01-28 20:00:56,453 | INFO     | extracted standard memory fields from prmon json
[2026-01-28 21:02:10] 2026-01-28 20:00:56,454 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-28 21:02:10] 2026-01-28 20:00:56,454 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-28 21:02:10] 2026-01-28 20:00:56,454 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-28 21:02:10] 2026-01-28 20:00:56,462 | INFO     | fitting pss+swap vs Time
[2026-01-28 21:02:10] 2026-01-28 20:00:56,463 | INFO     | sum of square deviations: 5705372090.0
[2026-01-28 21:02:10] 2026-01-28 20:00:56,466 | INFO     | sum of deviations: 195233060230.99994
[2026-01-28 21:02:10] 2026-01-28 20:00:56,466 | INFO     | mean x: 1769622371.5
[2026-01-28 21:02:10] 2026-01-28 20:00:56,466 | INFO     | mean y: 2696514.1818181816
[2026-01-28 21:02:10] 2026-01-28 20:00:56,466 | INFO     | intersect: -60552300704.445595
[2026-01-28 21:02:10] 2026-01-28 20:00:56,467 | INFO     | chi2: 8.573323159335603
[2026-01-28 21:02:10] 2026-01-28 20:00:56,467 | INFO     | sum of square deviations: 5387301010.0
[2026-01-28 21:02:10] 2026-01-28 20:00:56,470 | INFO     | sum of deviations: 210204812757.0
[2026-01-28 21:02:10] 2026-01-28 20:00:56,470 | INFO     | mean x: 1769622219.0
[2026-01-28 21:02:10] 2026-01-28 20:00:56,470 | INFO     | mean y: 2703551.16988417
[2026-01-28 21:02:10] 2026-01-28 20:00:56,470 | INFO     | intersect: -69045435118.8321
[2026-01-28 21:02:10] 2026-01-28 20:00:56,471 | INFO     | chi2: 7.892564028628276
[2026-01-28 21:02:10] 2026-01-28 20:00:56,471 | INFO     | current chi2=7.892564028628276 (change=7.940434742227574 %)
[2026-01-28 21:02:10] 2026-01-28 20:00:56,471 | INFO     | right removable region: 258
[2026-01-28 21:02:10] 2026-01-28 20:00:56,471 | INFO     | sum of square deviations: 5387301010.0
[2026-01-28 21:02:10] 2026-01-28 20:00:56,474 | INFO     | sum of deviations: 92409872462.0
[2026-01-28 21:02:10] 2026-01-28 20:00:56,474 | INFO     | mean x: 1769622524.0
[2026-01-28 21:02:10] 2026-01-28 20:00:56,474 | INFO     | mean y: 2745790.077220077
[2026-01-28 21:02:10] 2026-01-28 20:00:56,474 | INFO     | intersect: -30352081505.664055
[2026-01-28 21:02:10] 2026-01-28 20:00:56,475 | INFO     | chi2: 3.5356528661060156
[2026-01-28 21:02:10] 2026-01-28 20:00:56,475 | INFO     | current chi2=3.5356528661060156 (change=58.75983209315984 %)
[2026-01-28 21:02:10] 2026-01-28 20:00:56,475 | INFO     | sum of square deviations: 5081276667.5
[2026-01-28 21:02:10] 2026-01-28 20:00:56,478 | INFO     | sum of deviations: 15873867618.0
[2026-01-28 21:02:10] 2026-01-28 20:00:56,478 | INFO     | mean x: 1769622676.5
[2026-01-28 21:02:10] 2026-01-28 20:00:56,478 | INFO     | mean y: 2783880.3385826773
[2026-01-28 21:02:10] 2026-01-28 20:00:56,478 | INFO     | intersect: -5525503189.767473
[2026-01-28 21:02:10] 2026-01-28 20:00:56,478 | INFO     | chi2: 0.9494515881221379
[2026-01-28 21:02:10] 2026-01-28 20:00:56,479 | INFO     | current chi2=0.9494515881221379 (change=73.14635729022191 %)
[2026-01-28 21:02:10] 2026-01-28 20:00:56,479 | INFO     | sum of square deviations: 4787066500.0
[2026-01-28 21:02:10] 2026-01-28 20:00:56,481 | INFO     | sum of deviations: -4901641763.000002
[2026-01-28 21:02:10] 2026-01-28 20:00:56,482 | INFO     | mean x: 1769622829.0
[2026-01-28 21:02:10] 2026-01-28 20:00:56,482 | INFO     | mean y: 2794614.1526104417
[2026-01-28 21:02:10] 2026-01-28 20:00:56,482 | INFO     | intersect: 1814772192.3593497
[2026-01-28 21:02:10] 2026-01-28 20:00:56,482 | INFO     | chi2: 0.7568013923805881
[2026-01-28 21:02:10] 2026-01-28 20:00:56,483 | INFO     | current chi2=0.7568013923805881 (change=20.290681289246233 %)
[2026-01-28 21:02:10] 2026-01-28 20:00:56,483 | INFO     | left removable region: 30
[2026-01-28 21:02:10] 2026-01-28 20:00:56,483 | INFO     | sum of square deviations: 3675146117.0
[2026-01-28 21:02:10] 2026-01-28 20:00:56,485 | INFO     | sum of deviations: 6693611618.000001
[2026-01-28 21:02:10] 2026-01-28 20:00:56,485 | INFO     | mean x: 1769623103.5
[2026-01-28 21:02:10] 2026-01-28 20:00:56,486 | INFO     | mean y: 2807634.1052631577
[2026-01-28 21:02:10] 2026-01-28 20:00:56,486 | INFO     | intersect: -3220239664.688386
[2026-01-28 21:02:10] 2026-01-28 20:00:56,486 | INFO     | chi2: 0.000225726378757069
[2026-01-28 21:02:10] 2026-01-28 20:00:56,486 | INFO     | current memory leak: 1.82 B/s (using 228 data points, chi2=0.00)
[2026-01-28 21:02:10] 2026-01-28 20:00:56,487 | INFO     | could have reported an average CPU frequency of 1999 MHz (13 samples)
[2026-01-28 21:02:10] 2026-01-28 20:00:56,487 | INFO     | ..............................
[2026-01-28 21:02:10] 2026-01-28 20:00:56,487 | INFO     | . Timing measurements:
[2026-01-28 21:02:10] 2026-01-28 20:00:56,487 | INFO     | . get job = 0 s
[2026-01-28 21:02:10] 2026-01-28 20:00:56,488 | INFO     | . initial setup = 120 s
[2026-01-28 21:02:10] 2026-01-28 20:00:56,488 | INFO     | . payload setup = 147 s
[2026-01-28 21:02:10] 2026-01-28 20:00:56,488 | INFO     | . stage-in = 0 s
[2026-01-28 21:02:10] 2026-01-28 20:00:56,488 | INFO     | . payload execution = 16229 s
[2026-01-28 21:02:10] 2026-01-28 20:00:56,488 | INFO     | . stage-out = 4 s
[2026-01-28 21:02:10] 2026-01-28 20:00:56,488 | INFO     | . log creation = 1 s
[2026-01-28 21:02:10] 2026-01-28 20:00:56,488 | INFO     | ..............................
[2026-01-28 21:02:10] 2026-01-28 20:00:56,614 | INFO     | 
[2026-01-28 21:02:10] 2026-01-28 20:00:56,614 | INFO     | job summary report
[2026-01-28 21:02:10] 2026-01-28 20:00:56,614 | INFO     | --------------------------------------------------
[2026-01-28 21:02:10] 2026-01-28 20:00:56,615 | INFO     | PanDA job id: 6985348984
[2026-01-28 21:02:10] 2026-01-28 20:00:56,615 | INFO     | task id: 48317872
[2026-01-28 21:02:10] 2026-01-28 20:00:56,615 | INFO     | errors: (none)
[2026-01-28 21:02:10] 2026-01-28 20:00:56,615 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-28 21:02:10] 2026-01-28 20:00:56,615 | INFO     | pilot state: finished 
[2026-01-28 21:02:10] 2026-01-28 20:00:56,615 | INFO     | transexitcode: 0
[2026-01-28 21:02:10] 2026-01-28 20:00:56,615 | INFO     | exeerrorcode: 0
[2026-01-28 21:02:10] 2026-01-28 20:00:56,615 | INFO     | exeerrordiag: 
[2026-01-28 21:02:10] 2026-01-28 20:00:56,615 | INFO     | exitcode: 0
[2026-01-28 21:02:10] 2026-01-28 20:00:56,616 | INFO     | exitmsg: OK
[2026-01-28 21:02:10] 2026-01-28 20:00:56,616 | INFO     | cpuconsumptiontime: 58840 s
[2026-01-28 21:02:10] 2026-01-28 20:00:56,616 | INFO     | nevents: 400
[2026-01-28 21:02:10] 2026-01-28 20:00:56,616 | INFO     | neventsw: 0
[2026-01-28 21:02:10] 2026-01-28 20:00:56,616 | INFO     | pid: 21125
[2026-01-28 21:02:10] 2026-01-28 20:00:56,616 | INFO     | pgrp: 21125
[2026-01-28 21:02:10] 2026-01-28 20:00:56,616 | INFO     | corecount: 8
[2026-01-28 21:02:10] 2026-01-28 20:00:56,616 | INFO     | event service: False
[2026-01-28 21:02:10] 2026-01-28 20:00:56,616 | INFO     | sizes: {0: 2283144, 1: 2283829, 2: 2284290, 12: 2284290, 16382: 2315696, 16383: 2315695, 16388: 2324877, 16389: 2324933, 16392: 2325127}
[2026-01-28 21:02:10] 2026-01-28 20:00:56,616 | INFO     | --------------------------------------------------
[2026-01-28 21:02:10] 2026-01-28 20:00:56,617 | INFO     | 
[2026-01-28 21:02:10] 2026-01-28 20:00:56,617 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2026-01-28 21:02:10] 2026-01-28 20:00:57,116 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-28 21:02:10] 2026-01-28 20:00:57,117 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-28 21:02:10] 2026-01-28 20:00:57,117 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-28 21:02:10] 2026-01-28 20:00:57,117 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-28 21:02:10] 2026-01-28 20:00:57,117 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-28 21:02:10] 2026-01-28 20:00:57,117 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-28 21:02:10] 2026-01-28 20:00:57,117 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-28 21:02:10] 2026-01-28 20:00:57,117 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-28 21:02:10] 2026-01-28 20:00:57,118 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-28 21:02:10] 2026-01-28 20:00:57,118 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-28 21:02:10] 2026-01-28 20:00:57,118 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-28 21:02:10] 2026-01-28 20:00:57,118 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-28 21:02:10] 2026-01-28 20:00:57,118 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-28 21:02:10] 2026-01-28 20:00:57,118 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-28 21:02:10] 2026-01-28 20:00:57,118 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-28 21:02:10] 2026-01-28 20:00:57,118 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-28 21:02:10] 2026-01-28 20:00:57,118 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-28 21:02:10] 2026-01-28 20:00:57,119 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-28 21:02:10] 2026-01-28 20:00:57,119 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-28 21:02:10] 2026-01-28 20:00:57,119 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-28 21:02:10] 2026-01-28 20:00:57,119 | INFO     | job 6985348984 has completed (purged errors)
[2026-01-28 21:02:10] 2026-01-28 20:00:57,119 | INFO     | overall cleanup function is called
[2026-01-28 21:02:10] 2026-01-28 20:00:58,129 | INFO     | --- collectZombieJob: --- 10, [21125]
[2026-01-28 21:02:10] 2026-01-28 20:00:58,129 | INFO     | zombie collector waiting for pid 21125
[2026-01-28 21:02:10] 2026-01-28 20:00:58,129 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-28 21:02:10] 2026-01-28 20:00:58,129 | INFO     | collected zombie processes
[2026-01-28 21:02:10] 2026-01-28 20:00:58,129 | INFO     | will attempt to kill all subprocesses of pid=21125
[2026-01-28 21:02:10] 2026-01-28 20:00:58,218 | INFO     | process IDs to be killed: [21125] (in reverse order)
[2026-01-28 21:02:10] 2026-01-28 20:00:59,084 | WARNING  | found no corresponding commands to process id(s)
[2026-01-28 21:02:10] 2026-01-28 20:00:59,085 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-28 21:02:10] 2026-01-28 20:00:59,087 | INFO     | did not find any defunct processes belonging to 21125
[2026-01-28 21:02:10] 2026-01-28 20:00:59,088 | INFO     | did not find any defunct processes belonging to 21125
[2026-01-28 21:02:10] 2026-01-28 20:00:59,089 | INFO     | ready for new job
[2026-01-28 21:02:10] 2026-01-28 20:00:59,089 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-28 21:02:10] 2026-01-28 20:00:59,091 | INFO     | **************************************
[2026-01-28 21:02:10] 2026-01-28 20:00:59,091 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-28 21:02:10] 2026-01-28 20:00:59,091 | INFO     | **************************************
[2026-01-28 21:02:10] 2026-01-28 20:00:59,091 | INFO     | 
[2026-01-28 21:02:10] 2026-01-28 20:00:59,092 | INFO     | pilot is running in a VM
[2026-01-28 21:02:10] 2026-01-28 20:00:59,092 | INFO     | architecture information:
[2026-01-28 21:02:10] 2026-01-28 20:00:59,105 | INFO     | executing command: cat /etc/os-release
[2026-01-28 21:02:10] 2026-01-28 20:00:59,429 | INFO     | cat /etc/os-release:
[2026-01-28 21:02:10] NAME="CentOS Linux"
[2026-01-28 21:02:10] VERSION="7 (Core)"
[2026-01-28 21:02:10] ID="centos"
[2026-01-28 21:02:10] ID_LIKE="rhel fedora"
[2026-01-28 21:02:10] VERSION_ID="7"
[2026-01-28 21:02:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-28 21:02:10] ANSI_COLOR="0;31"
[2026-01-28 21:02:10] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-28 21:02:10] HOME_URL="https://www.centos.org/"
[2026-01-28 21:02:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-28 21:02:10] 
[2026-01-28 21:02:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-28 21:02:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-28 21:02:10] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-28 21:02:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-28 21:02:10] 
[2026-01-28 21:02:10] 2026-01-28 20:00:59,430 | INFO     | **************************************
[2026-01-28 21:02:10] 2026-01-28 20:00:59,937 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2026-01-28 21:02:10] 2026-01-28 20:01:00,244 | INFO     | sufficient remaining disk space (495731081216 B)
[2026-01-28 21:02:10] 2026-01-28 20:01:00,245 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-28 21:02:10] 2026-01-28 20:01:00,245 | INFO     | current server update state: UPDATING_FINAL
[2026-01-28 21:02:10] 2026-01-28 20:01:00,245 | INFO     | update_server=False
[2026-01-28 21:02:10] 2026-01-28 20:01:00,245 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-28 21:02:10] 2026-01-28 20:01:00,246 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-28 21:02:10] 2026-01-28 20:01:00,255 | INFO     | all payload control threads have been joined
[2026-01-28 21:02:10] 2026-01-28 20:01:00,386 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-28 21:02:10] 2026-01-28 20:01:00,523 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-28 21:02:10] 2026-01-28 20:01:00,523 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-28 21:02:10] 2026-01-28 20:01:00,523 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-28 21:02:10] 2026-01-28 20:01:00,523 | INFO     | will abort loop
[2026-01-28 21:02:10] 2026-01-28 20:01:00,907 | INFO     | all data control threads have been joined
[2026-01-28 21:02:10] 2026-01-28 20:01:01,183 | INFO     | all job control threads have been joined
[2026-01-28 21:02:10] 2026-01-28 20:01:01,251 | INFO     | [job] retrieve thread has finished
[2026-01-28 21:02:10] 2026-01-28 20:01:01,261 | INFO     | [payload] control thread has finished
[2026-01-28 21:02:10] 2026-01-28 20:01:01,529 | INFO     | [job] job monitor thread has finished
[2026-01-28 21:02:10] 2026-01-28 20:01:01,630 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-28 21:02:10] 2026-01-28 20:01:01,769 | INFO     | [payload] failed_post thread has finished
[2026-01-28 21:02:10] 2026-01-28 20:01:01,886 | INFO     | [payload] validate_pre thread has finished
[2026-01-28 21:02:10] 2026-01-28 20:01:01,893 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-28 21:02:10] 2026-01-28 20:01:01,893 | INFO     | [job] validate thread has finished
[2026-01-28 21:02:10] 2026-01-28 20:01:01,913 | INFO     | [data] control thread has finished
[2026-01-28 21:02:10] 2026-01-28 20:01:02,149 | INFO     | [data] copytool_in thread has finished
[2026-01-28 21:02:10] 2026-01-28 20:01:02,189 | INFO     | [job] control thread has finished
[2026-01-28 21:02:10] 2026-01-28 20:01:02,393 | INFO     | [data] copytool_out thread has finished
[2026-01-28 21:02:10] 2026-01-28 20:01:02,398 | INFO     | [job] create_data_payload thread has finished
[2026-01-28 21:02:10] 2026-01-28 20:01:02,612 | INFO     | [payload] validate_post thread has finished
[2026-01-28 21:02:10] 2026-01-28 20:01:02,636 | INFO     | [job] queue monitor thread has finished
[2026-01-28 21:02:10] 2026-01-28 20:01:02,640 | INFO     | [payload] execute_payloads thread has finished
[2026-01-28 21:02:10] 2026-01-28 20:01:04,255 | INFO     | [data] queue_monitor thread has finished
[2026-01-28 21:02:10] 2026-01-28 20:01:28,335 | INFO     | PID=16675 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-28 21:02:10] 2026-01-28 20:01:28,335 | INFO     | .. there are 2 such processes running
[2026-01-28 21:02:10] 2026-01-28 20:01:28,337 | INFO     | found 0 job(s) in 20 queues
[2026-01-28 21:02:10] 2026-01-28 20:01:28,337 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-28 21:02:10] 2026-01-28 20:01:28,337 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-28 21:02:10] 2026-01-28 20:01:59,967 | INFO     | [monitor] cgroup control has ended
[2026-01-28 21:02:10] 2026-01-28 20:02:00,281 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140664355338048)>', '<ExcThread(monitor, started 140663760856832)>']
[2026-01-28 21:02:10] 2026-01-28 20:02:00,528 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-28 21:02:10] 2026-01-28 20:02:00,528 | INFO     | [monitor] control thread has ended
[2026-01-28 21:02:10] 2026-01-28 20:02:05,307 | INFO     | all workflow threads have been joined
[2026-01-28 21:02:10] 2026-01-28 20:02:05,307 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-28 21:02:10] 2026-01-28 20:02:05,307 | INFO     | traces error code: 0
[2026-01-28 21:02:10] 2026-01-28 20:02:05,308 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-28 21:02:10] 2026-01-28 20:02:05,671 [wrapper] ==== pilot stdout END ====
[2026-01-28 21:02:10] 2026-01-28 20:02:05,771 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-28 21:02:10] 2026-01-28 20:02:05,890 [wrapper] pilotpid: 16675
[2026-01-28 21:02:10] 2026-01-28 20:02:05,997 [wrapper] Pilot exit status: 0
[2026-01-28 21:02:10] 2026-01-28 20:02:06,531 [wrapper] pandaids: 6985348984
[2026-01-28 21:02:10] 2026-01-28 20:02:07,668 [wrapper] cleanup supervisor_pilot 28305 16676
[2026-01-28 21:02:10] 2026-01-28 20:02:07,733 [wrapper] Test setup, not cleaning
[2026-01-28 21:02:10] 2026-01-28 20:02:07,801 [wrapper] apfmon messages muted
[2026-01-28 21:02:10] 2026-01-28 20:02:07,881 [wrapper] ==== wrapper stdout END ====
[2026-01-28 21:02:10] 2026-01-28 20:02:08,003 [wrapper] ==== wrapper stderr END ====
[2026-01-28 21:02:10]  *** Error codes and diagnostics ***
[2026-01-28 21:02:10]     "exeErrorCode": 0,
[2026-01-28 21:02:10]     "exeErrorDiag": "",
[2026-01-28 21:02:10]     "pilotErrorCode": 0,
[2026-01-28 21:02:10]     "pilotErrorDiag": "",
[2026-01-28 21:02:10]  *** Listing of results directory ***
[2026-01-28 21:02:10] total 673996
[2026-01-28 21:02:10] -rwx------. 1 boinc boinc     36322 Jan 28 13:29 runpilot2-wrapper.sh
[2026-01-28 21:02:10] -rw-r--r--. 1 boinc boinc    584422 Jan 28 13:33 pilot3.tar.gz
[2026-01-28 21:02:10] -rw-r--r--. 1 boinc boinc      5111 Jan 28 13:35 queuedata.json
[2026-01-28 21:02:10] -rw-r--r--. 1 boinc boinc       100 Jan 28 16:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-28 21:02:10] -rwxr-xr-x. 1 boinc boinc      7986 Jan 28 16:20 run_atlas
[2026-01-28 21:02:10] -rw-r--r--. 1 boinc boinc       105 Jan 28 16:20 job.xml
[2026-01-28 21:02:10] -rw-r--r--. 1 boinc boinc      6390 Jan 28 16:20 init_data.xml
[2026-01-28 21:02:10] -rw-r--r--. 2 boinc boinc 492304171 Jan 28 16:20 EVNT.48317869._000113.pool.root.1
[2026-01-28 21:02:10] -rw-r--r--. 2 boinc boinc     15845 Jan 28 16:20 start_atlas.sh
[2026-01-28 21:02:10] drwxrwx--x. 2 boinc boinc        68 Jan 28 16:20 shared
[2026-01-28 21:02:10] -rw-r--r--. 2 boinc boinc    597755 Jan 28 16:20 input.tar.gz
[2026-01-28 21:02:10] -rw-r--r--. 1 boinc boinc         0 Jan 28 16:20 boinc_lockfile
[2026-01-28 21:02:10] -rw-r--r--. 1 boinc boinc      2515 Jan 28 16:20 pandaJob.out
[2026-01-28 21:02:10] -rw-------. 1 boinc boinc       415 Jan 28 16:27 workernode_map.json
[2026-01-28 21:02:10] -rw-------. 1 boinc boinc   1005192 Jan 28 16:27 agis_schedconf.cvmfs.json
[2026-01-28 21:02:10] drwx------. 5 boinc boinc      4096 Jan 28 16:27 pilot3
[2026-01-28 21:02:10] -rw-------. 1 boinc boinc 188247061 Jan 28 20:59 HITS.48317872._005667.pool.root.1
[2026-01-28 21:02:10] -rw-r--r--. 1 boinc boinc       532 Jan 28 20:59 boinc_task_state.xml
[2026-01-28 21:02:10] -rw-------. 1 boinc boinc      1009 Jan 28 21:00 memory_monitor_summary.json
[2026-01-28 21:02:10] -rw-------. 1 boinc boinc   1516246 Jan 28 21:00 agis_ddmendpoints.agis.ALL.json
[2026-01-28 21:02:10] -rw-------. 1 boinc boinc    529045 Jan 28 21:00 log.48317872._005667.job.log.tgz.1
[2026-01-28 21:02:10] -rw-------. 1 boinc boinc      6312 Jan 28 21:00 heartbeat.json
[2026-01-28 21:02:10] -rw-------. 1 boinc boinc        95 Jan 28 21:01 pilot_heartbeat.json
[2026-01-28 21:02:10] -rw-------. 1 boinc boinc      5066 Jan 28 21:02 pilotlog.txt
[2026-01-28 21:02:10] -rw-------. 1 boinc boinc   2315416 Jan 28 21:02 log.48317872._005667.job.log.1
[2026-01-28 21:02:10] -rw-------. 1 boinc boinc       357 Jan 28 21:02 output.list
[2026-01-28 21:02:10] -rw-r--r--. 1 boinc boinc       620 Jan 28 21:02 runtime_log
[2026-01-28 21:02:10] -rw-------. 1 boinc boinc   2867200 Jan 28 21:02 result.tar.gz
[2026-01-28 21:02:10] -rw-r--r--. 1 boinc boinc      8192 Jan 28 21:02 boinc_mmap_file
[2026-01-28 21:02:10] -rw-r--r--. 1 boinc boinc        28 Jan 28 21:02 wrapper_checkpoint.txt
[2026-01-28 21:02:10] -rw-------. 1 boinc boinc       655 Jan 28 21:02 YEQKDmcqJ58nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmvyFKDmHlpf4n.diag
[2026-01-28 21:02:10] -rw-r--r--. 1 boinc boinc      8816 Jan 28 21:02 runtime_log.err
[2026-01-28 21:02:10] -rw-r--r--. 1 boinc boinc     20735 Jan 28 21:02 stderr.txt
[2026-01-28 21:02:10] HITS file was successfully produced:
[2026-01-28 21:02:10] -rw-------. 1 boinc boinc 188247061 Jan 28 20:59 shared/HITS.pool.root.1
[2026-01-28 21:02:10]  *** Contents of shared directory: ***
[2026-01-28 21:02:10] total 668004
[2026-01-28 21:02:10] -rw-r--r--. 2 boinc boinc 492304171 Jan 28 16:20 ATLAS.root_0
[2026-01-28 21:02:10] -rw-r--r--. 2 boinc boinc     15845 Jan 28 16:20 start_atlas.sh
[2026-01-28 21:02:10] -rw-r--r--. 2 boinc boinc    597755 Jan 28 16:20 input.tar.gz
[2026-01-28 21:02:10] -rw-------. 1 boinc boinc 188247061 Jan 28 20:59 HITS.pool.root.1
[2026-01-28 21:02:10] -rw-------. 1 boinc boinc   2867200 Jan 28 21:02 result.tar.gz
21:02:12 (12598): run_atlas exited; CPU time 59021.433284
21:02:12 (12598): called boinc_finish(0)

</stderr_txt>
]]>

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