Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:44:08 (12940): wrapper (7.7.26015): starting
12:44:08 (12940): wrapper: running run_atlas (--nthreads 8)
[2026-01-27 12:44:08] Arguments: --nthreads 8
[2026-01-27 12:44:08] Threads: 8
[2026-01-27 12:44:08] Checking for CVMFS
[2026-01-27 12:44:09] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-27 12:44:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-27 12:44:10] Running cvmfs_config stat atlas.cern.ch
[2026-01-27 12:44:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-27 12:44:12] 2.11.2.0 24551 61290 133336 155583 3 55 24511781 25165825 899 130560 0 21150663 99.796 16507161 2877 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-27 12:44:12] CVMFS is ok
[2026-01-27 12:44:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-27 12:44:12] Checking for apptainer binary...
[2026-01-27 12:44:12] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-27 12:44:12] Running /usr/bin/apptainer --version
[2026-01-27 12:44:12] apptainer version 1.3.2-1.el7
[2026-01-27 12:44:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-27 12:44:18] cg-vwn415.simple-grid.lan
[2026-01-27 12:44:18] apptainer works
[2026-01-27 12:44:18] Set ATHENA_PROC_NUMBER=8
[2026-01-27 12:44:18] Set ATHENA_CORE_NUMBER=8
[2026-01-27 12:44:18] Starting ATLAS job with PandaID=6983773603
[2026-01-27 12:44:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 17:10:18]  *** The last 200 lines of the pilot log: ***
[2026-01-27 17:10:18] 2026-01-27 16:09:18,745 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-6983773603/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 17:10:18] 2026-01-27 16:09:18,746 | INFO     | extracted standard info from prmon json
[2026-01-27 17:10:18] 2026-01-27 16:09:18,746 | INFO     | extracted standard memory fields from prmon json
[2026-01-27 17:10:18] 2026-01-27 16:09:18,746 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-27 17:10:18] 2026-01-27 16:09:18,746 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-27 17:10:18] 2026-01-27 16:09:18,746 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-27 17:10:18] 2026-01-27 16:09:18,752 | INFO     | fitting pss+swap vs Time
[2026-01-27 17:10:18] 2026-01-27 16:09:18,752 | INFO     | sum of square deviations: 4844974562.5
[2026-01-27 17:10:18] 2026-01-27 16:09:18,755 | INFO     | sum of deviations: 91116458108.00008
[2026-01-27 17:10:18] 2026-01-27 16:09:18,755 | INFO     | mean x: 1769522525.5
[2026-01-27 17:10:18] 2026-01-27 16:09:18,755 | INFO     | mean y: 2446213.704
[2026-01-27 17:10:18] 2026-01-27 16:09:18,755 | INFO     | intersect: -33275876094.491455
[2026-01-27 17:10:18] 2026-01-27 16:09:18,755 | INFO     | chi2: 7.989751467163005
[2026-01-27 17:10:18] 2026-01-27 16:09:18,756 | INFO     | sum of square deviations: 4560048290.0
[2026-01-27 17:10:18] 2026-01-27 16:09:18,758 | INFO     | sum of deviations: 105564764022.00005
[2026-01-27 17:10:18] 2026-01-27 16:09:18,758 | INFO     | mean x: 1769522373.0
[2026-01-27 17:10:18] 2026-01-27 16:09:18,758 | INFO     | mean y: 2453802.7387755103
[2026-01-27 17:10:18] 2026-01-27 16:09:18,759 | INFO     | intersect: -40961851804.9535
[2026-01-27 17:10:18] 2026-01-27 16:09:18,759 | INFO     | chi2: 7.290978103172203
[2026-01-27 17:10:18] 2026-01-27 16:09:18,759 | INFO     | current chi2=7.290978103172203 (change=8.745871093270964 %)
[2026-01-27 17:10:18] 2026-01-27 16:09:18,759 | INFO     | right removable region: 244
[2026-01-27 17:10:18] 2026-01-27 16:09:18,764 | INFO     | sum of square deviations: 4560048290.0
[2026-01-27 17:10:18] 2026-01-27 16:09:18,766 | INFO     | sum of deviations: 6468773365.000023
[2026-01-27 17:10:18] 2026-01-27 16:09:18,766 | INFO     | mean x: 1769522678.0
[2026-01-27 17:10:18] 2026-01-27 16:09:18,766 | INFO     | mean y: 2491483.742857143
[2026-01-27 17:10:18] 2026-01-27 16:09:18,767 | INFO     | intersect: -2507710259.802695
[2026-01-27 17:10:18] 2026-01-27 16:09:18,767 | INFO     | chi2: 3.276799418727939
[2026-01-27 17:10:18] 2026-01-27 16:09:18,767 | INFO     | current chi2=3.276799418727939 (change=58.98746748011847 %)
[2026-01-27 17:10:18] 2026-01-27 16:09:18,768 | INFO     | sum of square deviations: 4286517580.0
[2026-01-27 17:10:18] 2026-01-27 16:09:18,770 | INFO     | sum of deviations: -51573953192.5
[2026-01-27 17:10:18] 2026-01-27 16:09:18,770 | INFO     | mean x: 1769522830.5
[2026-01-27 17:10:18] 2026-01-27 16:09:18,770 | INFO     | mean y: 2523750.254166667
[2026-01-27 17:10:18] 2026-01-27 16:09:18,770 | INFO     | intersect: 21292833641.68522
[2026-01-27 17:10:18] 2026-01-27 16:09:18,771 | INFO     | chi2: 1.0477267065510514
[2026-01-27 17:10:18] 2026-01-27 16:09:18,771 | INFO     | current chi2=1.0477267065510514 (change=68.02591270729103 %)
[2026-01-27 17:10:18] 2026-01-27 16:09:18,771 | INFO     | sum of square deviations: 4024149870.0
[2026-01-27 17:10:18] 2026-01-27 16:09:18,773 | INFO     | sum of deviations: -56187773744.99999
[2026-01-27 17:10:18] 2026-01-27 16:09:18,773 | INFO     | mean x: 1769522983.0
[2026-01-27 17:10:18] 2026-01-27 16:09:18,774 | INFO     | mean y: 2526374.229787234
[2026-01-27 17:10:18] 2026-01-27 16:09:18,774 | INFO     | intersect: 24709746586.528057
[2026-01-27 17:10:18] 2026-01-27 16:09:18,774 | INFO     | chi2: 0.9771785084061839
[2026-01-27 17:10:18] 2026-01-27 16:09:18,774 | INFO     | current chi2=0.9771785084061839 (change=6.733454220814972 %)
[2026-01-27 17:10:18] 2026-01-27 16:09:18,774 | INFO     | left removable region: 30
[2026-01-27 17:10:18] 2026-01-27 16:09:18,775 | INFO     | sum of square deviations: 3038856977.5
[2026-01-27 17:10:18] 2026-01-27 16:09:18,777 | INFO     | sum of deviations: -17151396748.500004
[2026-01-27 17:10:18] 2026-01-27 16:09:18,777 | INFO     | mean x: 1769523257.5
[2026-01-27 17:10:18] 2026-01-27 16:09:18,777 | INFO     | mean y: 2521225.2570093456
[2026-01-27 17:10:18] 2026-01-27 16:09:18,777 | INFO     | intersect: 9989761713.96495
[2026-01-27 17:10:18] 2026-01-27 16:09:18,777 | INFO     | chi2: 0.12711427566779968
[2026-01-27 17:10:18] 2026-01-27 16:09:18,778 | INFO     | current memory leak: -5.64 B/s (using 214 data points, chi2=0.13)
[2026-01-27 17:10:18] 2026-01-27 16:09:18,778 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2026-01-27 17:10:18] 2026-01-27 16:09:18,779 | INFO     | ..............................
[2026-01-27 17:10:18] 2026-01-27 16:09:18,779 | INFO     | . Timing measurements:
[2026-01-27 17:10:18] 2026-01-27 16:09:18,779 | INFO     | . get job = 0 s
[2026-01-27 17:10:18] 2026-01-27 16:09:18,779 | INFO     | . initial setup = 126 s
[2026-01-27 17:10:18] 2026-01-27 16:09:18,779 | INFO     | . payload setup = 144 s
[2026-01-27 17:10:18] 2026-01-27 16:09:18,779 | INFO     | . stage-in = 0 s
[2026-01-27 17:10:18] 2026-01-27 16:09:18,779 | INFO     | . payload execution = 15349 s
[2026-01-27 17:10:18] 2026-01-27 16:09:18,779 | INFO     | . stage-out = 4 s
[2026-01-27 17:10:18] 2026-01-27 16:09:18,779 | INFO     | . log creation = 1 s
[2026-01-27 17:10:18] 2026-01-27 16:09:18,779 | INFO     | ..............................
[2026-01-27 17:10:18] 2026-01-27 16:09:18,789 | INFO     | time since job start (15517s) is within the limit (349056.0s)
[2026-01-27 17:10:18] 2026-01-27 16:09:18,919 | INFO     | 
[2026-01-27 17:10:18] 2026-01-27 16:09:18,920 | INFO     | job summary report
[2026-01-27 17:10:18] 2026-01-27 16:09:18,920 | INFO     | --------------------------------------------------
[2026-01-27 17:10:18] 2026-01-27 16:09:18,920 | INFO     | PanDA job id: 6983773603
[2026-01-27 17:10:18] 2026-01-27 16:09:18,920 | INFO     | task id: 48318034
[2026-01-27 17:10:18] 2026-01-27 16:09:18,920 | INFO     | errors: (none)
[2026-01-27 17:10:18] 2026-01-27 16:09:18,920 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-27 17:10:18] 2026-01-27 16:09:18,920 | INFO     | pilot state: finished 
[2026-01-27 17:10:18] 2026-01-27 16:09:18,921 | INFO     | transexitcode: 0
[2026-01-27 17:10:18] 2026-01-27 16:09:18,921 | INFO     | exeerrorcode: 0
[2026-01-27 17:10:18] 2026-01-27 16:09:18,921 | INFO     | exeerrordiag: 
[2026-01-27 17:10:18] 2026-01-27 16:09:18,921 | INFO     | exitcode: 0
[2026-01-27 17:10:18] 2026-01-27 16:09:18,921 | INFO     | exitmsg: OK
[2026-01-27 17:10:18] 2026-01-27 16:09:18,921 | INFO     | cpuconsumptiontime: 57708 s
[2026-01-27 17:10:18] 2026-01-27 16:09:18,921 | INFO     | nevents: 400
[2026-01-27 17:10:18] 2026-01-27 16:09:18,921 | INFO     | neventsw: 0
[2026-01-27 17:10:18] 2026-01-27 16:09:18,921 | INFO     | pid: 21633
[2026-01-27 17:10:18] 2026-01-27 16:09:18,922 | INFO     | pgrp: 21633
[2026-01-27 17:10:18] 2026-01-27 16:09:18,922 | INFO     | corecount: 8
[2026-01-27 17:10:18] 2026-01-27 16:09:18,922 | INFO     | event service: False
[2026-01-27 17:10:18] 2026-01-27 16:09:18,922 | INFO     | sizes: {0: 2283771, 1: 2284204, 12: 2284232, 15497: 2315370, 15498: 2315369, 15502: 2324423, 15505: 2324801}
[2026-01-27 17:10:18] 2026-01-27 16:09:18,922 | INFO     | --------------------------------------------------
[2026-01-27 17:10:18] 2026-01-27 16:09:18,922 | INFO     | 
[2026-01-27 17:10:18] 2026-01-27 16:09:18,922 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2026-01-27 17:10:18] 2026-01-27 16:09:19,425 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-27 17:10:18] 2026-01-27 16:09:19,426 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-27 17:10:18] 2026-01-27 16:09:19,426 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-27 17:10:18] 2026-01-27 16:09:19,426 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-27 17:10:18] 2026-01-27 16:09:19,426 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-27 17:10:18] 2026-01-27 16:09:19,426 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-27 17:10:18] 2026-01-27 16:09:19,426 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-27 17:10:18] 2026-01-27 16:09:19,426 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-27 17:10:18] 2026-01-27 16:09:19,427 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-27 17:10:18] 2026-01-27 16:09:19,427 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-27 17:10:18] 2026-01-27 16:09:19,427 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-27 17:10:18] 2026-01-27 16:09:19,427 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-27 17:10:18] 2026-01-27 16:09:19,427 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-27 17:10:18] 2026-01-27 16:09:19,427 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-27 17:10:18] 2026-01-27 16:09:19,427 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-27 17:10:18] 2026-01-27 16:09:19,427 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-27 17:10:18] 2026-01-27 16:09:19,427 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-27 17:10:18] 2026-01-27 16:09:19,427 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-27 17:10:18] 2026-01-27 16:09:19,428 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-27 17:10:18] 2026-01-27 16:09:19,428 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-27 17:10:18] 2026-01-27 16:09:19,428 | INFO     | job 6983773603 has completed (purged errors)
[2026-01-27 17:10:18] 2026-01-27 16:09:19,428 | INFO     | overall cleanup function is called
[2026-01-27 17:10:18] 2026-01-27 16:09:19,889 | INFO     | PID=17099 has CPU usage=8.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-27 17:10:18] 2026-01-27 16:09:19,890 | INFO     | .. there are 2 such processes running
[2026-01-27 17:10:18] 2026-01-27 16:09:20,436 | INFO     | --- collectZombieJob: --- 10, [21633]
[2026-01-27 17:10:18] 2026-01-27 16:09:20,437 | INFO     | zombie collector waiting for pid 21633
[2026-01-27 17:10:18] 2026-01-27 16:09:20,437 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 17:10:18] 2026-01-27 16:09:20,437 | INFO     | collected zombie processes
[2026-01-27 17:10:18] 2026-01-27 16:09:20,437 | INFO     | will attempt to kill all subprocesses of pid=21633
[2026-01-27 17:10:18] 2026-01-27 16:09:20,517 | INFO     | process IDs to be killed: [21633] (in reverse order)
[2026-01-27 17:10:18] 2026-01-27 16:09:21,532 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 17:10:18] 2026-01-27 16:09:21,532 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 17:10:18] 2026-01-27 16:09:21,542 | INFO     | did not find any defunct processes belonging to 21633
[2026-01-27 17:10:18] 2026-01-27 16:09:21,544 | INFO     | did not find any defunct processes belonging to 21633
[2026-01-27 17:10:18] 2026-01-27 16:09:21,544 | INFO     | ready for new job
[2026-01-27 17:10:18] 2026-01-27 16:09:21,544 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 17:10:18] 2026-01-27 16:09:21,546 | INFO     | **************************************
[2026-01-27 17:10:18] 2026-01-27 16:09:21,547 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 17:10:18] 2026-01-27 16:09:21,547 | INFO     | **************************************
[2026-01-27 17:10:18] 2026-01-27 16:09:21,547 | INFO     | 
[2026-01-27 17:10:18] 2026-01-27 16:09:21,547 | INFO     | pilot is running in a VM
[2026-01-27 17:10:18] 2026-01-27 16:09:21,548 | INFO     | architecture information:
[2026-01-27 17:10:18] 2026-01-27 16:09:21,558 | INFO     | executing command: cat /etc/os-release
[2026-01-27 17:10:18] 2026-01-27 16:09:21,850 | INFO     | cat /etc/os-release:
[2026-01-27 17:10:18] NAME="CentOS Linux"
[2026-01-27 17:10:18] VERSION="7 (Core)"
[2026-01-27 17:10:18] ID="centos"
[2026-01-27 17:10:18] ID_LIKE="rhel fedora"
[2026-01-27 17:10:18] VERSION_ID="7"
[2026-01-27 17:10:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 17:10:18] ANSI_COLOR="0;31"
[2026-01-27 17:10:18] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 17:10:18] HOME_URL="https://www.centos.org/"
[2026-01-27 17:10:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 17:10:18] 
[2026-01-27 17:10:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 17:10:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 17:10:18] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 17:10:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 17:10:18] 
[2026-01-27 17:10:18] 2026-01-27 16:09:21,851 | INFO     | **************************************
[2026-01-27 17:10:18] 2026-01-27 16:09:22,355 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2026-01-27 17:10:18] 2026-01-27 16:09:22,637 | INFO     | sufficient remaining disk space (496590913536 B)
[2026-01-27 17:10:18] 2026-01-27 16:09:22,637 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 17:10:18] 2026-01-27 16:09:22,638 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 17:10:18] 2026-01-27 16:09:22,638 | INFO     | update_server=False
[2026-01-27 17:10:18] 2026-01-27 16:09:22,638 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 17:10:18] 2026-01-27 16:09:22,844 | INFO     | all job control threads have been joined
[2026-01-27 17:10:18] 2026-01-27 16:09:22,947 | INFO     | all data control threads have been joined
[2026-01-27 17:10:18] 2026-01-27 16:09:23,619 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 17:10:18] 2026-01-27 16:09:23,620 | INFO     | aborting loop
[2026-01-27 17:10:18] 2026-01-27 16:09:23,647 | INFO     | [job] retrieve thread has finished
[2026-01-27 17:10:18] 2026-01-27 16:09:23,678 | INFO     | all payload control threads have been joined
[2026-01-27 17:10:18] 2026-01-27 16:09:23,679 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 17:10:18] 2026-01-27 16:09:23,851 | INFO     | [job] control thread has finished
[2026-01-27 17:10:18] 2026-01-27 16:09:23,917 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 17:10:18] 2026-01-27 16:09:23,928 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 17:10:18] 2026-01-27 16:09:23,954 | INFO     | [data] control thread has finished
[2026-01-27 17:10:18] 2026-01-27 16:09:24,242 | INFO     | [job] validate thread has finished
[2026-01-27 17:10:18] 2026-01-27 16:09:24,300 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 17:10:18] 2026-01-27 16:09:24,360 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 17:10:18] 2026-01-27 16:09:24,480 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 17:10:18] 2026-01-27 16:09:24,626 | INFO     | [job] job monitor thread has finished
[2026-01-27 17:10:18] 2026-01-27 16:09:24,685 | INFO     | [payload] control thread has finished
[2026-01-27 17:10:18] 2026-01-27 16:09:24,915 | INFO     | [data] copytool_in thread has finished
[2026-01-27 17:10:18] 2026-01-27 16:09:24,924 | INFO     | [job] queue monitor thread has finished
[2026-01-27 17:10:18] 2026-01-27 16:09:25,099 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 17:10:18] 2026-01-27 16:09:25,169 | INFO     | [payload] validate_post thread has finished
[2026-01-27 17:10:18] 2026-01-27 16:09:25,191 | INFO     | [payload] failed_post thread has finished
[2026-01-27 17:10:18] 2026-01-27 16:09:25,687 | INFO     | [data] copytool_out thread has finished
[2026-01-27 17:10:18] 2026-01-27 16:09:28,370 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 17:10:18] 2026-01-27 16:09:52,017 | INFO     | PID=17099 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-27 17:10:18] 2026-01-27 16:09:52,017 | INFO     | .. there are 2 such processes running
[2026-01-27 17:10:18] 2026-01-27 16:09:52,018 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 17:10:18] 2026-01-27 16:09:52,018 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 17:10:18] 2026-01-27 16:09:52,018 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 17:10:18] 2026-01-27 16:10:07,177 | INFO     | [monitor] cgroup control has ended
[2026-01-27 17:10:18] 2026-01-27 16:10:07,369 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139898154006336)>', '<ExcThread(monitor, started 139897713174272)>']
[2026-01-27 17:10:18] 2026-01-27 16:10:08,113 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 17:10:18] 2026-01-27 16:10:08,114 | INFO     | [monitor] control thread has ended
[2026-01-27 17:10:18] 2026-01-27 16:10:12,394 | INFO     | all workflow threads have been joined
[2026-01-27 17:10:18] 2026-01-27 16:10:12,395 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 17:10:18] 2026-01-27 16:10:12,395 | INFO     | traces error code: 0
[2026-01-27 17:10:18] 2026-01-27 16:10:12,395 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 17:10:18] 2026-01-27 16:10:12,824 [wrapper] ==== pilot stdout END ====
[2026-01-27 17:10:18] 2026-01-27 16:10:12,923 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 17:10:18] 2026-01-27 16:10:13,012 [wrapper] pilotpid: 17099
[2026-01-27 17:10:18] 2026-01-27 16:10:13,126 [wrapper] Pilot exit status: 0
[2026-01-27 17:10:18] 2026-01-27 16:10:13,643 [wrapper] pandaids: 6983773603
[2026-01-27 17:10:18] 2026-01-27 16:10:14,765 [wrapper] cleanup supervisor_pilot 27587 17100
[2026-01-27 17:10:18] 2026-01-27 16:10:14,882 [wrapper] Test setup, not cleaning
[2026-01-27 17:10:18] 2026-01-27 16:10:14,969 [wrapper] apfmon messages muted
[2026-01-27 17:10:18] 2026-01-27 16:10:15,080 [wrapper] ==== wrapper stdout END ====
[2026-01-27 17:10:18] 2026-01-27 16:10:15,129 [wrapper] ==== wrapper stderr END ====
[2026-01-27 17:10:18]  *** Error codes and diagnostics ***
[2026-01-27 17:10:18]     "exeErrorCode": 0,
[2026-01-27 17:10:18]     "exeErrorDiag": "",
[2026-01-27 17:10:18]     "pilotErrorCode": 0,
[2026-01-27 17:10:18]     "pilotErrorDiag": "",
[2026-01-27 17:10:18]  *** Listing of results directory ***
[2026-01-27 17:10:18] total 670400
[2026-01-27 17:10:18] -rw-r--r--. 1 boinc boinc    584422 Jan 26 06:14 pilot3.tar.gz
[2026-01-27 17:10:18] -rwx------. 1 boinc boinc     36322 Jan 26 06:17 runpilot2-wrapper.sh
[2026-01-27 17:10:18] -rw-r--r--. 1 boinc boinc      5111 Jan 26 06:22 queuedata.json
[2026-01-27 17:10:18] -rw-r--r--. 1 boinc boinc       100 Jan 27 12:44 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 17:10:18] -rwxr-xr-x. 1 boinc boinc      7986 Jan 27 12:44 run_atlas
[2026-01-27 17:10:18] -rw-r--r--. 1 boinc boinc       105 Jan 27 12:44 job.xml
[2026-01-27 17:10:18] -rw-r--r--. 1 boinc boinc      6391 Jan 27 12:44 init_data.xml
[2026-01-27 17:10:18] -rw-r--r--. 2 boinc boinc 491651873 Jan 27 12:44 EVNT.48318032._000068.pool.root.1
[2026-01-27 17:10:18] -rw-r--r--. 2 boinc boinc     15845 Jan 27 12:44 start_atlas.sh
[2026-01-27 17:10:18] drwxrwx--x. 2 boinc boinc        68 Jan 27 12:44 shared
[2026-01-27 17:10:18] -rw-r--r--. 2 boinc boinc    597772 Jan 27 12:44 input.tar.gz
[2026-01-27 17:10:18] -rw-r--r--. 1 boinc boinc         0 Jan 27 12:44 boinc_lockfile
[2026-01-27 17:10:18] -rw-r--r--. 1 boinc boinc      2535 Jan 27 12:44 pandaJob.out
[2026-01-27 17:10:18] -rw-------. 1 boinc boinc       415 Jan 27 12:50 workernode_map.json
[2026-01-27 17:10:18] -rw-------. 1 boinc boinc   1002853 Jan 27 12:50 agis_schedconf.cvmfs.json
[2026-01-27 17:10:18] drwx------. 5 boinc boinc      4096 Jan 27 12:50 pilot3
[2026-01-27 17:10:18] -rw-------. 1 boinc boinc 185557122 Jan 27 17:07 HITS.48318034._002731.pool.root.1
[2026-01-27 17:10:18] -rw-r--r--. 1 boinc boinc       531 Jan 27 17:07 boinc_task_state.xml
[2026-01-27 17:10:18] -rw-------. 1 boinc boinc        95 Jan 27 17:08 pilot_heartbeat.json
[2026-01-27 17:10:18] -rw-------. 1 boinc boinc      1024 Jan 27 17:09 memory_monitor_summary.json
[2026-01-27 17:10:18] -rw-------. 1 boinc boinc   1516246 Jan 27 17:09 agis_ddmendpoints.agis.ALL.json
[2026-01-27 17:10:18] -rw-------. 1 boinc boinc    501202 Jan 27 17:09 log.48318034._002731.job.log.tgz.1
[2026-01-27 17:10:18] -rw-------. 1 boinc boinc      6316 Jan 27 17:09 heartbeat.json
[2026-01-27 17:10:18] -rw-r--r--. 1 boinc boinc      8192 Jan 27 17:10 boinc_mmap_file
[2026-01-27 17:10:18] -rw-r--r--. 1 boinc boinc        28 Jan 27 17:10 wrapper_checkpoint.txt
[2026-01-27 17:10:18] -rw-------. 1 boinc boinc      4880 Jan 27 17:10 pilotlog.txt
[2026-01-27 17:10:18] -rw-------. 1 boinc boinc   2177706 Jan 27 17:10 log.48318034._002731.job.log.1
[2026-01-27 17:10:18] -rw-------. 1 boinc boinc       357 Jan 27 17:10 output.list
[2026-01-27 17:10:18] -rw-r--r--. 1 boinc boinc       620 Jan 27 17:10 runtime_log
[2026-01-27 17:10:18] -rw-------. 1 boinc boinc   2693120 Jan 27 17:10 result.tar.gz
[2026-01-27 17:10:18] -rw-r--r--. 1 boinc boinc      8816 Jan 27 17:10 runtime_log.err
[2026-01-27 17:10:18] -rw-------. 1 boinc boinc       655 Jan 27 17:10 1MbNDmFAU48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmig2KDmJARA0m.diag
[2026-01-27 17:10:18] -rw-r--r--. 1 boinc boinc     20810 Jan 27 17:10 stderr.txt
[2026-01-27 17:10:18] HITS file was successfully produced:
[2026-01-27 17:10:18] -rw-------. 1 boinc boinc 185557122 Jan 27 17:07 shared/HITS.pool.root.1
[2026-01-27 17:10:18]  *** Contents of shared directory: ***
[2026-01-27 17:10:18] total 664576
[2026-01-27 17:10:18] -rw-r--r--. 2 boinc boinc 491651873 Jan 27 12:44 ATLAS.root_0
[2026-01-27 17:10:18] -rw-r--r--. 2 boinc boinc     15845 Jan 27 12:44 start_atlas.sh
[2026-01-27 17:10:18] -rw-r--r--. 2 boinc boinc    597772 Jan 27 12:44 input.tar.gz
[2026-01-27 17:10:18] -rw-------. 1 boinc boinc 185557122 Jan 27 17:07 HITS.pool.root.1
[2026-01-27 17:10:18] -rw-------. 1 boinc boinc   2693120 Jan 27 17:10 result.tar.gz
17:10:19 (12940): run_atlas exited; CPU time 57873.166762
17:10:19 (12940): called boinc_finish(0)

</stderr_txt>
]]>

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