Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:12:25 (3457797): wrapper (7.7.26015): starting
07:12:25 (3457797): wrapper: running run_atlas (--nthreads 8)
[2026-01-28 07:12:25] Arguments: --nthreads 8
[2026-01-28 07:12:25] Threads: 8
[2026-01-28 07:12:25] Checking for CVMFS
[2026-01-28 07:12:26] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-28 07:12:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-28 07:12:26] Running cvmfs_config stat atlas.cern.ch
[2026-01-28 07:12:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-28 07:12:28] 2.13.3.0 73771 44224 322624 155622 2 454 23035288 40960000 16552 16776704 0 44938502 99.626 46540559 36879 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-28 07:12:28] CVMFS is ok
[2026-01-28 07:12:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-28 07:12:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-28 07:12:28] Further information can be found at the LHC@home message board.
[2026-01-28 07:12:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-28 07:12:28] Checking for apptainer binary...
[2026-01-28 07:12:28] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-28 07:12:28] Running /usr/bin/apptainer --version
[2026-01-28 07:12:28] apptainer version 1.4.5-2.el9
[2026-01-28 07:12:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-28 07:12:29] c-210-31-3.aglt2.org
[2026-01-28 07:12:29] apptainer works
[2026-01-28 07:12:29] Set ATHENA_PROC_NUMBER=8
[2026-01-28 07:12:29] Set ATHENA_CORE_NUMBER=8
[2026-01-28 07:12:29] Starting ATLAS job with PandaID=6984578330
[2026-01-28 07:12:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-28 13:15:31]  *** The last 200 lines of the pilot log: ***
[2026-01-28 13:15:31] 2026-01-28 18:14:54,428 | INFO     | total number of processed events: 400 (read)
[2026-01-28 13:15:31] 2026-01-28 18:14:54,445 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6984578330/memory_monitor_summary.json (trf name=prmon)
[2026-01-28 13:15:31] 2026-01-28 18:14:54,446 | INFO     | extracted standard info from prmon json
[2026-01-28 13:15:31] 2026-01-28 18:14:54,446 | INFO     | extracted standard memory fields from prmon json
[2026-01-28 13:15:31] 2026-01-28 18:14:54,446 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-28 13:15:31] 2026-01-28 18:14:54,446 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-28 13:15:31] 2026-01-28 18:14:54,446 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-28 13:15:31] 2026-01-28 18:14:54,468 | INFO     | fitting pss+swap vs Time
[2026-01-28 13:15:31] 2026-01-28 18:14:54,469 | INFO     | sum of square deviations: 13639550535.779022
[2026-01-28 13:15:31] 2026-01-28 18:14:54,479 | INFO     | sum of deviations: 75664277466.93507
[2026-01-28 13:15:31] 2026-01-28 18:14:54,479 | INFO     | mean x: 1769613294.9206798
[2026-01-28 13:15:31] 2026-01-28 18:14:54,480 | INFO     | mean y: 2666872.104815864
[2026-01-28 13:15:31] 2026-01-28 18:14:54,480 | INFO     | intersect: -9814116386.611856
[2026-01-28 13:15:31] 2026-01-28 18:14:54,480 | INFO     | chi2: 5.730880340475254
[2026-01-28 13:15:31] 2026-01-28 18:14:54,482 | INFO     | sum of square deviations: 13068191593.204018
[2026-01-28 13:15:31] 2026-01-28 18:14:54,492 | INFO     | sum of deviations: 151294752742.69266
[2026-01-28 13:15:31] 2026-01-28 18:14:54,492 | INFO     | mean x: 1769613142.428161
[2026-01-28 13:15:31] 2026-01-28 18:14:54,492 | INFO     | mean y: 2686937.8477011495
[2026-01-28 13:15:31] 2026-01-28 18:14:54,492 | INFO     | intersect: -20484706510.92297
[2026-01-28 13:15:31] 2026-01-28 18:14:54,493 | INFO     | chi2: 3.300764650890364
[2026-01-28 13:15:31] 2026-01-28 18:14:54,493 | INFO     | current chi2=3.300764650890364 (change=42.40388117025951 %)
[2026-01-28 13:15:31] 2026-01-28 18:14:54,493 | INFO     | sum of square deviations: 12512933480.02919
[2026-01-28 13:15:31] 2026-01-28 18:14:54,504 | INFO     | sum of deviations: 148789652543.44022
[2026-01-28 13:15:31] 2026-01-28 18:14:54,504 | INFO     | mean x: 1769612989.9241982
[2026-01-28 13:15:31] 2026-01-28 18:14:54,504 | INFO     | mean y: 2686253.055393586
[2026-01-28 13:15:31] 2026-01-28 18:14:54,504 | INFO     | intersect: -21039549952.1806
[2026-01-28 13:15:31] 2026-01-28 18:14:54,505 | INFO     | chi2: 3.3003570728276075
[2026-01-28 13:15:31] 2026-01-28 18:14:54,505 | INFO     | current chi2=3.3003570728276075 (change=0.012347989204453978 %)
[2026-01-28 13:15:31] 2026-01-28 18:14:54,505 | INFO     | right removable region: 342
[2026-01-28 13:15:31] 2026-01-28 18:14:54,506 | INFO     | sum of square deviations: 13068057453.344873
[2026-01-28 13:15:31] 2026-01-28 18:14:54,516 | INFO     | sum of deviations: -27387496924.39652
[2026-01-28 13:15:31] 2026-01-28 18:14:54,516 | INFO     | mean x: 1769613447.4310346
[2026-01-28 13:15:31] 2026-01-28 18:14:54,516 | INFO     | mean y: 2694320.7959770113
[2026-01-28 13:15:31] 2026-01-28 18:14:54,516 | INFO     | intersect: 3711377345.944685
[2026-01-28 13:15:31] 2026-01-28 18:14:54,517 | INFO     | chi2: 2.9672938269571434
[2026-01-28 13:15:31] 2026-01-28 18:14:54,517 | INFO     | current chi2=2.9672938269571434 (change=48.22272232766476 %)
[2026-01-28 13:15:31] 2026-01-28 18:14:54,517 | INFO     | sum of square deviations: 12512814651.4577
[2026-01-28 13:15:31] 2026-01-28 18:14:54,528 | INFO     | sum of deviations: -62940382045.57143
[2026-01-28 13:15:31] 2026-01-28 18:14:54,528 | INFO     | mean x: 1769613599.9329445
[2026-01-28 13:15:31] 2026-01-28 18:14:54,528 | INFO     | mean y: 2704076.714285714
[2026-01-28 13:15:31] 2026-01-28 18:14:54,528 | INFO     | intersect: 8903991209.56917
[2026-01-28 13:15:31] 2026-01-28 18:14:54,529 | INFO     | chi2: 2.6503004841597178
[2026-01-28 13:15:31] 2026-01-28 18:14:54,529 | INFO     | current chi2=2.6503004841597178 (change=10.682910466015134 %)
[2026-01-28 13:15:31] 2026-01-28 18:14:54,529 | INFO     | left removable region: 20
[2026-01-28 13:15:31] 2026-01-28 18:14:54,529 | INFO     | sum of square deviations: 10352380843.257706
[2026-01-28 13:15:31] 2026-01-28 18:14:54,539 | INFO     | sum of deviations: -14016348262.161493
[2026-01-28 13:15:31] 2026-01-28 18:14:54,540 | INFO     | mean x: 1769613569.4378881
[2026-01-28 13:15:31] 2026-01-28 18:14:54,540 | INFO     | mean y: 2733330.2919254657
[2026-01-28 13:15:31] 2026-01-28 18:14:54,540 | INFO     | intersect: 2398657558.180254
[2026-01-28 13:15:31] 2026-01-28 18:14:54,540 | INFO     | chi2: 0.029780479906204565
[2026-01-28 13:15:31] 2026-01-28 18:14:54,541 | INFO     | current memory leak: -1.35 B/s (using 322 data points, chi2=0.03)
[2026-01-28 13:15:31] 2026-01-28 18:14:54,541 | INFO     | could have reported an average CPU frequency of 2948 MHz (15 samples)
[2026-01-28 13:15:31] 2026-01-28 18:14:54,541 | INFO     | ..............................
[2026-01-28 13:15:31] 2026-01-28 18:14:54,541 | INFO     | . Timing measurements:
[2026-01-28 13:15:31] 2026-01-28 18:14:54,541 | INFO     | . get job = 0 s
[2026-01-28 13:15:31] 2026-01-28 18:14:54,542 | INFO     | . initial setup = 42 s
[2026-01-28 13:15:31] 2026-01-28 18:14:54,542 | INFO     | . payload setup = 49 s
[2026-01-28 13:15:31] 2026-01-28 18:14:54,542 | INFO     | . stage-in = 0 s
[2026-01-28 13:15:31] 2026-01-28 18:14:54,542 | INFO     | . payload execution = 21556 s
[2026-01-28 13:15:31] 2026-01-28 18:14:54,542 | INFO     | . stage-out = 5 s
[2026-01-28 13:15:31] 2026-01-28 18:14:54,542 | INFO     | . log creation = 0 s
[2026-01-28 13:15:31] 2026-01-28 18:14:54,542 | INFO     | ..............................
[2026-01-28 13:15:31] 2026-01-28 18:14:54,683 | INFO     | time since job start (21622s) is within the limit (349056.0s)
[2026-01-28 13:15:31] 2026-01-28 18:14:55,220 | INFO     | 
[2026-01-28 13:15:31] 2026-01-28 18:14:55,220 | INFO     | job summary report
[2026-01-28 13:15:31] 2026-01-28 18:14:55,220 | INFO     | --------------------------------------------------
[2026-01-28 13:15:31] 2026-01-28 18:14:55,220 | INFO     | PanDA job id: 6984578330
[2026-01-28 13:15:31] 2026-01-28 18:14:55,220 | INFO     | task id: 48317911
[2026-01-28 13:15:31] 2026-01-28 18:14:55,220 | INFO     | errors: (none)
[2026-01-28 13:15:31] 2026-01-28 18:14:55,220 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-28 13:15:31] 2026-01-28 18:14:55,220 | INFO     | pilot state: finished 
[2026-01-28 13:15:31] 2026-01-28 18:14:55,220 | INFO     | transexitcode: 0
[2026-01-28 13:15:31] 2026-01-28 18:14:55,220 | INFO     | exeerrorcode: 0
[2026-01-28 13:15:31] 2026-01-28 18:14:55,221 | INFO     | exeerrordiag: 
[2026-01-28 13:15:31] 2026-01-28 18:14:55,221 | INFO     | exitcode: 0
[2026-01-28 13:15:31] 2026-01-28 18:14:55,221 | INFO     | exitmsg: OK
[2026-01-28 13:15:31] 2026-01-28 18:14:55,221 | INFO     | cpuconsumptiontime: 44969 s
[2026-01-28 13:15:31] 2026-01-28 18:14:55,221 | INFO     | nevents: 400
[2026-01-28 13:15:31] 2026-01-28 18:14:55,221 | INFO     | neventsw: 0
[2026-01-28 13:15:31] 2026-01-28 18:14:55,221 | INFO     | pid: 3478522
[2026-01-28 13:15:31] 2026-01-28 18:14:55,221 | INFO     | pgrp: 3478522
[2026-01-28 13:15:31] 2026-01-28 18:14:55,221 | INFO     | corecount: 8
[2026-01-28 13:15:31] 2026-01-28 18:14:55,221 | INFO     | event service: False
[2026-01-28 13:15:31] 2026-01-28 18:14:55,221 | INFO     | sizes: {0: 2283122, 1: 2254359, 2: 2284268, 21610: 2318076, 21611: 2318075, 21619: 2327129, 21620: 2327507}
[2026-01-28 13:15:31] 2026-01-28 18:14:55,221 | INFO     | --------------------------------------------------
[2026-01-28 13:15:31] 2026-01-28 18:14:55,221 | INFO     | 
[2026-01-28 13:15:31] 2026-01-28 18:14:55,221 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-28 13:15:31] 2026-01-28 18:14:55,359 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-28 13:15:31] 2026-01-28 18:14:55,359 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-28 13:15:31] 2026-01-28 18:14:55,359 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-28 13:15:31] 2026-01-28 18:14:55,360 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-28 13:15:31] 2026-01-28 18:14:55,360 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-28 13:15:31] 2026-01-28 18:14:55,360 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-28 13:15:31] 2026-01-28 18:14:55,360 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-28 13:15:31] 2026-01-28 18:14:55,360 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-28 13:15:31] 2026-01-28 18:14:55,360 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-28 13:15:31] 2026-01-28 18:14:55,360 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-28 13:15:31] 2026-01-28 18:14:55,360 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-28 13:15:31] 2026-01-28 18:14:55,360 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-28 13:15:31] 2026-01-28 18:14:55,360 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-28 13:15:31] 2026-01-28 18:14:55,360 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-28 13:15:31] 2026-01-28 18:14:55,360 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-28 13:15:31] 2026-01-28 18:14:55,360 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-28 13:15:31] 2026-01-28 18:14:55,360 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-28 13:15:31] 2026-01-28 18:14:55,360 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-28 13:15:31] 2026-01-28 18:14:55,361 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-28 13:15:31] 2026-01-28 18:14:55,361 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-28 13:15:31] 2026-01-28 18:14:55,361 | INFO     | job 6984578330 has completed (purged errors)
[2026-01-28 13:15:31] 2026-01-28 18:14:55,361 | INFO     | overall cleanup function is called
[2026-01-28 13:15:31] 2026-01-28 18:14:56,402 | INFO     | --- collectZombieJob: --- 10, [3478522]
[2026-01-28 13:15:31] 2026-01-28 18:14:56,402 | INFO     | zombie collector waiting for pid 3478522
[2026-01-28 13:15:31] 2026-01-28 18:14:56,402 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-28 13:15:31] 2026-01-28 18:14:56,402 | INFO     | collected zombie processes
[2026-01-28 13:15:31] 2026-01-28 18:14:56,402 | INFO     | will attempt to kill all subprocesses of pid=3478522
[2026-01-28 13:15:31] 2026-01-28 18:14:57,553 | INFO     | process IDs to be killed: [3478522] (in reverse order)
[2026-01-28 13:15:31] 2026-01-28 18:14:57,793 | WARNING  | found no corresponding commands to process id(s)
[2026-01-28 13:15:31] 2026-01-28 18:14:57,794 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-28 13:15:31] 2026-01-28 18:14:57,817 | INFO     | did not find any defunct processes belonging to 3478522
[2026-01-28 13:15:31] 2026-01-28 18:14:57,836 | INFO     | did not find any defunct processes belonging to 3478522
[2026-01-28 13:15:31] 2026-01-28 18:14:57,841 | INFO     | ready for new job
[2026-01-28 13:15:31] 2026-01-28 18:14:57,841 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-28 13:15:31] 2026-01-28 18:14:57,843 | INFO     | **************************************
[2026-01-28 13:15:31] 2026-01-28 18:14:57,844 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-28 13:15:31] 2026-01-28 18:14:57,844 | INFO     | **************************************
[2026-01-28 13:15:31] 2026-01-28 18:14:57,844 | INFO     | 
[2026-01-28 13:15:31] 2026-01-28 18:14:57,851 | INFO     | architecture information:
[2026-01-28 13:15:31] 2026-01-28 18:14:57,855 | INFO     | executing command: cat /etc/os-release
[2026-01-28 13:15:31] 2026-01-28 18:14:58,118 | INFO     | cat /etc/os-release:
[2026-01-28 13:15:31] NAME="CentOS Linux"
[2026-01-28 13:15:31] VERSION="7 (Core)"
[2026-01-28 13:15:31] ID="centos"
[2026-01-28 13:15:31] ID_LIKE="rhel fedora"
[2026-01-28 13:15:31] VERSION_ID="7"
[2026-01-28 13:15:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-28 13:15:31] ANSI_COLOR="0;31"
[2026-01-28 13:15:31] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-28 13:15:31] HOME_URL="https://www.centos.org/"
[2026-01-28 13:15:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-28 13:15:31] 
[2026-01-28 13:15:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-28 13:15:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-28 13:15:31] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-28 13:15:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-28 13:15:31] 
[2026-01-28 13:15:31] 2026-01-28 18:14:58,118 | INFO     | **************************************
[2026-01-28 13:15:31] 2026-01-28 18:14:58,622 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-28 13:15:31] 2026-01-28 18:14:58,830 | INFO     | sufficient remaining disk space (72695676928 B)
[2026-01-28 13:15:31] 2026-01-28 18:14:58,830 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-28 13:15:31] 2026-01-28 18:14:58,831 | INFO     | current server update state: UPDATING_FINAL
[2026-01-28 13:15:31] 2026-01-28 18:14:58,831 | INFO     | update_server=False
[2026-01-28 13:15:31] 2026-01-28 18:14:58,831 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-28 13:15:31] 2026-01-28 18:14:58,831 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-28 13:15:31] 2026-01-28 18:14:58,955 | INFO     | all data control threads have been joined
[2026-01-28 13:15:31] 2026-01-28 18:14:59,247 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-28 13:15:31] 2026-01-28 18:14:59,247 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-28 13:15:31] 2026-01-28 18:14:59,270 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-28 13:15:31] 2026-01-28 18:14:59,270 | INFO     | will abort loop
[2026-01-28 13:15:31] 2026-01-28 18:14:59,836 | INFO     | [job] retrieve thread has finished
[2026-01-28 13:15:31] 2026-01-28 18:14:59,953 | INFO     | all payload control threads have been joined
[2026-01-28 13:15:31] 2026-01-28 18:14:59,953 | INFO     | all job control threads have been joined
[2026-01-28 13:15:31] 2026-01-28 18:14:59,964 | INFO     | [data] control thread has finished
[2026-01-28 13:15:31] 2026-01-28 18:15:00,071 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-28 13:15:31] 2026-01-28 18:15:00,276 | INFO     | [job] job monitor thread has finished
[2026-01-28 13:15:31] 2026-01-28 18:15:00,291 | INFO     | [payload] execute_payloads thread has finished
[2026-01-28 13:15:31] 2026-01-28 18:15:00,350 | INFO     | [payload] validate_post thread has finished
[2026-01-28 13:15:31] 2026-01-28 18:15:00,359 | INFO     | [payload] failed_post thread has finished
[2026-01-28 13:15:31] 2026-01-28 18:15:00,426 | INFO     | [data] copytool_in thread has finished
[2026-01-28 13:15:31] 2026-01-28 18:15:00,441 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-28 13:15:31] 2026-01-28 18:15:00,509 | INFO     | [job] create_data_payload thread has finished
[2026-01-28 13:15:31] 2026-01-28 18:15:00,555 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-28 13:15:31] 2026-01-28 18:15:00,781 | INFO     | [payload] validate_pre thread has finished
[2026-01-28 13:15:31] 2026-01-28 18:15:00,781 | INFO     | [job] validate thread has finished
[2026-01-28 13:15:31] 2026-01-28 18:15:00,868 | INFO     | [data] copytool_out thread has finished
[2026-01-28 13:15:31] 2026-01-28 18:15:00,959 | INFO     | [payload] control thread has finished
[2026-01-28 13:15:31] 2026-01-28 18:15:00,960 | INFO     | [job] control thread has finished
[2026-01-28 13:15:31] 2026-01-28 18:15:01,095 | INFO     | [job] queue monitor thread has finished
[2026-01-28 13:15:31] 2026-01-28 18:15:04,450 | INFO     | [data] queue_monitor thread has finished
[2026-01-28 13:15:31] 2026-01-28 18:15:10,488 | INFO     | [monitor] cgroup control has ended
[2026-01-28 13:15:31] 2026-01-28 18:15:10,975 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139986978260800)>', '<ExcThread(monitor, started 139986338838272)>']
[2026-01-28 13:15:31] 2026-01-28 18:15:16,001 | INFO     | all workflow threads have been joined
[2026-01-28 13:15:31] 2026-01-28 18:15:16,001 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-28 13:15:31] 2026-01-28 18:15:16,001 | INFO     | traces error code: 0
[2026-01-28 13:15:31] 2026-01-28 18:15:16,002 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-28 13:15:31] 2026-01-28 18:15:28,760 | INFO     | PID=3468452 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-28 13:15:31] 2026-01-28 18:15:28,761 | INFO     | .. there are 17 such processes running
[2026-01-28 13:15:31] 2026-01-28 18:15:28,762 | INFO     | found 0 job(s) in 20 queues
[2026-01-28 13:15:31] 2026-01-28 18:15:28,762 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-28 13:15:31] 2026-01-28 18:15:28,762 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-28 13:15:31] 2026-01-28 18:15:28,762 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-28 13:15:31] 2026-01-28 18:15:28,762 | INFO     | [monitor] control thread has ended
[2026-01-28 13:15:31] 2026-01-28 18:15:29,029 [wrapper] ==== pilot stdout END ====
[2026-01-28 13:15:31] 2026-01-28 18:15:29,032 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-28 13:15:31] 2026-01-28 18:15:29,034 [wrapper] pilotpid: 3468452
[2026-01-28 13:15:31] 2026-01-28 18:15:29,036 [wrapper] Pilot exit status: 0
[2026-01-28 13:15:31] 2026-01-28 18:15:29,283 [wrapper] pandaids: 6984578330
[2026-01-28 13:15:31] 2026-01-28 18:15:30,417 [wrapper] cleanup supervisor_pilot 4159441 3468453
[2026-01-28 13:15:31] 2026-01-28 18:15:30,429 [wrapper] Test setup, not cleaning
[2026-01-28 13:15:31] 2026-01-28 18:15:30,443 [wrapper] apfmon messages muted
[2026-01-28 13:15:31] 2026-01-28 18:15:30,495 [wrapper] ==== wrapper stdout END ====
[2026-01-28 13:15:31] 2026-01-28 18:15:30,511 [wrapper] ==== wrapper stderr END ====
[2026-01-28 13:15:31]  *** Error codes and diagnostics ***
[2026-01-28 13:15:31]     "exeErrorCode": 0,
[2026-01-28 13:15:31]     "exeErrorDiag": "",
[2026-01-28 13:15:31]     "pilotErrorCode": 0,
[2026-01-28 13:15:31]     "pilotErrorDiag": "",
[2026-01-28 13:15:31]  *** Listing of results directory ***
[2026-01-28 13:15:31] total 734844
[2026-01-28 13:15:31] -rw-r--r--. 1 boincer umatlas    584422 Jan 28 06:53 pilot3.tar.gz
[2026-01-28 13:15:31] -rwx------. 1 boincer umatlas     36322 Jan 28 06:54 runpilot2-wrapper.sh
[2026-01-28 13:15:31] -rw-r--r--. 1 boincer umatlas      5111 Jan 28 06:54 queuedata.json
[2026-01-28 13:15:31] -rw-r--r--. 1 boincer umatlas       100 Jan 28 07:12 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-28 13:15:31] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 28 07:12 run_atlas
[2026-01-28 13:15:31] -rw-r--r--. 1 boincer umatlas       105 Jan 28 07:12 job.xml
[2026-01-28 13:15:31] -rw-r--r--. 2 boincer umatlas 537397319 Jan 28 07:12 EVNT.48317909._000057.pool.root.1
[2026-01-28 13:15:31] -rw-r--r--. 2 boincer umatlas     15845 Jan 28 07:12 start_atlas.sh
[2026-01-28 13:15:31] drwxrwx--x. 2 boincer umatlas      4096 Jan 28 07:12 shared
[2026-01-28 13:15:31] -rw-r--r--. 2 boincer umatlas    597760 Jan 28 07:12 input.tar.gz
[2026-01-28 13:15:31] -rw-r--r--. 1 boincer umatlas         0 Jan 28 07:12 boinc_lockfile
[2026-01-28 13:15:31] -rw-r--r--. 1 boincer umatlas      2501 Jan 28 07:12 pandaJob.out
[2026-01-28 13:15:31] -rw-------. 1 boincer umatlas        57 Jan 28 07:12 setup.sh.local
[2026-01-28 13:15:31] -rw-------. 1 boincer umatlas   1005192 Jan 28 07:13 agis_schedconf.cvmfs.json
[2026-01-28 13:15:31] -rw-------. 1 boincer umatlas       442 Jan 28 07:14 workernode_map.json
[2026-01-28 13:15:31] drwx------. 5 boincer umatlas      4096 Jan 28 07:14 pilot3
[2026-01-28 13:15:31] -rw-------. 1 boincer umatlas 204420615 Jan 28 13:11 HITS.48317911._002967.pool.root.1
[2026-01-28 13:15:31] -rw-r--r--. 1 boincer umatlas       532 Jan 28 13:11 boinc_task_state.xml
[2026-01-28 13:15:31] -rw-r--r--. 1 boincer umatlas      6843 Jan 28 13:13 init_data.xml
[2026-01-28 13:15:31] -rw-------. 1 boincer umatlas      1042 Jan 28 13:14 memory_monitor_summary.json
[2026-01-28 13:15:31] -rw-------. 1 boincer umatlas   1516246 Jan 28 13:14 agis_ddmendpoints.agis.ALL.json
[2026-01-28 13:15:31] -rw-------. 1 boincer umatlas    583743 Jan 28 13:14 log.48317911._002967.job.log.tgz.1
[2026-01-28 13:15:31] -rw-------. 1 boincer umatlas      6398 Jan 28 13:14 heartbeat.json
[2026-01-28 13:15:31] -rw-r--r--. 1 boincer umatlas        28 Jan 28 13:15 wrapper_checkpoint.txt
[2026-01-28 13:15:31] -rw-r--r--. 1 boincer umatlas      8192 Jan 28 13:15 boinc_mmap_file
[2026-01-28 13:15:31] -rw-------. 1 boincer umatlas        95 Jan 28 13:15 pilot_heartbeat.json
[2026-01-28 13:15:31] -rw-------. 1 boincer umatlas       823 Jan 28 13:15 pilotlog.txt
[2026-01-28 13:15:31] -rw-------. 1 boincer umatlas   2774076 Jan 28 13:15 log.48317911._002967.job.log.1
[2026-01-28 13:15:31] -rw-------. 1 boincer umatlas       357 Jan 28 13:15 output.list
[2026-01-28 13:15:31] -rw-r--r--. 1 boincer umatlas       620 Jan 28 13:15 runtime_log
[2026-01-28 13:15:31] -rw-------. 1 boincer umatlas   3379200 Jan 28 13:15 result.tar.gz
[2026-01-28 13:15:31] -rw-r--r--. 1 boincer umatlas      9352 Jan 28 13:15 runtime_log.err
[2026-01-28 13:15:31] -rw-------. 1 boincer umatlas       656 Jan 28 13:15 bzIMDmmIJ58nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmACFKDmX4O2on.diag
[2026-01-28 13:15:31] -rw-r--r--. 1 boincer umatlas     21151 Jan 28 13:15 stderr.txt
[2026-01-28 13:15:31] HITS file was successfully produced:
[2026-01-28 13:15:31] -rw-------. 1 boincer umatlas 204420615 Jan 28 13:11 shared/HITS.pool.root.1
[2026-01-28 13:15:31]  *** Contents of shared directory: ***
[2026-01-28 13:15:31] total 728344
[2026-01-28 13:15:31] -rw-r--r--. 2 boincer umatlas 537397319 Jan 28 07:12 ATLAS.root_0
[2026-01-28 13:15:31] -rw-r--r--. 2 boincer umatlas     15845 Jan 28 07:12 start_atlas.sh
[2026-01-28 13:15:31] -rw-r--r--. 2 boincer umatlas    597760 Jan 28 07:12 input.tar.gz
[2026-01-28 13:15:31] -rw-------. 1 boincer umatlas 204420615 Jan 28 13:11 HITS.pool.root.1
[2026-01-28 13:15:31] -rw-------. 1 boincer umatlas   3379200 Jan 28 13:15 result.tar.gz
13:15:33 (3457797): run_atlas exited; CPU time 45541.007831
13:15:33 (3457797): called boinc_finish(0)

</stderr_txt>
]]>

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