Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:24:34 (5947): wrapper (7.7.26015): starting
13:24:34 (5947): wrapper: running run_atlas (--nthreads 8)
[2026-01-28 13:24:34] Arguments: --nthreads 8
[2026-01-28 13:24:34] Threads: 8
[2026-01-28 13:24:34] Checking for CVMFS
[2026-01-28 13:24:35] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-28 13:24:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-28 13:24:36] Running cvmfs_config stat atlas.cern.ch
[2026-01-28 13:24:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-28 13:24:37] 2.11.2.0 27430 62773 135064 155622 1 13 16521359 25165825 899 130560 0 21308471 99.840 14786273 3724 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-28 13:24:37] CVMFS is ok
[2026-01-28 13:24:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-28 13:24:38] Checking for apptainer binary...
[2026-01-28 13:24:38] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-28 13:24:38] Running /usr/bin/apptainer --version
[2026-01-28 13:24:38] apptainer version 1.3.2-1.el7
[2026-01-28 13:24:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-28 13:25:43] cg-vwn400.simple-grid.lan
[2026-01-28 13:25:43] apptainer works
[2026-01-28 13:25:44] Set ATHENA_PROC_NUMBER=8
[2026-01-28 13:25:44] Set ATHENA_CORE_NUMBER=8
[2026-01-28 13:25:44] Starting ATLAS job with PandaID=6984627680
[2026-01-28 13:25:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/19 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-28 18:10:06]  *** The last 200 lines of the pilot log: ***
[2026-01-28 18:10:06] 2026-01-28 17:09:18,407 | INFO     | job 6984627680 has finished - writing final server update
[2026-01-28 18:10:06] 2026-01-28 17:09:18,407 | INFO     | total number of processed events: 400 (read)
[2026-01-28 18:10:06] 2026-01-28 17:09:18,413 | INFO     | using path: /var/lib/boinc/slots/19/PanDA_Pilot-6984627680/memory_monitor_summary.json (trf name=prmon)
[2026-01-28 18:10:06] 2026-01-28 17:09:18,413 | INFO     | extracted standard info from prmon json
[2026-01-28 18:10:06] 2026-01-28 17:09:18,414 | INFO     | extracted standard memory fields from prmon json
[2026-01-28 18:10:06] 2026-01-28 17:09:18,414 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-28 18:10:06] 2026-01-28 17:09:18,414 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-28 18:10:06] 2026-01-28 17:09:18,414 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-28 18:10:06] 2026-01-28 17:09:18,423 | INFO     | fitting pss+swap vs Time
[2026-01-28 18:10:06] 2026-01-28 17:09:18,424 | INFO     | sum of square deviations: 5968658887.0
[2026-01-28 18:10:06] 2026-01-28 17:09:18,426 | INFO     | sum of deviations: 164182962993.50006
[2026-01-28 18:10:06] 2026-01-28 17:09:18,426 | INFO     | mean x: 1769611972.5
[2026-01-28 18:10:06] 2026-01-28 17:09:18,430 | INFO     | mean y: 2717476.8395522386
[2026-01-28 18:10:06] 2026-01-28 17:09:18,430 | INFO     | intersect: -48674907177.943665
[2026-01-28 18:10:06] 2026-01-28 17:09:18,430 | INFO     | chi2: 7.134869710842183
[2026-01-28 18:10:06] 2026-01-28 17:09:18,431 | INFO     | sum of square deviations: 5640782972.0
[2026-01-28 18:10:06] 2026-01-28 17:09:18,433 | INFO     | sum of deviations: 180273809960.00003
[2026-01-28 18:10:06] 2026-01-28 17:09:18,434 | INFO     | mean x: 1769611820.0
[2026-01-28 18:10:06] 2026-01-28 17:09:18,434 | INFO     | mean y: 2724824.2737642587
[2026-01-28 18:10:06] 2026-01-28 17:09:18,434 | INFO     | intersect: -56552307788.25373
[2026-01-28 18:10:06] 2026-01-28 17:09:18,434 | INFO     | chi2: 6.443618105244951
[2026-01-28 18:10:06] 2026-01-28 17:09:18,444 | INFO     | current chi2=6.443618105244951 (change=9.688356390682259 %)
[2026-01-28 18:10:06] 2026-01-28 17:09:18,444 | INFO     | right removable region: 262
[2026-01-28 18:10:06] 2026-01-28 17:09:18,445 | INFO     | sum of square deviations: 5640782972.0
[2026-01-28 18:10:06] 2026-01-28 17:09:18,447 | INFO     | sum of deviations: 60878863028.000015
[2026-01-28 18:10:06] 2026-01-28 17:09:18,447 | INFO     | mean x: 1769612125.0
[2026-01-28 18:10:06] 2026-01-28 17:09:18,447 | INFO     | mean y: 2765489.8288973384
[2026-01-28 18:10:06] 2026-01-28 17:09:18,447 | INFO     | intersect: -19095996987.88535
[2026-01-28 18:10:06] 2026-01-28 17:09:18,448 | INFO     | chi2: 2.388054149856155
[2026-01-28 18:10:06] 2026-01-28 17:09:18,448 | INFO     | current chi2=2.388054149856155 (change=66.5298141852926 %)
[2026-01-28 18:10:06] 2026-01-28 17:09:18,449 | INFO     | sum of square deviations: 5325139844.5
[2026-01-28 18:10:06] 2026-01-28 17:09:18,451 | INFO     | sum of deviations: 3609868614.0
[2026-01-28 18:10:06] 2026-01-28 17:09:18,451 | INFO     | mean x: 1769612277.5
[2026-01-28 18:10:06] 2026-01-28 17:09:18,452 | INFO     | mean y: 2793039.496124031
[2026-01-28 18:10:06] 2026-01-28 17:09:18,452 | INFO     | intersect: -1196812605.8080344
[2026-01-28 18:10:06] 2026-01-28 17:09:18,452 | INFO     | chi2: 0.8136140712486052
[2026-01-28 18:10:06] 2026-01-28 17:09:18,452 | INFO     | current chi2=0.8136140712486052 (change=65.92983156191775 %)
[2026-01-28 18:10:06] 2026-01-28 17:09:18,453 | INFO     | sum of square deviations: 5021496942.0
[2026-01-28 18:10:06] 2026-01-28 17:09:18,455 | INFO     | sum of deviations: -7277416022.0
[2026-01-28 18:10:06] 2026-01-28 17:09:18,455 | INFO     | mean x: 1769612430.0
[2026-01-28 18:10:06] 2026-01-28 17:09:18,456 | INFO     | mean y: 2798477.4505928853
[2026-01-28 18:10:06] 2026-01-28 17:09:18,456 | INFO     | intersect: 2567413372.084607
[2026-01-28 18:10:06] 2026-01-28 17:09:18,456 | INFO     | chi2: 0.7536998768399186
[2026-01-28 18:10:06] 2026-01-28 17:09:18,456 | INFO     | current chi2=0.7536998768399186 (change=7.3639574985152185 %)
[2026-01-28 18:10:06] 2026-01-28 17:09:18,456 | INFO     | left removable region: 30
[2026-01-28 18:10:06] 2026-01-28 17:09:18,457 | INFO     | sum of square deviations: 3871990738.0
[2026-01-28 18:10:06] 2026-01-28 17:09:18,459 | INFO     | sum of deviations: 5386778331.5
[2026-01-28 18:10:06] 2026-01-28 17:09:18,459 | INFO     | mean x: 1769612704.5
[2026-01-28 18:10:06] 2026-01-28 17:09:18,459 | INFO     | mean y: 2811040.4612068967
[2026-01-28 18:10:06] 2026-01-28 17:09:18,459 | INFO     | intersect: -2459103777.2047935
[2026-01-28 18:10:06] 2026-01-28 17:09:18,468 | INFO     | chi2: 0.000607377255911938
[2026-01-28 18:10:06] 2026-01-28 17:09:18,468 | INFO     | current memory leak: 1.39 B/s (using 232 data points, chi2=0.00)
[2026-01-28 18:10:06] 2026-01-28 17:09:18,469 | INFO     | could have reported an average CPU frequency of 1999 MHz (13 samples)
[2026-01-28 18:10:06] 2026-01-28 17:09:18,469 | INFO     | ..............................
[2026-01-28 18:10:06] 2026-01-28 17:09:18,470 | INFO     | . Timing measurements:
[2026-01-28 18:10:06] 2026-01-28 17:09:18,470 | INFO     | . get job = 0 s
[2026-01-28 18:10:06] 2026-01-28 17:09:18,470 | INFO     | . initial setup = 125 s
[2026-01-28 18:10:06] 2026-01-28 17:09:18,470 | INFO     | . payload setup = 153 s
[2026-01-28 18:10:06] 2026-01-28 17:09:18,470 | INFO     | . stage-in = 0 s
[2026-01-28 18:10:06] 2026-01-28 17:09:18,470 | INFO     | . payload execution = 16444 s
[2026-01-28 18:10:06] 2026-01-28 17:09:18,470 | INFO     | . stage-out = 3 s
[2026-01-28 18:10:06] 2026-01-28 17:09:18,470 | INFO     | . log creation = 1 s
[2026-01-28 18:10:06] 2026-01-28 17:09:18,471 | INFO     | ..............................
[2026-01-28 18:10:06] 2026-01-28 17:09:18,644 | INFO     | 
[2026-01-28 18:10:06] 2026-01-28 17:09:18,644 | INFO     | job summary report
[2026-01-28 18:10:06] 2026-01-28 17:09:18,644 | INFO     | --------------------------------------------------
[2026-01-28 18:10:06] 2026-01-28 17:09:18,644 | INFO     | PanDA job id: 6984627680
[2026-01-28 18:10:06] 2026-01-28 17:09:18,644 | INFO     | task id: 48317971
[2026-01-28 18:10:06] 2026-01-28 17:09:18,644 | INFO     | errors: (none)
[2026-01-28 18:10:06] 2026-01-28 17:09:18,645 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-28 18:10:06] 2026-01-28 17:09:18,645 | INFO     | pilot state: finished 
[2026-01-28 18:10:06] 2026-01-28 17:09:18,645 | INFO     | transexitcode: 0
[2026-01-28 18:10:06] 2026-01-28 17:09:18,645 | INFO     | exeerrorcode: 0
[2026-01-28 18:10:06] 2026-01-28 17:09:18,645 | INFO     | exeerrordiag: 
[2026-01-28 18:10:06] 2026-01-28 17:09:18,645 | INFO     | exitcode: 0
[2026-01-28 18:10:06] 2026-01-28 17:09:18,645 | INFO     | exitmsg: OK
[2026-01-28 18:10:06] 2026-01-28 17:09:18,645 | INFO     | cpuconsumptiontime: 62734 s
[2026-01-28 18:10:06] 2026-01-28 17:09:18,645 | INFO     | nevents: 400
[2026-01-28 18:10:06] 2026-01-28 17:09:18,646 | INFO     | neventsw: 0
[2026-01-28 18:10:06] 2026-01-28 17:09:18,646 | INFO     | pid: 14345
[2026-01-28 18:10:06] 2026-01-28 17:09:18,646 | INFO     | pgrp: 14345
[2026-01-28 18:10:06] 2026-01-28 17:09:18,646 | INFO     | corecount: 8
[2026-01-28 18:10:06] 2026-01-28 17:09:18,646 | INFO     | event service: False
[2026-01-28 18:10:06] 2026-01-28 17:09:18,646 | INFO     | sizes: {0: 2283131, 1: 2283817, 2: 2284278, 16602: 2315814, 16606: 2324814, 16608: 2325154, 16609: 2325476}
[2026-01-28 18:10:06] 2026-01-28 17:09:18,646 | INFO     | --------------------------------------------------
[2026-01-28 18:10:06] 2026-01-28 17:09:18,646 | INFO     | 
[2026-01-28 18:10:06] 2026-01-28 17:09:18,646 | INFO     | executing command: ls -lF /var/lib/boinc/slots/19
[2026-01-28 18:10:06] 2026-01-28 17:09:18,746 | INFO     | time since job start (16611s) is within the limit (349056.0s)
[2026-01-28 18:10:06] 2026-01-28 17:09:18,887 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-28 18:10:06] 2026-01-28 17:09:18,887 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-28 18:10:06] 2026-01-28 17:09:18,887 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-28 18:10:06] 2026-01-28 17:09:18,888 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-28 18:10:06] 2026-01-28 17:09:18,888 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-28 18:10:06] 2026-01-28 17:09:18,888 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-28 18:10:06] 2026-01-28 17:09:18,888 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-28 18:10:06] 2026-01-28 17:09:18,888 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-28 18:10:06] 2026-01-28 17:09:18,888 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-28 18:10:06] 2026-01-28 17:09:18,888 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-28 18:10:06] 2026-01-28 17:09:18,888 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-28 18:10:06] 2026-01-28 17:09:18,889 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-28 18:10:06] 2026-01-28 17:09:18,889 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-28 18:10:06] 2026-01-28 17:09:18,889 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-28 18:10:06] 2026-01-28 17:09:18,889 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-28 18:10:06] 2026-01-28 17:09:18,889 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-28 18:10:06] 2026-01-28 17:09:18,889 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-28 18:10:06] 2026-01-28 17:09:18,889 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-28 18:10:06] 2026-01-28 17:09:18,889 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-28 18:10:06] 2026-01-28 17:09:18,889 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-28 18:10:06] 2026-01-28 17:09:18,890 | INFO     | job 6984627680 has completed (purged errors)
[2026-01-28 18:10:06] 2026-01-28 17:09:18,890 | INFO     | overall cleanup function is called
[2026-01-28 18:10:06] 2026-01-28 17:09:19,899 | INFO     | --- collectZombieJob: --- 10, [14345]
[2026-01-28 18:10:06] 2026-01-28 17:09:19,899 | INFO     | zombie collector waiting for pid 14345
[2026-01-28 18:10:06] 2026-01-28 17:09:19,899 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-28 18:10:06] 2026-01-28 17:09:19,899 | INFO     | collected zombie processes
[2026-01-28 18:10:06] 2026-01-28 17:09:19,899 | INFO     | will attempt to kill all subprocesses of pid=14345
[2026-01-28 18:10:06] 2026-01-28 17:09:19,982 | INFO     | process IDs to be killed: [14345] (in reverse order)
[2026-01-28 18:10:06] 2026-01-28 17:09:20,462 | WARNING  | found no corresponding commands to process id(s)
[2026-01-28 18:10:06] 2026-01-28 17:09:20,463 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-28 18:10:06] 2026-01-28 17:09:20,465 | INFO     | did not find any defunct processes belonging to 14345
[2026-01-28 18:10:06] 2026-01-28 17:09:20,466 | INFO     | did not find any defunct processes belonging to 14345
[2026-01-28 18:10:06] 2026-01-28 17:09:20,467 | INFO     | ready for new job
[2026-01-28 18:10:06] 2026-01-28 17:09:20,467 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-28 18:10:06] 2026-01-28 17:09:20,469 | INFO     | **************************************
[2026-01-28 18:10:06] 2026-01-28 17:09:20,469 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-28 18:10:06] 2026-01-28 17:09:20,469 | INFO     | **************************************
[2026-01-28 18:10:06] 2026-01-28 17:09:20,470 | INFO     | 
[2026-01-28 18:10:06] 2026-01-28 17:09:20,470 | INFO     | pilot is running in a VM
[2026-01-28 18:10:06] 2026-01-28 17:09:20,470 | INFO     | architecture information:
[2026-01-28 18:10:06] 2026-01-28 17:09:20,473 | INFO     | executing command: cat /etc/os-release
[2026-01-28 18:10:06] 2026-01-28 17:09:20,728 | INFO     | cat /etc/os-release:
[2026-01-28 18:10:06] NAME="CentOS Linux"
[2026-01-28 18:10:06] VERSION="7 (Core)"
[2026-01-28 18:10:06] ID="centos"
[2026-01-28 18:10:06] ID_LIKE="rhel fedora"
[2026-01-28 18:10:06] VERSION_ID="7"
[2026-01-28 18:10:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-28 18:10:06] ANSI_COLOR="0;31"
[2026-01-28 18:10:06] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-28 18:10:06] HOME_URL="https://www.centos.org/"
[2026-01-28 18:10:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-28 18:10:06] 
[2026-01-28 18:10:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-28 18:10:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-28 18:10:06] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-28 18:10:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-28 18:10:06] 
[2026-01-28 18:10:06] 2026-01-28 17:09:20,728 | INFO     | **************************************
[2026-01-28 18:10:06] 2026-01-28 17:09:21,232 | INFO     | executing command: df -mP /var/lib/boinc/slots/19
[2026-01-28 18:10:06] 2026-01-28 17:09:21,517 | INFO     | sufficient remaining disk space (494307115008 B)
[2026-01-28 18:10:06] 2026-01-28 17:09:21,518 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-28 18:10:06] 2026-01-28 17:09:21,518 | INFO     | current server update state: UPDATING_FINAL
[2026-01-28 18:10:06] 2026-01-28 17:09:21,518 | INFO     | update_server=False
[2026-01-28 18:10:06] 2026-01-28 17:09:21,518 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-28 18:10:06] 2026-01-28 17:09:21,519 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-28 18:10:06] 2026-01-28 17:09:21,655 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-28 18:10:06] 2026-01-28 17:09:21,655 | INFO     | aborting loop
[2026-01-28 18:10:06] 2026-01-28 17:09:21,849 | INFO     | all job control threads have been joined
[2026-01-28 18:10:06] 2026-01-28 17:09:21,880 | INFO     | all data control threads have been joined
[2026-01-28 18:10:06] 2026-01-28 17:09:22,144 | INFO     | all payload control threads have been joined
[2026-01-28 18:10:06] 2026-01-28 17:09:22,524 | INFO     | [job] retrieve thread has finished
[2026-01-28 18:10:06] 2026-01-28 17:09:22,661 | INFO     | [job] job monitor thread has finished
[2026-01-28 18:10:06] 2026-01-28 17:09:22,671 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-28 18:10:06] 2026-01-28 17:09:22,813 | INFO     | [payload] failed_post thread has finished
[2026-01-28 18:10:06] 2026-01-28 17:09:22,855 | INFO     | [job] control thread has finished
[2026-01-28 18:10:06] 2026-01-28 17:09:22,873 | INFO     | [payload] validate_pre thread has finished
[2026-01-28 18:10:06] 2026-01-28 17:09:22,887 | INFO     | [data] control thread has finished
[2026-01-28 18:10:06] 2026-01-28 17:09:23,030 | INFO     | [payload] execute_payloads thread has finished
[2026-01-28 18:10:06] 2026-01-28 17:09:23,110 | INFO     | [job] create_data_payload thread has finished
[2026-01-28 18:10:06] 2026-01-28 17:09:23,150 | INFO     | [payload] control thread has finished
[2026-01-28 18:10:06] 2026-01-28 17:09:23,184 | INFO     | [data] copytool_in thread has finished
[2026-01-28 18:10:06] 2026-01-28 17:09:23,223 | INFO     | [job] validate thread has finished
[2026-01-28 18:10:06] 2026-01-28 17:09:23,526 | INFO     | [data] copytool_out thread has finished
[2026-01-28 18:10:06] 2026-01-28 17:09:23,632 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-28 18:10:06] 2026-01-28 17:09:23,849 | INFO     | [payload] validate_post thread has finished
[2026-01-28 18:10:06] 2026-01-28 17:09:24,423 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-28 18:10:06] 2026-01-28 17:09:24,638 | INFO     | [job] queue monitor thread has finished
[2026-01-28 18:10:06] 2026-01-28 17:09:28,432 | INFO     | [data] queue_monitor thread has finished
[2026-01-28 18:10:06] 2026-01-28 17:09:51,859 | INFO     | PID=9921 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-28 18:10:06] 2026-01-28 17:09:51,859 | INFO     | .. there are 2 such processes running
[2026-01-28 18:10:06] 2026-01-28 17:09:51,859 | INFO     | found 0 job(s) in 20 queues
[2026-01-28 18:10:06] 2026-01-28 17:09:51,860 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-28 18:10:06] 2026-01-28 17:09:51,860 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-28 18:10:06] 2026-01-28 17:09:55,439 | INFO     | [monitor] cgroup control has ended
[2026-01-28 18:10:06] 2026-01-28 17:09:56,446 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139635813115712)>', '<ExcThread(monitor, started 139635082651392)>']
[2026-01-28 18:10:06] 2026-01-28 17:09:56,890 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-28 18:10:06] 2026-01-28 17:09:56,890 | INFO     | [monitor] control thread has ended
[2026-01-28 18:10:06] 2026-01-28 17:10:01,472 | INFO     | all workflow threads have been joined
[2026-01-28 18:10:06] 2026-01-28 17:10:01,472 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-28 18:10:06] 2026-01-28 17:10:01,472 | INFO     | traces error code: 0
[2026-01-28 18:10:06] 2026-01-28 17:10:01,472 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-28 18:10:06] 2026-01-28 17:10:01,629 [wrapper] ==== pilot stdout END ====
[2026-01-28 18:10:06] 2026-01-28 17:10:01,791 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-28 18:10:06] 2026-01-28 17:10:01,879 [wrapper] pilotpid: 9921
[2026-01-28 18:10:06] 2026-01-28 17:10:02,001 [wrapper] Pilot exit status: 0
[2026-01-28 18:10:06] 2026-01-28 17:10:02,513 [wrapper] pandaids: 6984627680
[2026-01-28 18:10:06] 2026-01-28 17:10:03,779 [wrapper] cleanup supervisor_pilot 20338 9922
[2026-01-28 18:10:06] 2026-01-28 17:10:03,880 [wrapper] Test setup, not cleaning
[2026-01-28 18:10:06] 2026-01-28 17:10:03,954 [wrapper] apfmon messages muted
[2026-01-28 18:10:06] 2026-01-28 17:10:04,059 [wrapper] ==== wrapper stdout END ====
[2026-01-28 18:10:06] 2026-01-28 17:10:04,120 [wrapper] ==== wrapper stderr END ====
[2026-01-28 18:10:06]  *** Error codes and diagnostics ***
[2026-01-28 18:10:06]     "exeErrorCode": 0,
[2026-01-28 18:10:06]     "exeErrorDiag": "",
[2026-01-28 18:10:06]     "pilotErrorCode": 0,
[2026-01-28 18:10:06]     "pilotErrorDiag": "",
[2026-01-28 18:10:06]  *** Listing of results directory ***
[2026-01-28 18:10:06] total 734628
[2026-01-28 18:10:06] -rw-r--r--. 1 boinc boinc    584422 Jan 28 13:08 pilot3.tar.gz
[2026-01-28 18:10:06] -rwx------. 1 boinc boinc     36322 Jan 28 13:10 runpilot2-wrapper.sh
[2026-01-28 18:10:06] -rw-r--r--. 1 boinc boinc      5111 Jan 28 13:11 queuedata.json
[2026-01-28 18:10:06] -rw-r--r--. 1 boinc boinc       100 Jan 28 13:24 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-28 18:10:06] -rwxr-xr-x. 1 boinc boinc      7986 Jan 28 13:24 run_atlas
[2026-01-28 18:10:06] -rw-r--r--. 1 boinc boinc       105 Jan 28 13:24 job.xml
[2026-01-28 18:10:06] -rw-r--r--. 1 boinc boinc      6392 Jan 28 13:24 init_data.xml
[2026-01-28 18:10:06] -rw-r--r--. 2 boinc boinc 539202041 Jan 28 13:24 EVNT.48317969._000045.pool.root.1
[2026-01-28 18:10:06] -rw-r--r--. 2 boinc boinc     15845 Jan 28 13:24 start_atlas.sh
[2026-01-28 18:10:06] drwxrwx--x. 2 boinc boinc        68 Jan 28 13:24 shared
[2026-01-28 18:10:06] -rw-r--r--. 2 boinc boinc    597766 Jan 28 13:24 input.tar.gz
[2026-01-28 18:10:06] -rw-r--r--. 1 boinc boinc         0 Jan 28 13:24 boinc_lockfile
[2026-01-28 18:10:06] -rw-r--r--. 1 boinc boinc      2512 Jan 28 13:25 pandaJob.out
[2026-01-28 18:10:06] -rw-------. 1 boinc boinc       415 Jan 28 13:32 workernode_map.json
[2026-01-28 18:10:06] -rw-------. 1 boinc boinc   1005192 Jan 28 13:32 agis_schedconf.cvmfs.json
[2026-01-28 18:10:06] drwx------. 5 boinc boinc      4096 Jan 28 13:32 pilot3
[2026-01-28 18:10:06] -rw-------. 1 boinc boinc 203445077 Jan 28 18:07 HITS.48317971._001329.pool.root.1
[2026-01-28 18:10:06] -rw-r--r--. 1 boinc boinc       532 Jan 28 18:08 boinc_task_state.xml
[2026-01-28 18:10:06] -rw-------. 1 boinc boinc      1007 Jan 28 18:09 memory_monitor_summary.json
[2026-01-28 18:10:06] -rw-------. 1 boinc boinc        95 Jan 28 18:09 pilot_heartbeat.json
[2026-01-28 18:10:06] -rw-------. 1 boinc boinc   1516246 Jan 28 18:09 agis_ddmendpoints.agis.ALL.json
[2026-01-28 18:10:06] -rw-------. 1 boinc boinc    497489 Jan 28 18:09 log.48317971._001329.job.log.tgz.1
[2026-01-28 18:10:06] -rw-------. 1 boinc boinc      6309 Jan 28 18:09 heartbeat.json
[2026-01-28 18:10:06] -rw-r--r--. 1 boinc boinc      8192 Jan 28 18:09 boinc_mmap_file
[2026-01-28 18:10:06] -rw-r--r--. 1 boinc boinc        28 Jan 28 18:09 wrapper_checkpoint.txt
[2026-01-28 18:10:06] -rw-------. 1 boinc boinc      4880 Jan 28 18:10 pilotlog.txt
[2026-01-28 18:10:06] -rw-------. 1 boinc boinc   2343339 Jan 28 18:10 log.48317971._001329.job.log.1
[2026-01-28 18:10:06] -rw-------. 1 boinc boinc       357 Jan 28 18:10 output.list
[2026-01-28 18:10:06] -rw-r--r--. 1 boinc boinc       620 Jan 28 18:10 runtime_log
[2026-01-28 18:10:06] -rw-------. 1 boinc boinc   2856960 Jan 28 18:10 result.tar.gz
[2026-01-28 18:10:06] -rw-------. 1 boinc boinc       655 Jan 28 18:10 vfYMDmKYJ58n9Rq4apOajLDm4fhM0noT9bVooX4SDmfUFKDmO2S0Qn.diag
[2026-01-28 18:10:06] -rw-r--r--. 1 boinc boinc      8832 Jan 28 18:10 runtime_log.err
[2026-01-28 18:10:06] -rw-r--r--. 1 boinc boinc     20712 Jan 28 18:10 stderr.txt
[2026-01-28 18:10:06] HITS file was successfully produced:
[2026-01-28 18:10:06] -rw-------. 1 boinc boinc 203445077 Jan 28 18:07 shared/HITS.pool.root.1
[2026-01-28 18:10:06]  *** Contents of shared directory: ***
[2026-01-28 18:10:06] total 728640
[2026-01-28 18:10:06] -rw-r--r--. 2 boinc boinc 539202041 Jan 28 13:24 ATLAS.root_0
[2026-01-28 18:10:06] -rw-r--r--. 2 boinc boinc     15845 Jan 28 13:24 start_atlas.sh
[2026-01-28 18:10:06] -rw-r--r--. 2 boinc boinc    597766 Jan 28 13:24 input.tar.gz
[2026-01-28 18:10:06] -rw-------. 1 boinc boinc 203445077 Jan 28 18:07 HITS.pool.root.1
[2026-01-28 18:10:06] -rw-------. 1 boinc boinc   2856960 Jan 28 18:10 result.tar.gz
18:10:08 (5947): run_atlas exited; CPU time 62907.299816
18:10:08 (5947): called boinc_finish(0)

</stderr_txt>
]]>

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