Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
23:44:18 (1621058): wrapper (7.7.26015): starting
23:44:18 (1621058): wrapper: running run_atlas (--nthreads 12)
[2026-01-27 23:44:18] Arguments: --nthreads 12
[2026-01-27 23:44:18] Threads: 12
[2026-01-27 23:44:18] Checking for CVMFS
[2026-01-27 23:44:19] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-27 23:44:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-27 23:44:23] Running cvmfs_config stat atlas.cern.ch
[2026-01-27 23:44:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-27 23:44:24] 2.13.1.0 2787 3369 72392 155604 0 50 2932859 4096001 1824 130560 0 4803687 99.957 355437 1144 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2026-01-27 23:44:24] CVMFS is ok
[2026-01-27 23:44:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-27 23:44:24] Checking for apptainer binary...
[2026-01-27 23:44:24] apptainer is not installed, using version from CVMFS
[2026-01-27 23:44:24] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-27 23:44:26] ryzen7
[2026-01-27 23:44:26] apptainer works
[2026-01-27 23:44:26] Set ATHENA_PROC_NUMBER=12
[2026-01-27 23:44:26] Set ATHENA_CORE_NUMBER=12
[2026-01-27 23:44:27] Starting ATLAS job with PandaID=6984228871
[2026-01-27 23:44:27] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-28 01:15:11]  *** The last 200 lines of the pilot log: ***
[2026-01-28 01:15:11]  is_tar=False
[2026-01-28 01:15:11]  lfn=log.48317952._001335.job.log.tgz.1
[2026-01-28 01:15:11]  mtime=0
[2026-01-28 01:15:11]  protocol_id=None
[2026-01-28 01:15:11]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-28 01:15:11]  replicas=None
[2026-01-28 01:15:11]  scope=mc23_13p6TeV
[2026-01-28 01:15:11]  status=None
[2026-01-28 01:15:11]  status_code=0
[2026-01-28 01:15:11]  storage_token=
[2026-01-28 01:15:11]  surl=/opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6984228871/log.48317952._001335.job.log.tgz.1
[2026-01-28 01:15:11]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3a/66/log.48317952._001335.job.log.tgz.1
[2026-01-28 01:15:11]  workdir=None
[2026-01-28 01:15:11] ]
[2026-01-28 01:15:11] 2026-01-28 01:14:34,078 | INFO     | transferring file log.48317952._001335.job.log.tgz.1 from /opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6984228871/log.48317952._001335.job.log.tgz.1 t
[2026-01-28 01:15:11] 2026-01-28 01:14:34,078 | INFO     | executing command: /usr/bin/env mv /opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6984228871/log.48317952._001335.job.log.tgz.1 /opt/boinc/instance_home
[2026-01-28 01:15:11] 2026-01-28 01:14:34,290 | INFO     | adding to output.list: log.48317952._001335.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3a/66/log.48317952._001335.job.log.tg
[2026-01-28 01:15:11] 2026-01-28 01:14:34,290 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-28 01:15:11] 2026-01-28 01:14:34,290 | INFO     | summary of transferred files:
[2026-01-28 01:15:11] 2026-01-28 01:14:34,291 | INFO     |  -- lfn=log.48317952._001335.job.log.tgz.1, status_code=0, status=transferred
[2026-01-28 01:15:11] 2026-01-28 01:14:34,291 | INFO     | stage-out finished correctly
[2026-01-28 01:15:11] 2026-01-28 01:14:34,450 | INFO     | time since job start (5262s) is within the limit (349056.0s)
[2026-01-28 01:15:11] 2026-01-28 01:14:34,522 | INFO     | monitor loop #411: job 0:6984228871 is in state 'finished'
[2026-01-28 01:15:11] 2026-01-28 01:14:34,522 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-28 01:15:11] 2026-01-28 01:14:36,430 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-28 01:15:11] 2026-01-28 01:14:36,474 | INFO     | time since job start (5264s) is within the limit (349056.0s)
[2026-01-28 01:15:11] 2026-01-28 01:14:37,046 | INFO     | monitor loop #412: job 0:6984228871 is in state 'finished'
[2026-01-28 01:15:11] 2026-01-28 01:14:37,046 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-28 01:15:11] 2026-01-28 01:14:38,486 | INFO     | time since job start (5266s) is within the limit (349056.0s)
[2026-01-28 01:15:11] 2026-01-28 01:14:38,582 | INFO     | job 6984228871 has state=finished
[2026-01-28 01:15:11] 2026-01-28 01:14:38,582 | INFO     | preparing for final server update for job 6984228871 in state='finished'
[2026-01-28 01:15:11] 2026-01-28 01:14:38,582 | INFO     | reading metadata from: /opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6984228871/jobReport.json
[2026-01-28 01:15:11] 2026-01-28 01:14:38,583 | INFO     | added worker_node to metadata from /opt/boinc/instance_homes/boinc_31417/slots/2/workernode_map.json
[2026-01-28 01:15:11] 2026-01-28 01:14:38,584 | INFO     | this job has now completed (state=finished)
[2026-01-28 01:15:11] 2026-01-28 01:14:38,584 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-28 01:15:11] 2026-01-28 01:14:38,584 | INFO     | log transfer has been attempted: DONE
[2026-01-28 01:15:11] 2026-01-28 01:14:38,584 | INFO     | job 6984228871 has finished - writing final server update
[2026-01-28 01:15:11] 2026-01-28 01:14:38,584 | INFO     | total number of processed events: 400 (read)
[2026-01-28 01:15:11] 2026-01-28 01:14:38,612 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/2/PanDA_Pilot-6984228871/memory_monitor_summary.json (trf name=prmon)
[2026-01-28 01:15:11] 2026-01-28 01:14:38,612 | INFO     | extracted standard info from prmon json
[2026-01-28 01:15:11] 2026-01-28 01:14:38,612 | INFO     | extracted standard memory fields from prmon json
[2026-01-28 01:15:11] 2026-01-28 01:14:38,612 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-28 01:15:11] 2026-01-28 01:14:38,612 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-28 01:15:11] 2026-01-28 01:14:38,612 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-28 01:15:11] 2026-01-28 01:14:38,613 | INFO     | fitting pss+swap vs Time
[2026-01-28 01:15:11] 2026-01-28 01:14:38,613 | INFO     | sum of square deviations: 147126479.5
[2026-01-28 01:15:11] 2026-01-28 01:14:38,614 | INFO     | sum of deviations: -9380312240.5
[2026-01-28 01:15:11] 2026-01-28 01:14:38,614 | INFO     | mean x: 1769560366.5
[2026-01-28 01:15:11] 2026-01-28 01:14:38,614 | INFO     | mean y: 2764165.3205128205
[2026-01-28 01:15:11] 2026-01-28 01:14:38,614 | INFO     | intersect: 112824255052.57861
[2026-01-28 01:15:11] 2026-01-28 01:14:38,614 | INFO     | chi2: 0.049177938261443184
[2026-01-28 01:15:11] 2026-01-28 01:14:38,614 | INFO     | current memory leak: -63.76 B/s (using 78 data points, chi2=0.05)
[2026-01-28 01:15:11] 2026-01-28 01:14:38,614 | INFO     | could have reported an average CPU frequency of 4299 MHz (6 samples)
[2026-01-28 01:15:11] 2026-01-28 01:14:38,614 | INFO     | ..............................
[2026-01-28 01:15:11] 2026-01-28 01:14:38,614 | INFO     | . Timing measurements:
[2026-01-28 01:15:11] 2026-01-28 01:14:38,614 | INFO     | . get job = 0 s
[2026-01-28 01:15:11] 2026-01-28 01:14:38,615 | INFO     | . initial setup = 53 s
[2026-01-28 01:15:11] 2026-01-28 01:14:38,615 | INFO     | . payload setup = 58 s
[2026-01-28 01:15:11] 2026-01-28 01:14:38,615 | INFO     | . stage-in = 0 s
[2026-01-28 01:15:11] 2026-01-28 01:14:38,615 | INFO     | . payload execution = 5196 s
[2026-01-28 01:15:11] 2026-01-28 01:14:38,615 | INFO     | . stage-out = 2 s
[2026-01-28 01:15:11] 2026-01-28 01:14:38,615 | INFO     | . log creation = 1 s
[2026-01-28 01:15:11] 2026-01-28 01:14:38,615 | INFO     | ..............................
[2026-01-28 01:15:11] 2026-01-28 01:14:38,735 | INFO     | 
[2026-01-28 01:15:11] 2026-01-28 01:14:38,735 | INFO     | job summary report
[2026-01-28 01:15:11] 2026-01-28 01:14:38,735 | INFO     | --------------------------------------------------
[2026-01-28 01:15:11] 2026-01-28 01:14:38,735 | INFO     | PanDA job id: 6984228871
[2026-01-28 01:15:11] 2026-01-28 01:14:38,735 | INFO     | task id: 48317952
[2026-01-28 01:15:11] 2026-01-28 01:14:38,735 | INFO     | errors: (none)
[2026-01-28 01:15:11] 2026-01-28 01:14:38,735 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-28 01:15:11] 2026-01-28 01:14:38,735 | INFO     | pilot state: finished 
[2026-01-28 01:15:11] 2026-01-28 01:14:38,735 | INFO     | transexitcode: 0
[2026-01-28 01:15:11] 2026-01-28 01:14:38,735 | INFO     | exeerrorcode: 0
[2026-01-28 01:15:11] 2026-01-28 01:14:38,735 | INFO     | exeerrordiag: 
[2026-01-28 01:15:11] 2026-01-28 01:14:38,736 | INFO     | exitcode: 0
[2026-01-28 01:15:11] 2026-01-28 01:14:38,736 | INFO     | exitmsg: OK
[2026-01-28 01:15:11] 2026-01-28 01:14:38,736 | INFO     | cpuconsumptiontime: 26987 s
[2026-01-28 01:15:11] 2026-01-28 01:14:38,736 | INFO     | nevents: 400
[2026-01-28 01:15:11] 2026-01-28 01:14:38,736 | INFO     | neventsw: 0
[2026-01-28 01:15:11] 2026-01-28 01:14:38,736 | INFO     | pid: 1629654
[2026-01-28 01:15:11] 2026-01-28 01:14:38,736 | INFO     | pgrp: 1629654
[2026-01-28 01:15:11] 2026-01-28 01:14:38,736 | INFO     | corecount: 12
[2026-01-28 01:15:11] 2026-01-28 01:14:38,736 | INFO     | event service: False
[2026-01-28 01:15:11] 2026-01-28 01:14:38,736 | INFO     | sizes: {0: 2273825, 1: 2284286, 5258: 2310709, 5261: 2319753, 5263: 2319809, 5265: 2320003}
[2026-01-28 01:15:11] 2026-01-28 01:14:38,736 | INFO     | --------------------------------------------------
[2026-01-28 01:15:11] 2026-01-28 01:14:38,736 | INFO     | 
[2026-01-28 01:15:11] 2026-01-28 01:14:38,736 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/2
[2026-01-28 01:15:11] 2026-01-28 01:14:39,026 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-28 01:15:11] 2026-01-28 01:14:39,026 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-28 01:15:11] 2026-01-28 01:14:39,026 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-28 01:15:11] 2026-01-28 01:14:39,026 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-28 01:15:11] 2026-01-28 01:14:39,026 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-28 01:15:11] 2026-01-28 01:14:39,026 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-28 01:15:11] 2026-01-28 01:14:39,026 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-28 01:15:11] 2026-01-28 01:14:39,026 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-28 01:15:11] 2026-01-28 01:14:39,026 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-28 01:15:11] 2026-01-28 01:14:39,026 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-28 01:15:11] 2026-01-28 01:14:39,027 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-28 01:15:11] 2026-01-28 01:14:39,027 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-28 01:15:11] 2026-01-28 01:14:39,027 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-28 01:15:11] 2026-01-28 01:14:39,027 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-28 01:15:11] 2026-01-28 01:14:39,027 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-28 01:15:11] 2026-01-28 01:14:39,027 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-28 01:15:11] 2026-01-28 01:14:39,027 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-28 01:15:11] 2026-01-28 01:14:39,027 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-28 01:15:11] 2026-01-28 01:14:39,027 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-28 01:15:11] 2026-01-28 01:14:39,027 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-28 01:15:11] 2026-01-28 01:14:39,027 | INFO     | job 6984228871 has completed (purged errors)
[2026-01-28 01:15:11] 2026-01-28 01:14:39,027 | INFO     | overall cleanup function is called
[2026-01-28 01:15:11] 2026-01-28 01:14:40,038 | INFO     | --- collectZombieJob: --- 10, [1629654]
[2026-01-28 01:15:11] 2026-01-28 01:14:40,038 | INFO     | zombie collector waiting for pid 1629654
[2026-01-28 01:15:11] 2026-01-28 01:14:40,038 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-28 01:15:11] 2026-01-28 01:14:40,038 | INFO     | collected zombie processes
[2026-01-28 01:15:11] 2026-01-28 01:14:40,038 | INFO     | will attempt to kill all subprocesses of pid=1629654
[2026-01-28 01:15:11] 2026-01-28 01:14:40,166 | INFO     | process IDs to be killed: [1629654] (in reverse order)
[2026-01-28 01:15:11] 2026-01-28 01:14:40,610 | WARNING  | found no corresponding commands to process id(s)
[2026-01-28 01:15:11] 2026-01-28 01:14:40,610 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-28 01:15:11] 2026-01-28 01:14:40,612 | INFO     | did not find any defunct processes belonging to 1629654
[2026-01-28 01:15:11] 2026-01-28 01:14:40,614 | INFO     | did not find any defunct processes belonging to 1629654
[2026-01-28 01:15:11] 2026-01-28 01:14:40,614 | INFO     | ready for new job
[2026-01-28 01:15:11] 2026-01-28 01:14:40,614 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-28 01:15:11] 2026-01-28 01:14:40,615 | INFO     | **************************************
[2026-01-28 01:15:11] 2026-01-28 01:14:40,615 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-28 01:15:11] 2026-01-28 01:14:40,615 | INFO     | **************************************
[2026-01-28 01:15:11] 2026-01-28 01:14:40,615 | INFO     | 
[2026-01-28 01:15:11] 2026-01-28 01:14:40,638 | INFO     | architecture information:
[2026-01-28 01:15:11] 2026-01-28 01:14:40,638 | INFO     | executing command: cat /etc/os-release
[2026-01-28 01:15:11] 2026-01-28 01:14:40,782 | INFO     | cat /etc/os-release:
[2026-01-28 01:15:11] NAME="CentOS Linux"
[2026-01-28 01:15:11] VERSION="7 (Core)"
[2026-01-28 01:15:11] ID="centos"
[2026-01-28 01:15:11] ID_LIKE="rhel fedora"
[2026-01-28 01:15:11] VERSION_ID="7"
[2026-01-28 01:15:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-28 01:15:11] ANSI_COLOR="0;31"
[2026-01-28 01:15:11] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-28 01:15:11] HOME_URL="https://www.centos.org/"
[2026-01-28 01:15:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-28 01:15:11] 
[2026-01-28 01:15:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-28 01:15:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-28 01:15:11] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-28 01:15:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-28 01:15:11] 
[2026-01-28 01:15:11] 2026-01-28 01:14:40,782 | INFO     | **************************************
[2026-01-28 01:15:11] 2026-01-28 01:14:41,286 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/2
[2026-01-28 01:15:11] 2026-01-28 01:14:41,410 | INFO     | sufficient remaining disk space (152934809600 B)
[2026-01-28 01:15:11] 2026-01-28 01:14:41,411 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-28 01:15:11] 2026-01-28 01:14:41,411 | INFO     | current server update state: UPDATING_FINAL
[2026-01-28 01:15:11] 2026-01-28 01:14:41,411 | INFO     | update_server=False
[2026-01-28 01:15:11] 2026-01-28 01:14:41,411 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-28 01:15:11] 2026-01-28 01:14:41,414 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-28 01:15:11] 2026-01-28 01:14:41,414 | INFO     | aborting loop
[2026-01-28 01:15:11] 2026-01-28 01:14:41,862 | INFO     | all data control threads have been joined
[2026-01-28 01:15:11] 2026-01-28 01:14:42,330 | INFO     | all job control threads have been joined
[2026-01-28 01:15:11] 2026-01-28 01:14:42,402 | INFO     | all payload control threads have been joined
[2026-01-28 01:15:11] 2026-01-28 01:14:42,418 | INFO     | [job] retrieve thread has finished
[2026-01-28 01:15:11] 2026-01-28 01:14:42,422 | INFO     | [job] job monitor thread has finished
[2026-01-28 01:15:11] 2026-01-28 01:14:42,450 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-28 01:15:11] 2026-01-28 01:14:42,506 | INFO     | [job] validate thread has finished
[2026-01-28 01:15:11] 2026-01-28 01:14:42,586 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-28 01:15:11] 2026-01-28 01:14:42,702 | INFO     | [job] create_data_payload thread has finished
[2026-01-28 01:15:11] 2026-01-28 01:14:42,850 | INFO     | [payload] execute_payloads thread has finished
[2026-01-28 01:15:11] 2026-01-28 01:14:42,866 | INFO     | [data] control thread has finished
[2026-01-28 01:15:11] 2026-01-28 01:14:43,142 | INFO     | [data] copytool_in thread has finished
[2026-01-28 01:15:11] 2026-01-28 01:14:43,322 | INFO     | [payload] validate_pre thread has finished
[2026-01-28 01:15:11] 2026-01-28 01:14:43,338 | INFO     | [job] control thread has finished
[2026-01-28 01:15:11] 2026-01-28 01:14:43,410 | INFO     | [payload] control thread has finished
[2026-01-28 01:15:11] 2026-01-28 01:14:43,590 | INFO     | [payload] validate_post thread has finished
[2026-01-28 01:15:11] 2026-01-28 01:14:43,766 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-28 01:15:11] 2026-01-28 01:14:43,874 | INFO     | [payload] failed_post thread has finished
[2026-01-28 01:15:11] 2026-01-28 01:14:44,462 | INFO     | [data] copytool_out thread has finished
[2026-01-28 01:15:11] 2026-01-28 01:14:44,774 | INFO     | [job] queue monitor thread has finished
[2026-01-28 01:15:11] 2026-01-28 01:14:46,606 | INFO     | [data] queue_monitor thread has finished
[2026-01-28 01:15:11] 2026-01-28 01:14:51,522 | INFO     | job.realtimelogging is not enabled
[2026-01-28 01:15:11] 2026-01-28 01:14:52,530 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-28 01:15:11] 2026-01-28 01:15:00,251 | INFO     | [monitor] cgroup control has ended
[2026-01-28 01:15:11] 2026-01-28 01:15:02,050 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140019144628032)>', '<ExcThread(monitor, started 140018483984128)>']
[2026-01-28 01:15:11] 2026-01-28 01:15:07,078 | INFO     | all workflow threads have been joined
[2026-01-28 01:15:11] 2026-01-28 01:15:07,078 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-28 01:15:11] 2026-01-28 01:15:07,078 | INFO     | traces error code: 0
[2026-01-28 01:15:11] 2026-01-28 01:15:07,078 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-28 01:15:11] 2026-01-28 01:15:11,632 | INFO     | PID=1625167 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-28 01:15:11] 2026-01-28 01:15:11,634 | INFO     | .. there are 3 such processes running
[2026-01-28 01:15:11] 2026-01-28 01:15:11,634 | INFO     | found 0 job(s) in 20 queues
[2026-01-28 01:15:11] 2026-01-28 01:15:11,634 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-28 01:15:11] 2026-01-28 01:15:11,634 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-28 01:15:11] 2026-01-28 01:15:11,634 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-28 01:15:11] 2026-01-28 01:15:11,634 | CRITICAL | thread 'MainThread' is not alive
[2026-01-28 01:15:11] 2026-01-28 01:15:11,634 | INFO     | [monitor] control thread has ended
[2026-01-28 01:15:11] 2026-01-28 01:15:11,682 [wrapper] ==== pilot stdout END ====
[2026-01-28 01:15:11] 2026-01-28 01:15:11,683 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-28 01:15:11] 2026-01-28 01:15:11,685 [wrapper] pilotpid: 1625167
[2026-01-28 01:15:11] 2026-01-28 01:15:11,686 [wrapper] Pilot exit status: 0
[2026-01-28 01:15:11] 2026-01-28 01:15:11,692 [wrapper] pandaids: 6984228871
[2026-01-28 01:15:11] 2026-01-28 01:15:11,713 [wrapper] cleanup supervisor_pilot 1647949 1625168
[2026-01-28 01:15:11] 2026-01-28 01:15:11,714 [wrapper] Test setup, not cleaning
[2026-01-28 01:15:11] 2026-01-28 01:15:11,716 [wrapper] apfmon messages muted
[2026-01-28 01:15:11] 2026-01-28 01:15:11,717 [wrapper] ==== wrapper stdout END ====
[2026-01-28 01:15:11] 2026-01-28 01:15:11,719 [wrapper] ==== wrapper stderr END ====
[2026-01-28 01:15:11]  *** Error codes and diagnostics ***
[2026-01-28 01:15:11]     "exeErrorCode": 0,
[2026-01-28 01:15:11]     "exeErrorDiag": "",
[2026-01-28 01:15:11]     "pilotErrorCode": 0,
[2026-01-28 01:15:11]     "pilotErrorDiag": "",
[2026-01-28 01:15:11]  *** Listing of results directory ***
[2026-01-28 01:15:11] total 679396
[2026-01-28 01:15:11] -rw-r--r-- 1 boinc boinc    584422 Jan 26 11:54 pilot3.tar.gz
[2026-01-28 01:15:11] -rwx------ 1 boinc boinc     36322 Jan 26 11:57 runpilot2-wrapper.sh
[2026-01-28 01:15:11] -rw-r--r-- 1 boinc boinc      5111 Jan 26 12:00 queuedata.json
[2026-01-28 01:15:11] -rw-rw-r-- 1 boinc boinc       100 Jan 27 23:44 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-28 01:15:11] -rwxr-xr-x 1 boinc boinc      7986 Jan 27 23:44 run_atlas
[2026-01-28 01:15:11] -rw-rw-r-- 1 boinc boinc       105 Jan 27 23:44 job.xml
[2026-01-28 01:15:11] -rw-r--r-- 2 boinc boinc     15845 Jan 27 23:44 start_atlas.sh
[2026-01-28 01:15:11] drwxrwx--x 2 boinc boinc      4096 Jan 27 23:44 shared
[2026-01-28 01:15:11] -rw-r--r-- 2 boinc boinc    597757 Jan 27 23:44 input.tar.gz
[2026-01-28 01:15:11] -rw-rw-r-- 1 boinc boinc      6935 Jan 27 23:44 init_data.xml
[2026-01-28 01:15:11] -rw-r--r-- 2 boinc boinc 499591984 Jan 27 23:44 EVNT.48317949._000027.pool.root.1
[2026-01-28 01:15:11] -rw-rw-r-- 1 boinc boinc         0 Jan 27 23:44 boinc_setup_complete
[2026-01-28 01:15:11] -rw-rw-r-- 1 boinc boinc         0 Jan 27 23:44 boinc_lockfile
[2026-01-28 01:15:11] -rw-rw-r-- 1 boinc boinc      2518 Jan 27 23:44 pandaJob.out
[2026-01-28 01:15:11] -rw------- 1 boinc boinc   1005240 Jan 27 23:45 agis_schedconf.cvmfs.json
[2026-01-28 01:15:11] -rw------- 1 boinc boinc   1516246 Jan 27 23:46 agis_ddmendpoints.agis.ALL.json
[2026-01-28 01:15:11] -rw------- 1 boinc boinc       419 Jan 27 23:46 workernode_map.json
[2026-01-28 01:15:11] drwx------ 5 boinc boinc      4096 Jan 27 23:46 pilot3
[2026-01-28 01:15:11] -rw------- 1 boinc boinc 189795696 Jan 28 01:13 HITS.48317952._001335.pool.root.1
[2026-01-28 01:15:11] -rw-rw-r-- 1 boinc boinc       530 Jan 28 01:14 boinc_task_state.xml
[2026-01-28 01:15:11] -rw------- 1 boinc boinc      1015 Jan 28 01:14 memory_monitor_summary.json
[2026-01-28 01:15:11] -rw------- 1 boinc boinc    391003 Jan 28 01:14 log.48317952._001335.job.log.tgz.1
[2026-01-28 01:15:11] -rw------- 1 boinc boinc      6279 Jan 28 01:14 heartbeat.json
[2026-01-28 01:15:11] -rw------- 1 boinc boinc       892 Jan 28 01:15 pilotlog.txt
[2026-01-28 01:15:11] -rw------- 1 boinc boinc        95 Jan 28 01:15 pilot_heartbeat.json
[2026-01-28 01:15:11] -rw-rw-r-- 1 boinc boinc      8192 Jan 28 01:15 boinc_mmap_file
[2026-01-28 01:15:11] -rw-rw-r-- 1 boinc boinc        27 Jan 28 01:15 wrapper_checkpoint.txt
[2026-01-28 01:15:11] -rw------- 1 boinc boinc    795173 Jan 28 01:15 log.48317952._001335.job.log.1
[2026-01-28 01:15:11] -rw------- 1 boinc boinc       357 Jan 28 01:15 output.list
[2026-01-28 01:15:11] -rw-rw-r-- 1 boinc boinc       620 Jan 28 01:15 runtime_log
[2026-01-28 01:15:11] -rw------- 1 boinc boinc   1208320 Jan 28 01:15 result.tar.gz
[2026-01-28 01:15:11] -rw------- 1 boinc boinc       648 Jan 28 01:15 T4qNDmsOa48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmGH3KDmAktDUo.diag
[2026-01-28 01:15:11] -rw-rw-r-- 1 boinc boinc      9156 Jan 28 01:15 runtime_log.err
[2026-01-28 01:15:11] -rw-rw-r-- 1 boinc boinc     21379 Jan 28 01:15 stderr.txt
[2026-01-28 01:15:11] HITS file was successfully produced:
[2026-01-28 01:15:11] -rw------- 1 boinc boinc 189795696 Jan 28 01:13 shared/HITS.pool.root.1
[2026-01-28 01:15:11]  *** Contents of shared directory: ***
[2026-01-28 01:15:11] total 675020
[2026-01-28 01:15:11] -rw-r--r-- 2 boinc boinc     15845 Jan 27 23:44 start_atlas.sh
[2026-01-28 01:15:11] -rw-r--r-- 2 boinc boinc    597757 Jan 27 23:44 input.tar.gz
[2026-01-28 01:15:11] -rw-r--r-- 2 boinc boinc 499591984 Jan 27 23:44 ATLAS.root_0
[2026-01-28 01:15:11] -rw------- 1 boinc boinc 189795696 Jan 28 01:13 HITS.pool.root.1
[2026-01-28 01:15:11] -rw------- 1 boinc boinc   1208320 Jan 28 01:15 result.tar.gz
01:15:13 (1621058): run_atlas exited; CPU time 27016.208607
01:15:13 (1621058): called boinc_finish(0)

</stderr_txt>
]]>

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