Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:39:34 (1870426): wrapper (7.7.26015): starting
08:39:34 (1870426): wrapper: running run_atlas (--nthreads 4)
[2026-01-27 08:39:34] Arguments: --nthreads 4
[2026-01-27 08:39:34] Threads: 4
[2026-01-27 08:39:34] Checking for CVMFS
[2026-01-27 08:39:34] No cvmfs_config command found, will try listing directly
[2026-01-27 08:39:34] CVMFS is ok
[2026-01-27 08:39:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-27 08:39:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-27 08:39:34] Further information can be found at the LHC@home message board.
[2026-01-27 08:39:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-27 08:39:34] Checking for apptainer binary...
[2026-01-27 08:39:34] which: no apptainer in ((null))
[2026-01-27 08:39:34] apptainer is not installed, using version from CVMFS
[2026-01-27 08:39:34] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-27 08:39:35] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot92/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2026-01-27 08:39:35] apptainer works
[2026-01-27 08:39:35] Set ATHENA_PROC_NUMBER=4
[2026-01-27 08:39:35] Set ATHENA_CORE_NUMBER=4
[2026-01-27 08:39:35] Starting ATLAS job with PandaID=6983304303
[2026-01-27 08:39:35] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot92/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 11:44:12]  *** The last 200 lines of the pilot log: ***
[2026-01-27 11:44:12] 2026-01-27 10:41:32,028 | INFO     | job 6983304303 has state=finished
[2026-01-27 11:44:12] 2026-01-27 10:41:32,028 | INFO     | preparing for final server update for job 6983304303 in state='finished'
[2026-01-27 11:44:12] 2026-01-27 10:41:32,029 | INFO     | reading metadata from: /scratch/boinc/var/slot92/slots/0/PanDA_Pilot-6983304303/jobReport.json
[2026-01-27 11:44:12] 2026-01-27 10:41:32,031 | INFO     | added worker_node to metadata from /scratch/boinc/var/slot92/slots/0/workernode_map.json
[2026-01-27 11:44:12] 2026-01-27 10:41:32,031 | INFO     | this job has now completed (state=finished)
[2026-01-27 11:44:12] 2026-01-27 10:41:32,031 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-27 11:44:12] 2026-01-27 10:41:32,032 | INFO     | log transfer has been attempted: DONE
[2026-01-27 11:44:12] 2026-01-27 10:41:32,032 | INFO     | job 6983304303 has finished - writing final server update
[2026-01-27 11:44:12] 2026-01-27 10:41:32,032 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1631746/.job.ad'
[2026-01-27 11:44:12] 2026-01-27 10:41:32,032 | INFO     | total number of processed events: 400 (read)
[2026-01-27 11:44:12] 2026-01-27 10:41:32,045 | INFO     | time since job start (10896s) is within the limit (349056.0s)
[2026-01-27 11:44:12] 2026-01-27 10:41:32,056 | INFO     | using path: /scratch/boinc/var/slot92/slots/0/PanDA_Pilot-6983304303/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 11:44:12] 2026-01-27 10:41:32,056 | INFO     | extracted standard info from prmon json
[2026-01-27 11:44:12] 2026-01-27 10:41:32,056 | INFO     | extracted standard memory fields from prmon json
[2026-01-27 11:44:12] 2026-01-27 10:41:32,056 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-27 11:44:12] 2026-01-27 10:41:32,057 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-27 11:44:12] 2026-01-27 10:41:32,057 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-27 11:44:12] 2026-01-27 10:41:32,060 | INFO     | fitting pss+swap vs Time
[2026-01-27 11:44:12] 2026-01-27 10:41:32,060 | INFO     | sum of square deviations: 1748737904.5
[2026-01-27 11:44:12] 2026-01-27 10:41:32,061 | INFO     | sum of deviations: 13674457016.5
[2026-01-27 11:44:12] 2026-01-27 10:41:32,061 | INFO     | mean x: 1769505022.5
[2026-01-27 11:44:12] 2026-01-27 10:41:32,061 | INFO     | mean y: 2329060.106741573
[2026-01-27 11:44:12] 2026-01-27 10:41:32,062 | INFO     | intersect: -13834518822.238178
[2026-01-27 11:44:12] 2026-01-27 10:41:32,062 | INFO     | chi2: 1.3315330968347217
[2026-01-27 11:44:12] 2026-01-27 10:41:32,062 | INFO     | sum of square deviations: 1605470102.0
[2026-01-27 11:44:12] 2026-01-27 10:41:32,063 | INFO     | sum of deviations: 13333807671.0
[2026-01-27 11:44:12] 2026-01-27 10:41:32,063 | INFO     | mean x: 1769504870.0
[2026-01-27 11:44:12] 2026-01-27 10:41:32,063 | INFO     | mean y: 2328697.4046242773
[2026-01-27 11:44:12] 2026-01-27 10:41:32,063 | INFO     | intersect: -14693826391.429197
[2026-01-27 11:44:12] 2026-01-27 10:41:32,064 | INFO     | chi2: 1.3325684331130887
[2026-01-27 11:44:12] 2026-01-27 10:41:32,064 | INFO     | current chi2=1.3325684331130887 (change=-0.07775520419494027 %)
[2026-01-27 11:44:12] 2026-01-27 10:41:32,064 | INFO     | right removable region: 172
[2026-01-27 11:44:12] 2026-01-27 10:41:32,064 | INFO     | sum of square deviations: 1605470102.0
[2026-01-27 11:44:12] 2026-01-27 10:41:32,065 | INFO     | sum of deviations: -8598599772.0
[2026-01-27 11:44:12] 2026-01-27 10:41:32,065 | INFO     | mean x: 1769505175.0
[2026-01-27 11:44:12] 2026-01-27 10:41:32,065 | INFO     | mean y: 2352418.641618497
[2026-01-27 11:44:12] 2026-01-27 10:41:32,065 | INFO     | intersect: 9479493584.55529
[2026-01-27 11:44:12] 2026-01-27 10:41:32,066 | INFO     | chi2: 0.015639878913841745
[2026-01-27 11:44:12] 2026-01-27 10:41:32,066 | INFO     | current chi2=0.015639878913841745 (change=98.82542319443502 %)
[2026-01-27 11:44:12] 2026-01-27 10:41:32,066 | INFO     | sum of square deviations: 1470248962.0
[2026-01-27 11:44:12] 2026-01-27 10:41:32,067 | INFO     | sum of deviations: -7886490469.0
[2026-01-27 11:44:12] 2026-01-27 10:41:32,067 | INFO     | mean x: 1769505327.5
[2026-01-27 11:44:12] 2026-01-27 10:41:32,067 | INFO     | mean y: 2351610.3214285714
[2026-01-27 11:44:12] 2026-01-27 10:41:32,067 | INFO     | intersect: 9494068496.956764
[2026-01-27 11:44:12] 2026-01-27 10:41:32,067 | INFO     | chi2: 0.015523611177152074
[2026-01-27 11:44:12] 2026-01-27 10:41:32,068 | INFO     | current chi2=0.015523611177152074 (change=0.7434056064639383 %)
[2026-01-27 11:44:12] 2026-01-27 10:41:32,068 | INFO     | left removable region: 20
[2026-01-27 11:44:12] 2026-01-27 10:41:32,068 | INFO     | sum of square deviations: 1088905998.0
[2026-01-27 11:44:12] 2026-01-27 10:41:32,069 | INFO     | sum of deviations: -4568464612.499999
[2026-01-27 11:44:12] 2026-01-27 10:41:32,069 | INFO     | mean x: 1769505449.5
[2026-01-27 11:44:12] 2026-01-27 10:41:32,069 | INFO     | mean y: 2347944.7302631577
[2026-01-27 11:44:12] 2026-01-27 10:41:32,069 | INFO     | intersect: 7426242240.945401
[2026-01-27 11:44:12] 2026-01-27 10:41:32,069 | INFO     | chi2: 0.01215484963643168
[2026-01-27 11:44:12] 2026-01-27 10:41:32,069 | INFO     | current memory leak: -4.20 B/s (using 152 data points, chi2=0.01)
[2026-01-27 11:44:12] 2026-01-27 10:41:32,070 | INFO     | could have reported an average CPU frequency of 2692 MHz (10 samples)
[2026-01-27 11:44:12] 2026-01-27 10:41:32,070 | INFO     | ..............................
[2026-01-27 11:44:12] 2026-01-27 10:41:32,070 | INFO     | . Timing measurements:
[2026-01-27 11:44:12] 2026-01-27 10:41:32,070 | INFO     | . get job = 0 s
[2026-01-27 11:44:12] 2026-01-27 10:41:32,070 | INFO     | . initial setup = 8 s
[2026-01-27 11:44:12] 2026-01-27 10:41:32,070 | INFO     | . payload setup = 8 s
[2026-01-27 11:44:12] 2026-01-27 10:41:32,070 | INFO     | . stage-in = 0 s
[2026-01-27 11:44:12] 2026-01-27 10:41:32,070 | INFO     | . payload execution = 10863 s
[2026-01-27 11:44:12] 2026-01-27 10:41:32,070 | INFO     | . stage-out = 1 s
[2026-01-27 11:44:12] 2026-01-27 10:41:32,070 | INFO     | . log creation = 0 s
[2026-01-27 11:44:12] 2026-01-27 10:41:32,071 | INFO     | ..............................
[2026-01-27 11:44:12] 2026-01-27 10:41:32,529 | INFO     | 
[2026-01-27 11:44:12] 2026-01-27 10:41:32,530 | INFO     | job summary report
[2026-01-27 11:44:12] 2026-01-27 10:41:32,530 | INFO     | --------------------------------------------------
[2026-01-27 11:44:12] 2026-01-27 10:41:32,530 | INFO     | PanDA job id: 6983304303
[2026-01-27 11:44:12] 2026-01-27 10:41:32,530 | INFO     | task id: 48318042
[2026-01-27 11:44:12] 2026-01-27 10:41:32,530 | INFO     | errors: (none)
[2026-01-27 11:44:12] 2026-01-27 10:41:32,530 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-27 11:44:12] 2026-01-27 10:41:32,530 | INFO     | pilot state: finished 
[2026-01-27 11:44:12] 2026-01-27 10:41:32,531 | INFO     | transexitcode: 0
[2026-01-27 11:44:12] 2026-01-27 10:41:32,531 | INFO     | exeerrorcode: 0
[2026-01-27 11:44:12] 2026-01-27 10:41:32,531 | INFO     | exeerrordiag: 
[2026-01-27 11:44:12] 2026-01-27 10:41:32,531 | INFO     | exitcode: 0
[2026-01-27 11:44:12] 2026-01-27 10:41:32,531 | INFO     | exitmsg: OK
[2026-01-27 11:44:12] 2026-01-27 10:41:32,531 | INFO     | cpuconsumptiontime: 41653 s
[2026-01-27 11:44:12] 2026-01-27 10:41:32,531 | INFO     | nevents: 400
[2026-01-27 11:44:12] 2026-01-27 10:41:32,531 | INFO     | neventsw: 0
[2026-01-27 11:44:12] 2026-01-27 10:41:32,531 | INFO     | pid: 1880369
[2026-01-27 11:44:12] 2026-01-27 10:41:32,531 | INFO     | pgrp: 1880369
[2026-01-27 11:44:12] 2026-01-27 10:41:32,531 | INFO     | corecount: 4
[2026-01-27 11:44:12] 2026-01-27 10:41:32,532 | INFO     | event service: False
[2026-01-27 11:44:12] 2026-01-27 10:41:32,532 | INFO     | sizes: {0: 2283825, 1: 2284286, 11: 2284286, 10876: 2313729, 10879: 2322749, 10881: 2322805, 10884: 2323127}
[2026-01-27 11:44:12] 2026-01-27 10:41:32,532 | INFO     | --------------------------------------------------
[2026-01-27 11:44:12] 2026-01-27 10:41:32,532 | INFO     | 
[2026-01-27 11:44:12] 2026-01-27 10:41:32,532 | INFO     | executing command: ls -lF /scratch/boinc/var/slot92/slots/0
[2026-01-27 11:44:12] 2026-01-27 10:41:32,570 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-27 11:44:12] 2026-01-27 10:41:32,570 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-27 11:44:12] 2026-01-27 10:41:32,570 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-27 11:44:12] 2026-01-27 10:41:32,570 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-27 11:44:12] 2026-01-27 10:41:32,570 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-27 11:44:12] 2026-01-27 10:41:32,571 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-27 11:44:12] 2026-01-27 10:41:32,571 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-27 11:44:12] 2026-01-27 10:41:32,571 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-27 11:44:12] 2026-01-27 10:41:32,571 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-27 11:44:12] 2026-01-27 10:41:32,571 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-27 11:44:12] 2026-01-27 10:41:32,571 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-27 11:44:12] 2026-01-27 10:41:32,571 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-27 11:44:12] 2026-01-27 10:41:32,571 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-27 11:44:12] 2026-01-27 10:41:32,571 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-27 11:44:12] 2026-01-27 10:41:32,571 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-27 11:44:12] 2026-01-27 10:41:32,571 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-27 11:44:12] 2026-01-27 10:41:32,572 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-27 11:44:12] 2026-01-27 10:41:32,572 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-27 11:44:12] 2026-01-27 10:41:32,572 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-27 11:44:12] 2026-01-27 10:41:32,572 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-27 11:44:12] 2026-01-27 10:41:32,572 | INFO     | job 6983304303 has completed (purged errors)
[2026-01-27 11:44:12] 2026-01-27 10:41:32,572 | INFO     | overall cleanup function is called
[2026-01-27 11:44:12] 2026-01-27 10:41:33,581 | INFO     | --- collectZombieJob: --- 10, [1880369]
[2026-01-27 11:44:12] 2026-01-27 10:41:33,582 | INFO     | zombie collector waiting for pid 1880369
[2026-01-27 11:44:12] 2026-01-27 10:41:33,582 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 11:44:12] 2026-01-27 10:41:33,582 | INFO     | collected zombie processes
[2026-01-27 11:44:12] 2026-01-27 10:41:33,582 | INFO     | will attempt to kill all subprocesses of pid=1880369
[2026-01-27 11:44:12] 2026-01-27 10:41:34,400 | INFO     | process IDs to be killed: [1880369] (in reverse order)
[2026-01-27 11:44:12] 2026-01-27 10:41:34,674 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 11:44:12] 2026-01-27 10:41:34,674 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 11:44:12] 2026-01-27 10:41:34,710 | INFO     | did not find any defunct processes belonging to 1880369
[2026-01-27 11:44:12] 2026-01-27 10:41:34,743 | INFO     | did not find any defunct processes belonging to 1880369
[2026-01-27 11:44:12] 2026-01-27 10:41:34,744 | INFO     | ready for new job
[2026-01-27 11:44:12] 2026-01-27 10:41:34,744 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 11:44:12] 2026-01-27 10:41:34,747 | INFO     | **************************************
[2026-01-27 11:44:12] 2026-01-27 10:41:34,747 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 11:44:12] 2026-01-27 10:41:34,747 | INFO     | **************************************
[2026-01-27 11:44:12] 2026-01-27 10:41:34,747 | INFO     | 
[2026-01-27 11:44:12] 2026-01-27 10:41:34,756 | INFO     | architecture information:
[2026-01-27 11:44:12] 2026-01-27 10:41:34,756 | INFO     | executing command: cat /etc/os-release
[2026-01-27 11:44:12] 2026-01-27 10:41:34,782 | INFO     | cat /etc/os-release:
[2026-01-27 11:44:12] NAME="CentOS Linux"
[2026-01-27 11:44:12] VERSION="7 (Core)"
[2026-01-27 11:44:12] ID="centos"
[2026-01-27 11:44:12] ID_LIKE="rhel fedora"
[2026-01-27 11:44:12] VERSION_ID="7"
[2026-01-27 11:44:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 11:44:12] ANSI_COLOR="0;31"
[2026-01-27 11:44:12] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 11:44:12] HOME_URL="https://www.centos.org/"
[2026-01-27 11:44:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 11:44:12] 
[2026-01-27 11:44:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 11:44:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 11:44:12] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 11:44:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 11:44:12] 
[2026-01-27 11:44:12] 2026-01-27 10:41:34,783 | INFO     | **************************************
[2026-01-27 11:44:12] 2026-01-27 10:41:35,286 | INFO     | executing command: df -mP /scratch/boinc/var/slot92/slots/0
[2026-01-27 11:44:12] 2026-01-27 10:41:35,312 | INFO     | sufficient remaining disk space (3273735012352 B)
[2026-01-27 11:44:12] 2026-01-27 10:41:35,312 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 11:44:12] 2026-01-27 10:41:35,312 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 11:44:12] 2026-01-27 10:41:35,312 | INFO     | update_server=False
[2026-01-27 11:44:12] 2026-01-27 10:41:35,312 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 11:44:12] 2026-01-27 10:41:35,313 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 11:44:12] 2026-01-27 10:41:35,313 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 11:44:12] 2026-01-27 10:41:35,367 | INFO     | all payload control threads have been joined
[2026-01-27 11:44:12] 2026-01-27 10:41:35,485 | INFO     | all job control threads have been joined
[2026-01-27 11:44:12] 2026-01-27 10:41:35,486 | INFO     | all data control threads have been joined
[2026-01-27 11:44:12] 2026-01-27 10:41:35,761 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 11:44:12] 2026-01-27 10:41:35,762 | INFO     | aborting loop
[2026-01-27 11:44:12] 2026-01-27 10:41:36,313 | INFO     | [job] retrieve thread has finished
[2026-01-27 11:44:12] 2026-01-27 10:41:36,326 | INFO     | [payload] validate_post thread has finished
[2026-01-27 11:44:12] 2026-01-27 10:41:36,372 | INFO     | [payload] control thread has finished
[2026-01-27 11:44:12] 2026-01-27 10:41:36,489 | INFO     | [job] control thread has finished
[2026-01-27 11:44:12] 2026-01-27 10:41:36,491 | INFO     | [data] control thread has finished
[2026-01-27 11:44:12] 2026-01-27 10:41:36,705 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 11:44:12] 2026-01-27 10:41:36,767 | INFO     | [job] job monitor thread has finished
[2026-01-27 11:44:12] 2026-01-27 10:41:37,098 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 11:44:12] 2026-01-27 10:41:37,105 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 11:44:12] 2026-01-27 10:41:37,164 | INFO     | [job] validate thread has finished
[2026-01-27 11:44:12] 2026-01-27 10:41:37,169 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 11:44:12] 2026-01-27 10:41:37,319 | INFO     | [data] copytool_out thread has finished
[2026-01-27 11:44:12] 2026-01-27 10:41:37,340 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 11:44:12] 2026-01-27 10:41:37,481 | INFO     | [payload] failed_post thread has finished
[2026-01-27 11:44:12] 2026-01-27 10:41:37,561 | INFO     | [data] copytool_in thread has finished
[2026-01-27 11:44:12] 2026-01-27 10:41:38,175 | INFO     | [job] queue monitor thread has finished
[2026-01-27 11:44:12] 2026-01-27 10:41:39,319 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 11:44:12] 2026-01-27 10:42:06,091 | INFO     | PID=1874680 has CPU usage=7.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-27 11:44:12] 2026-01-27 10:42:06,091 | INFO     | .. there are 10 such processes running
[2026-01-27 11:44:12] 2026-01-27 10:42:06,092 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 11:44:12] 2026-01-27 10:42:06,092 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 11:44:12] 2026-01-27 10:42:06,093 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 11:44:12] 2026-01-27 10:42:14,296 | INFO     | [monitor] cgroup control has ended
[2026-01-27 11:44:12] 2026-01-27 10:42:15,816 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22503107598144)>', '<ExcThread(monitor, started 22502799550208)>']
[2026-01-27 11:44:12] 2026-01-27 10:42:16,142 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 11:44:12] 2026-01-27 10:42:16,143 | INFO     | [monitor] control thread has ended
[2026-01-27 11:44:12] 2026-01-27 10:42:20,841 | INFO     | all workflow threads have been joined
[2026-01-27 11:44:12] 2026-01-27 10:42:20,842 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 11:44:12] 2026-01-27 10:42:20,842 | INFO     | traces error code: 0
[2026-01-27 11:44:12] 2026-01-27 10:42:20,842 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 11:44:12] 2026-01-27 10:42:21,064 [wrapper] ==== pilot stdout END ====
[2026-01-27 11:44:12] 2026-01-27 10:42:21,068 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 11:44:12] 2026-01-27 10:42:21,071 [wrapper] pilotpid: 1874680
[2026-01-27 11:44:12] 2026-01-27 10:42:21,075 [wrapper] Pilot exit status: 0
[2026-01-27 11:44:12] 2026-01-27 10:42:21,088 [wrapper] pandaids: 6983304303
[2026-01-27 11:44:12] 2026-01-27 10:42:21,275 [wrapper] cleanup supervisor_pilot 2098846 1874681
[2026-01-27 11:44:12] 2026-01-27 10:42:21,280 [wrapper] Test setup, not cleaning
[2026-01-27 11:44:12] 2026-01-27 10:42:21,284 [wrapper] apfmon messages muted
[2026-01-27 11:44:12] 2026-01-27 10:42:21,288 [wrapper] ==== wrapper stdout END ====
[2026-01-27 11:44:12] 2026-01-27 10:42:21,291 [wrapper] ==== wrapper stderr END ====
[2026-01-27 11:44:12]  *** Error codes and diagnostics ***
[2026-01-27 11:44:12]     "exeErrorCode": 0,
[2026-01-27 11:44:12]     "exeErrorDiag": "",
[2026-01-27 11:44:12]     "pilotErrorCode": 0,
[2026-01-27 11:44:12]     "pilotErrorDiag": "",
[2026-01-27 11:44:12]  *** Listing of results directory ***
[2026-01-27 11:44:12] total 682732
[2026-01-27 11:44:12] -rw-r--r-- 1 boinc boinc    584422 Jan 25 17:28 pilot3.tar.gz
[2026-01-27 11:44:12] -rwx------ 1 boinc boinc     36322 Jan 25 17:31 runpilot2-wrapper.sh
[2026-01-27 11:44:12] -rw-r--r-- 1 boinc boinc      5111 Jan 25 17:35 queuedata.json
[2026-01-27 11:44:12] -rw-r--r-- 1 boinc boinc       100 Jan 27 07:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 11:44:12] -rwxr-xr-x 1 boinc boinc      7986 Jan 27 07:04 run_atlas
[2026-01-27 11:44:12] -rw-r--r-- 1 boinc boinc       105 Jan 27 07:04 job.xml
[2026-01-27 11:44:12] -rw-r--r-- 2 boinc boinc 505417448 Jan 27 08:39 EVNT.48318040._000013.pool.root.1
[2026-01-27 11:44:12] -rw-r--r-- 1 boinc boinc      6689 Jan 27 08:39 init_data.xml
[2026-01-27 11:44:12] -rw-r--r-- 2 boinc boinc     15845 Jan 27 08:39 start_atlas.sh
[2026-01-27 11:44:12] drwxrwx--x 2 boinc boinc      4096 Jan 27 08:39 shared
[2026-01-27 11:44:12] -rw-r--r-- 2 boinc boinc    597770 Jan 27 08:39 input.tar.gz
[2026-01-27 11:44:12] -rw-r--r-- 1 boinc boinc         0 Jan 27 08:39 boinc_lockfile
[2026-01-27 11:44:12] -rw-r--r-- 1 boinc boinc      2531 Jan 27 08:39 pandaJob.out
[2026-01-27 11:44:12] -rw------- 1 boinc boinc   1003573 Jan 27 08:39 agis_schedconf.cvmfs.json
[2026-01-27 11:44:12] -rw------- 1 boinc boinc       443 Jan 27 08:39 workernode_map.json
[2026-01-27 11:44:12] drwx------ 5 boinc boinc      4096 Jan 27 08:39 pilot3
[2026-01-27 11:44:12] -rw------- 1 boinc boinc 185983069 Jan 27 11:40 HITS.48318042._000642.pool.root.1
[2026-01-27 11:44:12] -rw-r--r-- 1 boinc boinc       529 Jan 27 11:40 boinc_task_state.xml
[2026-01-27 11:44:12] -rw------- 1 boinc boinc      1029 Jan 27 11:41 memory_monitor_summary.json
[2026-01-27 11:44:12] -rw------- 1 boinc boinc   1516246 Jan 27 11:41 agis_ddmendpoints.agis.ALL.json
[2026-01-27 11:44:12] -rw------- 1 boinc boinc    376382 Jan 27 11:41 log.48318042._000642.job.log.tgz.1
[2026-01-27 11:44:12] -rw------- 1 boinc boinc      6353 Jan 27 11:41 heartbeat.json
[2026-01-27 11:44:12] -rw------- 1 boinc boinc        95 Jan 27 11:42 pilot_heartbeat.json
[2026-01-27 11:44:12] -rw------- 1 boinc boinc      4831 Jan 27 11:42 pilotlog.txt
[2026-01-27 11:44:12] -rw------- 1 boinc boinc   1514596 Jan 27 11:42 log.48318042._000642.job.log.1
[2026-01-27 11:44:12] -rw------- 1 boinc boinc       357 Jan 27 11:42 output.list
[2026-01-27 11:44:12] -rw-r--r-- 1 boinc boinc       620 Jan 27 11:42 runtime_log
[2026-01-27 11:44:12] -rw------- 1 boinc boinc   1904640 Jan 27 11:42 result.tar.gz
[2026-01-27 11:44:12] -rw------- 1 boinc boinc       665 Jan 27 11:42 zfTKDmvCI48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm607KDmbHPUbn.diag
[2026-01-27 11:44:12] -rw-r--r-- 1 boinc boinc      9205 Jan 27 11:42 runtime_log.err
[2026-01-27 11:44:12] -rw-r--r-- 1 boinc boinc        26 Jan 27 11:43 wrapper_checkpoint.txt
[2026-01-27 11:44:12] -rw-r--r-- 1 boinc boinc      8192 Jan 27 11:44 boinc_mmap_file
[2026-01-27 11:44:12] -rw-r--r-- 1 boinc boinc     21133 Jan 27 11:44 stderr.txt
[2026-01-27 11:44:12] HITS file was successfully produced:
[2026-01-27 11:44:12] -rw------- 1 boinc boinc 185983069 Jan 27 11:40 shared/HITS.pool.root.1
[2026-01-27 11:44:12]  *** Contents of shared directory: ***
[2026-01-27 11:44:12] total 677668
[2026-01-27 11:44:12] -rw-r--r-- 2 boinc boinc 505417448 Jan 27 08:39 ATLAS.root_0
[2026-01-27 11:44:12] -rw-r--r-- 2 boinc boinc     15845 Jan 27 08:39 start_atlas.sh
[2026-01-27 11:44:12] -rw-r--r-- 2 boinc boinc    597770 Jan 27 08:39 input.tar.gz
[2026-01-27 11:44:12] -rw------- 1 boinc boinc 185983069 Jan 27 11:40 HITS.pool.root.1
[2026-01-27 11:44:12] -rw------- 1 boinc boinc   1904640 Jan 27 11:42 result.tar.gz
11:44:13 (1870426): run_atlas exited; CPU time 42459.395986
11:44:13 (1870426): called boinc_finish(0)

</stderr_txt>
]]>

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