Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:01:44 (3426421): wrapper (7.7.26015): starting
10:01:44 (3426421): wrapper: running run_atlas (--nthreads 9)
[2026-01-27 10:01:44] Arguments: --nthreads 9
[2026-01-27 10:01:44] Threads: 9
[2026-01-27 10:01:44] Checking for CVMFS
[2026-01-27 10:01:45] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-27 10:01:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-27 10:01:46] Running cvmfs_config stat atlas.cern.ch
[2026-01-27 10:01:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-27 10:01:47] 2.13.3.0 10299 119483 701476 155587 3 277 17780987 32935937 41199 16776704 0 1105420216 99.775 611465485 28881 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-27 10:01:47] CVMFS is ok
[2026-01-27 10:01:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-27 10:01:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-27 10:01:47] Further information can be found at the LHC@home message board.
[2026-01-27 10:01:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-27 10:01:47] Checking for apptainer binary...
[2026-01-27 10:01:47] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-27 10:01:47] Running /usr/bin/apptainer --version
[2026-01-27 10:01:47] apptainer version 1.4.5-2.el9
[2026-01-27 10:01:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-27 10:01:48] c-3-40.aglt2.org
[2026-01-27 10:01:48] apptainer works
[2026-01-27 10:01:48] Set ATHENA_PROC_NUMBER=9
[2026-01-27 10:01:48] Set ATHENA_CORE_NUMBER=9
[2026-01-27 10:01:48] Starting ATLAS job with PandaID=6976468789
[2026-01-27 10:01:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 23:58:53]  *** The last 200 lines of the pilot log: ***
[2026-01-27 23:58:54] 2026-01-28 04:58:03,439 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/1/workernode_map.json
[2026-01-27 23:58:54] 2026-01-28 04:58:03,439 | INFO     | this job has now completed (state=finished)
[2026-01-27 23:58:54] 2026-01-28 04:58:03,440 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-27 23:58:54] 2026-01-28 04:58:03,440 | INFO     | log transfer has been attempted: DONE
[2026-01-27 23:58:54] 2026-01-28 04:58:03,440 | INFO     | job 6976468789 has finished - writing final server update
[2026-01-27 23:58:54] 2026-01-28 04:58:03,440 | INFO     | total number of processed events: 350 (read)
[2026-01-27 23:58:54] 2026-01-28 04:58:03,470 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6976468789/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 23:58:54] 2026-01-28 04:58:03,470 | INFO     | extracted standard info from prmon json
[2026-01-27 23:58:54] 2026-01-28 04:58:03,470 | INFO     | extracted standard memory fields from prmon json
[2026-01-27 23:58:54] 2026-01-28 04:58:03,471 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-27 23:58:54] 2026-01-28 04:58:03,494 | INFO     | fitting pss+swap vs Time
[2026-01-27 23:58:54] 2026-01-28 04:58:03,496 | INFO     | sum of square deviations: 170944673942.51242
[2026-01-27 23:58:54] 2026-01-28 04:58:03,524 | INFO     | sum of deviations: 1373587740357.3538
[2026-01-27 23:58:54] 2026-01-28 04:58:03,524 | INFO     | mean x: 1769551260.5243902
[2026-01-27 23:58:54] 2026-01-28 04:58:03,524 | INFO     | mean y: 2877919.8573170733
[2026-01-27 23:58:54] 2026-01-28 04:58:03,524 | INFO     | intersect: -14215955936.338816
[2026-01-27 23:58:54] 2026-01-28 04:58:03,525 | INFO     | chi2: 15.090936238965263
[2026-01-27 23:58:54] 2026-01-28 04:58:03,530 | INFO     | sum of square deviations: 167836712636.8965
[2026-01-27 23:58:54] 2026-01-28 04:58:03,545 | INFO     | sum of deviations: 1670801480097.0833
[2026-01-27 23:58:54] 2026-01-28 04:58:03,545 | INFO     | mean x: 1769551108.03681
[2026-01-27 23:58:54] 2026-01-28 04:58:03,545 | INFO     | mean y: 2892507.063803681
[2026-01-27 23:58:54] 2026-01-28 04:58:03,545 | INFO     | intersect: -17612851771.791763
[2026-01-27 23:58:54] 2026-01-28 04:58:03,551 | INFO     | chi2: 11.434681429496788
[2026-01-27 23:58:54] 2026-01-28 04:58:03,551 | INFO     | current chi2=11.434681429496788 (change=24.228150934916233 %)
[2026-01-27 23:58:54] 2026-01-28 04:58:03,551 | INFO     | right removable region: 814
[2026-01-27 23:58:54] 2026-01-28 04:58:03,552 | INFO     | sum of square deviations: 167835700036.89645
[2026-01-27 23:58:54] 2026-01-28 04:58:03,573 | INFO     | sum of deviations: 1040389401268.5419
[2026-01-27 23:58:54] 2026-01-28 04:58:03,573 | INFO     | mean x: 1769551413.03681
[2026-01-27 23:58:54] 2026-01-28 04:58:03,573 | INFO     | mean y: 2894261.5153374234
[2026-01-27 23:58:54] 2026-01-28 04:58:03,573 | INFO     | intersect: -10966300818.664534
[2026-01-27 23:58:54] 2026-01-28 04:58:03,574 | INFO     | chi2: 10.76260843431518
[2026-01-27 23:58:54] 2026-01-28 04:58:03,574 | INFO     | current chi2=10.76260843431518 (change=28.681638674439615 %)
[2026-01-27 23:58:54] 2026-01-28 04:58:03,575 | INFO     | sum of square deviations: 164764633818.52478
[2026-01-27 23:58:54] 2026-01-28 04:58:03,586 | INFO     | sum of deviations: 764674118540.0745
[2026-01-27 23:58:54] 2026-01-28 04:58:03,587 | INFO     | mean x: 1769551565.5493827
[2026-01-27 23:58:54] 2026-01-28 04:58:03,587 | INFO     | mean y: 2907948.948148148
[2026-01-27 23:58:54] 2026-01-28 04:58:03,587 | INFO     | intersect: -8209596471.679213
[2026-01-27 23:58:54] 2026-01-28 04:58:03,588 | INFO     | chi2: 7.891182357243529
[2026-01-27 23:58:54] 2026-01-28 04:58:03,588 | INFO     | current chi2=7.891182357243529 (change=26.6796482896886 %)
[2026-01-27 23:58:54] 2026-01-28 04:58:03,589 | INFO     | sum of square deviations: 161731735356.01236
[2026-01-27 23:58:54] 2026-01-28 04:58:03,607 | INFO     | sum of deviations: 658693539611.6146
[2026-01-27 23:58:54] 2026-01-28 04:58:03,607 | INFO     | mean x: 1769551718.0496895
[2026-01-27 23:58:54] 2026-01-28 04:58:03,607 | INFO     | mean y: 2913268.4596273294
[2026-01-27 23:58:54] 2026-01-28 04:58:03,607 | INFO     | intersect: -7204035213.990036
[2026-01-27 23:58:54] 2026-01-28 04:58:03,608 | INFO     | chi2: 7.430534856953187
[2026-01-27 23:58:54] 2026-01-28 04:58:03,608 | INFO     | current chi2=7.430534856953187 (change=5.837496580819739 %)
[2026-01-27 23:58:54] 2026-01-28 04:58:03,609 | INFO     | left removable region: 30
[2026-01-27 23:58:54] 2026-01-28 04:58:03,609 | INFO     | sum of square deviations: 149401312952.69318
[2026-01-27 23:58:54] 2026-01-28 04:58:03,620 | INFO     | sum of deviations: 845447986971.5417
[2026-01-27 23:58:54] 2026-01-28 04:58:03,620 | INFO     | mean x: 1769551992.5408163
[2026-01-27 23:58:54] 2026-01-28 04:58:03,620 | INFO     | mean y: 2940021.37372449
[2026-01-27 23:58:54] 2026-01-28 04:58:03,620 | INFO     | intersect: -10010788374.767155
[2026-01-27 23:58:54] 2026-01-28 04:58:03,621 | INFO     | chi2: 2.8176704918489412
[2026-01-27 23:58:54] 2026-01-28 04:58:03,621 | INFO     | current memory leak: 5.66 B/s (using 784 data points, chi2=2.82)
[2026-01-27 23:58:54] 2026-01-28 04:58:03,622 | INFO     | could have reported an average CPU frequency of 3006 MHz (31 samples)
[2026-01-27 23:58:54] 2026-01-28 04:58:03,622 | INFO     | ..............................
[2026-01-27 23:58:54] 2026-01-28 04:58:03,622 | INFO     | . Timing measurements:
[2026-01-27 23:58:54] 2026-01-28 04:58:03,622 | INFO     | . get job = 0 s
[2026-01-27 23:58:54] 2026-01-28 04:58:03,623 | INFO     | . initial setup = 32 s
[2026-01-27 23:58:54] 2026-01-28 04:58:03,623 | INFO     | . payload setup = 40 s
[2026-01-27 23:58:54] 2026-01-28 04:58:03,623 | INFO     | . stage-in = 0 s
[2026-01-27 23:58:54] 2026-01-28 04:58:03,623 | INFO     | . payload execution = 50026 s
[2026-01-27 23:58:54] 2026-01-28 04:58:03,623 | INFO     | . stage-out = 3 s
[2026-01-27 23:58:54] 2026-01-28 04:58:03,623 | INFO     | . log creation = 0 s
[2026-01-27 23:58:54] 2026-01-28 04:58:03,623 | INFO     | ..............................
[2026-01-27 23:58:54] 2026-01-28 04:58:03,709 | INFO     | 
[2026-01-27 23:58:54] 2026-01-28 04:58:03,709 | INFO     | job summary report
[2026-01-27 23:58:54] 2026-01-28 04:58:03,710 | INFO     | --------------------------------------------------
[2026-01-27 23:58:54] 2026-01-28 04:58:03,710 | INFO     | PanDA job id: 6976468789
[2026-01-27 23:58:54] 2026-01-28 04:58:03,710 | INFO     | task id: 47961985
[2026-01-27 23:58:54] 2026-01-28 04:58:03,710 | INFO     | errors: (none)
[2026-01-27 23:58:54] 2026-01-28 04:58:03,710 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-27 23:58:54] 2026-01-28 04:58:03,710 | INFO     | pilot state: finished 
[2026-01-27 23:58:54] 2026-01-28 04:58:03,710 | INFO     | transexitcode: 0
[2026-01-27 23:58:54] 2026-01-28 04:58:03,710 | INFO     | exeerrorcode: 0
[2026-01-27 23:58:54] 2026-01-28 04:58:03,710 | INFO     | exeerrordiag: 
[2026-01-27 23:58:54] 2026-01-28 04:58:03,710 | INFO     | exitcode: 0
[2026-01-27 23:58:54] 2026-01-28 04:58:03,710 | INFO     | exitmsg: OK
[2026-01-27 23:58:54] 2026-01-28 04:58:03,710 | INFO     | cpuconsumptiontime: 116184 s
[2026-01-27 23:58:54] 2026-01-28 04:58:03,710 | INFO     | nevents: 350
[2026-01-27 23:58:54] 2026-01-28 04:58:03,710 | INFO     | neventsw: 0
[2026-01-27 23:58:54] 2026-01-28 04:58:03,710 | INFO     | pid: 3480600
[2026-01-27 23:58:54] 2026-01-28 04:58:03,710 | INFO     | pgrp: 3480600
[2026-01-27 23:58:54] 2026-01-28 04:58:03,711 | INFO     | corecount: 9
[2026-01-27 23:58:54] 2026-01-28 04:58:03,711 | INFO     | event service: False
[2026-01-27 23:58:54] 2026-01-28 04:58:03,711 | INFO     | sizes: {0: 2284379, 1: 2231574, 2: 2284840, 13: 2284868, 50071: 2332987, 50074: 2342165, 50075: 2342355}
[2026-01-27 23:58:54] 2026-01-28 04:58:03,711 | INFO     | --------------------------------------------------
[2026-01-27 23:58:54] 2026-01-28 04:58:03,711 | INFO     | 
[2026-01-27 23:58:54] 2026-01-28 04:58:03,711 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-27 23:58:54] 2026-01-28 04:58:03,736 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-27 23:58:54] 2026-01-28 04:58:03,737 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-27 23:58:54] 2026-01-28 04:58:03,737 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-27 23:58:54] 2026-01-28 04:58:03,737 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-27 23:58:54] 2026-01-28 04:58:03,737 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-27 23:58:54] 2026-01-28 04:58:03,737 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-27 23:58:54] 2026-01-28 04:58:03,737 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-27 23:58:54] 2026-01-28 04:58:03,737 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-27 23:58:54] 2026-01-28 04:58:03,737 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-27 23:58:54] 2026-01-28 04:58:03,737 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-27 23:58:54] 2026-01-28 04:58:03,737 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-27 23:58:54] 2026-01-28 04:58:03,737 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-27 23:58:54] 2026-01-28 04:58:03,737 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-27 23:58:54] 2026-01-28 04:58:03,738 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-27 23:58:54] 2026-01-28 04:58:03,738 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-27 23:58:54] 2026-01-28 04:58:03,738 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-27 23:58:54] 2026-01-28 04:58:03,738 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-27 23:58:54] 2026-01-28 04:58:03,738 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-27 23:58:54] 2026-01-28 04:58:03,738 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-27 23:58:54] 2026-01-28 04:58:03,738 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-27 23:58:54] 2026-01-28 04:58:03,738 | INFO     | job 6976468789 has completed (purged errors)
[2026-01-27 23:58:54] 2026-01-28 04:58:03,738 | INFO     | overall cleanup function is called
[2026-01-27 23:58:54] 2026-01-28 04:58:04,756 | INFO     | --- collectZombieJob: --- 10, [3480600]
[2026-01-27 23:58:54] 2026-01-28 04:58:04,756 | INFO     | zombie collector waiting for pid 3480600
[2026-01-27 23:58:54] 2026-01-28 04:58:04,756 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 23:58:54] 2026-01-28 04:58:04,756 | INFO     | collected zombie processes
[2026-01-27 23:58:54] 2026-01-28 04:58:04,756 | INFO     | will attempt to kill all subprocesses of pid=3480600
[2026-01-27 23:58:54] 2026-01-28 04:58:05,716 | INFO     | process IDs to be killed: [3480600] (in reverse order)
[2026-01-27 23:58:54] 2026-01-28 04:58:06,092 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 23:58:54] 2026-01-28 04:58:06,092 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 23:58:54] 2026-01-28 04:58:06,152 | INFO     | did not find any defunct processes belonging to 3480600
[2026-01-27 23:58:54] 2026-01-28 04:58:06,198 | INFO     | did not find any defunct processes belonging to 3480600
[2026-01-27 23:58:54] 2026-01-28 04:58:06,198 | INFO     | ready for new job
[2026-01-27 23:58:54] 2026-01-28 04:58:06,198 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 23:58:54] 2026-01-28 04:58:06,211 | INFO     | **************************************
[2026-01-27 23:58:54] 2026-01-28 04:58:06,211 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 23:58:54] 2026-01-28 04:58:06,211 | INFO     | **************************************
[2026-01-27 23:58:54] 2026-01-28 04:58:06,211 | INFO     | 
[2026-01-27 23:58:54] 2026-01-28 04:58:06,219 | INFO     | architecture information:
[2026-01-27 23:58:54] 2026-01-28 04:58:06,232 | INFO     | executing command: cat /etc/os-release
[2026-01-27 23:58:54] 2026-01-28 04:58:06,358 | INFO     | cat /etc/os-release:
[2026-01-27 23:58:54] NAME="CentOS Linux"
[2026-01-27 23:58:54] VERSION="7 (Core)"
[2026-01-27 23:58:54] ID="centos"
[2026-01-27 23:58:54] ID_LIKE="rhel fedora"
[2026-01-27 23:58:54] VERSION_ID="7"
[2026-01-27 23:58:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 23:58:54] ANSI_COLOR="0;31"
[2026-01-27 23:58:54] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 23:58:54] HOME_URL="https://www.centos.org/"
[2026-01-27 23:58:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 23:58:54] 
[2026-01-27 23:58:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 23:58:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 23:58:54] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 23:58:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 23:58:54] 
[2026-01-27 23:58:54] 2026-01-28 04:58:06,358 | INFO     | **************************************
[2026-01-27 23:58:54] 2026-01-28 04:58:06,861 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-27 23:58:54] 2026-01-28 04:58:06,970 | INFO     | sufficient remaining disk space (74746691584 B)
[2026-01-27 23:58:54] 2026-01-28 04:58:06,971 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 23:58:54] 2026-01-28 04:58:06,971 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 23:58:54] 2026-01-28 04:58:06,971 | INFO     | update_server=False
[2026-01-27 23:58:54] 2026-01-28 04:58:06,971 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 23:58:54] 2026-01-28 04:58:06,972 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 23:58:54] 2026-01-28 04:58:06,973 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 23:58:54] 2026-01-28 04:58:06,973 | INFO     | aborting loop
[2026-01-27 23:58:54] 2026-01-28 04:58:07,618 | INFO     | all data control threads have been joined
[2026-01-27 23:58:54] 2026-01-28 04:58:07,978 | INFO     | [job] job monitor thread has finished
[2026-01-27 23:58:54] 2026-01-28 04:58:07,980 | INFO     | [job] retrieve thread has finished
[2026-01-27 23:58:54] 2026-01-28 04:58:08,026 | INFO     | all payload control threads have been joined
[2026-01-27 23:58:54] 2026-01-28 04:58:08,199 | INFO     | all job control threads have been joined
[2026-01-27 23:58:54] 2026-01-28 04:58:08,277 | INFO     | [payload] failed_post thread has finished
[2026-01-27 23:58:54] 2026-01-28 04:58:08,368 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 23:58:54] 2026-01-28 04:58:08,516 | INFO     | [data] copytool_in thread has finished
[2026-01-27 23:58:54] 2026-01-28 04:58:08,624 | INFO     | [data] control thread has finished
[2026-01-27 23:58:54] 2026-01-28 04:58:08,723 | INFO     | [job] validate thread has finished
[2026-01-27 23:58:54] 2026-01-28 04:58:08,734 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 23:58:54] 2026-01-28 04:58:08,770 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 23:58:54] 2026-01-28 04:58:08,770 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 23:58:54] 2026-01-28 04:58:08,965 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 23:58:54] 2026-01-28 04:58:08,988 | INFO     | [data] copytool_out thread has finished
[2026-01-27 23:58:54] 2026-01-28 04:58:09,032 | INFO     | [payload] control thread has finished
[2026-01-27 23:58:54] 2026-01-28 04:58:09,054 | INFO     | [payload] validate_post thread has finished
[2026-01-27 23:58:54] 2026-01-28 04:58:09,205 | INFO     | [job] control thread has finished
[2026-01-27 23:58:54] 2026-01-28 04:58:09,447 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 23:58:54] 2026-01-28 04:58:09,740 | INFO     | [job] queue monitor thread has finished
[2026-01-27 23:58:54] 2026-01-28 04:58:13,464 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 23:58:54] 2026-01-28 04:58:37,777 | INFO     | PID=3444348 has CPU usage=10.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-27 23:58:54] 2026-01-28 04:58:37,777 | INFO     | .. there are 64 such processes running
[2026-01-27 23:58:54] 2026-01-28 04:58:37,777 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 23:58:54] 2026-01-28 04:58:37,777 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 23:58:54] 2026-01-28 04:58:37,777 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 23:58:54] 2026-01-28 04:58:46,322 | INFO     | [monitor] cgroup control has ended
[2026-01-27 23:58:54] 2026-01-28 04:58:47,664 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140080143787840)>', '<ExcThread(monitor, started 140079796307712)>']
[2026-01-27 23:58:54] 2026-01-28 04:58:47,840 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 23:58:54] 2026-01-28 04:58:47,840 | INFO     | [monitor] control thread has ended
[2026-01-27 23:58:54] 2026-01-28 04:58:52,690 | INFO     | all workflow threads have been joined
[2026-01-27 23:58:54] 2026-01-28 04:58:52,690 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 23:58:54] 2026-01-28 04:58:52,690 | INFO     | traces error code: 0
[2026-01-27 23:58:54] 2026-01-28 04:58:52,690 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 23:58:54] 2026-01-28 04:58:53,040 [wrapper] ==== pilot stdout END ====
[2026-01-27 23:58:54] 2026-01-28 04:58:53,081 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 23:58:54] 2026-01-28 04:58:53,128 [wrapper] pilotpid: 3444348
[2026-01-27 23:58:54] 2026-01-28 04:58:53,134 [wrapper] Pilot exit status: 0
[2026-01-27 23:58:54] 2026-01-28 04:58:53,231 [wrapper] pandaids: 6976468789
[2026-01-27 23:58:54] 2026-01-28 04:58:53,604 [wrapper] cleanup supervisor_pilot 1848455 3444349
[2026-01-27 23:58:54] 2026-01-28 04:58:53,609 [wrapper] Test setup, not cleaning
[2026-01-27 23:58:54] 2026-01-28 04:58:53,620 [wrapper] apfmon messages muted
[2026-01-27 23:58:54] 2026-01-28 04:58:53,637 [wrapper] ==== wrapper stdout END ====
[2026-01-27 23:58:54] 2026-01-28 04:58:53,656 [wrapper] ==== wrapper stderr END ====
[2026-01-27 23:58:54]  *** Error codes and diagnostics ***
[2026-01-27 23:58:54]     "exeErrorCode": 0,
[2026-01-27 23:58:54]     "exeErrorDiag": "",
[2026-01-27 23:58:54]     "pilotErrorCode": 0,
[2026-01-27 23:58:54]     "pilotErrorDiag": "",
[2026-01-27 23:58:54]  *** Listing of results directory ***
[2026-01-27 23:58:54] total 771440
[2026-01-27 23:58:54] -rw-r--r--. 1 boincer umatlas    584422 Jan 20 09:43 pilot3.tar.gz
[2026-01-27 23:58:54] -rw-r--r--. 1 boincer umatlas      5111 Jan 20 09:54 queuedata.json
[2026-01-27 23:58:54] -rwx------. 1 boincer umatlas     36322 Jan 20 09:54 runpilot2-wrapper.sh
[2026-01-27 23:58:54] -rw-r--r--. 1 boincer umatlas       100 Jan 27 10:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 23:58:54] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 27 10:01 run_atlas
[2026-01-27 23:58:54] -rw-r--r--. 1 boincer umatlas       105 Jan 27 10:01 job.xml
[2026-01-27 23:58:54] -rw-r--r--. 2 boincer umatlas 413488439 Jan 27 10:01 EVNT.47961981._000063.pool.root.1
[2026-01-27 23:58:54] -rw-r--r--. 2 boincer umatlas     15845 Jan 27 10:01 start_atlas.sh
[2026-01-27 23:58:54] drwxrwx--x. 2 boincer umatlas      4096 Jan 27 10:01 shared
[2026-01-27 23:58:54] -rw-r--r--. 2 boincer umatlas    597957 Jan 27 10:01 input.tar.gz
[2026-01-27 23:58:54] -rw-r--r--. 1 boincer umatlas         0 Jan 27 10:01 boinc_lockfile
[2026-01-27 23:58:54] -rw-r--r--. 1 boincer umatlas      2876 Jan 27 10:01 pandaJob.out
[2026-01-27 23:58:54] -rw-------. 1 boincer umatlas        57 Jan 27 10:01 setup.sh.local
[2026-01-27 23:58:54] -rw-------. 1 boincer umatlas   1004450 Jan 27 10:02 agis_schedconf.cvmfs.json
[2026-01-27 23:58:54] -rw-------. 1 boincer umatlas       439 Jan 27 10:03 workernode_map.json
[2026-01-27 23:58:54] drwx------. 5 boincer umatlas      4096 Jan 27 10:03 pilot3
[2026-01-27 23:58:54] -rw-r--r--. 1 boincer umatlas       533 Jan 27 23:39 boinc_task_state.xml
[2026-01-27 23:58:54] -rw-------. 1 boincer umatlas 356906674 Jan 27 23:57 HITS.47961985._001088.pool.root.1
[2026-01-27 23:58:54] -rw-------. 1 boincer umatlas        95 Jan 27 23:57 pilot_heartbeat.json
[2026-01-27 23:58:54] -rw-------. 1 boincer umatlas      1055 Jan 27 23:57 memory_monitor_summary.json
[2026-01-27 23:58:54] -rw-------. 1 boincer umatlas   1516246 Jan 27 23:58 agis_ddmendpoints.agis.ALL.json
[2026-01-27 23:58:54] -rw-------. 1 boincer umatlas   1904641 Jan 27 23:58 log.47961985._001088.job.log.tgz.1
[2026-01-27 23:58:54] -rw-------. 1 boincer umatlas      6944 Jan 27 23:58 heartbeat.json
[2026-01-27 23:58:54] -rw-r--r--. 1 boincer umatlas      6842 Jan 27 23:58 init_data.xml
[2026-01-27 23:58:54] -rw-------. 1 boincer umatlas      4821 Jan 27 23:58 pilotlog.txt
[2026-01-27 23:58:54] -rw-r--r--. 1 boincer umatlas        29 Jan 27 23:58 wrapper_checkpoint.txt
[2026-01-27 23:58:54] -rw-r--r--. 1 boincer umatlas      8192 Jan 27 23:58 boinc_mmap_file
[2026-01-27 23:58:54] -rw-------. 1 boincer umatlas   5903754 Jan 27 23:58 log.47961985._001088.job.log.1
[2026-01-27 23:58:54] -rw-------. 1 boincer umatlas       353 Jan 27 23:58 output.list
[2026-01-27 23:58:54] -rw-r--r--. 1 boincer umatlas       620 Jan 27 23:58 runtime_log
[2026-01-27 23:58:54] -rw-------. 1 boincer umatlas   7823360 Jan 27 23:58 result.tar.gz
[2026-01-27 23:58:54] -rw-------. 1 boincer umatlas       658 Jan 27 23:58 yeiNDmHJS28nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmKTvKDmKGVzyn.diag
[2026-01-27 23:58:54] -rw-r--r--. 1 boincer umatlas      9332 Jan 27 23:58 runtime_log.err
[2026-01-27 23:58:54] -rw-r--r--. 1 boincer umatlas     21181 Jan 27 23:58 stderr.txt
[2026-01-27 23:58:54] HITS file was successfully produced:
[2026-01-27 23:58:54] -rw-------. 1 boincer umatlas 356906674 Jan 27 23:57 shared/HITS.pool.root.1
[2026-01-27 23:58:54]  *** Contents of shared directory: ***
[2026-01-27 23:58:54] total 760588
[2026-01-27 23:58:54] -rw-r--r--. 2 boincer umatlas 413488439 Jan 27 10:01 ATLAS.root_0
[2026-01-27 23:58:54] -rw-r--r--. 2 boincer umatlas     15845 Jan 27 10:01 start_atlas.sh
[2026-01-27 23:58:54] -rw-r--r--. 2 boincer umatlas    597957 Jan 27 10:01 input.tar.gz
[2026-01-27 23:58:54] -rw-------. 1 boincer umatlas 356906674 Jan 27 23:57 HITS.pool.root.1
[2026-01-27 23:58:54] -rw-------. 1 boincer umatlas   7823360 Jan 27 23:58 result.tar.gz
23:58:56 (3426421): run_atlas exited; CPU time 118260.421212
23:58:56 (3426421): called boinc_finish(0)

</stderr_txt>
]]>

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