Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:30:12 (27428): wrapper (7.7.26015): starting
19:30:12 (27428): wrapper: running run_atlas (--nthreads 8)
[2026-01-27 19:30:12] Arguments: --nthreads 8
[2026-01-27 19:30:12] Threads: 8
[2026-01-27 19:30:12] Checking for CVMFS
[2026-01-27 19:30:13] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-27 19:30:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-27 19:30:13] Running cvmfs_config stat atlas.cern.ch
[2026-01-27 19:30:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-27 19:30:15] 2.11.2.0 18409 61696 130892 155595 3 55 15102161 25165824 899 130560 0 21388104 99.807 17547348 2630 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-27 19:30:15] CVMFS is ok
[2026-01-27 19:30:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-27 19:30:15] Checking for apptainer binary...
[2026-01-27 19:30:15] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-27 19:30:15] Running /usr/bin/apptainer --version
[2026-01-27 19:30:15] apptainer version 1.3.2-1.el7
[2026-01-27 19:30:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-27 19:30:30] cg-vwn403.simple-grid.lan
[2026-01-27 19:30:30] apptainer works
[2026-01-27 19:30:30] Set ATHENA_PROC_NUMBER=8
[2026-01-27 19:30:30] Set ATHENA_CORE_NUMBER=8
[2026-01-27 19:30:31] Starting ATLAS job with PandaID=6984062570
[2026-01-27 19:30:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 23:55:58]  *** The last 200 lines of the pilot log: ***
[2026-01-27 23:55:58] 2026-01-27 22:54:52,593 | INFO     | total number of processed events: 400 (read)
[2026-01-27 23:55:58] 2026-01-27 22:54:52,595 | INFO     | using path: /var/lib/boinc/slots/9/PanDA_Pilot-6984062570/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 23:55:58] 2026-01-27 22:54:52,595 | INFO     | extracted standard info from prmon json
[2026-01-27 23:55:58] 2026-01-27 22:54:52,595 | INFO     | extracted standard memory fields from prmon json
[2026-01-27 23:55:58] 2026-01-27 22:54:52,595 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-27 23:55:58] 2026-01-27 22:54:52,596 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-27 23:55:58] 2026-01-27 22:54:52,596 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-27 23:55:58] 2026-01-27 22:54:52,601 | INFO     | fitting pss+swap vs Time
[2026-01-27 23:55:58] 2026-01-27 22:54:52,601 | INFO     | sum of square deviations: 4844974562.5
[2026-01-27 23:55:58] 2026-01-27 22:54:52,603 | INFO     | sum of deviations: 148588910122.49997
[2026-01-27 23:55:58] 2026-01-27 22:54:52,603 | INFO     | mean x: 1769546868.5
[2026-01-27 23:55:58] 2026-01-27 22:54:52,603 | INFO     | mean y: 2410213.468
[2026-01-27 23:55:58] 2026-01-27 22:54:52,604 | INFO     | intersect: -54267232941.360794
[2026-01-27 23:55:58] 2026-01-27 22:54:52,604 | INFO     | chi2: 9.096020673910697
[2026-01-27 23:55:58] 2026-01-27 22:54:52,604 | INFO     | sum of square deviations: 4560048290.0
[2026-01-27 23:55:58] 2026-01-27 22:54:52,607 | INFO     | sum of deviations: 161790231924.0
[2026-01-27 23:55:58] 2026-01-27 22:54:52,607 | INFO     | mean x: 1769546716.0
[2026-01-27 23:55:58] 2026-01-27 22:54:52,607 | INFO     | mean y: 2417135.8163265307
[2026-01-27 23:55:58] 2026-01-27 22:54:52,607 | INFO     | intersect: -62780991147.34301
[2026-01-27 23:55:58] 2026-01-27 22:54:52,607 | INFO     | chi2: 8.398716821511158
[2026-01-27 23:55:58] 2026-01-27 22:54:52,607 | INFO     | current chi2=8.398716821511158 (change=7.666031964939937 %)
[2026-01-27 23:55:58] 2026-01-27 22:54:52,607 | INFO     | right removable region: 244
[2026-01-27 23:55:58] 2026-01-27 22:54:52,608 | INFO     | sum of square deviations: 4560048290.0
[2026-01-27 23:55:58] 2026-01-27 22:54:52,610 | INFO     | sum of deviations: 61813076136.99999
[2026-01-27 23:55:58] 2026-01-27 22:54:52,610 | INFO     | mean x: 1769547021.0
[2026-01-27 23:55:58] 2026-01-27 22:54:52,610 | INFO     | mean y: 2456632.669387755
[2026-01-27 23:55:58] 2026-01-27 22:54:52,610 | INFO     | intersect: -23984382492.90367
[2026-01-27 23:55:58] 2026-01-27 22:54:52,611 | INFO     | chi2: 3.9722227538053994
[2026-01-27 23:55:58] 2026-01-27 22:54:52,611 | INFO     | current chi2=3.9722227538053994 (change=56.33010416083848 %)
[2026-01-27 23:55:58] 2026-01-27 22:54:52,611 | INFO     | sum of square deviations: 4286517580.0
[2026-01-27 23:55:58] 2026-01-27 22:54:52,613 | INFO     | sum of deviations: -7063755561.5
[2026-01-27 23:55:58] 2026-01-27 22:54:52,613 | INFO     | mean x: 1769547173.5
[2026-01-27 23:55:58] 2026-01-27 22:54:52,614 | INFO     | mean y: 2495010.220833333
[2026-01-27 23:55:58] 2026-01-27 22:54:52,614 | INFO     | intersect: 2918533135.5438213
[2026-01-27 23:55:58] 2026-01-27 22:54:52,614 | INFO     | chi2: 1.0134322728136391
[2026-01-27 23:55:58] 2026-01-27 22:54:52,614 | INFO     | current chi2=1.0134322728136391 (change=74.48702311966849 %)
[2026-01-27 23:55:58] 2026-01-27 22:54:52,615 | INFO     | sum of square deviations: 4024149870.0
[2026-01-27 23:55:58] 2026-01-27 22:54:52,617 | INFO     | sum of deviations: -19401788831.999996
[2026-01-27 23:55:58] 2026-01-27 22:54:52,617 | INFO     | mean x: 1769547326.0
[2026-01-27 23:55:58] 2026-01-27 22:54:52,617 | INFO     | mean y: 2502118.4978723405
[2026-01-27 23:55:58] 2026-01-27 22:54:52,617 | INFO     | intersect: 8534088827.837366
[2026-01-27 23:55:58] 2026-01-27 22:54:52,617 | INFO     | chi2: 0.860176722483243
[2026-01-27 23:55:58] 2026-01-27 22:54:52,617 | INFO     | current chi2=0.860176722483243 (change=15.122426475022909 %)
[2026-01-27 23:55:58] 2026-01-27 22:54:52,617 | INFO     | left removable region: 30
[2026-01-27 23:55:58] 2026-01-27 22:54:52,618 | INFO     | sum of square deviations: 3038856977.5
[2026-01-27 23:55:58] 2026-01-27 22:54:52,620 | INFO     | sum of deviations: 5719482152.499999
[2026-01-27 23:55:58] 2026-01-27 22:54:52,620 | INFO     | mean x: 1769547600.5
[2026-01-27 23:55:58] 2026-01-27 22:54:52,620 | INFO     | mean y: 2505304.144859813
[2026-01-27 23:55:58] 2026-01-27 22:54:52,620 | INFO     | intersect: -3327989021.1870236
[2026-01-27 23:55:58] 2026-01-27 22:54:52,620 | INFO     | chi2: 0.0014862307846735007
[2026-01-27 23:55:58] 2026-01-27 22:54:52,620 | INFO     | current memory leak: 1.88 B/s (using 214 data points, chi2=0.00)
[2026-01-27 23:55:58] 2026-01-27 22:54:52,621 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2026-01-27 23:55:58] 2026-01-27 22:54:52,621 | INFO     | ..............................
[2026-01-27 23:55:58] 2026-01-27 22:54:52,621 | INFO     | . Timing measurements:
[2026-01-27 23:55:58] 2026-01-27 22:54:52,621 | INFO     | . get job = 0 s
[2026-01-27 23:55:58] 2026-01-27 22:54:52,621 | INFO     | . initial setup = 115 s
[2026-01-27 23:55:58] 2026-01-27 22:54:52,621 | INFO     | . payload setup = 153 s
[2026-01-27 23:55:58] 2026-01-27 22:54:52,622 | INFO     | . stage-in = 0 s
[2026-01-27 23:55:58] 2026-01-27 22:54:52,622 | INFO     | . payload execution = 15343 s
[2026-01-27 23:55:58] 2026-01-27 22:54:52,622 | INFO     | . stage-out = 4 s
[2026-01-27 23:55:58] 2026-01-27 22:54:52,622 | INFO     | . log creation = 2 s
[2026-01-27 23:55:58] 2026-01-27 22:54:52,622 | INFO     | ..............................
[2026-01-27 23:55:58] 2026-01-27 22:54:52,884 | INFO     | 
[2026-01-27 23:55:58] 2026-01-27 22:54:52,884 | INFO     | job summary report
[2026-01-27 23:55:58] 2026-01-27 22:54:52,884 | INFO     | --------------------------------------------------
[2026-01-27 23:55:58] 2026-01-27 22:54:52,884 | INFO     | PanDA job id: 6984062570
[2026-01-27 23:55:58] 2026-01-27 22:54:52,884 | INFO     | task id: 48317931
[2026-01-27 23:55:58] 2026-01-27 22:54:52,884 | INFO     | errors: (none)
[2026-01-27 23:55:58] 2026-01-27 22:54:52,884 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-27 23:55:58] 2026-01-27 22:54:52,885 | INFO     | pilot state: finished 
[2026-01-27 23:55:58] 2026-01-27 22:54:52,885 | INFO     | transexitcode: 0
[2026-01-27 23:55:58] 2026-01-27 22:54:52,885 | INFO     | exeerrorcode: 0
[2026-01-27 23:55:58] 2026-01-27 22:54:52,885 | INFO     | exeerrordiag: 
[2026-01-27 23:55:58] 2026-01-27 22:54:52,885 | INFO     | exitcode: 0
[2026-01-27 23:55:58] 2026-01-27 22:54:52,885 | INFO     | exitmsg: OK
[2026-01-27 23:55:58] 2026-01-27 22:54:52,885 | INFO     | cpuconsumptiontime: 57184 s
[2026-01-27 23:55:58] 2026-01-27 22:54:52,885 | INFO     | nevents: 400
[2026-01-27 23:55:58] 2026-01-27 22:54:52,885 | INFO     | neventsw: 0
[2026-01-27 23:55:58] 2026-01-27 22:54:52,885 | INFO     | pid: 3443
[2026-01-27 23:55:58] 2026-01-27 22:54:52,886 | INFO     | pgrp: 3443
[2026-01-27 23:55:58] 2026-01-27 22:54:52,886 | INFO     | corecount: 8
[2026-01-27 23:55:58] 2026-01-27 22:54:52,886 | INFO     | event service: False
[2026-01-27 23:55:58] 2026-01-27 22:54:52,886 | INFO     | sizes: {0: 2283087, 1: 2284145, 2: 2284233, 15501: 2315384, 15506: 2324382, 15509: 2324438, 15510: 2324760}
[2026-01-27 23:55:58] 2026-01-27 22:54:52,886 | INFO     | --------------------------------------------------
[2026-01-27 23:55:58] 2026-01-27 22:54:52,886 | INFO     | 
[2026-01-27 23:55:58] 2026-01-27 22:54:52,886 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2026-01-27 23:55:58] 2026-01-27 22:54:52,893 | INFO     | PID=31390 has CPU usage=8.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-27 23:55:58] 2026-01-27 22:54:52,893 | INFO     | .. there are 2 such processes running
[2026-01-27 23:55:58] 2026-01-27 22:54:53,387 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-27 23:55:58] 2026-01-27 22:54:53,387 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-27 23:55:58] 2026-01-27 22:54:53,387 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-27 23:55:58] 2026-01-27 22:54:53,388 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-27 23:55:58] 2026-01-27 22:54:53,388 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-27 23:55:58] 2026-01-27 22:54:53,388 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-27 23:55:58] 2026-01-27 22:54:53,388 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-27 23:55:58] 2026-01-27 22:54:53,388 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-27 23:55:58] 2026-01-27 22:54:53,388 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-27 23:55:58] 2026-01-27 22:54:53,388 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-27 23:55:58] 2026-01-27 22:54:53,388 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-27 23:55:58] 2026-01-27 22:54:53,388 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-27 23:55:58] 2026-01-27 22:54:53,388 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-27 23:55:58] 2026-01-27 22:54:53,388 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-27 23:55:58] 2026-01-27 22:54:53,389 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-27 23:55:58] 2026-01-27 22:54:53,389 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-27 23:55:58] 2026-01-27 22:54:53,389 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-27 23:55:58] 2026-01-27 22:54:53,389 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-27 23:55:58] 2026-01-27 22:54:53,389 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-27 23:55:58] 2026-01-27 22:54:53,389 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-27 23:55:58] 2026-01-27 22:54:53,389 | INFO     | job 6984062570 has completed (purged errors)
[2026-01-27 23:55:58] 2026-01-27 22:54:53,389 | INFO     | overall cleanup function is called
[2026-01-27 23:55:58] 2026-01-27 22:54:54,398 | INFO     | --- collectZombieJob: --- 10, [3443]
[2026-01-27 23:55:58] 2026-01-27 22:54:54,398 | INFO     | zombie collector waiting for pid 3443
[2026-01-27 23:55:58] 2026-01-27 22:54:54,398 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 23:55:58] 2026-01-27 22:54:54,398 | INFO     | collected zombie processes
[2026-01-27 23:55:58] 2026-01-27 22:54:54,398 | INFO     | will attempt to kill all subprocesses of pid=3443
[2026-01-27 23:55:58] 2026-01-27 22:54:54,488 | INFO     | process IDs to be killed: [3443] (in reverse order)
[2026-01-27 23:55:58] 2026-01-27 22:54:55,476 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 23:55:58] 2026-01-27 22:54:55,477 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 23:55:58] 2026-01-27 22:54:55,479 | INFO     | did not find any defunct processes belonging to 3443
[2026-01-27 23:55:58] 2026-01-27 22:54:55,480 | INFO     | did not find any defunct processes belonging to 3443
[2026-01-27 23:55:58] 2026-01-27 22:54:55,480 | INFO     | ready for new job
[2026-01-27 23:55:58] 2026-01-27 22:54:55,481 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 23:55:58] 2026-01-27 22:54:55,482 | INFO     | **************************************
[2026-01-27 23:55:58] 2026-01-27 22:54:55,483 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 23:55:58] 2026-01-27 22:54:55,483 | INFO     | **************************************
[2026-01-27 23:55:58] 2026-01-27 22:54:55,483 | INFO     | 
[2026-01-27 23:55:58] 2026-01-27 22:54:55,483 | INFO     | pilot is running in a VM
[2026-01-27 23:55:58] 2026-01-27 22:54:55,483 | INFO     | architecture information:
[2026-01-27 23:55:58] 2026-01-27 22:54:55,492 | INFO     | executing command: cat /etc/os-release
[2026-01-27 23:55:58] 2026-01-27 22:54:55,806 | INFO     | cat /etc/os-release:
[2026-01-27 23:55:58] NAME="CentOS Linux"
[2026-01-27 23:55:58] VERSION="7 (Core)"
[2026-01-27 23:55:58] ID="centos"
[2026-01-27 23:55:58] ID_LIKE="rhel fedora"
[2026-01-27 23:55:58] VERSION_ID="7"
[2026-01-27 23:55:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 23:55:58] ANSI_COLOR="0;31"
[2026-01-27 23:55:58] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 23:55:58] HOME_URL="https://www.centos.org/"
[2026-01-27 23:55:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 23:55:58] 
[2026-01-27 23:55:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 23:55:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 23:55:58] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 23:55:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 23:55:58] 
[2026-01-27 23:55:58] 2026-01-27 22:54:55,806 | INFO     | **************************************
[2026-01-27 23:55:58] 2026-01-27 22:54:56,310 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2026-01-27 23:55:58] 2026-01-27 22:54:56,491 | INFO     | sufficient remaining disk space (497162387456 B)
[2026-01-27 23:55:58] 2026-01-27 22:54:56,492 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 23:55:58] 2026-01-27 22:54:56,492 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 23:55:58] 2026-01-27 22:54:56,492 | INFO     | update_server=False
[2026-01-27 23:55:58] 2026-01-27 22:54:56,492 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 23:55:58] 2026-01-27 22:54:57,025 | INFO     | all payload control threads have been joined
[2026-01-27 23:55:58] 2026-01-27 22:54:57,122 | INFO     | all job control threads have been joined
[2026-01-27 23:55:58] 2026-01-27 22:54:57,287 | INFO     | all data control threads have been joined
[2026-01-27 23:55:58] 2026-01-27 22:54:57,379 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 23:55:58] 2026-01-27 22:54:57,379 | INFO     | aborting loop
[2026-01-27 23:55:58] 2026-01-27 22:54:57,498 | INFO     | [job] retrieve thread has finished
[2026-01-27 23:55:58] 2026-01-27 22:54:57,602 | INFO     | [data] copytool_in thread has finished
[2026-01-27 23:55:58] 2026-01-27 22:54:57,648 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 23:55:58] 2026-01-27 22:54:57,699 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 23:55:58] 2026-01-27 22:54:57,898 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 23:55:58] 2026-01-27 22:54:58,031 | INFO     | [payload] control thread has finished
[2026-01-27 23:55:58] 2026-01-27 22:54:58,128 | INFO     | [job] control thread has finished
[2026-01-27 23:55:58] 2026-01-27 22:54:58,249 | INFO     | [payload] validate_post thread has finished
[2026-01-27 23:55:58] 2026-01-27 22:54:58,293 | INFO     | [data] control thread has finished
[2026-01-27 23:55:58] 2026-01-27 22:54:58,317 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 23:55:58] 2026-01-27 22:54:58,385 | INFO     | [job] job monitor thread has finished
[2026-01-27 23:55:58] 2026-01-27 22:54:58,508 | INFO     | [payload] failed_post thread has finished
[2026-01-27 23:55:58] 2026-01-27 22:54:58,856 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 23:55:58] 2026-01-27 22:54:58,894 | INFO     | [job] validate thread has finished
[2026-01-27 23:55:58] 2026-01-27 22:54:58,904 | INFO     | [job] queue monitor thread has finished
[2026-01-27 23:55:58] 2026-01-27 22:54:58,927 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 23:55:58] 2026-01-27 22:54:58,947 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 23:55:58] 2026-01-27 22:54:59,655 | INFO     | [data] copytool_out thread has finished
[2026-01-27 23:55:58] 2026-01-27 22:55:02,326 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 23:55:58] 2026-01-27 22:55:25,002 | INFO     | PID=31390 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-27 23:55:58] 2026-01-27 22:55:25,002 | INFO     | .. there are 2 such processes running
[2026-01-27 23:55:58] 2026-01-27 22:55:25,002 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 23:55:58] 2026-01-27 22:55:25,002 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 23:55:58] 2026-01-27 22:55:25,002 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 23:55:58] 2026-01-27 22:55:46,599 | INFO     | [monitor] cgroup control has ended
[2026-01-27 23:55:58] 2026-01-27 22:55:47,221 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140357817972544)>', '<ExcThread(monitor, started 140357232744192)>']
[2026-01-27 23:55:58] 2026-01-27 22:55:48,141 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 23:55:58] 2026-01-27 22:55:48,141 | INFO     | [monitor] control thread has ended
[2026-01-27 23:55:58] 2026-01-27 22:55:52,247 | INFO     | all workflow threads have been joined
[2026-01-27 23:55:58] 2026-01-27 22:55:52,247 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 23:55:58] 2026-01-27 22:55:52,247 | INFO     | traces error code: 0
[2026-01-27 23:55:58] 2026-01-27 22:55:52,247 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 23:55:58] 2026-01-27 22:55:52,720 [wrapper] ==== pilot stdout END ====
[2026-01-27 23:55:58] 2026-01-27 22:55:52,819 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 23:55:58] 2026-01-27 22:55:52,968 [wrapper] pilotpid: 31390
[2026-01-27 23:55:58] 2026-01-27 22:55:53,094 [wrapper] Pilot exit status: 0
[2026-01-27 23:55:58] 2026-01-27 22:55:53,579 [wrapper] pandaids: 6984062570
[2026-01-27 23:55:58] 2026-01-27 22:55:54,717 [wrapper] cleanup supervisor_pilot  9365 31391
[2026-01-27 23:55:58] 2026-01-27 22:55:54,844 [wrapper] Test setup, not cleaning
[2026-01-27 23:55:58] 2026-01-27 22:55:54,934 [wrapper] apfmon messages muted
[2026-01-27 23:55:58] 2026-01-27 22:55:55,006 [wrapper] ==== wrapper stdout END ====
[2026-01-27 23:55:58] 2026-01-27 22:55:55,074 [wrapper] ==== wrapper stderr END ====
[2026-01-27 23:55:58]  *** Error codes and diagnostics ***
[2026-01-27 23:55:58]     "exeErrorCode": 0,
[2026-01-27 23:55:58]     "exeErrorDiag": "",
[2026-01-27 23:55:58]     "pilotErrorCode": 0,
[2026-01-27 23:55:58]     "pilotErrorDiag": "",
[2026-01-27 23:55:58]  *** Listing of results directory ***
[2026-01-27 23:55:58] total 681240
[2026-01-27 23:55:58] -rw-r--r--. 1 boinc boinc    584422 Jan 26 08:37 pilot3.tar.gz
[2026-01-27 23:55:58] -rwx------. 1 boinc boinc     36322 Jan 26 08:41 runpilot2-wrapper.sh
[2026-01-27 23:55:58] -rw-r--r--. 1 boinc boinc      5111 Jan 26 08:43 queuedata.json
[2026-01-27 23:55:58] -rw-r--r--. 1 boinc boinc       100 Jan 27 19:30 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 23:55:58] -rwxr-xr-x. 1 boinc boinc      7986 Jan 27 19:30 run_atlas
[2026-01-27 23:55:58] -rw-r--r--. 1 boinc boinc       105 Jan 27 19:30 job.xml
[2026-01-27 23:55:58] -rw-r--r--. 2 boinc boinc 499195465 Jan 27 19:30 EVNT.48317929._000058.pool.root.1
[2026-01-27 23:55:58] -rw-r--r--. 1 boinc boinc      6391 Jan 27 19:30 init_data.xml
[2026-01-27 23:55:58] -rw-r--r--. 2 boinc boinc     15845 Jan 27 19:30 start_atlas.sh
[2026-01-27 23:55:58] drwxrwx--x. 2 boinc boinc        68 Jan 27 19:30 shared
[2026-01-27 23:55:58] -rw-r--r--. 2 boinc boinc    597757 Jan 27 19:30 input.tar.gz
[2026-01-27 23:55:58] -rw-r--r--. 1 boinc boinc         0 Jan 27 19:30 boinc_lockfile
[2026-01-27 23:55:58] -rw-r--r--. 1 boinc boinc      2509 Jan 27 19:30 pandaJob.out
[2026-01-27 23:55:58] -rw-------. 1 boinc boinc       415 Jan 27 19:36 workernode_map.json
[2026-01-27 23:55:58] -rw-------. 1 boinc boinc   1005244 Jan 27 19:36 agis_schedconf.cvmfs.json
[2026-01-27 23:55:58] drwx------. 5 boinc boinc      4096 Jan 27 19:36 pilot3
[2026-01-27 23:55:58] -rw-------. 1 boinc boinc 189081868 Jan 27 23:53 HITS.48317931._001677.pool.root.1
[2026-01-27 23:55:58] -rw-r--r--. 1 boinc boinc       532 Jan 27 23:53 boinc_task_state.xml
[2026-01-27 23:55:58] -rw-------. 1 boinc boinc        95 Jan 27 23:54 pilot_heartbeat.json
[2026-01-27 23:55:58] -rw-------. 1 boinc boinc      1007 Jan 27 23:54 memory_monitor_summary.json
[2026-01-27 23:55:58] -rw-------. 1 boinc boinc   1516246 Jan 27 23:54 agis_ddmendpoints.agis.ALL.json
[2026-01-27 23:55:58] -rw-------. 1 boinc boinc    503659 Jan 27 23:54 log.48317931._001677.job.log.tgz.1
[2026-01-27 23:55:58] -rw-------. 1 boinc boinc      6329 Jan 27 23:54 heartbeat.json
[2026-01-27 23:55:58] -rw-r--r--. 1 boinc boinc      8192 Jan 27 23:55 boinc_mmap_file
[2026-01-27 23:55:58] -rw-r--r--. 1 boinc boinc        28 Jan 27 23:55 wrapper_checkpoint.txt
[2026-01-27 23:55:58] -rw-------. 1 boinc boinc      4880 Jan 27 23:55 pilotlog.txt
[2026-01-27 23:55:58] -rw-------. 1 boinc boinc   2189256 Jan 27 23:55 log.48317931._001677.job.log.1
[2026-01-27 23:55:58] -rw-------. 1 boinc boinc       357 Jan 27 23:55 output.list
[2026-01-27 23:55:58] -rw-r--r--. 1 boinc boinc       620 Jan 27 23:55 runtime_log
[2026-01-27 23:55:58] -rw-------. 1 boinc boinc   2713600 Jan 27 23:55 result.tar.gz
[2026-01-27 23:55:58] -rw-r--r--. 1 boinc boinc      8816 Jan 27 23:55 runtime_log.err
[2026-01-27 23:55:58] -rw-------. 1 boinc boinc       655 Jan 27 23:55 8KyLDmoOW48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmcU9KDmaZ0NGo.diag
[2026-01-27 23:55:58] -rw-r--r--. 1 boinc boinc     20785 Jan 27 23:55 stderr.txt
[2026-01-27 23:55:58] HITS file was successfully produced:
[2026-01-27 23:55:58] -rw-------. 1 boinc boinc 189081868 Jan 27 23:53 shared/HITS.pool.root.1
[2026-01-27 23:55:58]  *** Contents of shared directory: ***
[2026-01-27 23:55:58] total 675400
[2026-01-27 23:55:58] -rw-r--r--. 2 boinc boinc 499195465 Jan 27 19:30 ATLAS.root_0
[2026-01-27 23:55:58] -rw-r--r--. 2 boinc boinc     15845 Jan 27 19:30 start_atlas.sh
[2026-01-27 23:55:58] -rw-r--r--. 2 boinc boinc    597757 Jan 27 19:30 input.tar.gz
[2026-01-27 23:55:58] -rw-------. 1 boinc boinc 189081868 Jan 27 23:53 HITS.pool.root.1
[2026-01-27 23:55:58] -rw-------. 1 boinc boinc   2713600 Jan 27 23:55 result.tar.gz
23:55:59 (27428): run_atlas exited; CPU time 57335.836394
23:55:59 (27428): called boinc_finish(0)

</stderr_txt>
]]>

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