Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
01:17:00 (1661420): wrapper (7.7.26015): starting
01:17:00 (1661420): wrapper: running run_atlas (--nthreads 12)
[2026-01-28 01:17:00] Arguments: --nthreads 12
[2026-01-28 01:17:00] Threads: 12
[2026-01-28 01:17:00] Checking for CVMFS
[2026-01-28 01:17:00] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-28 01:17:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-28 01:17:00] Running cvmfs_config stat atlas.cern.ch
[2026-01-28 01:17:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-28 01:17:00] 2.13.1.0 2787 3462 72556 155605 0 188 2942650 4096001 993 130560 0 4923821 99.958 356989 1145 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2026-01-28 01:17:00] CVMFS is ok
[2026-01-28 01:17:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-28 01:17:00] Checking for apptainer binary...
[2026-01-28 01:17:00] apptainer is not installed, using version from CVMFS
[2026-01-28 01:17:00] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-28 01:17:00] ryzen7
[2026-01-28 01:17:00] apptainer works
[2026-01-28 01:17:00] Set ATHENA_PROC_NUMBER=12
[2026-01-28 01:17:00] Set ATHENA_CORE_NUMBER=12
[2026-01-28 01:17:00] Starting ATLAS job with PandaID=6984229467
[2026-01-28 01:17:00] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-28 02:38:28]  *** The last 200 lines of the pilot log: ***
[2026-01-28 02:38:28]  is_altstaged=None
[2026-01-28 02:38:28]  is_tar=False
[2026-01-28 02:38:28]  lfn=log.48317952._001487.job.log.tgz.1
[2026-01-28 02:38:28]  mtime=0
[2026-01-28 02:38:28]  protocol_id=None
[2026-01-28 02:38:28]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-28 02:38:28]  replicas=None
[2026-01-28 02:38:28]  scope=mc23_13p6TeV
[2026-01-28 02:38:28]  status=None
[2026-01-28 02:38:28]  status_code=0
[2026-01-28 02:38:28]  storage_token=
[2026-01-28 02:38:28]  surl=/opt/boinc/instance_homes/boinc_31417/slots/0/PanDA_Pilot-6984229467/log.48317952._001487.job.log.tgz.1
[2026-01-28 02:38:28]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ea/b7/log.48317952._001487.job.log.tgz.1
[2026-01-28 02:38:28]  workdir=None
[2026-01-28 02:38:28] ]
[2026-01-28 02:38:28] 2026-01-28 02:37:50,299 | INFO     | transferring file log.48317952._001487.job.log.tgz.1 from /opt/boinc/instance_homes/boinc_31417/slots/0/PanDA_Pilot-6984229467/log.48317952._001487.job.log.tgz.1 t
[2026-01-28 02:38:28] 2026-01-28 02:37:50,299 | INFO     | executing command: /usr/bin/env mv /opt/boinc/instance_homes/boinc_31417/slots/0/PanDA_Pilot-6984229467/log.48317952._001487.job.log.tgz.1 /opt/boinc/instance_home
[2026-01-28 02:38:28] 2026-01-28 02:37:50,391 | INFO     | adding to output.list: log.48317952._001487.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ea/b7/log.48317952._001487.job.log.tg
[2026-01-28 02:38:28] 2026-01-28 02:37:50,392 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-28 02:38:28] 2026-01-28 02:37:50,392 | INFO     | summary of transferred files:
[2026-01-28 02:38:28] 2026-01-28 02:37:50,392 | INFO     |  -- lfn=log.48317952._001487.job.log.tgz.1, status_code=0, status=transferred
[2026-01-28 02:38:28] 2026-01-28 02:37:50,392 | INFO     | stage-out finished correctly
[2026-01-28 02:38:28] 2026-01-28 02:37:50,517 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-28 02:38:28] 2026-01-28 02:37:51,350 | INFO     | time since job start (4844s) is within the limit (349056.0s)
[2026-01-28 02:38:28] 2026-01-28 02:37:51,599 | WARNING  | process 1669830 can no longer be monitored (due to stat problems) - aborting
[2026-01-28 02:38:28] 2026-01-28 02:37:51,599 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/0/PanDA_Pilot-6984229467/memory_monitor_summary.json (trf name=prmon)
[2026-01-28 02:38:28] 2026-01-28 02:37:51,702 | INFO     | number of running child processes to parent process 1669830: 1
[2026-01-28 02:38:28] 2026-01-28 02:37:51,702 | INFO     | maximum number of monitored processes: 6
[2026-01-28 02:38:28] 2026-01-28 02:37:53,362 | INFO     | time since job start (4846s) is within the limit (349056.0s)
[2026-01-28 02:38:28] 2026-01-28 02:37:53,563 | INFO     | job 6984229467 has state=finished
[2026-01-28 02:38:28] 2026-01-28 02:37:53,563 | INFO     | preparing for final server update for job 6984229467 in state='finished'
[2026-01-28 02:38:28] 2026-01-28 02:37:53,563 | INFO     | reading metadata from: /opt/boinc/instance_homes/boinc_31417/slots/0/PanDA_Pilot-6984229467/jobReport.json
[2026-01-28 02:38:28] 2026-01-28 02:37:53,565 | INFO     | added worker_node to metadata from /opt/boinc/instance_homes/boinc_31417/slots/0/workernode_map.json
[2026-01-28 02:38:28] 2026-01-28 02:37:53,565 | INFO     | this job has now completed (state=finished)
[2026-01-28 02:38:28] 2026-01-28 02:37:53,565 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-28 02:38:28] 2026-01-28 02:37:53,565 | INFO     | log transfer has been attempted: DONE
[2026-01-28 02:38:28] 2026-01-28 02:37:53,565 | INFO     | job 6984229467 has finished - writing final server update
[2026-01-28 02:38:28] 2026-01-28 02:37:53,565 | INFO     | total number of processed events: 400 (read)
[2026-01-28 02:38:28] 2026-01-28 02:37:53,588 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/0/PanDA_Pilot-6984229467/memory_monitor_summary.json (trf name=prmon)
[2026-01-28 02:38:28] 2026-01-28 02:37:53,588 | INFO     | extracted standard info from prmon json
[2026-01-28 02:38:28] 2026-01-28 02:37:53,588 | INFO     | extracted standard memory fields from prmon json
[2026-01-28 02:38:28] 2026-01-28 02:37:53,588 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-28 02:38:28] 2026-01-28 02:37:53,588 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-28 02:38:28] 2026-01-28 02:37:53,588 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-28 02:38:28] 2026-01-28 02:37:53,589 | INFO     | fitting pss+swap vs Time
[2026-01-28 02:38:28] 2026-01-28 02:37:53,589 | INFO     | sum of square deviations: 120605052.0
[2026-01-28 02:38:28] 2026-01-28 02:37:53,594 | INFO     | sum of deviations: -4713291392.0
[2026-01-28 02:38:28] 2026-01-28 02:37:53,594 | INFO     | mean x: 1769565543.0
[2026-01-28 02:38:28] 2026-01-28 02:37:53,594 | INFO     | mean y: 2828337.835616438
[2026-01-28 02:38:28] 2026-01-28 02:37:53,594 | INFO     | intersect: 69158124099.42366
[2026-01-28 02:38:28] 2026-01-28 02:37:53,594 | INFO     | chi2: 0.03623709761828587
[2026-01-28 02:38:28] 2026-01-28 02:37:53,594 | INFO     | current memory leak: -39.08 B/s (using 73 data points, chi2=0.04)
[2026-01-28 02:38:28] 2026-01-28 02:37:53,594 | INFO     | could have reported an average CPU frequency of 3457 MHz (6 samples)
[2026-01-28 02:38:28] 2026-01-28 02:37:53,594 | INFO     | ..............................
[2026-01-28 02:38:28] 2026-01-28 02:37:53,594 | INFO     | . Timing measurements:
[2026-01-28 02:38:28] 2026-01-28 02:37:53,595 | INFO     | . get job = 0 s
[2026-01-28 02:38:28] 2026-01-28 02:37:53,595 | INFO     | . initial setup = 3 s
[2026-01-28 02:38:28] 2026-01-28 02:37:53,595 | INFO     | . payload setup = 2 s
[2026-01-28 02:38:28] 2026-01-28 02:37:53,595 | INFO     | . stage-in = 0 s
[2026-01-28 02:38:28] 2026-01-28 02:37:53,595 | INFO     | . payload execution = 4824 s
[2026-01-28 02:38:28] 2026-01-28 02:37:53,595 | INFO     | . stage-out = 2 s
[2026-01-28 02:38:28] 2026-01-28 02:37:53,595 | INFO     | . log creation = 1 s
[2026-01-28 02:38:28] 2026-01-28 02:37:53,595 | INFO     | ..............................
[2026-01-28 02:38:28] 2026-01-28 02:37:53,730 | INFO     | 
[2026-01-28 02:38:28] 2026-01-28 02:37:53,730 | INFO     | job summary report
[2026-01-28 02:38:28] 2026-01-28 02:37:53,730 | INFO     | --------------------------------------------------
[2026-01-28 02:38:28] 2026-01-28 02:37:53,730 | INFO     | PanDA job id: 6984229467
[2026-01-28 02:38:28] 2026-01-28 02:37:53,730 | INFO     | task id: 48317952
[2026-01-28 02:38:28] 2026-01-28 02:37:53,730 | INFO     | errors: (none)
[2026-01-28 02:38:28] 2026-01-28 02:37:53,730 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-28 02:38:28] 2026-01-28 02:37:53,730 | INFO     | pilot state: finished 
[2026-01-28 02:38:28] 2026-01-28 02:37:53,730 | INFO     | transexitcode: 0
[2026-01-28 02:38:28] 2026-01-28 02:37:53,730 | INFO     | exeerrorcode: 0
[2026-01-28 02:38:28] 2026-01-28 02:37:53,730 | INFO     | exeerrordiag: 
[2026-01-28 02:38:28] 2026-01-28 02:37:53,730 | INFO     | exitcode: 0
[2026-01-28 02:38:28] 2026-01-28 02:37:53,730 | INFO     | exitmsg: OK
[2026-01-28 02:38:28] 2026-01-28 02:37:53,730 | INFO     | cpuconsumptiontime: 25857 s
[2026-01-28 02:38:28] 2026-01-28 02:37:53,730 | INFO     | nevents: 400
[2026-01-28 02:38:28] 2026-01-28 02:37:53,730 | INFO     | neventsw: 0
[2026-01-28 02:38:28] 2026-01-28 02:37:53,731 | INFO     | pid: 1669830
[2026-01-28 02:38:28] 2026-01-28 02:37:53,731 | INFO     | pgrp: 1669830
[2026-01-28 02:38:28] 2026-01-28 02:37:53,731 | INFO     | corecount: 12
[2026-01-28 02:38:28] 2026-01-28 02:37:53,731 | INFO     | event service: False
[2026-01-28 02:38:28] 2026-01-28 02:37:53,731 | INFO     | sizes: {0: 2284258, 11: 2284258, 4830: 2310617, 4832: 2319717, 4835: 2319855}
[2026-01-28 02:38:28] 2026-01-28 02:37:53,731 | INFO     | --------------------------------------------------
[2026-01-28 02:38:28] 2026-01-28 02:37:53,731 | INFO     | 
[2026-01-28 02:38:28] 2026-01-28 02:37:53,731 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/0
[2026-01-28 02:38:28] 2026-01-28 02:37:53,906 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-28 02:38:28] 2026-01-28 02:37:53,906 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-28 02:38:28] 2026-01-28 02:37:53,906 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-28 02:38:28] 2026-01-28 02:37:53,906 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-28 02:38:28] 2026-01-28 02:37:53,906 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-28 02:38:28] 2026-01-28 02:37:53,906 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-28 02:38:28] 2026-01-28 02:37:53,906 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-28 02:38:28] 2026-01-28 02:37:53,906 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-28 02:38:28] 2026-01-28 02:37:53,906 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-28 02:38:28] 2026-01-28 02:37:53,906 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-28 02:38:28] 2026-01-28 02:37:53,906 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-28 02:38:28] 2026-01-28 02:37:53,906 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-28 02:38:28] 2026-01-28 02:37:53,907 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-28 02:38:28] 2026-01-28 02:37:53,907 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-28 02:38:28] 2026-01-28 02:37:53,907 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-28 02:38:28] 2026-01-28 02:37:53,907 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-28 02:38:28] 2026-01-28 02:37:53,907 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-28 02:38:28] 2026-01-28 02:37:53,907 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-28 02:38:28] 2026-01-28 02:37:53,907 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-28 02:38:28] 2026-01-28 02:37:53,907 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-28 02:38:28] 2026-01-28 02:37:53,907 | INFO     | job 6984229467 has completed (purged errors)
[2026-01-28 02:38:28] 2026-01-28 02:37:53,907 | INFO     | overall cleanup function is called
[2026-01-28 02:38:28] 2026-01-28 02:37:54,918 | INFO     | --- collectZombieJob: --- 10, [1669830]
[2026-01-28 02:38:28] 2026-01-28 02:37:54,918 | INFO     | zombie collector waiting for pid 1669830
[2026-01-28 02:38:28] 2026-01-28 02:37:54,918 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-28 02:38:28] 2026-01-28 02:37:54,918 | INFO     | collected zombie processes
[2026-01-28 02:38:28] 2026-01-28 02:37:54,918 | INFO     | will attempt to kill all subprocesses of pid=1669830
[2026-01-28 02:38:28] 2026-01-28 02:37:55,041 | INFO     | process IDs to be killed: [1669830] (in reverse order)
[2026-01-28 02:38:28] 2026-01-28 02:37:55,122 | WARNING  | found no corresponding commands to process id(s)
[2026-01-28 02:38:28] 2026-01-28 02:37:55,122 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-28 02:38:28] 2026-01-28 02:37:55,124 | INFO     | did not find any defunct processes belonging to 1669830
[2026-01-28 02:38:28] 2026-01-28 02:37:55,126 | INFO     | did not find any defunct processes belonging to 1669830
[2026-01-28 02:38:28] 2026-01-28 02:37:55,126 | INFO     | ready for new job
[2026-01-28 02:38:28] 2026-01-28 02:37:55,126 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-28 02:38:28] 2026-01-28 02:37:55,127 | INFO     | **************************************
[2026-01-28 02:38:28] 2026-01-28 02:37:55,127 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-28 02:38:28] 2026-01-28 02:37:55,127 | INFO     | **************************************
[2026-01-28 02:38:28] 2026-01-28 02:37:55,127 | INFO     | 
[2026-01-28 02:38:28] 2026-01-28 02:37:55,146 | INFO     | architecture information:
[2026-01-28 02:38:28] 2026-01-28 02:37:55,150 | INFO     | executing command: cat /etc/os-release
[2026-01-28 02:38:28] 2026-01-28 02:37:55,174 | INFO     | cat /etc/os-release:
[2026-01-28 02:38:28] NAME="CentOS Linux"
[2026-01-28 02:38:28] VERSION="7 (Core)"
[2026-01-28 02:38:28] ID="centos"
[2026-01-28 02:38:28] ID_LIKE="rhel fedora"
[2026-01-28 02:38:28] VERSION_ID="7"
[2026-01-28 02:38:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-28 02:38:28] ANSI_COLOR="0;31"
[2026-01-28 02:38:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-28 02:38:28] HOME_URL="https://www.centos.org/"
[2026-01-28 02:38:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-28 02:38:28] 
[2026-01-28 02:38:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-28 02:38:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-28 02:38:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-28 02:38:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-28 02:38:28] 
[2026-01-28 02:38:28] 2026-01-28 02:37:55,174 | INFO     | **************************************
[2026-01-28 02:38:28] 2026-01-28 02:37:55,682 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/0
[2026-01-28 02:38:28] 2026-01-28 02:37:55,750 | INFO     | sufficient remaining disk space (154813857792 B)
[2026-01-28 02:38:28] 2026-01-28 02:37:55,750 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-28 02:38:28] 2026-01-28 02:37:55,750 | INFO     | current server update state: UPDATING_FINAL
[2026-01-28 02:38:28] 2026-01-28 02:37:55,750 | INFO     | update_server=False
[2026-01-28 02:38:28] 2026-01-28 02:37:55,750 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-28 02:38:28] 2026-01-28 02:37:55,754 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-28 02:38:28] 2026-01-28 02:37:55,754 | INFO     | aborting loop
[2026-01-28 02:38:28] 2026-01-28 02:37:56,046 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-28 02:38:28] 2026-01-28 02:37:56,138 | INFO     | all job control threads have been joined
[2026-01-28 02:38:28] 2026-01-28 02:37:56,390 | INFO     | all data control threads have been joined
[2026-01-28 02:38:28] 2026-01-28 02:37:56,678 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-28 02:38:28] 2026-01-28 02:37:56,762 | INFO     | [job] retrieve thread has finished
[2026-01-28 02:38:28] 2026-01-28 02:37:56,766 | INFO     | [job] job monitor thread has finished
[2026-01-28 02:38:28] 2026-01-28 02:37:56,802 | INFO     | [data] copytool_in thread has finished
[2026-01-28 02:38:28] 2026-01-28 02:37:57,146 | INFO     | [job] control thread has finished
[2026-01-28 02:38:28] 2026-01-28 02:37:57,230 | INFO     | [payload] validate_post thread has finished
[2026-01-28 02:38:28] 2026-01-28 02:37:57,262 | INFO     | all payload control threads have been joined
[2026-01-28 02:38:28] 2026-01-28 02:37:57,398 | INFO     | [data] control thread has finished
[2026-01-28 02:38:28] 2026-01-28 02:37:57,398 | INFO     | [payload] failed_post thread has finished
[2026-01-28 02:38:28] 2026-01-28 02:37:57,546 | INFO     | [job] validate thread has finished
[2026-01-28 02:38:28] 2026-01-28 02:37:57,842 | INFO     | [payload] validate_pre thread has finished
[2026-01-28 02:38:28] 2026-01-28 02:37:57,926 | INFO     | [job] create_data_payload thread has finished
[2026-01-28 02:38:28] 2026-01-28 02:37:58,054 | INFO     | [payload] execute_payloads thread has finished
[2026-01-28 02:38:28] 2026-01-28 02:37:58,054 | INFO     | [data] copytool_out thread has finished
[2026-01-28 02:38:28] 2026-01-28 02:37:58,266 | INFO     | [payload] control thread has finished
[2026-01-28 02:38:28] 2026-01-28 02:37:58,750 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-28 02:38:28] 2026-01-28 02:37:59,758 | INFO     | [job] queue monitor thread has finished
[2026-01-28 02:38:28] 2026-01-28 02:38:00,698 | INFO     | [data] queue_monitor thread has finished
[2026-01-28 02:38:28] 2026-01-28 02:38:05,922 | INFO     | job.realtimelogging is not enabled
[2026-01-28 02:38:28] 2026-01-28 02:38:06,928 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-28 02:38:28] 2026-01-28 02:38:14,722 | INFO     | [monitor] cgroup control has ended
[2026-01-28 02:38:28] 2026-01-28 02:38:16,002 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140595055294272)>', '<ExcThread(monitor, started 140594836895488)>']
[2026-01-28 02:38:28] 2026-01-28 02:38:21,030 | INFO     | all workflow threads have been joined
[2026-01-28 02:38:28] 2026-01-28 02:38:21,030 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-28 02:38:28] 2026-01-28 02:38:21,030 | INFO     | traces error code: 0
[2026-01-28 02:38:28] 2026-01-28 02:38:21,030 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-28 02:38:28] 2026-01-28 02:38:26,581 | INFO     | PID=1665244 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-28 02:38:28] 2026-01-28 02:38:26,581 | INFO     | .. there are 3 such processes running
[2026-01-28 02:38:28] 2026-01-28 02:38:26,586 | INFO     | found 0 job(s) in 20 queues
[2026-01-28 02:38:28] 2026-01-28 02:38:26,586 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-28 02:38:28] 2026-01-28 02:38:26,586 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-28 02:38:28] 2026-01-28 02:38:26,586 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-28 02:38:28] 2026-01-28 02:38:26,586 | CRITICAL | thread 'MainThread' is not alive
[2026-01-28 02:38:28] 2026-01-28 02:38:26,586 | INFO     | [monitor] control thread has ended
[2026-01-28 02:38:28] 2026-01-28 02:38:26,874 [wrapper] ==== pilot stdout END ====
[2026-01-28 02:38:28] 2026-01-28 02:38:26,894 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-28 02:38:28] 2026-01-28 02:38:26,918 [wrapper] pilotpid: 1665244
[2026-01-28 02:38:28] 2026-01-28 02:38:26,942 [wrapper] Pilot exit status: 0
[2026-01-28 02:38:28] 2026-01-28 02:38:27,030 [wrapper] pandaids: 6984229467
[2026-01-28 02:38:28] 2026-01-28 02:38:27,141 [wrapper] cleanup supervisor_pilot 1691137 1665245
[2026-01-28 02:38:28] 2026-01-28 02:38:27,144 [wrapper] Test setup, not cleaning
[2026-01-28 02:38:28] 2026-01-28 02:38:27,145 [wrapper] apfmon messages muted
[2026-01-28 02:38:28] 2026-01-28 02:38:27,206 [wrapper] ==== wrapper stdout END ====
[2026-01-28 02:38:28] 2026-01-28 02:38:27,222 [wrapper] ==== wrapper stderr END ====
[2026-01-28 02:38:28]  *** Error codes and diagnostics ***
[2026-01-28 02:38:28]     "exeErrorCode": 0,
[2026-01-28 02:38:28]     "exeErrorDiag": "",
[2026-01-28 02:38:28]     "pilotErrorCode": 0,
[2026-01-28 02:38:28]     "pilotErrorDiag": "",
[2026-01-28 02:38:28]  *** Listing of results directory ***
[2026-01-28 02:38:28] total 678972
[2026-01-28 02:38:28] -rw-r--r-- 1 boinc boinc    584422 Jan 26 11:54 pilot3.tar.gz
[2026-01-28 02:38:28] -rwx------ 1 boinc boinc     36322 Jan 26 11:57 runpilot2-wrapper.sh
[2026-01-28 02:38:28] -rw-r--r-- 1 boinc boinc      5111 Jan 26 12:00 queuedata.json
[2026-01-28 02:38:28] -rw-rw-r-- 1 boinc boinc       100 Jan 28 01:16 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-28 02:38:28] -rwxr-xr-x 1 boinc boinc      7986 Jan 28 01:16 run_atlas
[2026-01-28 02:38:28] -rw-rw-r-- 1 boinc boinc       105 Jan 28 01:16 job.xml
[2026-01-28 02:38:28] -rw-r--r-- 2 boinc boinc     15845 Jan 28 01:17 start_atlas.sh
[2026-01-28 02:38:28] drwxrwx--x 2 boinc boinc      4096 Jan 28 01:17 shared
[2026-01-28 02:38:28] -rw-r--r-- 2 boinc boinc    597760 Jan 28 01:17 input.tar.gz
[2026-01-28 02:38:28] -rw-rw-r-- 1 boinc boinc      6935 Jan 28 01:17 init_data.xml
[2026-01-28 02:38:28] -rw-r--r-- 2 boinc boinc 503549172 Jan 28 01:17 EVNT.48317949._000030.pool.root.1
[2026-01-28 02:38:28] -rw-rw-r-- 1 boinc boinc         0 Jan 28 01:17 boinc_setup_complete
[2026-01-28 02:38:28] -rw-rw-r-- 1 boinc boinc         0 Jan 28 01:17 boinc_lockfile
[2026-01-28 02:38:28] -rw-rw-r-- 1 boinc boinc      2518 Jan 28 01:17 pandaJob.out
[2026-01-28 02:38:28] -rw------- 1 boinc boinc   1005240 Jan 28 01:17 agis_schedconf.cvmfs.json
[2026-01-28 02:38:28] -rw------- 1 boinc boinc   1516246 Jan 28 01:17 agis_ddmendpoints.agis.ALL.json
[2026-01-28 02:38:28] -rw------- 1 boinc boinc       412 Jan 28 01:17 workernode_map.json
[2026-01-28 02:38:28] drwx------ 5 boinc boinc      4096 Jan 28 01:17 pilot3
[2026-01-28 02:38:28] -rw------- 1 boinc boinc 185525487 Jan 28 02:37 HITS.48317952._001487.pool.root.1
[2026-01-28 02:38:28] -rw-rw-r-- 1 boinc boinc       530 Jan 28 02:37 boinc_task_state.xml
[2026-01-28 02:38:28] -rw------- 1 boinc boinc      1016 Jan 28 02:37 memory_monitor_summary.json
[2026-01-28 02:38:28] -rw------- 1 boinc boinc    390657 Jan 28 02:37 log.48317952._001487.job.log.tgz.1
[2026-01-28 02:38:28] -rw------- 1 boinc boinc      6267 Jan 28 02:37 heartbeat.json
[2026-01-28 02:38:28] -rw-rw-r-- 1 boinc boinc        27 Jan 28 02:37 wrapper_checkpoint.txt
[2026-01-28 02:38:28] -rw------- 1 boinc boinc       892 Jan 28 02:38 pilotlog.txt
[2026-01-28 02:38:28] -rw------- 1 boinc boinc        95 Jan 28 02:38 pilot_heartbeat.json
[2026-01-28 02:38:28] -rw------- 1 boinc boinc    736041 Jan 28 02:38 log.48317952._001487.job.log.1
[2026-01-28 02:38:28] -rw------- 1 boinc boinc       357 Jan 28 02:38 output.list
[2026-01-28 02:38:28] -rw-rw-r-- 1 boinc boinc       620 Jan 28 02:38 runtime_log
[2026-01-28 02:38:28] -rw------- 1 boinc boinc   1146880 Jan 28 02:38 result.tar.gz
[2026-01-28 02:38:28] -rw------- 1 boinc boinc       648 Jan 28 02:38 Y9KODmsOa48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmdH3KDmnQArEo.diag
[2026-01-28 02:38:28] -rw-rw-r-- 1 boinc boinc      9156 Jan 28 02:38 runtime_log.err
[2026-01-28 02:38:28] -rw-rw-r-- 1 boinc boinc      8192 Jan 28 02:38 boinc_mmap_file
[2026-01-28 02:38:28] -rw-rw-r-- 1 boinc boinc     21310 Jan 28 02:38 stderr.txt
[2026-01-28 02:38:28] HITS file was successfully produced:
[2026-01-28 02:38:28] -rw------- 1 boinc boinc 185525487 Jan 28 02:37 shared/HITS.pool.root.1
[2026-01-28 02:38:28]  *** Contents of shared directory: ***
[2026-01-28 02:38:28] total 674656
[2026-01-28 02:38:28] -rw-r--r-- 2 boinc boinc     15845 Jan 28 01:17 start_atlas.sh
[2026-01-28 02:38:28] -rw-r--r-- 2 boinc boinc    597760 Jan 28 01:17 input.tar.gz
[2026-01-28 02:38:28] -rw-r--r-- 2 boinc boinc 503549172 Jan 28 01:17 ATLAS.root_0
[2026-01-28 02:38:28] -rw------- 1 boinc boinc 185525487 Jan 28 02:37 HITS.pool.root.1
[2026-01-28 02:38:28] -rw------- 1 boinc boinc   1146880 Jan 28 02:38 result.tar.gz
02:38:29 (1661420): run_atlas exited; CPU time 25879.279343
02:38:29 (1661420): called boinc_finish(0)

</stderr_txt>
]]>

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