Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
01:17:23 (1674295): wrapper (7.7.26015): starting
01:17:23 (1674295): wrapper: running run_atlas (--nthreads 12)
[2026-01-28 01:17:23] Arguments: --nthreads 12
[2026-01-28 01:17:23] Threads: 12
[2026-01-28 01:17:23] Checking for CVMFS
[2026-01-28 01:17:23] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-28 01:17:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-28 01:17:23] Running cvmfs_config stat atlas.cern.ch
[2026-01-28 01:17:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-28 01:17:23] 2.13.1.0 2787 3462 72980 155606 3 182 2945649 4096001 1284 130560 0 4955934 99.959 358327 1149 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2026-01-28 01:17:23] CVMFS is ok
[2026-01-28 01:17:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-28 01:17:23] Checking for apptainer binary...
[2026-01-28 01:17:23] apptainer is not installed, using version from CVMFS
[2026-01-28 01:17:23] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-28 01:17:23] ryzen7
[2026-01-28 01:17:23] apptainer works
[2026-01-28 01:17:23] Set ATHENA_PROC_NUMBER=12
[2026-01-28 01:17:23] Set ATHENA_CORE_NUMBER=12
[2026-01-28 01:17:23] Starting ATLAS job with PandaID=6984225345
[2026-01-28 01:17:23] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-28 02:30:43]  *** The last 200 lines of the pilot log: ***
[2026-01-28 02:30:43]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-01-28 02:30:43]  is_altstaged=None
[2026-01-28 02:30:43]  is_tar=False
[2026-01-28 02:30:43]  lfn=log.48310826._010539.job.log.tgz.1
[2026-01-28 02:30:43]  mtime=0
[2026-01-28 02:30:43]  protocol_id=None
[2026-01-28 02:30:43]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-28 02:30:43]  replicas=None
[2026-01-28 02:30:43]  scope=mc23_13p6TeV
[2026-01-28 02:30:43]  status=None
[2026-01-28 02:30:43]  status_code=0
[2026-01-28 02:30:43]  storage_token=
[2026-01-28 02:30:43]  surl=/opt/boinc/instance_homes/boinc_31417/slots/1/PanDA_Pilot-6984225345/log.48310826._010539.job.log.tgz.1
[2026-01-28 02:30:43]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0f/02/log.48310826._010539.job.log.tgz.1
[2026-01-28 02:30:43]  workdir=None
[2026-01-28 02:30:43] ]
[2026-01-28 02:30:43] 2026-01-28 02:29:33,638 | INFO     | transferring file log.48310826._010539.job.log.tgz.1 from /opt/boinc/instance_homes/boinc_31417/slots/1/PanDA_Pilot-6984225345/log.48310826._010539.job.log.tgz.1 t
[2026-01-28 02:30:43] 2026-01-28 02:29:33,638 | INFO     | executing command: /usr/bin/env mv /opt/boinc/instance_homes/boinc_31417/slots/1/PanDA_Pilot-6984225345/log.48310826._010539.job.log.tgz.1 /opt/boinc/instance_home
[2026-01-28 02:30:43] 2026-01-28 02:29:33,762 | INFO     | adding to output.list: log.48310826._010539.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0f/02/log.48310826._010539.job.log.tg
[2026-01-28 02:30:43] 2026-01-28 02:29:33,762 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-28 02:30:43] 2026-01-28 02:29:33,762 | INFO     | summary of transferred files:
[2026-01-28 02:30:43] 2026-01-28 02:29:33,762 | INFO     |  -- lfn=log.48310826._010539.job.log.tgz.1, status_code=0, status=transferred
[2026-01-28 02:30:43] 2026-01-28 02:29:33,763 | INFO     | stage-out finished correctly
[2026-01-28 02:30:43] 2026-01-28 02:29:33,886 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-28 02:30:43] 2026-01-28 02:29:34,409 | INFO     | PID=1678135 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-28 02:30:43] 2026-01-28 02:29:34,409 | INFO     | .. there are 3 such processes running
[2026-01-28 02:30:43] 2026-01-28 02:29:34,746 | INFO     | monitor loop #328: job 0:6984225345 is in state 'finished'
[2026-01-28 02:30:43] 2026-01-28 02:29:34,746 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-28 02:30:43] 2026-01-28 02:29:34,954 | INFO     | job 6984225345 has state=finished
[2026-01-28 02:30:43] 2026-01-28 02:29:34,954 | INFO     | preparing for final server update for job 6984225345 in state='finished'
[2026-01-28 02:30:43] 2026-01-28 02:29:34,954 | INFO     | reading metadata from: /opt/boinc/instance_homes/boinc_31417/slots/1/PanDA_Pilot-6984225345/jobReport.json
[2026-01-28 02:30:43] 2026-01-28 02:29:34,956 | INFO     | added worker_node to metadata from /opt/boinc/instance_homes/boinc_31417/slots/1/workernode_map.json
[2026-01-28 02:30:43] 2026-01-28 02:29:34,956 | INFO     | this job has now completed (state=finished)
[2026-01-28 02:30:43] 2026-01-28 02:29:34,956 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-28 02:30:43] 2026-01-28 02:29:34,956 | INFO     | log transfer has been attempted: DONE
[2026-01-28 02:30:43] 2026-01-28 02:29:34,956 | INFO     | job 6984225345 has finished - writing final server update
[2026-01-28 02:30:43] 2026-01-28 02:29:34,956 | INFO     | total number of processed events: 400 (read)
[2026-01-28 02:30:43] 2026-01-28 02:29:34,976 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/1/PanDA_Pilot-6984225345/memory_monitor_summary.json (trf name=prmon)
[2026-01-28 02:30:43] 2026-01-28 02:29:34,976 | INFO     | extracted standard info from prmon json
[2026-01-28 02:30:43] 2026-01-28 02:29:34,976 | INFO     | extracted standard memory fields from prmon json
[2026-01-28 02:30:43] 2026-01-28 02:29:34,976 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-28 02:30:43] 2026-01-28 02:29:34,982 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-28 02:30:43] 2026-01-28 02:29:34,982 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-28 02:30:43] 2026-01-28 02:29:34,983 | INFO     | fitting pss+swap vs Time
[2026-01-28 02:30:43] 2026-01-28 02:29:34,983 | INFO     | sum of square deviations: 81266640.0
[2026-01-28 02:30:43] 2026-01-28 02:29:34,983 | INFO     | sum of deviations: -2576778958.0
[2026-01-28 02:30:43] 2026-01-28 02:29:34,983 | INFO     | mean x: 1769565292.5
[2026-01-28 02:30:43] 2026-01-28 02:29:34,983 | INFO     | mean y: 2847838.8125
[2026-01-28 02:30:43] 2026-01-28 02:29:34,983 | INFO     | intersect: 56111708873.56323
[2026-01-28 02:30:43] 2026-01-28 02:29:34,983 | INFO     | chi2: 0.0317068531764254
[2026-01-28 02:30:43] 2026-01-28 02:29:34,983 | INFO     | current memory leak: -31.71 B/s (using 64 data points, chi2=0.03)
[2026-01-28 02:30:43] 2026-01-28 02:29:34,984 | INFO     | could have reported an average CPU frequency of 3434 MHz (6 samples)
[2026-01-28 02:30:43] 2026-01-28 02:29:34,984 | INFO     | ..............................
[2026-01-28 02:30:43] 2026-01-28 02:29:34,984 | INFO     | . Timing measurements:
[2026-01-28 02:30:43] 2026-01-28 02:29:34,984 | INFO     | . get job = 0 s
[2026-01-28 02:30:43] 2026-01-28 02:29:34,984 | INFO     | . initial setup = 3 s
[2026-01-28 02:30:43] 2026-01-28 02:29:34,984 | INFO     | . payload setup = 2 s
[2026-01-28 02:30:43] 2026-01-28 02:29:34,984 | INFO     | . stage-in = 0 s
[2026-01-28 02:30:43] 2026-01-28 02:29:34,984 | INFO     | . payload execution = 4303 s
[2026-01-28 02:30:43] 2026-01-28 02:29:34,984 | INFO     | . stage-out = 1 s
[2026-01-28 02:30:43] 2026-01-28 02:29:34,984 | INFO     | . log creation = 0 s
[2026-01-28 02:30:43] 2026-01-28 02:29:34,984 | INFO     | ..............................
[2026-01-28 02:30:43] 2026-01-28 02:29:35,102 | INFO     | 
[2026-01-28 02:30:43] 2026-01-28 02:29:35,102 | INFO     | job summary report
[2026-01-28 02:30:43] 2026-01-28 02:29:35,102 | INFO     | --------------------------------------------------
[2026-01-28 02:30:43] 2026-01-28 02:29:35,102 | INFO     | PanDA job id: 6984225345
[2026-01-28 02:30:43] 2026-01-28 02:29:35,102 | INFO     | task id: 48310826
[2026-01-28 02:30:43] 2026-01-28 02:29:35,102 | INFO     | errors: (none)
[2026-01-28 02:30:43] 2026-01-28 02:29:35,102 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-28 02:30:43] 2026-01-28 02:29:35,102 | INFO     | pilot state: finished 
[2026-01-28 02:30:43] 2026-01-28 02:29:35,102 | INFO     | transexitcode: 0
[2026-01-28 02:30:43] 2026-01-28 02:29:35,102 | INFO     | exeerrorcode: 0
[2026-01-28 02:30:43] 2026-01-28 02:29:35,102 | INFO     | exeerrordiag: 
[2026-01-28 02:30:43] 2026-01-28 02:29:35,102 | INFO     | exitcode: 0
[2026-01-28 02:30:43] 2026-01-28 02:29:35,102 | INFO     | exitmsg: OK
[2026-01-28 02:30:43] 2026-01-28 02:29:35,102 | INFO     | cpuconsumptiontime: 21690 s
[2026-01-28 02:30:43] 2026-01-28 02:29:35,102 | INFO     | nevents: 400
[2026-01-28 02:30:43] 2026-01-28 02:29:35,103 | INFO     | neventsw: 0
[2026-01-28 02:30:43] 2026-01-28 02:29:35,103 | INFO     | pid: 1682662
[2026-01-28 02:30:43] 2026-01-28 02:29:35,103 | INFO     | pgrp: 1682662
[2026-01-28 02:30:43] 2026-01-28 02:29:35,103 | INFO     | corecount: 12
[2026-01-28 02:30:43] 2026-01-28 02:29:35,103 | INFO     | event service: False
[2026-01-28 02:30:43] 2026-01-28 02:29:35,103 | INFO     | sizes: {0: 2284214, 10: 2284214, 4310: 2310379, 4311: 2310378, 4313: 2319478, 4314: 2319534, 4315: 2319856}
[2026-01-28 02:30:43] 2026-01-28 02:29:35,103 | INFO     | --------------------------------------------------
[2026-01-28 02:30:43] 2026-01-28 02:29:35,103 | INFO     | 
[2026-01-28 02:30:43] 2026-01-28 02:29:35,103 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/1
[2026-01-28 02:30:43] 2026-01-28 02:29:35,186 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-28 02:30:43] 2026-01-28 02:29:35,186 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-28 02:30:43] 2026-01-28 02:29:35,186 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-28 02:30:43] 2026-01-28 02:29:35,186 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-28 02:30:43] 2026-01-28 02:29:35,186 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-28 02:30:43] 2026-01-28 02:29:35,186 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-28 02:30:43] 2026-01-28 02:29:35,186 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-28 02:30:43] 2026-01-28 02:29:35,186 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-28 02:30:43] 2026-01-28 02:29:35,186 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-28 02:30:43] 2026-01-28 02:29:35,187 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-28 02:30:43] 2026-01-28 02:29:35,187 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-28 02:30:43] 2026-01-28 02:29:35,187 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-28 02:30:43] 2026-01-28 02:29:35,187 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-28 02:30:43] 2026-01-28 02:29:35,187 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-28 02:30:43] 2026-01-28 02:29:35,187 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-28 02:30:43] 2026-01-28 02:29:35,187 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-28 02:30:43] 2026-01-28 02:29:35,187 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-28 02:30:43] 2026-01-28 02:29:35,187 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-28 02:30:43] 2026-01-28 02:29:35,187 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-28 02:30:43] 2026-01-28 02:29:35,187 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-28 02:30:43] 2026-01-28 02:29:35,187 | INFO     | job 6984225345 has completed (purged errors)
[2026-01-28 02:30:43] 2026-01-28 02:29:35,187 | INFO     | overall cleanup function is called
[2026-01-28 02:30:43] 2026-01-28 02:29:36,198 | INFO     | --- collectZombieJob: --- 10, [1682662]
[2026-01-28 02:30:43] 2026-01-28 02:29:36,198 | INFO     | zombie collector waiting for pid 1682662
[2026-01-28 02:30:43] 2026-01-28 02:29:36,198 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-28 02:30:43] 2026-01-28 02:29:36,198 | INFO     | collected zombie processes
[2026-01-28 02:30:43] 2026-01-28 02:29:36,198 | INFO     | will attempt to kill all subprocesses of pid=1682662
[2026-01-28 02:30:43] 2026-01-28 02:29:36,328 | INFO     | process IDs to be killed: [1682662] (in reverse order)
[2026-01-28 02:30:43] 2026-01-28 02:29:36,402 | WARNING  | found no corresponding commands to process id(s)
[2026-01-28 02:30:43] 2026-01-28 02:29:36,402 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-28 02:30:43] 2026-01-28 02:29:36,404 | INFO     | did not find any defunct processes belonging to 1682662
[2026-01-28 02:30:43] 2026-01-28 02:29:36,410 | INFO     | did not find any defunct processes belonging to 1682662
[2026-01-28 02:30:43] 2026-01-28 02:29:36,410 | INFO     | ready for new job
[2026-01-28 02:30:43] 2026-01-28 02:29:36,410 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-28 02:30:43] 2026-01-28 02:29:36,411 | INFO     | **************************************
[2026-01-28 02:30:43] 2026-01-28 02:29:36,411 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-28 02:30:43] 2026-01-28 02:29:36,411 | INFO     | **************************************
[2026-01-28 02:30:43] 2026-01-28 02:29:36,411 | INFO     | 
[2026-01-28 02:30:43] 2026-01-28 02:29:36,434 | INFO     | architecture information:
[2026-01-28 02:30:43] 2026-01-28 02:29:36,438 | INFO     | executing command: cat /etc/os-release
[2026-01-28 02:30:43] 2026-01-28 02:29:36,538 | INFO     | cat /etc/os-release:
[2026-01-28 02:30:43] NAME="CentOS Linux"
[2026-01-28 02:30:43] VERSION="7 (Core)"
[2026-01-28 02:30:43] ID="centos"
[2026-01-28 02:30:43] ID_LIKE="rhel fedora"
[2026-01-28 02:30:43] VERSION_ID="7"
[2026-01-28 02:30:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-28 02:30:43] ANSI_COLOR="0;31"
[2026-01-28 02:30:43] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-28 02:30:43] HOME_URL="https://www.centos.org/"
[2026-01-28 02:30:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-28 02:30:43] 
[2026-01-28 02:30:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-28 02:30:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-28 02:30:43] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-28 02:30:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-28 02:30:43] 
[2026-01-28 02:30:43] 2026-01-28 02:29:36,538 | INFO     | **************************************
[2026-01-28 02:30:43] 2026-01-28 02:29:37,042 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/1
[2026-01-28 02:30:43] 2026-01-28 02:29:37,086 | INFO     | sufficient remaining disk space (153531449344 B)
[2026-01-28 02:30:43] 2026-01-28 02:29:37,086 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-28 02:30:43] 2026-01-28 02:29:37,086 | INFO     | current server update state: UPDATING_FINAL
[2026-01-28 02:30:43] 2026-01-28 02:29:37,086 | INFO     | update_server=False
[2026-01-28 02:30:43] 2026-01-28 02:29:37,086 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-28 02:30:43] 2026-01-28 02:29:37,086 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-28 02:30:43] 2026-01-28 02:29:37,090 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-28 02:30:43] 2026-01-28 02:29:37,150 | INFO     | all payload control threads have been joined
[2026-01-28 02:30:43] 2026-01-28 02:29:37,258 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-28 02:30:43] 2026-01-28 02:29:37,258 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-28 02:30:43] 2026-01-28 02:29:37,258 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-28 02:30:43] 2026-01-28 02:29:37,258 | INFO     | will abort loop
[2026-01-28 02:30:43] 2026-01-28 02:29:37,474 | INFO     | all data control threads have been joined
[2026-01-28 02:30:43] 2026-01-28 02:29:38,094 | INFO     | [job] retrieve thread has finished
[2026-01-28 02:30:43] 2026-01-28 02:29:38,094 | INFO     | [job] queue monitor thread has finished
[2026-01-28 02:30:43] 2026-01-28 02:29:38,154 | INFO     | [payload] control thread has finished
[2026-01-28 02:30:43] 2026-01-28 02:29:38,266 | INFO     | [job] job monitor thread has finished
[2026-01-28 02:30:43] 2026-01-28 02:29:38,418 | INFO     | [payload] failed_post thread has finished
[2026-01-28 02:30:43] 2026-01-28 02:29:38,450 | INFO     | all job control threads have been joined
[2026-01-28 02:30:43] 2026-01-28 02:29:38,478 | INFO     | [data] control thread has finished
[2026-01-28 02:30:43] 2026-01-28 02:29:38,642 | INFO     | [job] create_data_payload thread has finished
[2026-01-28 02:30:43] 2026-01-28 02:29:38,646 | INFO     | [payload] validate_post thread has finished
[2026-01-28 02:30:43] 2026-01-28 02:29:38,742 | INFO     | [data] copytool_in thread has finished
[2026-01-28 02:30:43] 2026-01-28 02:29:38,886 | INFO     | [job] validate thread has finished
[2026-01-28 02:30:43] 2026-01-28 02:29:38,930 | INFO     | [payload] validate_pre thread has finished
[2026-01-28 02:30:43] 2026-01-28 02:29:39,104 | INFO     | [data] copytool_out thread has finished
[2026-01-28 02:30:43] 2026-01-28 02:29:39,438 | INFO     | [payload] execute_payloads thread has finished
[2026-01-28 02:30:43] 2026-01-28 02:29:39,454 | INFO     | [job] control thread has finished
[2026-01-28 02:30:43] 2026-01-28 02:29:40,046 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-28 02:30:43] 2026-01-28 02:29:44,062 | INFO     | [data] queue_monitor thread has finished
[2026-01-28 02:30:43] 2026-01-28 02:29:47,290 | INFO     | job.realtimelogging is not enabled
[2026-01-28 02:30:43] 2026-01-28 02:29:48,294 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-28 02:30:43] 2026-01-28 02:30:06,625 | INFO     | PID=1678135 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-28 02:30:43] 2026-01-28 02:30:06,625 | INFO     | .. there are 3 such processes running
[2026-01-28 02:30:43] 2026-01-28 02:30:06,625 | INFO     | found 0 job(s) in 20 queues
[2026-01-28 02:30:43] 2026-01-28 02:30:06,625 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-28 02:30:43] 2026-01-28 02:30:06,625 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-28 02:30:43] 2026-01-28 02:30:36,714 | INFO     | [monitor] cgroup control has ended
[2026-01-28 02:30:43] 2026-01-28 02:30:37,450 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140517222807360)>', '<ExcThread(monitor, started 140516926662400)>']
[2026-01-28 02:30:43] 2026-01-28 02:30:37,846 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-28 02:30:43] 2026-01-28 02:30:37,846 | INFO     | [monitor] control thread has ended
[2026-01-28 02:30:43] 2026-01-28 02:30:42,474 | INFO     | all workflow threads have been joined
[2026-01-28 02:30:43] 2026-01-28 02:30:42,474 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-28 02:30:43] 2026-01-28 02:30:42,474 | INFO     | traces error code: 0
[2026-01-28 02:30:43] 2026-01-28 02:30:42,474 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-28 02:30:43] 2026-01-28 02:30:42,694 [wrapper] ==== pilot stdout END ====
[2026-01-28 02:30:43] 2026-01-28 02:30:42,754 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-28 02:30:43] 2026-01-28 02:30:42,798 [wrapper] pilotpid: 1678135
[2026-01-28 02:30:43] 2026-01-28 02:30:42,850 [wrapper] Pilot exit status: 0
[2026-01-28 02:30:43] 2026-01-28 02:30:43,030 [wrapper] pandaids: 6984225345
[2026-01-28 02:30:43] 2026-01-28 02:30:43,159 [wrapper] cleanup supervisor_pilot 1687818 1678136
[2026-01-28 02:30:43] 2026-01-28 02:30:43,161 [wrapper] Test setup, not cleaning
[2026-01-28 02:30:43] 2026-01-28 02:30:43,174 [wrapper] apfmon messages muted
[2026-01-28 02:30:43] 2026-01-28 02:30:43,234 [wrapper] ==== wrapper stdout END ====
[2026-01-28 02:30:43] 2026-01-28 02:30:43,262 [wrapper] ==== wrapper stderr END ====
[2026-01-28 02:30:43]  *** Error codes and diagnostics ***
[2026-01-28 02:30:43]     "exeErrorCode": 0,
[2026-01-28 02:30:43]     "exeErrorDiag": "",
[2026-01-28 02:30:43]     "pilotErrorCode": 0,
[2026-01-28 02:30:43]     "pilotErrorDiag": "",
[2026-01-28 02:30:43]  *** Listing of results directory ***
[2026-01-28 02:30:44] total 666892
[2026-01-28 02:30:44] -rw-r--r-- 1 boinc boinc      5111 Jan 26 09:48 queuedata.json
[2026-01-28 02:30:44] -rw-r--r-- 1 boinc boinc    584422 Jan 26 09:48 pilot3.tar.gz
[2026-01-28 02:30:44] -rwx------ 1 boinc boinc     36322 Jan 26 09:48 runpilot2-wrapper.sh
[2026-01-28 02:30:44] -rw-rw-r-- 1 boinc boinc       100 Jan 28 01:17 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-28 02:30:44] -rwxr-xr-x 1 boinc boinc      7986 Jan 28 01:17 run_atlas
[2026-01-28 02:30:44] -rw-rw-r-- 1 boinc boinc       105 Jan 28 01:17 job.xml
[2026-01-28 02:30:44] -rw-r--r-- 2 boinc boinc     15845 Jan 28 01:17 start_atlas.sh
[2026-01-28 02:30:44] drwxrwx--x 2 boinc boinc      4096 Jan 28 01:17 shared
[2026-01-28 02:30:44] -rw-r--r-- 2 boinc boinc    597758 Jan 28 01:17 input.tar.gz
[2026-01-28 02:30:44] -rw-rw-r-- 1 boinc boinc      6935 Jan 28 01:17 init_data.xml
[2026-01-28 02:30:44] -rw-r--r-- 2 boinc boinc 500040246 Jan 28 01:17 EVNT.48310824._000037.pool.root.1
[2026-01-28 02:30:44] -rw-rw-r-- 1 boinc boinc         0 Jan 28 01:17 boinc_setup_complete
[2026-01-28 02:30:44] -rw-rw-r-- 1 boinc boinc         0 Jan 28 01:17 boinc_lockfile
[2026-01-28 02:30:44] -rw-rw-r-- 1 boinc boinc      2523 Jan 28 01:17 pandaJob.out
[2026-01-28 02:30:44] -rw------- 1 boinc boinc   1005240 Jan 28 01:17 agis_schedconf.cvmfs.json
[2026-01-28 02:30:44] -rw------- 1 boinc boinc   1516246 Jan 28 01:17 agis_ddmendpoints.agis.ALL.json
[2026-01-28 02:30:44] -rw------- 1 boinc boinc       413 Jan 28 01:17 workernode_map.json
[2026-01-28 02:30:44] drwx------ 5 boinc boinc      4096 Jan 28 01:17 pilot3
[2026-01-28 02:30:44] -rw------- 1 boinc boinc 176757953 Jan 28 02:28 HITS.48310826._010539.pool.root.1
[2026-01-28 02:30:44] -rw-rw-r-- 1 boinc boinc       530 Jan 28 02:29 boinc_task_state.xml
[2026-01-28 02:30:44] -rw------- 1 boinc boinc        95 Jan 28 02:29 pilot_heartbeat.json
[2026-01-28 02:30:44] -rw------- 1 boinc boinc      1015 Jan 28 02:29 memory_monitor_summary.json
[2026-01-28 02:30:44] -rw------- 1 boinc boinc    413971 Jan 28 02:29 log.48310826._010539.job.log.tgz.1
[2026-01-28 02:30:44] -rw------- 1 boinc boinc      6261 Jan 28 02:29 heartbeat.json
[2026-01-28 02:30:44] -rw-rw-r-- 1 boinc boinc        27 Jan 28 02:30 wrapper_checkpoint.txt
[2026-01-28 02:30:44] -rw-rw-r-- 1 boinc boinc      8192 Jan 28 02:30 boinc_mmap_file
[2026-01-28 02:30:44] -rw------- 1 boinc boinc      5101 Jan 28 02:30 pilotlog.txt
[2026-01-28 02:30:44] -rw------- 1 boinc boinc    661711 Jan 28 02:30 log.48310826._010539.job.log.1
[2026-01-28 02:30:44] -rw------- 1 boinc boinc       357 Jan 28 02:30 output.list
[2026-01-28 02:30:44] -rw-rw-r-- 1 boinc boinc       620 Jan 28 02:30 runtime_log
[2026-01-28 02:30:44] -rw------- 1 boinc boinc   1095680 Jan 28 02:30 result.tar.gz
[2026-01-28 02:30:44] -rw-rw-r-- 1 boinc boinc      9156 Jan 28 02:30 runtime_log.err
[2026-01-28 02:30:44] -rw------- 1 boinc boinc       648 Jan 28 02:30 JHyMDmKOY48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmAY9KDm3g2Inn.diag
[2026-01-28 02:30:44] -rw-rw-r-- 1 boinc boinc     21342 Jan 28 02:30 stderr.txt
[2026-01-28 02:30:44] HITS file was successfully produced:
[2026-01-28 02:30:44] -rw------- 1 boinc boinc 176757953 Jan 28 02:28 shared/HITS.pool.root.1
[2026-01-28 02:30:44]  *** Contents of shared directory: ***
[2026-01-28 02:30:44] total 662620
[2026-01-28 02:30:44] -rw-r--r-- 2 boinc boinc     15845 Jan 28 01:17 start_atlas.sh
[2026-01-28 02:30:44] -rw-r--r-- 2 boinc boinc    597758 Jan 28 01:17 input.tar.gz
[2026-01-28 02:30:44] -rw-r--r-- 2 boinc boinc 500040246 Jan 28 01:17 ATLAS.root_0
[2026-01-28 02:30:44] -rw------- 1 boinc boinc 176757953 Jan 28 02:28 HITS.pool.root.1
[2026-01-28 02:30:44] -rw------- 1 boinc boinc   1095680 Jan 28 02:30 result.tar.gz
02:30:46 (1674295): run_atlas exited; CPU time 21709.367034
02:30:46 (1674295): called boinc_finish(0)

</stderr_txt>
]]>

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