Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:30:24 (3539167): wrapper (7.7.26015): starting
23:30:24 (3539167): wrapper: running run_atlas (--nthreads 9)
[2026-01-28 23:30:24] Arguments: --nthreads 9
[2026-01-28 23:30:24] Threads: 9
[2026-01-28 23:30:24] Checking for CVMFS
[2026-01-28 23:30:25] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-28 23:30:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-28 23:30:26] Running cvmfs_config stat atlas.cern.ch
[2026-01-28 23:30:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-28 23:30:27] 2.13.3.0 15733 120293 664660 155626 2 534 27914490 32935937 28460 16776704 0 569417868 99.674 460525678 27476 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-28 23:30:27] CVMFS is ok
[2026-01-28 23:30:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-28 23:30:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-28 23:30:27] Further information can be found at the LHC@home message board.
[2026-01-28 23:30:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-28 23:30:27] Checking for apptainer binary...
[2026-01-28 23:30:27] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-28 23:30:27] Running /usr/bin/apptainer --version
[2026-01-28 23:30:28] apptainer version 1.4.5-2.el9
[2026-01-28 23:30:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-28 23:30:29] c-8-39.aglt2.org
[2026-01-28 23:30:29] apptainer works
[2026-01-28 23:30:29] Set ATHENA_PROC_NUMBER=9
[2026-01-28 23:30:29] Set ATHENA_CORE_NUMBER=9
[2026-01-28 23:30:29] Starting ATLAS job with PandaID=6984628618
[2026-01-28 23:30:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-30 09:11:36]  *** The last 200 lines of the pilot log: ***
[2026-01-30 09:11:36] 2026-01-30 14:10:40,318 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-30 09:11:36] 2026-01-30 14:10:40,318 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-30 09:11:36] 2026-01-30 14:10:40,352 | INFO     | fitting pss+swap vs Time
[2026-01-30 09:11:36] 2026-01-30 14:10:40,355 | INFO     | sum of square deviations: 2421561480925.274
[2026-01-30 09:11:36] 2026-01-30 14:10:40,513 | INFO     | sum of deviations: -532692724825.36475
[2026-01-30 09:11:36] 2026-01-30 14:10:40,513 | INFO     | mean x: 1769721675.7605846
[2026-01-30 09:11:36] 2026-01-30 14:10:40,513 | INFO     | mean y: 2579040.9697580645
[2026-01-30 09:11:36] 2026-01-30 14:10:40,513 | INFO     | intersect: 391880683.347719
[2026-01-30 09:11:36] 2026-01-30 14:10:40,516 | INFO     | chi2: 5.94488742896203
[2026-01-30 09:11:36] 2026-01-30 14:10:40,519 | INFO     | sum of square deviations: 2403300320274.1934
[2026-01-30 09:11:36] 2026-01-30 14:10:40,690 | INFO     | sum of deviations: 129921536645.50159
[2026-01-30 09:11:36] 2026-01-30 14:10:40,690 | INFO     | mean x: 1769721523.2657907
[2026-01-30 09:11:36] 2026-01-30 14:10:40,690 | INFO     | mean y: 2584574.5199595755
[2026-01-30 09:11:36] 2026-01-30 14:10:40,690 | INFO     | intersect: -93085924.00145581
[2026-01-30 09:11:36] 2026-01-30 14:10:40,697 | INFO     | chi2: 2.3242023031912
[2026-01-30 09:11:36] 2026-01-30 14:10:40,697 | INFO     | current chi2=2.3242023031912 (change=60.90418311592819 %)
[2026-01-30 09:11:36] 2026-01-30 14:10:40,704 | INFO     | sum of square deviations: 2385130845714.1245
[2026-01-30 09:11:36] 2026-01-30 14:10:42,781 | INFO     | sum of deviations: 127530007888.75899
[2026-01-30 09:11:36] 2026-01-30 14:10:42,782 | INFO     | mean x: 1769721370.7695036
[2026-01-30 09:11:36] 2026-01-30 14:10:42,782 | INFO     | mean y: 2584554.447821682
[2026-01-30 09:11:36] 2026-01-30 14:10:42,782 | INFO     | intersect: -92040266.98731694
[2026-01-30 09:11:36] 2026-01-30 14:10:42,808 | INFO     | chi2: 2.324143727592392
[2026-01-30 09:11:36] 2026-01-30 14:10:42,808 | INFO     | current chi2=2.324143727592392 (change=0.0025202452784516965 %)
[2026-01-30 09:11:36] 2026-01-30 14:10:42,808 | INFO     | right removable region: 1973
[2026-01-30 09:11:36] 2026-01-30 14:10:42,822 | INFO     | sum of square deviations: 2403297826350.195
[2026-01-30 09:11:36] 2026-01-30 14:10:42,865 | INFO     | monitor loop #4038: job 0:6984628618 is in state 'finished'
[2026-01-30 09:11:36] 2026-01-30 14:10:42,865 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-30 09:11:36] 2026-01-30 14:10:44,670 | INFO     | sum of deviations: -987383498950.3363
[2026-01-30 09:11:36] 2026-01-30 14:10:44,670 | INFO     | mean x: 1769721828.2657907
[2026-01-30 09:11:36] 2026-01-30 14:10:44,670 | INFO     | mean y: 2582835.074785245
[2026-01-30 09:11:36] 2026-01-30 14:10:44,671 | INFO     | intersect: 729664643.9971399
[2026-01-30 09:11:36] 2026-01-30 14:10:44,783 | INFO     | chi2: 3.832125684422274
[2026-01-30 09:11:36] 2026-01-30 14:10:44,783 | INFO     | current chi2=3.832125684422274 (change=35.539137953174695 %)
[2026-01-30 09:11:36] 2026-01-30 14:10:45,022 | INFO     | sum of square deviations: 2385126220012.5015
[2026-01-30 09:11:36] 2026-01-30 14:10:45,576 | INFO     | monitor loop #4039: job 0:6984628618 is in state 'finished'
[2026-01-30 09:11:36] 2026-01-30 14:10:45,577 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-30 09:11:36] 2026-01-30 14:10:46,930 | INFO     | sum of deviations: -1061163034993.3676
[2026-01-30 09:11:36] 2026-01-30 14:10:46,930 | INFO     | mean x: 1769721980.7710233
[2026-01-30 09:11:36] 2026-01-30 14:10:46,930 | INFO     | mean y: 2583454.1474164133
[2026-01-30 09:11:36] 2026-01-30 14:10:46,930 | INFO     | intersect: 789947884.7810329
[2026-01-30 09:11:36] 2026-01-30 14:10:47,087 | INFO     | chi2: 3.781033211364902
[2026-01-30 09:11:36] 2026-01-30 14:10:47,087 | INFO     | current chi2=3.781033211364902 (change=1.333267154181941 %)
[2026-01-30 09:11:36] 2026-01-30 14:10:47,088 | INFO     | left removable region: 20
[2026-01-30 09:11:36] 2026-01-30 14:10:47,111 | INFO     | sum of square deviations: 2309811261711.1226
[2026-01-30 09:11:36] 2026-01-30 14:10:47,666 | INFO     | sum of deviations: -392946583647.02747
[2026-01-30 09:11:36] 2026-01-30 14:10:47,667 | INFO     | mean x: 1769721950.2887864
[2026-01-30 09:11:36] 2026-01-30 14:10:47,667 | INFO     | mean y: 2588938.742959549
[2026-01-30 09:11:36] 2026-01-30 14:10:47,667 | INFO     | intersect: 303655179.9110678
[2026-01-30 09:11:36] 2026-01-30 14:10:47,674 | INFO     | chi2: 0.11388847310468796
[2026-01-30 09:11:36] 2026-01-30 14:10:47,674 | INFO     | current memory leak: -0.17 B/s (using 1953 data points, chi2=0.11)
[2026-01-30 09:11:36] 2026-01-30 14:10:47,676 | INFO     | could have reported an average CPU frequency of 2828 MHz (70 samples)
[2026-01-30 09:11:36] 2026-01-30 14:10:47,676 | INFO     | ..............................
[2026-01-30 09:11:36] 2026-01-30 14:10:47,676 | INFO     | . Timing measurements:
[2026-01-30 09:11:36] 2026-01-30 14:10:47,680 | INFO     | . get job = 0 s
[2026-01-30 09:11:36] 2026-01-30 14:10:47,680 | INFO     | . initial setup = 29 s
[2026-01-30 09:11:36] 2026-01-30 14:10:47,681 | INFO     | . payload setup = 37 s
[2026-01-30 09:11:36] 2026-01-30 14:10:47,681 | INFO     | . stage-in = 0 s
[2026-01-30 09:11:36] 2026-01-30 14:10:47,681 | INFO     | . payload execution = 121045 s
[2026-01-30 09:11:36] 2026-01-30 14:10:47,681 | INFO     | . stage-out = 15 s
[2026-01-30 09:11:36] 2026-01-30 14:10:47,681 | INFO     | . log creation = 4 s
[2026-01-30 09:11:36] 2026-01-30 14:10:47,681 | INFO     | ..............................
[2026-01-30 09:11:36] 2026-01-30 14:10:47,777 | INFO     | PID=3544622 has CPU usage=11.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-30 09:11:36] 2026-01-30 14:10:47,778 | INFO     | .. there are 31 such processes running
[2026-01-30 09:11:36] 2026-01-30 14:10:47,835 | INFO     | 
[2026-01-30 09:11:36] 2026-01-30 14:10:47,835 | INFO     | job summary report
[2026-01-30 09:11:36] 2026-01-30 14:10:47,836 | INFO     | --------------------------------------------------
[2026-01-30 09:11:36] 2026-01-30 14:10:47,836 | INFO     | PanDA job id: 6984628618
[2026-01-30 09:11:36] 2026-01-30 14:10:47,836 | INFO     | task id: 48317971
[2026-01-30 09:11:36] 2026-01-30 14:10:47,836 | INFO     | errors: (none)
[2026-01-30 09:11:36] 2026-01-30 14:10:47,836 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-30 09:11:36] 2026-01-30 14:10:47,836 | INFO     | pilot state: finished 
[2026-01-30 09:11:36] 2026-01-30 14:10:47,836 | INFO     | transexitcode: 0
[2026-01-30 09:11:36] 2026-01-30 14:10:47,836 | INFO     | exeerrorcode: 0
[2026-01-30 09:11:36] 2026-01-30 14:10:47,837 | INFO     | exeerrordiag: 
[2026-01-30 09:11:36] 2026-01-30 14:10:47,837 | INFO     | exitcode: 0
[2026-01-30 09:11:36] 2026-01-30 14:10:47,837 | INFO     | exitmsg: OK
[2026-01-30 09:11:36] 2026-01-30 14:10:47,837 | INFO     | cpuconsumptiontime: 59141 s
[2026-01-30 09:11:36] 2026-01-30 14:10:47,837 | INFO     | nevents: 400
[2026-01-30 09:11:36] 2026-01-30 14:10:47,837 | INFO     | neventsw: 0
[2026-01-30 09:11:36] 2026-01-30 14:10:47,837 | INFO     | pid: 3552828
[2026-01-30 09:11:36] 2026-01-30 14:10:47,837 | INFO     | pgrp: 3552828
[2026-01-30 09:11:36] 2026-01-30 14:10:47,837 | INFO     | corecount: 9
[2026-01-30 09:11:36] 2026-01-30 14:10:47,838 | INFO     | event service: False
[2026-01-30 09:11:36] 2026-01-30 14:10:47,838 | INFO     | sizes: {0: 2283125, 1: 2283810, 2: 2284271, 121090: 2356702, 121092: 2356701, 121108: 2366678, 121111: 2366862, 121119: 2367056}
[2026-01-30 09:11:36] 2026-01-30 14:10:47,838 | INFO     | --------------------------------------------------
[2026-01-30 09:11:36] 2026-01-30 14:10:47,838 | INFO     | 
[2026-01-30 09:11:36] 2026-01-30 14:10:47,838 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-30 09:11:36] 2026-01-30 14:10:47,879 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-30 09:11:36] 2026-01-30 14:10:47,880 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-30 09:11:36] 2026-01-30 14:10:47,880 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-30 09:11:36] 2026-01-30 14:10:47,880 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-30 09:11:36] 2026-01-30 14:10:47,880 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-30 09:11:36] 2026-01-30 14:10:47,880 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-30 09:11:36] 2026-01-30 14:10:47,880 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-30 09:11:36] 2026-01-30 14:10:47,881 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-30 09:11:36] 2026-01-30 14:10:47,881 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-30 09:11:36] 2026-01-30 14:10:47,881 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-30 09:11:36] 2026-01-30 14:10:47,881 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-30 09:11:36] 2026-01-30 14:10:47,881 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-30 09:11:36] 2026-01-30 14:10:47,881 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-30 09:11:36] 2026-01-30 14:10:47,881 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-30 09:11:36] 2026-01-30 14:10:47,881 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-30 09:11:36] 2026-01-30 14:10:47,881 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-30 09:11:36] 2026-01-30 14:10:47,882 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-30 09:11:36] 2026-01-30 14:10:47,882 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-30 09:11:36] 2026-01-30 14:10:47,882 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-30 09:11:36] 2026-01-30 14:10:47,882 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-30 09:11:36] 2026-01-30 14:10:47,928 | INFO     | job 6984628618 has completed (purged errors)
[2026-01-30 09:11:36] 2026-01-30 14:10:47,929 | INFO     | overall cleanup function is called
[2026-01-30 09:11:36] 2026-01-30 14:10:49,061 | INFO     | --- collectZombieJob: --- 10, [3552828]
[2026-01-30 09:11:36] 2026-01-30 14:10:49,061 | INFO     | zombie collector waiting for pid 3552828
[2026-01-30 09:11:36] 2026-01-30 14:10:49,101 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-30 09:11:36] 2026-01-30 14:10:49,102 | INFO     | collected zombie processes
[2026-01-30 09:11:36] 2026-01-30 14:10:49,102 | INFO     | will attempt to kill all subprocesses of pid=3552828
[2026-01-30 09:11:36] 2026-01-30 14:10:51,578 | INFO     | process IDs to be killed: [3552828] (in reverse order)
[2026-01-30 09:11:36] 2026-01-30 14:10:53,372 | WARNING  | found no corresponding commands to process id(s)
[2026-01-30 09:11:36] 2026-01-30 14:10:53,373 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-30 09:11:36] 2026-01-30 14:10:53,751 | INFO     | did not find any defunct processes belonging to 3552828
[2026-01-30 09:11:36] 2026-01-30 14:10:54,137 | INFO     | did not find any defunct processes belonging to 3552828
[2026-01-30 09:11:36] 2026-01-30 14:10:54,191 | INFO     | ready for new job
[2026-01-30 09:11:36] 2026-01-30 14:10:54,192 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-30 09:11:36] 2026-01-30 14:10:54,342 | INFO     | **************************************
[2026-01-30 09:11:36] 2026-01-30 14:10:54,343 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-30 09:11:36] 2026-01-30 14:10:54,343 | INFO     | **************************************
[2026-01-30 09:11:36] 2026-01-30 14:10:54,343 | INFO     | 
[2026-01-30 09:11:36] 2026-01-30 14:10:54,469 | INFO     | architecture information:
[2026-01-30 09:11:36] 2026-01-30 14:10:54,557 | INFO     | executing command: cat /etc/os-release
[2026-01-30 09:11:36] 2026-01-30 14:10:54,987 | INFO     | cat /etc/os-release:
[2026-01-30 09:11:36] NAME="CentOS Linux"
[2026-01-30 09:11:36] VERSION="7 (Core)"
[2026-01-30 09:11:36] ID="centos"
[2026-01-30 09:11:36] ID_LIKE="rhel fedora"
[2026-01-30 09:11:36] VERSION_ID="7"
[2026-01-30 09:11:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-30 09:11:36] ANSI_COLOR="0;31"
[2026-01-30 09:11:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-30 09:11:36] HOME_URL="https://www.centos.org/"
[2026-01-30 09:11:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-30 09:11:36] 
[2026-01-30 09:11:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-30 09:11:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-30 09:11:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-30 09:11:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-30 09:11:36] 
[2026-01-30 09:11:36] 2026-01-30 14:10:54,988 | INFO     | **************************************
[2026-01-30 09:11:36] 2026-01-30 14:10:55,491 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-30 09:11:36] 2026-01-30 14:10:55,567 | INFO     | sufficient remaining disk space (72231157760 B)
[2026-01-30 09:11:36] 2026-01-30 14:10:55,567 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-30 09:11:36] 2026-01-30 14:10:55,567 | INFO     | current server update state: UPDATING_FINAL
[2026-01-30 09:11:36] 2026-01-30 14:10:55,567 | INFO     | update_server=False
[2026-01-30 09:11:36] 2026-01-30 14:10:55,568 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-30 09:11:36] 2026-01-30 14:10:55,831 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-30 09:11:36] 2026-01-30 14:10:55,832 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-30 09:11:36] 2026-01-30 14:10:55,832 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-30 09:11:36] 2026-01-30 14:10:55,832 | INFO     | will abort loop
[2026-01-30 09:11:36] 2026-01-30 14:10:55,843 | INFO     | all job control threads have been joined
[2026-01-30 09:11:36] 2026-01-30 14:10:56,163 | INFO     | all data control threads have been joined
[2026-01-30 09:11:36] 2026-01-30 14:10:56,421 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-30 09:11:36] 2026-01-30 14:10:56,422 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-30 09:11:36] 2026-01-30 14:10:56,573 | INFO     | [job] retrieve thread has finished
[2026-01-30 09:11:36] 2026-01-30 14:10:56,838 | INFO     | [job] job monitor thread has finished
[2026-01-30 09:11:36] 2026-01-30 14:10:56,849 | INFO     | [job] control thread has finished
[2026-01-30 09:11:36] 2026-01-30 14:10:56,926 | INFO     | [payload] validate_pre thread has finished
[2026-01-30 09:11:36] 2026-01-30 14:10:57,028 | INFO     | [job] validate thread has finished
[2026-01-30 09:11:36] 2026-01-30 14:10:57,139 | INFO     | all payload control threads have been joined
[2026-01-30 09:11:36] 2026-01-30 14:10:57,169 | INFO     | [data] control thread has finished
[2026-01-30 09:11:36] 2026-01-30 14:10:57,173 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-30 09:11:36] 2026-01-30 14:10:57,434 | INFO     | [payload] execute_payloads thread has finished
[2026-01-30 09:11:36] 2026-01-30 14:10:57,441 | INFO     | [data] copytool_in thread has finished
[2026-01-30 09:11:36] 2026-01-30 14:10:57,614 | INFO     | [job] create_data_payload thread has finished
[2026-01-30 09:11:36] 2026-01-30 14:10:57,828 | INFO     | [payload] validate_post thread has finished
[2026-01-30 09:11:36] 2026-01-30 14:10:57,892 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-30 09:11:36] 2026-01-30 14:10:58,076 | INFO     | [payload] failed_post thread has finished
[2026-01-30 09:11:36] 2026-01-30 14:10:58,152 | INFO     | [payload] control thread has finished
[2026-01-30 09:11:36] 2026-01-30 14:10:58,179 | INFO     | [job] queue monitor thread has finished
[2026-01-30 09:11:36] 2026-01-30 14:10:58,428 | INFO     | [data] copytool_out thread has finished
[2026-01-30 09:11:36] 2026-01-30 14:11:00,437 | INFO     | [data] queue_monitor thread has finished
[2026-01-30 09:11:36] 2026-01-30 14:11:02,165 | INFO     | [monitor] cgroup control has ended
[2026-01-30 09:11:36] 2026-01-30 14:11:02,358 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140429485926208)>', '<ExcThread(monitor, started 140428846294784)>']
[2026-01-30 09:11:36] 2026-01-30 14:11:07,401 | INFO     | all workflow threads have been joined
[2026-01-30 09:11:36] 2026-01-30 14:11:07,402 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-30 09:11:36] 2026-01-30 14:11:07,402 | INFO     | traces error code: 0
[2026-01-30 09:11:36] 2026-01-30 14:11:07,402 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-30 09:11:36] 2026-01-30 14:11:29,813 | INFO     | PID=3544622 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-30 09:11:36] 2026-01-30 14:11:29,816 | INFO     | .. there are 31 such processes running
[2026-01-30 09:11:36] 2026-01-30 14:11:29,817 | INFO     | found 0 job(s) in 20 queues
[2026-01-30 09:11:36] 2026-01-30 14:11:29,818 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-30 09:11:36] 2026-01-30 14:11:29,818 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-30 09:11:36] 2026-01-30 14:11:29,818 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-30 09:11:36] 2026-01-30 14:11:29,818 | INFO     | [monitor] control thread has ended
[2026-01-30 09:11:36] 2026-01-30 14:11:34,229 [wrapper] ==== pilot stdout END ====
[2026-01-30 09:11:36] 2026-01-30 14:11:34,244 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-30 09:11:36] 2026-01-30 14:11:34,273 [wrapper] pilotpid: 3544622
[2026-01-30 09:11:36] 2026-01-30 14:11:34,331 [wrapper] Pilot exit status: 0
[2026-01-30 09:11:36] 2026-01-30 14:11:34,503 [wrapper] pandaids: 6984628618
[2026-01-30 09:11:36] 2026-01-30 14:11:35,327 [wrapper] cleanup supervisor_pilot 1394208 3544623
[2026-01-30 09:11:36] 2026-01-30 14:11:35,355 [wrapper] Test setup, not cleaning
[2026-01-30 09:11:36] 2026-01-30 14:11:35,390 [wrapper] apfmon messages muted
[2026-01-30 09:11:36] 2026-01-30 14:11:35,428 [wrapper] ==== wrapper stdout END ====
[2026-01-30 09:11:36] 2026-01-30 14:11:35,494 [wrapper] ==== wrapper stderr END ====
[2026-01-30 09:11:36]  *** Error codes and diagnostics ***
[2026-01-30 09:11:36]     "exeErrorCode": 0,
[2026-01-30 09:11:36]     "exeErrorDiag": "",
[2026-01-30 09:11:36]     "pilotErrorCode": 0,
[2026-01-30 09:11:36]     "pilotErrorDiag": "",
[2026-01-30 09:11:36]  *** Listing of results directory ***
[2026-01-30 09:11:36] total 740612
[2026-01-30 09:11:36] -rw-r--r--. 1 boincer umatlas    584422 Jan 28 07:08 pilot3.tar.gz
[2026-01-30 09:11:36] -rwx------. 1 boincer umatlas     36322 Jan 28 07:10 runpilot2-wrapper.sh
[2026-01-30 09:11:36] -rw-r--r--. 1 boincer umatlas      5111 Jan 28 07:11 queuedata.json
[2026-01-30 09:11:36] -rw-r--r--. 1 boincer umatlas       100 Jan 28 23:30 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-30 09:11:36] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 28 23:30 run_atlas
[2026-01-30 09:11:36] -rw-r--r--. 1 boincer umatlas       105 Jan 28 23:30 job.xml
[2026-01-30 09:11:36] -rw-r--r--. 2 boincer umatlas 536257214 Jan 28 23:30 EVNT.48317969._000049.pool.root.1
[2026-01-30 09:11:36] -rw-r--r--. 2 boincer umatlas     15845 Jan 28 23:30 start_atlas.sh
[2026-01-30 09:11:36] drwxrwx--x. 2 boincer umatlas      4096 Jan 28 23:30 shared
[2026-01-30 09:11:36] -rw-r--r--. 2 boincer umatlas    597757 Jan 28 23:30 input.tar.gz
[2026-01-30 09:11:36] -rw-r--r--. 1 boincer umatlas         0 Jan 28 23:30 boinc_lockfile
[2026-01-30 09:11:36] -rw-r--r--. 1 boincer umatlas      2509 Jan 28 23:30 pandaJob.out
[2026-01-30 09:11:36] -rw-------. 1 boincer umatlas        57 Jan 28 23:30 setup.sh.local
[2026-01-30 09:11:36] -rw-------. 1 boincer umatlas   1005755 Jan 28 23:31 agis_schedconf.cvmfs.json
[2026-01-30 09:11:36] -rw-------. 1 boincer umatlas       440 Jan 28 23:32 workernode_map.json
[2026-01-30 09:11:36] drwx------. 5 boincer umatlas      4096 Jan 28 23:32 pilot3
[2026-01-30 09:11:36] -rw-r--r--. 1 boincer umatlas      6613 Jan 30 09:03 init_data.xml
[2026-01-30 09:11:36] -rw-------. 1 boincer umatlas 194803026 Jan 30 09:04 HITS.48317971._001514.pool.root.1
[2026-01-30 09:11:36] -rw-r--r--. 1 boincer umatlas       531 Jan 30 09:04 boinc_task_state.xml
[2026-01-30 09:11:36] -rw-------. 1 boincer umatlas      1060 Jan 30 09:10 memory_monitor_summary.json
[2026-01-30 09:11:36] -rw-------. 1 boincer umatlas   1511668 Jan 30 09:10 agis_ddmendpoints.agis.ALL.json
[2026-01-30 09:11:36] -rw-------. 1 boincer umatlas   1424534 Jan 30 09:10 log.48317971._001514.job.log.tgz.1
[2026-01-30 09:11:36] -rw-------. 1 boincer umatlas      6394 Jan 30 09:10 heartbeat.json
[2026-01-30 09:11:36] -rw-------. 1 boincer umatlas       823 Jan 30 09:11 pilotlog.txt
[2026-01-30 09:11:36] -rw-------. 1 boincer umatlas        95 Jan 30 09:11 pilot_heartbeat.json
[2026-01-30 09:11:36] -rw-------. 1 boincer umatlas  10268290 Jan 30 09:11 log.48317971._001514.job.log.1
[2026-01-30 09:11:36] -rw-------. 1 boincer umatlas       357 Jan 30 09:11 output.list
[2026-01-30 09:11:36] -rw-r--r--. 1 boincer umatlas      8192 Jan 30 09:11 boinc_mmap_file
[2026-01-30 09:11:36] -rw-r--r--. 1 boincer umatlas       620 Jan 30 09:11 runtime_log
[2026-01-30 09:11:36] -rw-------. 1 boincer umatlas  11714560 Jan 30 09:11 result.tar.gz
[2026-01-30 09:11:36] -rw-r--r--. 1 boincer umatlas      9333 Jan 30 09:11 runtime_log.err
[2026-01-30 09:11:36] -rw-------. 1 boincer umatlas       658 Jan 30 09:11 IALODmTYJ58nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm4WFKDmlT6F8n.diag
[2026-01-30 09:11:36] -rw-r--r--. 1 boincer umatlas        28 Jan 30 09:11 wrapper_checkpoint.txt
[2026-01-30 09:11:36] -rw-r--r--. 1 boincer umatlas     21313 Jan 30 09:11 stderr.txt
[2026-01-30 09:11:36] HITS file was successfully produced:
[2026-01-30 09:11:36] -rw-------. 1 boincer umatlas 194803026 Jan 30 09:04 shared/HITS.pool.root.1
[2026-01-30 09:11:36]  *** Contents of shared directory: ***
[2026-01-30 09:11:36] total 725980
[2026-01-30 09:11:36] -rw-r--r--. 2 boincer umatlas 536257214 Jan 28 23:30 ATLAS.root_0
[2026-01-30 09:11:36] -rw-r--r--. 2 boincer umatlas     15845 Jan 28 23:30 start_atlas.sh
[2026-01-30 09:11:36] -rw-r--r--. 2 boincer umatlas    597757 Jan 28 23:30 input.tar.gz
[2026-01-30 09:11:36] -rw-------. 1 boincer umatlas 194803026 Jan 30 09:04 HITS.pool.root.1
[2026-01-30 09:11:36] -rw-------. 1 boincer umatlas  11714560 Jan 30 09:11 result.tar.gz
09:11:58 (3539167): run_atlas exited; CPU time 64289.615885
09:11:58 (3539167): called boinc_finish(0)

</stderr_txt>
]]>

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