Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:25:24 (1463242): wrapper (7.7.26015): starting
02:25:24 (1463242): wrapper: running run_atlas (--nthreads 4)
[2026-01-28 02:25:24] Arguments: --nthreads 4
[2026-01-28 02:25:24] Threads: 4
[2026-01-28 02:25:24] Checking for CVMFS
[2026-01-28 02:25:24] No cvmfs_config command found, will try listing directly
[2026-01-28 02:25:24] CVMFS is ok
[2026-01-28 02:25:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-28 02:25:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-28 02:25:24] Further information can be found at the LHC@home message board.
[2026-01-28 02:25:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-28 02:25:24] Checking for apptainer binary...
[2026-01-28 02:25:24] which: no apptainer in ((null))
[2026-01-28 02:25:24] apptainer is not installed, using version from CVMFS
[2026-01-28 02:25:24] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-28 02:25:25] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot52/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut09.grid.cesnet.cz
[2026-01-28 02:25:25] apptainer works
[2026-01-28 02:25:25] Set ATHENA_PROC_NUMBER=4
[2026-01-28 02:25:25] Set ATHENA_CORE_NUMBER=4
[2026-01-28 02:25:25] Starting ATLAS job with PandaID=6984228695
[2026-01-28 02:25:25] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot52/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-28 05:47:55]  *** The last 200 lines of the pilot log: ***
[2026-01-28 05:47:55] 2026-01-28 04:43:17,080 | INFO     | monitor loop #858: job 0:6984228695 is in state 'finished'
[2026-01-28 05:47:55] 2026-01-28 04:43:17,080 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-28 05:47:55] 2026-01-28 04:43:17,286 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-01-28 05:47:55] 2026-01-28 04:43:17,286 | INFO     | reading metadata from: /scratch/boinc/var/slot52/slots/0/PanDA_Pilot-6984228695/jobReport.json
[2026-01-28 05:47:55] 2026-01-28 04:43:17,289 | INFO     | added worker_node to metadata from /scratch/boinc/var/slot52/slots/0/workernode_map.json
[2026-01-28 05:47:55] 2026-01-28 04:43:17,289 | INFO     | this job has now completed (state=finished)
[2026-01-28 05:47:55] 2026-01-28 04:43:17,289 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-28 05:47:55] 2026-01-28 04:43:17,289 | INFO     | log transfer has been attempted: DONE
[2026-01-28 05:47:55] 2026-01-28 04:43:17,289 | INFO     | job 6984228695 has finished - writing final server update
[2026-01-28 05:47:55] 2026-01-28 04:43:17,290 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2255298/.job.ad'
[2026-01-28 05:47:55] 2026-01-28 04:43:17,290 | INFO     | total number of processed events: 400 (read)
[2026-01-28 05:47:55] 2026-01-28 04:43:17,302 | INFO     | using path: /scratch/boinc/var/slot52/slots/0/PanDA_Pilot-6984228695/memory_monitor_summary.json (trf name=prmon)
[2026-01-28 05:47:55] 2026-01-28 04:43:17,303 | INFO     | extracted standard info from prmon json
[2026-01-28 05:47:55] 2026-01-28 04:43:17,303 | INFO     | extracted standard memory fields from prmon json
[2026-01-28 05:47:55] 2026-01-28 04:43:17,303 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-28 05:47:55] 2026-01-28 04:43:17,303 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-28 05:47:55] 2026-01-28 04:43:17,303 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-28 05:47:55] 2026-01-28 04:43:17,307 | INFO     | fitting pss+swap vs Time
[2026-01-28 05:47:55] 2026-01-28 04:43:17,307 | INFO     | sum of square deviations: 2263977332.5
[2026-01-28 05:47:55] 2026-01-28 04:43:17,309 | INFO     | sum of deviations: -51574487888.0
[2026-01-28 05:47:55] 2026-01-28 04:43:17,309 | INFO     | mean x: 1769569452.5
[2026-01-28 05:47:55] 2026-01-28 04:43:17,309 | INFO     | mean y: 2409949.216494845
[2026-01-28 05:47:55] 2026-01-28 04:43:17,309 | INFO     | intersect: 40314049551.26009
[2026-01-28 05:47:55] 2026-01-28 04:43:17,309 | INFO     | chi2: 1.6913636332632673
[2026-01-28 05:47:55] 2026-01-28 04:43:17,310 | INFO     | sum of square deviations: 2093397390.0
[2026-01-28 05:47:55] 2026-01-28 04:43:17,311 | INFO     | sum of deviations: -49628001007.0
[2026-01-28 05:47:55] 2026-01-28 04:43:17,311 | INFO     | mean x: 1769569300.0
[2026-01-28 05:47:55] 2026-01-28 04:43:17,311 | INFO     | mean y: 2411689.814814815
[2026-01-28 05:47:55] 2026-01-28 04:43:17,311 | INFO     | intersect: 41953446606.48502
[2026-01-28 05:47:55] 2026-01-28 04:43:17,312 | INFO     | chi2: 1.6832485450335037
[2026-01-28 05:47:55] 2026-01-28 04:43:17,312 | INFO     | current chi2=1.6832485450335037 (change=0.4797955962968517 %)
[2026-01-28 05:47:55] 2026-01-28 04:43:17,312 | INFO     | right removable region: 188
[2026-01-28 05:47:55] 2026-01-28 04:43:17,312 | INFO     | sum of square deviations: 2093397390.0
[2026-01-28 05:47:55] 2026-01-28 04:43:17,313 | INFO     | sum of deviations: -72962688711.00002
[2026-01-28 05:47:55] 2026-01-28 04:43:17,313 | INFO     | mean x: 1769569605.0
[2026-01-28 05:47:55] 2026-01-28 04:43:17,314 | INFO     | mean y: 2428746.3597883596
[2026-01-28 05:47:55] 2026-01-28 04:43:17,314 | INFO     | intersect: 61678514165.60369
[2026-01-28 05:47:55] 2026-01-28 04:43:17,314 | INFO     | chi2: 0.4089121865526668
[2026-01-28 05:47:55] 2026-01-28 04:43:17,314 | INFO     | current chi2=0.4089121865526668 (change=75.82352023475143 %)
[2026-01-28 05:47:55] 2026-01-28 04:43:17,314 | INFO     | sum of square deviations: 1931608310.0
[2026-01-28 05:47:55] 2026-01-28 04:43:17,315 | INFO     | sum of deviations: -65888456369.0
[2026-01-28 05:47:55] 2026-01-28 04:43:17,316 | INFO     | mean x: 1769569757.5
[2026-01-28 05:47:55] 2026-01-28 04:43:17,316 | INFO     | mean y: 2422058.586956522
[2026-01-28 05:47:55] 2026-01-28 04:43:17,316 | INFO     | intersect: 60363634606.352745
[2026-01-28 05:47:55] 2026-01-28 04:43:17,316 | INFO     | chi2: 0.4041688590543217
[2026-01-28 05:47:55] 2026-01-28 04:43:17,316 | INFO     | current chi2=0.4041688590543217 (change=1.159986827082293 %)
[2026-01-28 05:47:55] 2026-01-28 04:43:17,316 | INFO     | left removable region: 20
[2026-01-28 05:47:55] 2026-01-28 04:43:17,317 | INFO     | sum of square deviations: 1470248962.0
[2026-01-28 05:47:55] 2026-01-28 04:43:17,318 | INFO     | sum of deviations: -46853722562.5
[2026-01-28 05:47:55] 2026-01-28 04:43:17,318 | INFO     | mean x: 1769569879.5
[2026-01-28 05:47:55] 2026-01-28 04:43:17,318 | INFO     | mean y: 2406683.910714286
[2026-01-28 05:47:55] 2026-01-28 04:43:17,318 | INFO     | intersect: 56394853359.24429
[2026-01-28 05:47:55] 2026-01-28 04:43:17,318 | INFO     | chi2: 0.3656592916123162
[2026-01-28 05:47:55] 2026-01-28 04:43:17,318 | INFO     | current memory leak: -31.87 B/s (using 168 data points, chi2=0.37)
[2026-01-28 05:47:55] 2026-01-28 04:43:17,319 | INFO     | could have reported an average CPU frequency of 2625 MHz (10 samples)
[2026-01-28 05:47:55] 2026-01-28 04:43:17,319 | INFO     | ..............................
[2026-01-28 05:47:55] 2026-01-28 04:43:17,319 | INFO     | . Timing measurements:
[2026-01-28 05:47:55] 2026-01-28 04:43:17,319 | INFO     | . get job = 0 s
[2026-01-28 05:47:55] 2026-01-28 04:43:17,319 | INFO     | . initial setup = 6 s
[2026-01-28 05:47:55] 2026-01-28 04:43:17,320 | INFO     | . payload setup = 6 s
[2026-01-28 05:47:55] 2026-01-28 04:43:17,320 | INFO     | . stage-in = 0 s
[2026-01-28 05:47:55] 2026-01-28 04:43:17,320 | INFO     | . payload execution = 11825 s
[2026-01-28 05:47:55] 2026-01-28 04:43:17,320 | INFO     | . stage-out = 1 s
[2026-01-28 05:47:55] 2026-01-28 04:43:17,320 | INFO     | . log creation = 0 s
[2026-01-28 05:47:55] 2026-01-28 04:43:17,320 | INFO     | ..............................
[2026-01-28 05:47:55] 2026-01-28 04:43:17,509 | INFO     | 
[2026-01-28 05:47:55] 2026-01-28 04:43:17,510 | INFO     | job summary report
[2026-01-28 05:47:55] 2026-01-28 04:43:17,510 | INFO     | --------------------------------------------------
[2026-01-28 05:47:55] 2026-01-28 04:43:17,510 | INFO     | PanDA job id: 6984228695
[2026-01-28 05:47:55] 2026-01-28 04:43:17,510 | INFO     | task id: 48317952
[2026-01-28 05:47:55] 2026-01-28 04:43:17,510 | INFO     | errors: (none)
[2026-01-28 05:47:55] 2026-01-28 04:43:17,510 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-28 05:47:55] 2026-01-28 04:43:17,510 | INFO     | pilot state: finished 
[2026-01-28 05:47:55] 2026-01-28 04:43:17,510 | INFO     | transexitcode: 0
[2026-01-28 05:47:55] 2026-01-28 04:43:17,510 | INFO     | exeerrorcode: 0
[2026-01-28 05:47:55] 2026-01-28 04:43:17,510 | INFO     | exeerrordiag: 
[2026-01-28 05:47:55] 2026-01-28 04:43:17,510 | INFO     | exitcode: 0
[2026-01-28 05:47:55] 2026-01-28 04:43:17,510 | INFO     | exitmsg: OK
[2026-01-28 05:47:55] 2026-01-28 04:43:17,511 | INFO     | cpuconsumptiontime: 45631 s
[2026-01-28 05:47:55] 2026-01-28 04:43:17,511 | INFO     | nevents: 400
[2026-01-28 05:47:55] 2026-01-28 04:43:17,511 | INFO     | neventsw: 0
[2026-01-28 05:47:55] 2026-01-28 04:43:17,511 | INFO     | pid: 1472100
[2026-01-28 05:47:55] 2026-01-28 04:43:17,511 | INFO     | pgrp: 1472100
[2026-01-28 05:47:55] 2026-01-28 04:43:17,511 | INFO     | corecount: 4
[2026-01-28 05:47:55] 2026-01-28 04:43:17,511 | INFO     | event service: False
[2026-01-28 05:47:55] 2026-01-28 04:43:17,511 | INFO     | sizes: {0: 2284248, 11: 2284248, 11835: 2313770, 11836: 2322790, 11840: 2322846, 11843: 2323040}
[2026-01-28 05:47:55] 2026-01-28 04:43:17,511 | INFO     | --------------------------------------------------
[2026-01-28 05:47:55] 2026-01-28 04:43:17,511 | INFO     | 
[2026-01-28 05:47:55] 2026-01-28 04:43:17,511 | INFO     | executing command: ls -lF /scratch/boinc/var/slot52/slots/0
[2026-01-28 05:47:55] 2026-01-28 04:43:17,535 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-28 05:47:55] 2026-01-28 04:43:17,536 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-28 05:47:55] 2026-01-28 04:43:17,536 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-28 05:47:55] 2026-01-28 04:43:17,536 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-28 05:47:55] 2026-01-28 04:43:17,536 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-28 05:47:55] 2026-01-28 04:43:17,536 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-28 05:47:55] 2026-01-28 04:43:17,536 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-28 05:47:55] 2026-01-28 04:43:17,536 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-28 05:47:55] 2026-01-28 04:43:17,536 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-28 05:47:55] 2026-01-28 04:43:17,536 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-28 05:47:55] 2026-01-28 04:43:17,536 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-28 05:47:55] 2026-01-28 04:43:17,536 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-28 05:47:55] 2026-01-28 04:43:17,536 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-28 05:47:55] 2026-01-28 04:43:17,537 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-28 05:47:55] 2026-01-28 04:43:17,537 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-28 05:47:55] 2026-01-28 04:43:17,537 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-28 05:47:55] 2026-01-28 04:43:17,537 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-28 05:47:55] 2026-01-28 04:43:17,537 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-28 05:47:55] 2026-01-28 04:43:17,537 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-28 05:47:55] 2026-01-28 04:43:17,537 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-28 05:47:55] 2026-01-28 04:43:17,537 | INFO     | job 6984228695 has completed (purged errors)
[2026-01-28 05:47:55] 2026-01-28 04:43:17,537 | INFO     | overall cleanup function is called
[2026-01-28 05:47:55] 2026-01-28 04:43:18,546 | INFO     | --- collectZombieJob: --- 10, [1472100]
[2026-01-28 05:47:55] 2026-01-28 04:43:18,546 | INFO     | zombie collector waiting for pid 1472100
[2026-01-28 05:47:55] 2026-01-28 04:43:18,546 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-28 05:47:55] 2026-01-28 04:43:18,546 | INFO     | collected zombie processes
[2026-01-28 05:47:55] 2026-01-28 04:43:18,546 | INFO     | will attempt to kill all subprocesses of pid=1472100
[2026-01-28 05:47:55] 2026-01-28 04:43:18,940 | INFO     | process IDs to be killed: [1472100] (in reverse order)
[2026-01-28 05:47:55] 2026-01-28 04:43:19,050 | WARNING  | found no corresponding commands to process id(s)
[2026-01-28 05:47:55] 2026-01-28 04:43:19,051 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-28 05:47:55] 2026-01-28 04:43:19,063 | INFO     | did not find any defunct processes belonging to 1472100
[2026-01-28 05:47:55] 2026-01-28 04:43:19,076 | INFO     | did not find any defunct processes belonging to 1472100
[2026-01-28 05:47:55] 2026-01-28 04:43:19,076 | INFO     | ready for new job
[2026-01-28 05:47:55] 2026-01-28 04:43:19,077 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-28 05:47:55] 2026-01-28 04:43:19,079 | INFO     | **************************************
[2026-01-28 05:47:55] 2026-01-28 04:43:19,079 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-28 05:47:55] 2026-01-28 04:43:19,079 | INFO     | **************************************
[2026-01-28 05:47:55] 2026-01-28 04:43:19,079 | INFO     | 
[2026-01-28 05:47:55] 2026-01-28 04:43:19,083 | INFO     | architecture information:
[2026-01-28 05:47:55] 2026-01-28 04:43:19,084 | INFO     | executing command: cat /etc/os-release
[2026-01-28 05:47:55] 2026-01-28 04:43:19,099 | INFO     | cat /etc/os-release:
[2026-01-28 05:47:55] NAME="CentOS Linux"
[2026-01-28 05:47:55] VERSION="7 (Core)"
[2026-01-28 05:47:55] ID="centos"
[2026-01-28 05:47:55] ID_LIKE="rhel fedora"
[2026-01-28 05:47:55] VERSION_ID="7"
[2026-01-28 05:47:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-28 05:47:55] ANSI_COLOR="0;31"
[2026-01-28 05:47:55] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-28 05:47:55] HOME_URL="https://www.centos.org/"
[2026-01-28 05:47:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-28 05:47:55] 
[2026-01-28 05:47:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-28 05:47:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-28 05:47:55] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-28 05:47:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-28 05:47:55] 
[2026-01-28 05:47:55] 2026-01-28 04:43:19,099 | INFO     | **************************************
[2026-01-28 05:47:55] 2026-01-28 04:43:19,602 | INFO     | executing command: df -mP /scratch/boinc/var/slot52/slots/0
[2026-01-28 05:47:55] 2026-01-28 04:43:19,618 | INFO     | sufficient remaining disk space (682626121728 B)
[2026-01-28 05:47:55] 2026-01-28 04:43:19,618 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-28 05:47:55] 2026-01-28 04:43:19,619 | INFO     | current server update state: UPDATING_FINAL
[2026-01-28 05:47:55] 2026-01-28 04:43:19,619 | INFO     | update_server=False
[2026-01-28 05:47:55] 2026-01-28 04:43:19,619 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-28 05:47:55] 2026-01-28 04:43:19,619 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-28 05:47:55] 2026-01-28 04:43:19,670 | INFO     | all payload control threads have been joined
[2026-01-28 05:47:55] 2026-01-28 04:43:20,130 | INFO     | all data control threads have been joined
[2026-01-28 05:47:55] 2026-01-28 04:43:20,510 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-28 05:47:55] 2026-01-28 04:43:20,588 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-28 05:47:55] 2026-01-28 04:43:20,588 | INFO     | aborting loop
[2026-01-28 05:47:55] 2026-01-28 04:43:20,624 | INFO     | [job] retrieve thread has finished
[2026-01-28 05:47:55] 2026-01-28 04:43:20,658 | INFO     | all job control threads have been joined
[2026-01-28 05:47:55] 2026-01-28 04:43:20,676 | INFO     | [payload] control thread has finished
[2026-01-28 05:47:55] 2026-01-28 04:43:20,814 | INFO     | [data] copytool_in thread has finished
[2026-01-28 05:47:55] 2026-01-28 04:43:21,103 | INFO     | [payload] failed_post thread has finished
[2026-01-28 05:47:55] 2026-01-28 04:43:21,136 | INFO     | [data] control thread has finished
[2026-01-28 05:47:55] 2026-01-28 04:43:21,197 | INFO     | [payload] execute_payloads thread has finished
[2026-01-28 05:47:55] 2026-01-28 04:43:21,395 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-28 05:47:55] 2026-01-28 04:43:21,593 | INFO     | [job] job monitor thread has finished
[2026-01-28 05:47:55] 2026-01-28 04:43:21,625 | INFO     | [data] copytool_out thread has finished
[2026-01-28 05:47:55] 2026-01-28 04:43:21,663 | INFO     | [job] control thread has finished
[2026-01-28 05:47:55] 2026-01-28 04:43:21,833 | INFO     | [job] validate thread has finished
[2026-01-28 05:47:55] 2026-01-28 04:43:21,921 | INFO     | [job] create_data_payload thread has finished
[2026-01-28 05:47:55] 2026-01-28 04:43:21,995 | INFO     | [payload] validate_post thread has finished
[2026-01-28 05:47:55] 2026-01-28 04:43:22,115 | INFO     | [payload] validate_pre thread has finished
[2026-01-28 05:47:55] 2026-01-28 04:43:22,423 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-28 05:47:55] 2026-01-28 04:43:23,429 | INFO     | [job] queue monitor thread has finished
[2026-01-28 05:47:55] 2026-01-28 04:43:24,516 | INFO     | [data] queue_monitor thread has finished
[2026-01-28 05:47:55] 2026-01-28 04:43:49,615 | INFO     | PID=1467360 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-28 05:47:55] 2026-01-28 04:43:49,616 | INFO     | .. there are 4 such processes running
[2026-01-28 05:47:55] 2026-01-28 04:43:49,616 | INFO     | found 0 job(s) in 20 queues
[2026-01-28 05:47:55] 2026-01-28 04:43:49,617 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-28 05:47:55] 2026-01-28 04:43:49,617 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-28 05:47:55] 2026-01-28 04:44:01,665 | INFO     | [monitor] cgroup control has ended
[2026-01-28 05:47:55] 2026-01-28 04:44:02,822 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22461830903616)>', '<ExcThread(monitor, started 22461525497600)>']
[2026-01-28 05:47:55] 2026-01-28 04:44:03,659 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-28 05:47:55] 2026-01-28 04:44:03,659 | INFO     | [monitor] control thread has ended
[2026-01-28 05:47:55] 2026-01-28 04:44:07,846 | INFO     | all workflow threads have been joined
[2026-01-28 05:47:55] 2026-01-28 04:44:07,847 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-28 05:47:55] 2026-01-28 04:44:07,847 | INFO     | traces error code: 0
[2026-01-28 05:47:55] 2026-01-28 04:44:07,847 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-28 05:47:55] 2026-01-28 04:44:07,998 [wrapper] ==== pilot stdout END ====
[2026-01-28 05:47:55] 2026-01-28 04:44:08,002 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-28 05:47:55] 2026-01-28 04:44:08,005 [wrapper] pilotpid: 1467360
[2026-01-28 05:47:55] 2026-01-28 04:44:08,008 [wrapper] Pilot exit status: 0
[2026-01-28 05:47:55] 2026-01-28 04:44:08,019 [wrapper] pandaids: 6984228695
[2026-01-28 05:47:55] 2026-01-28 04:44:08,106 [wrapper] cleanup supervisor_pilot 1566011 1467361
[2026-01-28 05:47:55] 2026-01-28 04:44:08,109 [wrapper] Test setup, not cleaning
[2026-01-28 05:47:55] 2026-01-28 04:44:08,112 [wrapper] apfmon messages muted
[2026-01-28 05:47:55] 2026-01-28 04:44:08,115 [wrapper] ==== wrapper stdout END ====
[2026-01-28 05:47:55] 2026-01-28 04:44:08,118 [wrapper] ==== wrapper stderr END ====
[2026-01-28 05:47:55]  *** Error codes and diagnostics ***
[2026-01-28 05:47:55]     "exeErrorCode": 0,
[2026-01-28 05:47:55]     "exeErrorDiag": "",
[2026-01-28 05:47:55]     "pilotErrorCode": 0,
[2026-01-28 05:47:55]     "pilotErrorDiag": "",
[2026-01-28 05:47:55]  *** Listing of results directory ***
[2026-01-28 05:47:55] total 675768
[2026-01-28 05:47:55] -rw-r--r-- 1 boinc boinc    584422 Jan 26 12:54 pilot3.tar.gz
[2026-01-28 05:47:55] -rwx------ 1 boinc boinc     36322 Jan 26 12:56 runpilot2-wrapper.sh
[2026-01-28 05:47:55] -rw-r--r-- 1 boinc boinc      5111 Jan 26 12:58 queuedata.json
[2026-01-28 05:47:55] -rw-r--r-- 1 boinc boinc       100 Jan 28 02:25 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-28 05:47:55] -rwxr-xr-x 1 boinc boinc      7986 Jan 28 02:25 run_atlas
[2026-01-28 05:47:55] -rw-r--r-- 1 boinc boinc       105 Jan 28 02:25 job.xml
[2026-01-28 05:47:55] -rw-r--r-- 2 boinc boinc 498252744 Jan 28 02:25 EVNT.48317949._000023.pool.root.1
[2026-01-28 05:47:55] -rw-r--r-- 1 boinc boinc      6638 Jan 28 02:25 init_data.xml
[2026-01-28 05:47:55] drwxrwx--x 2 boinc boinc      4096 Jan 28 02:25 shared
[2026-01-28 05:47:55] -rw-r--r-- 2 boinc boinc    597759 Jan 28 02:25 input.tar.gz
[2026-01-28 05:47:55] -rw-r--r-- 2 boinc boinc     15845 Jan 28 02:25 start_atlas.sh
[2026-01-28 05:47:55] -rw-r--r-- 1 boinc boinc         0 Jan 28 02:25 boinc_lockfile
[2026-01-28 05:47:55] -rw-r--r-- 1 boinc boinc      2519 Jan 28 02:25 pandaJob.out
[2026-01-28 05:47:55] -rw------- 1 boinc boinc   1005240 Jan 28 02:25 agis_schedconf.cvmfs.json
[2026-01-28 05:47:55] -rw------- 1 boinc boinc       452 Jan 28 02:25 workernode_map.json
[2026-01-28 05:47:55] drwx------ 5 boinc boinc      4096 Jan 28 02:25 pilot3
[2026-01-28 05:47:55] -rw------- 1 boinc boinc 185648661 Jan 28 05:42 HITS.48317952._001159.pool.root.1
[2026-01-28 05:47:55] -rw-r--r-- 1 boinc boinc       530 Jan 28 05:42 boinc_task_state.xml
[2026-01-28 05:47:55] -rw------- 1 boinc boinc        95 Jan 28 05:43 pilot_heartbeat.json
[2026-01-28 05:47:55] -rw------- 1 boinc boinc      1035 Jan 28 05:43 memory_monitor_summary.json
[2026-01-28 05:47:55] -rw------- 1 boinc boinc   1516246 Jan 28 05:43 agis_ddmendpoints.agis.ALL.json
[2026-01-28 05:47:55] -rw------- 1 boinc boinc    397218 Jan 28 05:43 log.48317952._001159.job.log.tgz.1
[2026-01-28 05:47:55] -rw------- 1 boinc boinc      6407 Jan 28 05:43 heartbeat.json
[2026-01-28 05:47:55] -rw------- 1 boinc boinc      4829 Jan 28 05:44 pilotlog.txt
[2026-01-28 05:47:55] -rw------- 1 boinc boinc   1675385 Jan 28 05:44 log.48317952._001159.job.log.1
[2026-01-28 05:47:55] -rw------- 1 boinc boinc       357 Jan 28 05:44 output.list
[2026-01-28 05:47:55] -rw-r--r-- 1 boinc boinc       620 Jan 28 05:44 runtime_log
[2026-01-28 05:47:55] -rw------- 1 boinc boinc   2088960 Jan 28 05:44 result.tar.gz
[2026-01-28 05:47:55] -rw-r--r-- 1 boinc boinc      9205 Jan 28 05:44 runtime_log.err
[2026-01-28 05:47:55] -rw------- 1 boinc boinc       666 Jan 28 05:44 gkbNDmjNa48n9Rq4apOajLDm4fhM0noT9bVo0NGKDm8E3KDmR2DkHo.diag
[2026-01-28 05:47:55] -rw-r--r-- 1 boinc boinc        26 Jan 28 05:47 wrapper_checkpoint.txt
[2026-01-28 05:47:55] -rw-r--r-- 1 boinc boinc      8192 Jan 28 05:47 boinc_mmap_file
[2026-01-28 05:47:55] -rw-r--r-- 1 boinc boinc     21140 Jan 28 05:47 stderr.txt
[2026-01-28 05:47:55] HITS file was successfully produced:
[2026-01-28 05:47:55] -rw------- 1 boinc boinc 185648661 Jan 28 05:42 shared/HITS.pool.root.1
[2026-01-28 05:47:55]  *** Contents of shared directory: ***
[2026-01-28 05:47:55] total 670524
[2026-01-28 05:47:55] -rw-r--r-- 2 boinc boinc 498252744 Jan 28 02:25 ATLAS.root_0
[2026-01-28 05:47:55] -rw-r--r-- 2 boinc boinc    597759 Jan 28 02:25 input.tar.gz
[2026-01-28 05:47:55] -rw-r--r-- 2 boinc boinc     15845 Jan 28 02:25 start_atlas.sh
[2026-01-28 05:47:55] -rw------- 1 boinc boinc 185648661 Jan 28 05:42 HITS.pool.root.1
[2026-01-28 05:47:55] -rw------- 1 boinc boinc   2088960 Jan 28 05:44 result.tar.gz
05:47:57 (1463242): run_atlas exited; CPU time 46176.302161
05:47:57 (1463242): called boinc_finish(0)

</stderr_txt>
]]>

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