Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
2026-01-29 02:37:49 (44694): vboxwrapper version 26210
2026-01-29 02:37:49 (44694): BOINC client version: 8.2.5
2026-01-29 02:37:50 (44694): Detected: VirtualBox VboxManage Interface (Version: 7.1.14)
2026-01-29 02:37:50 (44694): Detected: Sandbox Configuration Enabled
2026-01-29 02:37:50 (44694): Successfully copied 'init_data.xml' to the shared directory.
2026-01-29 02:37:50 (44694): Create VM. (boinc_6ed6d2a3c28e54e0, slot#1)
2026-01-29 02:37:50 (44694): Setting Memory Size for VM. (4100MB)
2026-01-29 02:37:50 (44694): Setting CPU Count for VM. (1)
2026-01-29 02:37:50 (44694): Setting Chipset Options for VM.
2026-01-29 02:37:50 (44694): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-01-29 02:37:50 (44694): Setting Boot Options for VM.
2026-01-29 02:37:50 (44694): Setting Network Configuration for NAT. (Driver: virtio)
2026-01-29 02:37:50 (44694): Enabling VM Network Access.
2026-01-29 02:37:50 (44694): Disabling USB Support for VM.
2026-01-29 02:37:50 (44694): Disabling COM Port Support for VM.
2026-01-29 02:37:50 (44694): Disabling Audio Support for VM.
2026-01-29 02:37:50 (44694): Disabling Clipboard Support for VM.
2026-01-29 02:37:50 (44694): Disabling Drag and Drop Support for VM.
2026-01-29 02:37:50 (44694): Adding storage controller(s) to VM.
2026-01-29 02:37:51 (44694): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-01-29 02:37:51 (44694): Adding VirtualBox Guest Additions to VM.
2026-01-29 02:37:51 (44694): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-01-29 02:37:51 (44694): forwarding host port 62324 to guest port 80
2026-01-29 02:37:51 (44694): Enabling remote desktop for VM.
2026-01-29 02:37:51 (44694): Required extension pack not installed, remote desktop not enabled.
2026-01-29 02:37:51 (44694): Enabling shared directory for VM.
2026-01-29 02:37:51 (44694): Starting VM using VBoxManage interface. (boinc_6ed6d2a3c28e54e0, slot#1)
2026-01-29 02:37:56 (44694): Successfully started VM. (PID = '44767')
2026-01-29 02:37:56 (44694): Reporting VM Process ID to BOINC.
2026-01-29 02:37:56 (44694): Guest Log: BIOS: VirtualBox 7.1.14
2026-01-29 02:37:56 (44694): Guest Log: CPUID EDX: 0x178bfbff
2026-01-29 02:37:56 (44694): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-01-29 02:37:56 (44694): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-01-29 02:37:56 (44694): VM state change detected. (old = 'poweredoff', new = 'running')
2026-01-29 02:37:56 (44694): Detected: Web Application Enabled (http://localhost:62324)
2026-01-29 02:37:56 (44694): Preference change detected
2026-01-29 02:37:56 (44694): Setting CPU throttle for VM. (100%)
2026-01-29 02:37:56 (44694): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-01-29 02:37:58 (44694): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-01-29 02:37:58 (44694): Guest Log: BIOS: Booting from Hard Disk...
2026-01-29 02:38:02 (44694): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-01-29 02:38:02 (44694): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-01-29 02:38:02 (44694): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-01-29 02:38:02 (44694): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-01-29 02:38:02 (44694): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-01-29 02:38:02 (44694): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-01-29 02:38:02 (44694): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-01-29 02:38:02 (44694): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-01-29 02:38:02 (44694): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-01-29 02:38:02 (44694): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-01-29 02:38:02 (44694): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-01-29 02:38:02 (44694): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-01-29 02:38:02 (44694): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-01-29 02:38:02 (44694): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-01-29 02:38:02 (44694): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-01-29 02:38:02 (44694): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-01-29 02:38:02 (44694): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-01-29 02:38:02 (44694): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-01-29 02:38:02 (44694): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-01-29 02:38:02 (44694): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-01-29 02:38:02 (44694): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-01-29 02:38:02 (44694): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-01-29 02:38:02 (44694): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-01-29 02:38:02 (44694): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-01-29 02:38:02 (44694): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-01-29 02:38:02 (44694): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-01-29 02:38:02 (44694): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-01-29 02:38:02 (44694): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-01-29 02:38:02 (44694): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-01-29 02:38:02 (44694): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-01-29 02:38:02 (44694): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-01-29 02:38:02 (44694): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-01-29 02:38:08 (44694): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-01-29 02:38:08 (44694): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-01-29 02:38:19 (44694): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-01-29 02:38:19 (44694): Guest Log: 00:00:00.000167 main     Log opened 2026-01-28T15:38:17.532366000Z
2026-01-29 02:38:19 (44694): Guest Log: 00:00:00.000309 main     OS Product: Linux
2026-01-29 02:38:19 (44694): Guest Log: 00:00:00.000374 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-01-29 02:38:19 (44694): Guest Log: 00:00:00.000868 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-01-29 02:38:19 (44694): Guest Log: 00:00:00.000921 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-01-29 02:38:19 (44694): Guest Log: 00:00:00.000923 main     Process ID: 1255
2026-01-29 02:38:19 (44694): Guest Log: 00:00:00.000923 main     Package type: LINUX_64BITS_GENERIC
2026-01-29 02:38:19 (44694): Guest Log: 00:00:00.002707 main     5.2.32 r132073 started. Verbose level = 0
2026-01-29 02:38:19 (44694): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-01-29 02:38:19 (44694): Guest Log: [INFO] Mounting shared directory
2026-01-29 02:38:19 (44694): Guest Log: [INFO] Checking for init_data.xml
2026-01-29 02:38:35 (44694): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-01-29 02:38:35 (44694): Guest Log: [INFO] Detected branch: prod
2026-01-29 02:38:37 (44694): Guest Log: This is the prod version of the ATLAS job wrapper
2026-01-29 02:38:37 (44694): Guest Log: Copying input files
2026-01-29 02:38:46 (44694): Guest Log: Copied input files into RunAtlas.
2026-01-29 02:38:46 (44694): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-01-29 02:38:46 (44694): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-01-29 02:38:46 (44694): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-01-29 02:38:46 (44694): Guest Log: Further information can be found at the LHC@home message board.
2026-01-29 02:38:59 (44694): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-01-29 02:38:59 (44694): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-01-29 02:38:59 (44694): Guest Log: 2.6.3.0 1526 0 30084 155622 4 1 3117739 4096000 0 65024 0 0 n/a 0 0 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-01-29 02:39:00 (44694): Guest Log: copied the webapp to /var/www
2026-01-29 02:39:00 (44694): Guest Log: core_number=1
2026-01-29 02:39:02 (44694): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-01-29 02:39:02 (44694): Guest Log:  *** Starting ATLAS job. (PandaID=6985339191 taskID=48317911) ***
2026-01-29 04:17:56 (44694): Status Report: Elapsed Time: '6000.000000'
2026-01-29 04:17:56 (44694): Status Report: CPU Time: '4992.260000'
2026-01-29 05:57:56 (44694): Status Report: Elapsed Time: '12000.000000'
2026-01-29 05:57:56 (44694): Status Report: CPU Time: '10986.250000'
2026-01-29 07:37:56 (44694): Status Report: Elapsed Time: '18000.000000'
2026-01-29 07:37:56 (44694): Status Report: CPU Time: '16979.520000'
2026-01-29 09:17:57 (44694): Status Report: Elapsed Time: '24000.000000'
2026-01-29 09:17:57 (44694): Status Report: CPU Time: '22972.400000'
2026-01-29 10:57:57 (44694): Status Report: Elapsed Time: '30000.000000'
2026-01-29 10:57:57 (44694): Status Report: CPU Time: '28965.750000'
2026-01-29 12:37:57 (44694): Status Report: Elapsed Time: '36000.000000'
2026-01-29 12:37:57 (44694): Status Report: CPU Time: '34957.690000'
2026-01-29 13:14:54 (44694): Guest Log:  *** Job finished ***
2026-01-29 13:14:54 (44694): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-01-29 13:14:54 (44694): Guest Log: 2026-01-29 02:14:37,878 | INFO     | all workflow threads have been joined
2026-01-29 13:14:54 (44694): Guest Log: 2026-01-29 02:14:37,879 | INFO     | end of generic workflow (traces error code: 0)
2026-01-29 13:14:54 (44694): Guest Log: 2026-01-29 02:14:37,879 | INFO     | traces error code: 0
2026-01-29 13:14:54 (44694): Guest Log: 2026-01-29 02:14:37,879 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-01-29 13:14:54 (44694): Guest Log: 2026-01-29 02:14:46,859 | INFO     | PID=5924 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-01-29 13:14:54 (44694): Guest Log: 2026-01-29 02:14:46,860 | INFO     | found 0 job(s) in 20 queues
2026-01-29 13:14:54 (44694): Guest Log: 2026-01-29 02:14:46,860 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-01-29 13:14:54 (44694): Guest Log: 2026-01-29 02:14:46,860 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-01-29 13:14:54 (44694): Guest Log: 2026-01-29 02:14:46,860 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-01-29 13:14:54 (44694): Guest Log: 2026-01-29 02:14:46,860 | INFO     | [monitor] control thread has ended
2026-01-29 13:14:54 (44694): Guest Log: 2026-01-29 02:14:46,953 [wrapper] ==== pilot stdout END ====
2026-01-29 13:14:54 (44694): Guest Log: 2026-01-29 02:14:46,957 [wrapper] ==== wrapper stdout RESUME ====
2026-01-29 13:14:54 (44694): Guest Log: 2026-01-29 02:14:46,961 [wrapper] pilotpid: 5924
2026-01-29 13:14:54 (44694): Guest Log: 2026-01-29 02:14:46,966 [wrapper] Pilot exit status: 0
2026-01-29 13:14:54 (44694): Guest Log: 2026-01-29 02:14:47,390 [wrapper] pandaids: 6985339191
2026-01-29 13:14:54 (44694): Guest Log: 2026-01-29 02:14:47,412 [wrapper] cleanup supervisor_pilot  2690 5925
2026-01-29 13:14:54 (44694): Guest Log: 2026-01-29 02:14:47,417 [wrapper] Test setup, not cleaning
2026-01-29 13:14:54 (44694): Guest Log: 2026-01-29 02:14:47,421 [wrapper] apfmon messages muted
2026-01-29 13:14:54 (44694): Guest Log: 2026-01-29 02:14:47,426 [wrapper] ==== wrapper stdout END ====
2026-01-29 13:14:54 (44694): Guest Log: 2026-01-29 02:14:47,430 [wrapper] ==== wrapper stderr END ====
2026-01-29 13:14:54 (44694): Guest Log:  *** Error codes and diagnostics ***
2026-01-29 13:14:54 (44694): Guest Log:     "exeErrorCode": 0,
2026-01-29 13:14:54 (44694): Guest Log:     "exeErrorDiag": "",
2026-01-29 13:14:54 (44694): Guest Log:     "pilotErrorCode": 0,
2026-01-29 13:14:54 (44694): Guest Log:     "pilotErrorDiag": "",
2026-01-29 13:14:54 (44694): Guest Log:  *** Listing of results directory ***
2026-01-29 13:14:54 (44694): Guest Log: total 211708
2026-01-29 13:14:54 (44694): Guest Log: -rwx------. 1 atlas atlas     36322 Jan 28 12:21 runpilot2-wrapper.sh
2026-01-29 13:14:54 (44694): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Jan 28 12:23 queuedata.json
2026-01-29 13:14:54 (44694): Guest Log: -rw-r--r--. 1 atlas atlas    584422 Jan 28 12:23 pilot3.tar.gz
2026-01-29 13:14:54 (44694): Guest Log: -rw-r-----. 1 atlas atlas     15845 Jan 28 15:38 start_atlas.sh
2026-01-29 13:14:54 (44694): Guest Log: -rw-r-----. 1 atlas atlas    597761 Jan 28 15:38 input.tar.gz
2026-01-29 13:14:54 (44694): Guest Log: -rw-r--r--. 1 atlas atlas      7501 Jan 28 15:38 init_data.xml
2026-01-29 13:14:54 (44694): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jan 28 15:38 EVNT.48317909._000089.pool.root.1 -> /data/./ATLAS.root_0
2026-01-29 13:14:54 (44694): Guest Log: -rw-r--r--. 1 atlas atlas      2501 Jan 28 15:39 pandaJob.out
2026-01-29 13:14:54 (44694): Guest Log: -rw-------. 1 atlas atlas       410 Jan 28 15:45 workernode_map.json
2026-01-29 13:14:54 (44694): Guest Log: -rw-------. 1 atlas atlas   1005192 Jan 28 15:46 agis_schedconf.cvmfs.json
2026-01-29 13:14:54 (44694): Guest Log: drwx------. 5 atlas atlas      4096 Jan 28 15:46 pilot3
2026-01-29 13:14:54 (44694): Guest Log: -rw-------. 1 atlas atlas 201250555 Jan 29 02:13 HITS.48317911._004455.pool.root.1
2026-01-29 13:14:54 (44694): Guest Log: -rw-------. 1 atlas atlas      1025 Jan 29 02:13 memory_monitor_summary.json
2026-01-29 13:14:54 (44694): Guest Log: -rw-------. 1 atlas atlas   1516246 Jan 29 02:14 agis_ddmendpoints.agis.ALL.json
2026-01-29 13:14:54 (44694): Guest Log: -rw-------. 1 atlas atlas    694394 Jan 29 02:14 log.48317911._004455.job.log.tgz.1
2026-01-29 13:14:54 (44694): Guest Log: -rw-------. 1 atlas atlas      6316 Jan 29 02:14 heartbeat.json
2026-01-29 13:14:54 (44694): Guest Log: -rw-------. 1 atlas atlas        95 Jan 29 02:14 pilot_heartbeat.json
2026-01-29 13:14:54 (44694): Guest Log: -rw-------. 1 atlas atlas       744 Jan 29 02:14 pilotlog.txt
2026-01-29 13:14:54 (44694): Guest Log: -rw-------. 1 atlas atlas   5140841 Jan 29 02:14 log.48317911._004455.job.log.1
2026-01-29 13:14:54 (44694): Guest Log: -rw-------. 1 atlas atlas       357 Jan 29 02:14 output.list
2026-01-29 13:14:54 (44694): Guest Log: -rw-r--r--. 1 atlas atlas      8675 Jan 29 02:14 runtime_log.err
2026-01-29 13:14:54 (44694): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jan 29 02:14 runtime_log
2026-01-29 13:14:54 (44694): Guest Log: -rw-------. 1 atlas atlas   5857280 Jan 29 02:14 result.tar.gz
2026-01-29 13:14:54 (44694): Guest Log: -rw-------. 1 atlas atlas       674 Jan 29 02:14 HEANDmAjJ58nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm9iFKDmGf9oMo.diag
2026-01-29 13:14:54 (44694): Guest Log: Looking for outputfile HITS.48317911._004455.pool.root.1
2026-01-29 13:14:54 (44694): Guest Log: HITS file was successfully produced
2026-01-29 13:14:54 (44694): Guest Log: -rw-------. 1 atlas atlas 201250555 Jan 29 02:13 /home/atlas/RunAtlas/HITS.48317911._004455.pool.root.1
2026-01-29 13:14:54 (44694): Guest Log: Successfully finished the ATLAS job!
2026-01-29 13:14:54 (44694): Guest Log: Copying the results back to the shared directory!
2026-01-29 13:14:55 (44694): Guest Log:  *** Contents of shared directory: ***
2026-01-29 13:14:55 (44694): Guest Log: total 535240
2026-01-29 13:14:55 (44694): Guest Log: -rw-rw----. 1 root root 532907251 Jan 28 15:37 ATLAS.root_0
2026-01-29 13:14:55 (44694): Guest Log: -rw-rw-r--. 1 root root      7501 Jan 28 15:37 init_data.xml
2026-01-29 13:14:55 (44694): Guest Log: -rw-rw----. 1 root root    597761 Jan 28 15:37 input.tar.gz
2026-01-29 13:14:55 (44694): Guest Log: -rw-r--r--. 1 root root   5857280 Jan 29  2026 result.tar.gz
2026-01-29 13:14:55 (44694): Guest Log: -rw-rw----. 1 root root     15845 Jan 28 15:37 start_atlas.sh
2026-01-29 13:14:55 (44694): Guest Log:  *** Success! Shutting down the machine. ***
2026-01-29 13:14:55 (44694): VM Completion File Detected.
2026-01-29 13:14:55 (44694): Powering off VM.
2026-01-29 13:14:56 (44694): Successfully stopped VM.
2026-01-29 13:14:56 (44694): Deregistering VM. (boinc_6ed6d2a3c28e54e0, slot#1)
2026-01-29 13:14:56 (44694): Removing network bandwidth throttle group from VM.
2026-01-29 13:14:56 (44694): Removing VM from VirtualBox.
2026-01-29 13:15:01 (44694): called boinc_finish(0)

</stderr_txt>
]]>

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