Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:38:15 (2194565): wrapper (7.7.26015): starting
19:38:15 (2194565): wrapper: running run_atlas (--nthreads 9)
[2026-01-27 19:38:15] Arguments: --nthreads 9
[2026-01-27 19:38:15] Threads: 9
[2026-01-27 19:38:15] Checking for CVMFS
[2026-01-27 19:38:16] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-27 19:38:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-27 19:38:17] Running cvmfs_config stat atlas.cern.ch
[2026-01-27 19:38:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-27 19:38:20] 2.13.3.0 13071 56727 389104 155605 3 178 29201976 32935936 31180 16776704 0 79463936 99.590 90213351 12662 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-27 19:38:20] CVMFS is ok
[2026-01-27 19:38:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-27 19:38:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-27 19:38:20] Further information can be found at the LHC@home message board.
[2026-01-27 19:38:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-27 19:38:20] Checking for apptainer binary...
[2026-01-27 19:38:20] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-27 19:38:20] Running /usr/bin/apptainer --version
[2026-01-27 19:38:20] apptainer version 1.4.5-2.el9
[2026-01-27 19:38:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-27 19:38:22] c6-12-25-4.aglt2.org
[2026-01-27 19:38:22] apptainer works
[2026-01-27 19:38:22] Set ATHENA_PROC_NUMBER=9
[2026-01-27 19:38:22] Set ATHENA_CORE_NUMBER=9
[2026-01-27 19:38:22] Starting ATLAS job with PandaID=6982690931
[2026-01-27 19:38:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-28 03:56:05]  *** The last 200 lines of the pilot log: ***
[2026-01-28 03:56:05] 2026-01-28 08:55:20,167 | INFO     | job 6982690931 has finished - writing final server update
[2026-01-28 03:56:05] 2026-01-28 08:55:20,168 | INFO     | total number of processed events: 400 (read)
[2026-01-28 03:56:05] 2026-01-28 08:55:20,219 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6982690931/memory_monitor_summary.json (trf name=prmon)
[2026-01-28 03:56:05] 2026-01-28 08:55:20,220 | INFO     | extracted standard info from prmon json
[2026-01-28 03:56:05] 2026-01-28 08:55:20,221 | INFO     | extracted standard memory fields from prmon json
[2026-01-28 03:56:05] 2026-01-28 08:55:20,221 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-28 03:56:05] 2026-01-28 08:55:20,222 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-28 03:56:05] 2026-01-28 08:55:20,222 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-28 03:56:05] 2026-01-28 08:55:20,251 | INFO     | fitting pss+swap vs Time
[2026-01-28 03:56:05] 2026-01-28 08:55:20,253 | INFO     | sum of square deviations: 35156464872.750015
[2026-01-28 03:56:05] 2026-01-28 08:55:20,280 | INFO     | sum of deviations: 228478817814.4548
[2026-01-28 03:56:05] 2026-01-28 08:55:20,280 | INFO     | mean x: 1769575718.3863637
[2026-01-28 03:56:05] 2026-01-28 08:55:20,281 | INFO     | mean y: 2513536.917355372
[2026-01-28 03:56:05] 2026-01-28 08:55:20,281 | INFO     | intersect: -11497805668.483315
[2026-01-28 03:56:05] 2026-01-28 08:55:20,283 | INFO     | chi2: 5.663388654580714
[2026-01-28 03:56:05] 2026-01-28 08:55:20,285 | INFO     | sum of square deviations: 34078231308.78076
[2026-01-28 03:56:05] 2026-01-28 08:55:20,333 | INFO     | sum of deviations: 258798029053.68893
[2026-01-28 03:56:05] 2026-01-28 08:55:20,333 | INFO     | mean x: 1769575565.8956158
[2026-01-28 03:56:05] 2026-01-28 08:55:20,334 | INFO     | mean y: 2517785.6137787057
[2026-01-28 03:56:05] 2026-01-28 08:55:20,334 | INFO     | intersect: -13436051386.764328
[2026-01-28 03:56:05] 2026-01-28 08:55:20,336 | INFO     | chi2: 4.894266974697511
[2026-01-28 03:56:05] 2026-01-28 08:55:20,336 | INFO     | current chi2=4.894266974697511 (change=13.58059152908595 %)
[2026-01-28 03:56:05] 2026-01-28 08:55:20,337 | INFO     | right removable region: 478
[2026-01-28 03:56:05] 2026-01-28 08:55:20,338 | INFO     | sum of square deviations: 34078028302.35486
[2026-01-28 03:56:05] 2026-01-28 08:55:20,356 | INFO     | sum of deviations: 77451584072.6532
[2026-01-28 03:56:05] 2026-01-28 08:55:20,357 | INFO     | mean x: 1769575870.8914404
[2026-01-28 03:56:05] 2026-01-28 08:55:20,357 | INFO     | mean y: 2534875.6471816283
[2026-01-28 03:56:05] 2026-01-28 08:55:20,357 | INFO     | intersect: -4019307383.572259
[2026-01-28 03:56:05] 2026-01-28 08:55:20,359 | INFO     | chi2: 2.140677930539212
[2026-01-28 03:56:05] 2026-01-28 08:55:20,360 | INFO     | current chi2=2.140677930539212 (change=62.20146521627525 %)
[2026-01-28 03:56:05] 2026-01-28 08:55:20,361 | INFO     | sum of square deviations: 33021871341.43452
[2026-01-28 03:56:05] 2026-01-28 08:55:20,379 | INFO     | sum of deviations: -6063998508.751011
[2026-01-28 03:56:05] 2026-01-28 08:55:20,380 | INFO     | mean x: 1769576023.3966246
[2026-01-28 03:56:05] 2026-01-28 08:55:20,380 | INFO     | mean y: 2546918.780590717
[2026-01-28 03:56:05] 2026-01-28 08:55:20,380 | INFO     | intersect: 327504467.5532496
[2026-01-28 03:56:05] 2026-01-28 08:55:20,382 | INFO     | chi2: 1.063552724341219
[2026-01-28 03:56:05] 2026-01-28 08:55:20,383 | INFO     | current chi2=1.063552724341219 (change=50.31701363533363 %)
[2026-01-28 03:56:05] 2026-01-28 08:55:20,384 | INFO     | sum of square deviations: 31987732512.68222
[2026-01-28 03:56:05] 2026-01-28 08:55:20,422 | INFO     | sum of deviations: -34239039593.611958
[2026-01-28 03:56:05] 2026-01-28 08:55:20,423 | INFO     | mean x: 1769576175.904051
[2026-01-28 03:56:05] 2026-01-28 08:55:20,423 | INFO     | mean y: 2551071.1641791044
[2026-01-28 03:56:05] 2026-01-28 08:55:20,423 | INFO     | intersect: 1896670597.3503382
[2026-01-28 03:56:05] 2026-01-28 08:55:20,429 | INFO     | chi2: 0.9415055527690215
[2026-01-28 03:56:05] 2026-01-28 08:55:20,430 | INFO     | current chi2=0.9415055527690215 (change=11.475422776787628 %)
[2026-01-28 03:56:05] 2026-01-28 08:55:20,430 | INFO     | left removable region: 30
[2026-01-28 03:56:05] 2026-01-28 08:55:20,432 | INFO     | sum of square deviations: 27880495614.0625
[2026-01-28 03:56:05] 2026-01-28 08:55:20,494 | INFO     | sum of deviations: -5958740807.468754
[2026-01-28 03:56:05] 2026-01-28 08:55:20,498 | INFO     | mean x: 1769576450.40625
[2026-01-28 03:56:05] 2026-01-28 08:55:20,499 | INFO     | mean y: 2556335.3102678573
[2026-01-28 03:56:05] 2026-01-28 08:55:20,499 | INFO     | intersect: 380757912.24539846
[2026-01-28 03:56:05] 2026-01-28 08:55:20,501 | INFO     | chi2: 0.08794653131754203
[2026-01-28 03:56:05] 2026-01-28 08:55:20,501 | INFO     | current memory leak: -0.21 B/s (using 448 data points, chi2=0.09)
[2026-01-28 03:56:05] 2026-01-28 08:55:20,507 | INFO     | could have reported an average CPU frequency of 999 MHz (20 samples)
[2026-01-28 03:56:05] 2026-01-28 08:55:20,508 | INFO     | ..............................
[2026-01-28 03:56:05] 2026-01-28 08:55:20,508 | INFO     | . Timing measurements:
[2026-01-28 03:56:05] 2026-01-28 08:55:20,508 | INFO     | . get job = 1 s
[2026-01-28 03:56:05] 2026-01-28 08:55:20,508 | INFO     | . initial setup = 52 s
[2026-01-28 03:56:05] 2026-01-28 08:55:20,508 | INFO     | . payload setup = 62 s
[2026-01-28 03:56:05] 2026-01-28 08:55:20,509 | INFO     | . stage-in = 0 s
[2026-01-28 03:56:05] 2026-01-28 08:55:20,509 | INFO     | . payload execution = 29563 s
[2026-01-28 03:56:05] 2026-01-28 08:55:20,509 | INFO     | . stage-out = 8 s
[2026-01-28 03:56:05] 2026-01-28 08:55:20,509 | INFO     | . log creation = 3 s
[2026-01-28 03:56:05] 2026-01-28 08:55:20,509 | INFO     | ..............................
[2026-01-28 03:56:05] 2026-01-28 08:55:21,740 | INFO     | 
[2026-01-28 03:56:05] 2026-01-28 08:55:21,741 | INFO     | job summary report
[2026-01-28 03:56:05] 2026-01-28 08:55:21,741 | INFO     | --------------------------------------------------
[2026-01-28 03:56:05] 2026-01-28 08:55:21,741 | INFO     | PanDA job id: 6982690931
[2026-01-28 03:56:05] 2026-01-28 08:55:21,741 | INFO     | task id: 48310826
[2026-01-28 03:56:05] 2026-01-28 08:55:21,741 | INFO     | errors: (none)
[2026-01-28 03:56:05] 2026-01-28 08:55:21,741 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-28 03:56:05] 2026-01-28 08:55:21,742 | INFO     | pilot state: finished 
[2026-01-28 03:56:05] 2026-01-28 08:55:21,742 | INFO     | transexitcode: 0
[2026-01-28 03:56:05] 2026-01-28 08:55:21,742 | INFO     | exeerrorcode: 0
[2026-01-28 03:56:05] 2026-01-28 08:55:21,742 | INFO     | exeerrordiag: 
[2026-01-28 03:56:05] 2026-01-28 08:55:21,742 | INFO     | exitcode: 0
[2026-01-28 03:56:05] 2026-01-28 08:55:21,743 | INFO     | exitmsg: OK
[2026-01-28 03:56:05] 2026-01-28 08:55:21,743 | INFO     | cpuconsumptiontime: 102915 s
[2026-01-28 03:56:05] 2026-01-28 08:55:21,743 | INFO     | nevents: 400
[2026-01-28 03:56:05] 2026-01-28 08:55:21,743 | INFO     | neventsw: 0
[2026-01-28 03:56:05] 2026-01-28 08:55:21,743 | INFO     | pid: 2214352
[2026-01-28 03:56:05] 2026-01-28 08:55:21,743 | INFO     | pgrp: 2214352
[2026-01-28 03:56:05] 2026-01-28 08:55:21,744 | INFO     | corecount: 9
[2026-01-28 03:56:05] 2026-01-28 08:55:21,744 | INFO     | event service: False
[2026-01-28 03:56:05] 2026-01-28 08:55:21,775 | INFO     | sizes: {0: 2283153, 1: 2283754, 3: 2283838, 7: 2283866, 8: 2283866, 9: 2284483, 10: 2284483, 29631: 2320938, 29632: 2320937, 29642: 2329991, 29644: 2330047, 29649:
[2026-01-28 03:56:05] 2026-01-28 08:55:21,776 | INFO     | --------------------------------------------------
[2026-01-28 03:56:05] 2026-01-28 08:55:21,776 | INFO     | 
[2026-01-28 03:56:05] 2026-01-28 08:55:21,776 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-28 03:56:05] 2026-01-28 08:55:22,075 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-28 03:56:05] 2026-01-28 08:55:22,076 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-28 03:56:05] 2026-01-28 08:55:22,076 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-28 03:56:05] 2026-01-28 08:55:22,076 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-28 03:56:05] 2026-01-28 08:55:22,076 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-28 03:56:05] 2026-01-28 08:55:22,077 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-28 03:56:05] 2026-01-28 08:55:22,077 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-28 03:56:05] 2026-01-28 08:55:22,077 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-28 03:56:05] 2026-01-28 08:55:22,077 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-28 03:56:05] 2026-01-28 08:55:22,077 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-28 03:56:05] 2026-01-28 08:55:22,078 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-28 03:56:05] 2026-01-28 08:55:22,078 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-28 03:56:05] 2026-01-28 08:55:22,082 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-28 03:56:05] 2026-01-28 08:55:22,083 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-28 03:56:05] 2026-01-28 08:55:22,083 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-28 03:56:05] 2026-01-28 08:55:22,083 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-28 03:56:05] 2026-01-28 08:55:22,084 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-28 03:56:05] 2026-01-28 08:55:22,084 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-28 03:56:05] 2026-01-28 08:55:22,084 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-28 03:56:05] 2026-01-28 08:55:22,084 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-28 03:56:05] 2026-01-28 08:55:22,085 | INFO     | job 6982690931 has completed (purged errors)
[2026-01-28 03:56:05] 2026-01-28 08:55:22,085 | INFO     | overall cleanup function is called
[2026-01-28 03:56:05] 2026-01-28 08:55:22,526 | INFO     | PID=2203745 has CPU usage=26.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-28 03:56:05] 2026-01-28 08:55:22,527 | INFO     | .. there are 38 such processes running
[2026-01-28 03:56:05] 2026-01-28 08:55:23,131 | INFO     | --- collectZombieJob: --- 10, [2214352]
[2026-01-28 03:56:05] 2026-01-28 08:55:23,132 | INFO     | zombie collector waiting for pid 2214352
[2026-01-28 03:56:05] 2026-01-28 08:55:23,132 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-28 03:56:05] 2026-01-28 08:55:23,132 | INFO     | collected zombie processes
[2026-01-28 03:56:05] 2026-01-28 08:55:23,133 | INFO     | will attempt to kill all subprocesses of pid=2214352
[2026-01-28 03:56:05] 2026-01-28 08:55:26,968 | INFO     | process IDs to be killed: [2214352] (in reverse order)
[2026-01-28 03:56:05] 2026-01-28 08:55:27,508 | WARNING  | found no corresponding commands to process id(s)
[2026-01-28 03:56:05] 2026-01-28 08:55:27,542 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-28 03:56:05] 2026-01-28 08:55:27,749 | INFO     | did not find any defunct processes belonging to 2214352
[2026-01-28 03:56:05] 2026-01-28 08:55:27,847 | INFO     | did not find any defunct processes belonging to 2214352
[2026-01-28 03:56:05] 2026-01-28 08:55:27,848 | INFO     | ready for new job
[2026-01-28 03:56:05] 2026-01-28 08:55:27,853 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-28 03:56:05] 2026-01-28 08:55:27,865 | INFO     | **************************************
[2026-01-28 03:56:05] 2026-01-28 08:55:27,866 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-28 03:56:05] 2026-01-28 08:55:27,866 | INFO     | **************************************
[2026-01-28 03:56:05] 2026-01-28 08:55:27,866 | INFO     | 
[2026-01-28 03:56:05] 2026-01-28 08:55:27,898 | INFO     | architecture information:
[2026-01-28 03:56:05] 2026-01-28 08:55:27,902 | INFO     | executing command: cat /etc/os-release
[2026-01-28 03:56:05] 2026-01-28 08:55:28,056 | INFO     | cat /etc/os-release:
[2026-01-28 03:56:05] NAME="CentOS Linux"
[2026-01-28 03:56:05] VERSION="7 (Core)"
[2026-01-28 03:56:05] ID="centos"
[2026-01-28 03:56:05] ID_LIKE="rhel fedora"
[2026-01-28 03:56:05] VERSION_ID="7"
[2026-01-28 03:56:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-28 03:56:05] ANSI_COLOR="0;31"
[2026-01-28 03:56:05] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-28 03:56:05] HOME_URL="https://www.centos.org/"
[2026-01-28 03:56:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-28 03:56:05] 
[2026-01-28 03:56:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-28 03:56:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-28 03:56:05] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-28 03:56:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-28 03:56:05] 
[2026-01-28 03:56:05] 2026-01-28 08:55:28,057 | INFO     | **************************************
[2026-01-28 03:56:05] 2026-01-28 08:55:28,561 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-28 03:56:05] 2026-01-28 08:55:28,663 | INFO     | sufficient remaining disk space (91507130368 B)
[2026-01-28 03:56:05] 2026-01-28 08:55:28,664 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-28 03:56:05] 2026-01-28 08:55:28,664 | INFO     | current server update state: UPDATING_FINAL
[2026-01-28 03:56:05] 2026-01-28 08:55:28,664 | INFO     | update_server=False
[2026-01-28 03:56:05] 2026-01-28 08:55:28,665 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-28 03:56:05] 2026-01-28 08:55:28,665 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-28 03:56:05] 2026-01-28 08:55:28,774 | INFO     | all job control threads have been joined
[2026-01-28 03:56:05] 2026-01-28 08:55:29,124 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-28 03:56:05] 2026-01-28 08:55:29,125 | INFO     | aborting loop
[2026-01-28 03:56:05] 2026-01-28 08:55:29,431 | INFO     | all data control threads have been joined
[2026-01-28 03:56:05] 2026-01-28 08:55:29,672 | INFO     | [job] retrieve thread has finished
[2026-01-28 03:56:05] 2026-01-28 08:55:29,789 | INFO     | [job] control thread has finished
[2026-01-28 03:56:05] 2026-01-28 08:55:29,806 | INFO     | [payload] failed_post thread has finished
[2026-01-28 03:56:05] 2026-01-28 08:55:29,835 | INFO     | all payload control threads have been joined
[2026-01-28 03:56:05] 2026-01-28 08:55:30,125 | INFO     | [data] copytool_in thread has finished
[2026-01-28 03:56:05] 2026-01-28 08:55:30,132 | INFO     | [job] validate thread has finished
[2026-01-28 03:56:05] 2026-01-28 08:55:30,138 | INFO     | [payload] execute_payloads thread has finished
[2026-01-28 03:56:05] 2026-01-28 08:55:30,143 | INFO     | [job] job monitor thread has finished
[2026-01-28 03:56:05] 2026-01-28 08:55:30,327 | INFO     | [payload] validate_post thread has finished
[2026-01-28 03:56:05] 2026-01-28 08:55:30,444 | INFO     | [data] control thread has finished
[2026-01-28 03:56:05] 2026-01-28 08:55:30,523 | INFO     | [payload] validate_pre thread has finished
[2026-01-28 03:56:05] 2026-01-28 08:55:30,524 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-28 03:56:05] 2026-01-28 08:55:30,647 | INFO     | [job] create_data_payload thread has finished
[2026-01-28 03:56:05] 2026-01-28 08:55:30,672 | INFO     | [data] copytool_out thread has finished
[2026-01-28 03:56:05] 2026-01-28 08:55:30,819 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-28 03:56:05] 2026-01-28 08:55:30,841 | INFO     | [payload] control thread has finished
[2026-01-28 03:56:05] 2026-01-28 08:55:31,775 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-28 03:56:05] 2026-01-28 08:55:31,825 | INFO     | [job] queue monitor thread has finished
[2026-01-28 03:56:05] 2026-01-28 08:55:35,784 | INFO     | [data] queue_monitor thread has finished
[2026-01-28 03:56:05] 2026-01-28 08:55:55,928 | INFO     | [monitor] cgroup control has ended
[2026-01-28 03:56:05] 2026-01-28 08:55:57,082 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139954641610560)>', '<ExcThread(monitor, started 139954277553920)>']
[2026-01-28 03:56:05] 2026-01-28 08:55:58,144 | INFO     | PID=2203745 has CPU usage=10.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-28 03:56:05] 2026-01-28 08:55:58,145 | INFO     | .. there are 38 such processes running
[2026-01-28 03:56:05] 2026-01-28 08:55:58,147 | INFO     | found 0 job(s) in 20 queues
[2026-01-28 03:56:05] 2026-01-28 08:55:58,151 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-28 03:56:05] 2026-01-28 08:55:58,151 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-28 03:56:05] 2026-01-28 08:55:58,152 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-28 03:56:05] 2026-01-28 08:55:58,152 | INFO     | [monitor] control thread has ended
[2026-01-28 03:56:05] 2026-01-28 08:56:02,108 | INFO     | all workflow threads have been joined
[2026-01-28 03:56:05] 2026-01-28 08:56:02,109 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-28 03:56:05] 2026-01-28 08:56:02,110 | INFO     | traces error code: 0
[2026-01-28 03:56:05] 2026-01-28 08:56:02,110 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-28 03:56:05] 2026-01-28 08:56:03,562 [wrapper] ==== pilot stdout END ====
[2026-01-28 03:56:05] 2026-01-28 08:56:03,575 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-28 03:56:05] 2026-01-28 08:56:03,616 [wrapper] pilotpid: 2203745
[2026-01-28 03:56:05] 2026-01-28 08:56:03,666 [wrapper] Pilot exit status: 0
[2026-01-28 03:56:05] 2026-01-28 08:56:03,829 [wrapper] pandaids: 6982690931
[2026-01-28 03:56:05] 2026-01-28 08:56:04,650 [wrapper] cleanup supervisor_pilot 3315882 2203746
[2026-01-28 03:56:05] 2026-01-28 08:56:04,681 [wrapper] Test setup, not cleaning
[2026-01-28 03:56:05] 2026-01-28 08:56:04,730 [wrapper] apfmon messages muted
[2026-01-28 03:56:05] 2026-01-28 08:56:04,736 [wrapper] ==== wrapper stdout END ====
[2026-01-28 03:56:05] 2026-01-28 08:56:04,742 [wrapper] ==== wrapper stderr END ====
[2026-01-28 03:56:05]  *** Error codes and diagnostics ***
[2026-01-28 03:56:05]     "exeErrorCode": 0,
[2026-01-28 03:56:05]     "exeErrorDiag": "",
[2026-01-28 03:56:05]     "pilotErrorCode": 0,
[2026-01-28 03:56:05]     "pilotErrorDiag": "",
[2026-01-28 03:56:05]  *** Listing of results directory ***
[2026-01-28 03:56:05] total 669244
[2026-01-28 03:56:05] -rwx------. 1 boincer umatlas     36322 Jan 25 00:14 runpilot2-wrapper.sh
[2026-01-28 03:56:05] -rw-r--r--. 1 boincer umatlas      5111 Jan 25 00:15 queuedata.json
[2026-01-28 03:56:05] -rw-r--r--. 1 boincer umatlas    584422 Jan 25 00:15 pilot3.tar.gz
[2026-01-28 03:56:05] -rw-r--r--. 1 boincer umatlas       100 Jan 27 19:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-28 03:56:05] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 27 19:38 run_atlas
[2026-01-28 03:56:05] -rw-r--r--. 1 boincer umatlas       105 Jan 27 19:38 job.xml
[2026-01-28 03:56:05] -rw-r--r--. 2 boincer umatlas 494039143 Jan 27 19:38 EVNT.48310824._000114.pool.root.1
[2026-01-28 03:56:05] -rw-r--r--. 2 boincer umatlas     15845 Jan 27 19:38 start_atlas.sh
[2026-01-28 03:56:05] drwxrwx--x. 2 boincer umatlas      4096 Jan 27 19:38 shared
[2026-01-28 03:56:05] -rw-r--r--. 2 boincer umatlas    597755 Jan 27 19:38 input.tar.gz
[2026-01-28 03:56:05] -rw-r--r--. 1 boincer umatlas         0 Jan 27 19:38 boinc_lockfile
[2026-01-28 03:56:05] -rw-r--r--. 1 boincer umatlas      2524 Jan 27 19:38 pandaJob.out
[2026-01-28 03:56:05] -rw-------. 1 boincer umatlas        57 Jan 27 19:38 setup.sh.local
[2026-01-28 03:56:05] -rw-------. 1 boincer umatlas   1005240 Jan 27 19:40 agis_schedconf.cvmfs.json
[2026-01-28 03:56:05] -rw-------. 1 boincer umatlas       443 Jan 27 19:40 workernode_map.json
[2026-01-28 03:56:05] drwx------. 5 boincer umatlas      4096 Jan 27 19:41 pilot3
[2026-01-28 03:56:05] -rw-r--r--. 1 boincer umatlas      6859 Jan 28 03:49 init_data.xml
[2026-01-28 03:56:05] -rw-------. 1 boincer umatlas 180389786 Jan 28 03:53 HITS.48310826._009792.pool.root.1
[2026-01-28 03:56:05] -rw-r--r--. 1 boincer umatlas       532 Jan 28 03:53 boinc_task_state.xml
[2026-01-28 03:56:05] -rw-------. 1 boincer umatlas      1040 Jan 28 03:54 memory_monitor_summary.json
[2026-01-28 03:56:05] -rw-------. 1 boincer umatlas        95 Jan 28 03:55 pilot_heartbeat.json
[2026-01-28 03:56:05] -rw-------. 1 boincer umatlas   1516246 Jan 28 03:55 agis_ddmendpoints.agis.ALL.json
[2026-01-28 03:56:05] -rw-------. 1 boincer umatlas    625700 Jan 28 03:55 log.48310826._009792.job.log.tgz.1
[2026-01-28 03:56:05] -rw-------. 1 boincer umatlas      6397 Jan 28 03:55 heartbeat.json
[2026-01-28 03:56:05] -rw-r--r--. 1 boincer umatlas      8192 Jan 28 03:56 boinc_mmap_file
[2026-01-28 03:56:05] -rw-r--r--. 1 boincer umatlas        29 Jan 28 03:56 wrapper_checkpoint.txt
[2026-01-28 03:56:05] -rw-------. 1 boincer umatlas      4821 Jan 28 03:56 pilotlog.txt
[2026-01-28 03:56:05] -rw-------. 1 boincer umatlas   2842358 Jan 28 03:56 log.48310826._009792.job.log.1
[2026-01-28 03:56:05] -rw-------. 1 boincer umatlas       357 Jan 28 03:56 output.list
[2026-01-28 03:56:05] -rw-r--r--. 1 boincer umatlas       620 Jan 28 03:56 runtime_log
[2026-01-28 03:56:05] -rw-------. 1 boincer umatlas   3481600 Jan 28 03:56 result.tar.gz
[2026-01-28 03:56:05] -rw-------. 1 boincer umatlas       660 Jan 28 03:56 xa1KDmad738n9Rq4apOajLDm4fhM0noT9bVo0NGKDmDB0KDmchJ2mn.diag
[2026-01-28 03:56:05] -rw-r--r--. 1 boincer umatlas      9352 Jan 28 03:56 runtime_log.err
[2026-01-28 03:56:05] -rw-r--r--. 1 boincer umatlas     21286 Jan 28 03:56 stderr.txt
[2026-01-28 03:56:05] HITS file was successfully produced:
[2026-01-28 03:56:05] -rw-------. 1 boincer umatlas 180389786 Jan 28 03:53 shared/HITS.pool.root.1
[2026-01-28 03:56:05]  *** Contents of shared directory: ***
[2026-01-28 03:56:05] total 662636
[2026-01-28 03:56:05] -rw-r--r--. 2 boincer umatlas 494039143 Jan 27 19:38 ATLAS.root_0
[2026-01-28 03:56:05] -rw-r--r--. 2 boincer umatlas     15845 Jan 27 19:38 start_atlas.sh
[2026-01-28 03:56:05] -rw-r--r--. 2 boincer umatlas    597755 Jan 27 19:38 input.tar.gz
[2026-01-28 03:56:05] -rw-------. 1 boincer umatlas 180389786 Jan 28 03:53 HITS.pool.root.1
[2026-01-28 03:56:05] -rw-------. 1 boincer umatlas   3481600 Jan 28 03:56 result.tar.gz
03:56:07 (2194565): run_atlas exited; CPU time 105942.068392
03:56:07 (2194565): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN