Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:49:04 (2060421): wrapper (7.7.26015): starting
22:49:04 (2060421): wrapper: running run_atlas (--nthreads 8)
[2026-01-26 22:49:04] Arguments: --nthreads 8
[2026-01-26 22:49:04] Threads: 8
[2026-01-26 22:49:04] Checking for CVMFS
[2026-01-26 22:49:05] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 22:49:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 22:49:05] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 22:49:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 22:49:06] 2.13.3.0 8759 46780 161452 155571 0 933 40218751 40960001 40583 16776704 0 321821636 99.691 248644190 44759 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-26 22:49:06] CVMFS is ok
[2026-01-26 22:49:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 22:49:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 22:49:06] Further information can be found at the LHC@home message board.
[2026-01-26 22:49:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 22:49:06] Checking for apptainer binary...
[2026-01-26 22:49:06] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 22:49:06] Running /usr/bin/apptainer --version
[2026-01-26 22:49:06] apptainer version 1.4.5-2.el9
[2026-01-26 22:49:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 22:49:07] c-208-39.aglt2.org
[2026-01-26 22:49:07] apptainer works
[2026-01-26 22:49:07] Set ATHENA_PROC_NUMBER=8
[2026-01-26 22:49:07] Set ATHENA_CORE_NUMBER=8
[2026-01-26 22:49:07] Starting ATLAS job with PandaID=6983773732
[2026-01-26 22:49:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 00:20:29]  *** The last 200 lines of the pilot log: ***
[2026-01-27 00:20:29]  protocol_id=None
[2026-01-27 00:20:29]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-27 00:20:29]  replicas=None
[2026-01-27 00:20:29]  scope=mc23_13p6TeV
[2026-01-27 00:20:29]  status=None
[2026-01-27 00:20:29]  status_code=0
[2026-01-27 00:20:29]  storage_token=
[2026-01-27 00:20:29]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6983773732/log.48318034._002860.job.log.tgz.1
[2026-01-27 00:20:29]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d3/a7/log.48318034._002860.job.log.tgz.1
[2026-01-27 00:20:29]  workdir=None
[2026-01-27 00:20:29] ]
[2026-01-27 00:20:29] 2026-01-27 05:19:39,578 | INFO     | transferring file log.48318034._002860.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6983773732/log.48318034._002860.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-27 00:20:29] 2026-01-27 05:19:39,578 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6983773732/log.48318034._002860.job.log.tgz.1 /tmp/boinchome/slots/0/log.48318034._002860.job
[2026-01-27 00:20:29] 2026-01-27 05:19:39,706 | INFO     | adding to output.list: log.48318034._002860.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d3/a7/log.48318034._002860.job.log.tg
[2026-01-27 00:20:29] 2026-01-27 05:19:39,706 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-27 00:20:29] 2026-01-27 05:19:39,706 | INFO     | summary of transferred files:
[2026-01-27 00:20:29] 2026-01-27 05:19:39,706 | INFO     |  -- lfn=log.48318034._002860.job.log.tgz.1, status_code=0, status=transferred
[2026-01-27 00:20:29] 2026-01-27 05:19:39,707 | INFO     | stage-out finished correctly
[2026-01-27 00:20:29] 2026-01-27 05:19:40,506 | INFO     | monitor loop #359: job 0:6983773732 is in state 'finished'
[2026-01-27 00:20:29] 2026-01-27 05:19:40,506 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-27 00:20:29] 2026-01-27 05:19:40,955 | INFO     | PID=2075959 has CPU usage=9.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-27 00:20:29] 2026-01-27 05:19:40,955 | INFO     | .. there are 46 such processes running
[2026-01-27 00:20:29] 2026-01-27 05:19:41,957 | INFO     | time since job start (5392s) is within the limit (349056.0s)
[2026-01-27 00:20:29] 2026-01-27 05:19:43,014 | INFO     | monitor loop #360: job 0:6983773732 is in state 'finished'
[2026-01-27 00:20:29] 2026-01-27 05:19:43,014 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-27 00:20:29] 2026-01-27 05:19:43,062 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-27 00:20:29] 2026-01-27 05:19:43,967 | INFO     | time since job start (5394s) is within the limit (349056.0s)
[2026-01-27 00:20:29] 2026-01-27 05:19:45,526 | INFO     | monitor loop #361: job 0:6983773732 is in state 'finished'
[2026-01-27 00:20:29] 2026-01-27 05:19:45,528 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-27 00:20:29] 2026-01-27 05:19:45,974 | INFO     | time since job start (5396s) is within the limit (349056.0s)
[2026-01-27 00:20:29] 2026-01-27 05:19:46,109 | INFO     | job 6983773732 has state=finished
[2026-01-27 00:20:29] 2026-01-27 05:19:46,109 | INFO     | preparing for final server update for job 6983773732 in state='finished'
[2026-01-27 00:20:29] 2026-01-27 05:19:46,110 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-6983773732/jobReport.json
[2026-01-27 00:20:29] 2026-01-27 05:19:46,111 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-01-27 00:20:29] 2026-01-27 05:19:46,111 | INFO     | this job has now completed (state=finished)
[2026-01-27 00:20:29] 2026-01-27 05:19:46,111 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-27 00:20:29] 2026-01-27 05:19:46,111 | INFO     | log transfer has been attempted: DONE
[2026-01-27 00:20:29] 2026-01-27 05:19:46,112 | INFO     | job 6983773732 has finished - writing final server update
[2026-01-27 00:20:29] 2026-01-27 05:19:46,112 | INFO     | total number of processed events: 400 (read)
[2026-01-27 00:20:29] 2026-01-27 05:19:46,173 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6983773732/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 00:20:29] 2026-01-27 05:19:46,192 | INFO     | extracted standard info from prmon json
[2026-01-27 00:20:29] 2026-01-27 05:19:46,192 | INFO     | extracted standard memory fields from prmon json
[2026-01-27 00:20:29] 2026-01-27 05:19:46,192 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-27 00:20:29] 2026-01-27 05:19:46,192 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-27 00:20:29] 2026-01-27 05:19:46,192 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-27 00:20:29] 2026-01-27 05:19:46,193 | INFO     | fitting pss+swap vs Time
[2026-01-27 00:20:29] 2026-01-27 05:19:46,193 | INFO     | sum of square deviations: 164753208.69135806
[2026-01-27 00:20:29] 2026-01-27 05:19:46,194 | INFO     | sum of deviations: 2152030904.358024
[2026-01-27 00:20:29] 2026-01-27 05:19:46,194 | INFO     | mean x: 1769488580.0617285
[2026-01-27 00:20:29] 2026-01-27 05:19:46,194 | INFO     | mean y: 2484203.7283950616
[2026-01-27 00:20:29] 2026-01-27 05:19:46,194 | INFO     | intersect: -23110838683.56771
[2026-01-27 00:20:29] 2026-01-27 05:19:46,194 | INFO     | chi2: 0.049787893652382655
[2026-01-27 00:20:29] 2026-01-27 05:19:46,194 | INFO     | current memory leak: 13.06 B/s (using 81 data points, chi2=0.05)
[2026-01-27 00:20:29] 2026-01-27 05:19:46,194 | INFO     | could have reported an average CPU frequency of 3800 MHz (6 samples)
[2026-01-27 00:20:29] 2026-01-27 05:19:46,194 | INFO     | ..............................
[2026-01-27 00:20:29] 2026-01-27 05:19:46,194 | INFO     | . Timing measurements:
[2026-01-27 00:20:29] 2026-01-27 05:19:46,194 | INFO     | . get job = 0 s
[2026-01-27 00:20:29] 2026-01-27 05:19:46,194 | INFO     | . initial setup = 13 s
[2026-01-27 00:20:29] 2026-01-27 05:19:46,194 | INFO     | . payload setup = 20 s
[2026-01-27 00:20:29] 2026-01-27 05:19:46,194 | INFO     | . stage-in = 0 s
[2026-01-27 00:20:29] 2026-01-27 05:19:46,194 | INFO     | . payload execution = 5351 s
[2026-01-27 00:20:29] 2026-01-27 05:19:46,194 | INFO     | . stage-out = 2 s
[2026-01-27 00:20:29] 2026-01-27 05:19:46,194 | INFO     | . log creation = 1 s
[2026-01-27 00:20:29] 2026-01-27 05:19:46,194 | INFO     | ..............................
[2026-01-27 00:20:29] 2026-01-27 05:19:46,314 | INFO     | 
[2026-01-27 00:20:29] 2026-01-27 05:19:46,315 | INFO     | job summary report
[2026-01-27 00:20:29] 2026-01-27 05:19:46,315 | INFO     | --------------------------------------------------
[2026-01-27 00:20:29] 2026-01-27 05:19:46,315 | INFO     | PanDA job id: 6983773732
[2026-01-27 00:20:29] 2026-01-27 05:19:46,315 | INFO     | task id: 48318034
[2026-01-27 00:20:29] 2026-01-27 05:19:46,315 | INFO     | errors: (none)
[2026-01-27 00:20:29] 2026-01-27 05:19:46,315 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-27 00:20:29] 2026-01-27 05:19:46,315 | INFO     | pilot state: finished 
[2026-01-27 00:20:29] 2026-01-27 05:19:46,315 | INFO     | transexitcode: 0
[2026-01-27 00:20:29] 2026-01-27 05:19:46,315 | INFO     | exeerrorcode: 0
[2026-01-27 00:20:29] 2026-01-27 05:19:46,315 | INFO     | exeerrordiag: 
[2026-01-27 00:20:29] 2026-01-27 05:19:46,315 | INFO     | exitcode: 0
[2026-01-27 00:20:29] 2026-01-27 05:19:46,315 | INFO     | exitmsg: OK
[2026-01-27 00:20:29] 2026-01-27 05:19:46,315 | INFO     | cpuconsumptiontime: 22488 s
[2026-01-27 00:20:29] 2026-01-27 05:19:46,315 | INFO     | nevents: 400
[2026-01-27 00:20:29] 2026-01-27 05:19:46,315 | INFO     | neventsw: 0
[2026-01-27 00:20:29] 2026-01-27 05:19:46,315 | INFO     | pid: 2083282
[2026-01-27 00:20:29] 2026-01-27 05:19:46,315 | INFO     | pgrp: 2083282
[2026-01-27 00:20:29] 2026-01-27 05:19:46,315 | INFO     | corecount: 8
[2026-01-27 00:20:29] 2026-01-27 05:19:46,315 | INFO     | event service: False
[2026-01-27 00:20:29] 2026-01-27 05:19:46,315 | INFO     | sizes: {0: 2283766, 1: 2284227, 11: 2284227, 5376: 2310813, 5379: 2319811, 5383: 2319867, 5386: 2320189}
[2026-01-27 00:20:29] 2026-01-27 05:19:46,315 | INFO     | --------------------------------------------------
[2026-01-27 00:20:29] 2026-01-27 05:19:46,315 | INFO     | 
[2026-01-27 00:20:29] 2026-01-27 05:19:46,315 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-27 00:20:29] 2026-01-27 05:19:46,383 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-27 00:20:29] 2026-01-27 05:19:46,383 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-27 00:20:29] 2026-01-27 05:19:46,383 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-27 00:20:29] 2026-01-27 05:19:46,383 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-27 00:20:29] 2026-01-27 05:19:46,383 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-27 00:20:29] 2026-01-27 05:19:46,383 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-27 00:20:29] 2026-01-27 05:19:46,383 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-27 00:20:29] 2026-01-27 05:19:46,383 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-27 00:20:29] 2026-01-27 05:19:46,384 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-27 00:20:29] 2026-01-27 05:19:46,384 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-27 00:20:29] 2026-01-27 05:19:46,384 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-27 00:20:29] 2026-01-27 05:19:46,384 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-27 00:20:29] 2026-01-27 05:19:46,384 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-27 00:20:29] 2026-01-27 05:19:46,384 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-27 00:20:29] 2026-01-27 05:19:46,384 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-27 00:20:29] 2026-01-27 05:19:46,384 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-27 00:20:29] 2026-01-27 05:19:46,384 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-27 00:20:29] 2026-01-27 05:19:46,384 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-27 00:20:29] 2026-01-27 05:19:46,384 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-27 00:20:29] 2026-01-27 05:19:46,384 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-27 00:20:29] 2026-01-27 05:19:46,384 | INFO     | job 6983773732 has completed (purged errors)
[2026-01-27 00:20:29] 2026-01-27 05:19:46,384 | INFO     | overall cleanup function is called
[2026-01-27 00:20:29] 2026-01-27 05:19:47,399 | INFO     | --- collectZombieJob: --- 10, [2083282]
[2026-01-27 00:20:29] 2026-01-27 05:19:47,399 | INFO     | zombie collector waiting for pid 2083282
[2026-01-27 00:20:29] 2026-01-27 05:19:47,399 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 00:20:29] 2026-01-27 05:19:47,399 | INFO     | collected zombie processes
[2026-01-27 00:20:29] 2026-01-27 05:19:47,399 | INFO     | will attempt to kill all subprocesses of pid=2083282
[2026-01-27 00:20:29] 2026-01-27 05:19:48,524 | INFO     | process IDs to be killed: [2083282] (in reverse order)
[2026-01-27 00:20:29] 2026-01-27 05:19:48,845 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 00:20:29] 2026-01-27 05:19:48,845 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 00:20:29] 2026-01-27 05:19:48,961 | INFO     | did not find any defunct processes belonging to 2083282
[2026-01-27 00:20:29] 2026-01-27 05:19:49,094 | INFO     | did not find any defunct processes belonging to 2083282
[2026-01-27 00:20:29] 2026-01-27 05:19:49,094 | INFO     | ready for new job
[2026-01-27 00:20:29] 2026-01-27 05:19:49,094 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 00:20:29] 2026-01-27 05:19:49,096 | INFO     | **************************************
[2026-01-27 00:20:29] 2026-01-27 05:19:49,096 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 00:20:29] 2026-01-27 05:19:49,096 | INFO     | **************************************
[2026-01-27 00:20:29] 2026-01-27 05:19:49,096 | INFO     | 
[2026-01-27 00:20:29] 2026-01-27 05:19:49,106 | INFO     | architecture information:
[2026-01-27 00:20:29] 2026-01-27 05:19:49,124 | INFO     | executing command: cat /etc/os-release
[2026-01-27 00:20:29] 2026-01-27 05:19:49,216 | INFO     | cat /etc/os-release:
[2026-01-27 00:20:29] NAME="CentOS Linux"
[2026-01-27 00:20:29] VERSION="7 (Core)"
[2026-01-27 00:20:29] ID="centos"
[2026-01-27 00:20:29] ID_LIKE="rhel fedora"
[2026-01-27 00:20:29] VERSION_ID="7"
[2026-01-27 00:20:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 00:20:29] ANSI_COLOR="0;31"
[2026-01-27 00:20:29] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 00:20:29] HOME_URL="https://www.centos.org/"
[2026-01-27 00:20:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 00:20:29] 
[2026-01-27 00:20:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 00:20:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 00:20:29] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 00:20:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 00:20:29] 
[2026-01-27 00:20:29] 2026-01-27 05:19:49,219 | INFO     | **************************************
[2026-01-27 00:20:29] 2026-01-27 05:19:49,728 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-27 00:20:29] 2026-01-27 05:19:49,804 | INFO     | sufficient remaining disk space (154396524544 B)
[2026-01-27 00:20:29] 2026-01-27 05:19:49,804 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 00:20:29] 2026-01-27 05:19:49,804 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 00:20:29] 2026-01-27 05:19:49,804 | INFO     | update_server=False
[2026-01-27 00:20:29] 2026-01-27 05:19:49,804 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 00:20:29] 2026-01-27 05:19:49,804 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 00:20:29] 2026-01-27 05:19:49,804 | INFO     | aborting loop
[2026-01-27 00:20:29] 2026-01-27 05:19:49,810 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 00:20:29] 2026-01-27 05:19:49,890 | INFO     | all payload control threads have been joined
[2026-01-27 00:20:29] 2026-01-27 05:19:50,513 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 00:20:29] 2026-01-27 05:19:50,810 | INFO     | [job] retrieve thread has finished
[2026-01-27 00:20:29] 2026-01-27 05:19:50,811 | INFO     | [job] job monitor thread has finished
[2026-01-27 00:20:29] 2026-01-27 05:19:50,817 | INFO     | all data control threads have been joined
[2026-01-27 00:20:29] 2026-01-27 05:19:50,896 | INFO     | [payload] control thread has finished
[2026-01-27 00:20:29] 2026-01-27 05:19:50,984 | INFO     | [payload] failed_post thread has finished
[2026-01-27 00:20:29] 2026-01-27 05:19:51,064 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 00:20:29] 2026-01-27 05:19:51,121 | INFO     | all job control threads have been joined
[2026-01-27 00:20:29] 2026-01-27 05:19:51,172 | INFO     | [job] validate thread has finished
[2026-01-27 00:20:29] 2026-01-27 05:19:51,176 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 00:20:29] 2026-01-27 05:19:51,341 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 00:20:29] 2026-01-27 05:19:51,823 | INFO     | [data] control thread has finished
[2026-01-27 00:20:29] 2026-01-27 05:19:52,021 | INFO     | [payload] validate_post thread has finished
[2026-01-27 00:20:29] 2026-01-27 05:19:52,127 | INFO     | [job] control thread has finished
[2026-01-27 00:20:29] 2026-01-27 05:19:52,289 | INFO     | [data] copytool_in thread has finished
[2026-01-27 00:20:29] 2026-01-27 05:19:52,313 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 00:20:29] 2026-01-27 05:19:52,346 | INFO     | [job] queue monitor thread has finished
[2026-01-27 00:20:29] 2026-01-27 05:19:52,519 | INFO     | [data] copytool_out thread has finished
[2026-01-27 00:20:29] 2026-01-27 05:19:53,818 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 00:20:29] 2026-01-27 05:19:58,151 | INFO     | [monitor] cgroup control has ended
[2026-01-27 00:20:29] 2026-01-27 05:20:00,714 | INFO     | job.realtimelogging is not enabled
[2026-01-27 00:20:29] 2026-01-27 05:20:01,719 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 00:20:29] 2026-01-27 05:20:02,006 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140040105031488)>', '<ExcThread(monitor, started 140039740708608)>']
[2026-01-27 00:20:29] 2026-01-27 05:20:07,032 | INFO     | all workflow threads have been joined
[2026-01-27 00:20:29] 2026-01-27 05:20:07,032 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 00:20:29] 2026-01-27 05:20:07,032 | INFO     | traces error code: 0
[2026-01-27 00:20:29] 2026-01-27 05:20:07,033 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 00:20:29] 2026-01-27 05:20:22,525 | INFO     | PID=2075959 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-27 00:20:29] 2026-01-27 05:20:22,526 | INFO     | .. there are 46 such processes running
[2026-01-27 00:20:29] 2026-01-27 05:20:22,551 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 00:20:29] 2026-01-27 05:20:22,551 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 00:20:29] 2026-01-27 05:20:22,551 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 00:20:29] 2026-01-27 05:20:22,551 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 00:20:29] 2026-01-27 05:20:22,551 | INFO     | [monitor] control thread has ended
[2026-01-27 00:20:29] 2026-01-27 05:20:22,981 [wrapper] ==== pilot stdout END ====
[2026-01-27 00:20:29] 2026-01-27 05:20:23,021 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 00:20:29] 2026-01-27 05:20:23,079 [wrapper] pilotpid: 2075959
[2026-01-27 00:20:29] 2026-01-27 05:20:23,136 [wrapper] Pilot exit status: 0
[2026-01-27 00:20:29] 2026-01-27 05:20:23,309 [wrapper] pandaids: 6983773732
[2026-01-27 00:20:29] 2026-01-27 05:20:23,971 [wrapper] cleanup supervisor_pilot 2681202 2075960
[2026-01-27 00:20:29] 2026-01-27 05:20:24,018 [wrapper] Test setup, not cleaning
[2026-01-27 00:20:29] 2026-01-27 05:20:24,073 [wrapper] apfmon messages muted
[2026-01-27 00:20:29] 2026-01-27 05:20:24,102 [wrapper] ==== wrapper stdout END ====
[2026-01-27 00:20:29] 2026-01-27 05:20:24,126 [wrapper] ==== wrapper stderr END ====
[2026-01-27 00:20:29]  *** Error codes and diagnostics ***
[2026-01-27 00:20:29]     "exeErrorCode": 0,
[2026-01-27 00:20:29]     "exeErrorDiag": "",
[2026-01-27 00:20:29]     "pilotErrorCode": 0,
[2026-01-27 00:20:29]     "pilotErrorDiag": "",
[2026-01-27 00:20:29]  *** Listing of results directory ***
[2026-01-27 00:20:29] total 664460
[2026-01-27 00:20:29] -rw-r--r--. 1 boincer umatlas    584422 Jan 26 00:14 pilot3.tar.gz
[2026-01-27 00:20:29] -rwx------. 1 boincer umatlas     36322 Jan 26 00:15 runpilot2-wrapper.sh
[2026-01-27 00:20:29] -rw-r--r--. 1 boincer umatlas      5111 Jan 26 00:15 queuedata.json
[2026-01-27 00:20:29] -rw-r--r--. 1 boincer umatlas       100 Jan 26 22:49 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 00:20:29] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 26 22:49 run_atlas
[2026-01-27 00:20:29] -rw-r--r--. 1 boincer umatlas       105 Jan 26 22:49 job.xml
[2026-01-27 00:20:29] -rw-r--r--. 2 boincer umatlas 496596118 Jan 26 22:49 EVNT.48318032._000036.pool.root.1
[2026-01-27 00:20:29] -rw-r--r--. 2 boincer umatlas     15845 Jan 26 22:49 start_atlas.sh
[2026-01-27 00:20:29] drwxrwx--x. 2 boincer umatlas      4096 Jan 26 22:49 shared
[2026-01-27 00:20:29] -rw-r--r--. 2 boincer umatlas    597765 Jan 26 22:49 input.tar.gz
[2026-01-27 00:20:29] -rw-r--r--. 1 boincer umatlas         0 Jan 26 22:49 boinc_lockfile
[2026-01-27 00:20:29] -rw-r--r--. 1 boincer umatlas      2532 Jan 26 22:49 pandaJob.out
[2026-01-27 00:20:29] -rw-------. 1 boincer umatlas        57 Jan 26 22:49 setup.sh.local
[2026-01-27 00:20:29] -rw-------. 1 boincer umatlas   1006433 Jan 26 22:49 agis_schedconf.cvmfs.json
[2026-01-27 00:20:29] -rw-------. 1 boincer umatlas   1516246 Jan 26 22:49 agis_ddmendpoints.agis.ALL.json
[2026-01-27 00:20:29] -rw-------. 1 boincer umatlas       432 Jan 26 22:49 workernode_map.json
[2026-01-27 00:20:29] drwx------. 5 boincer umatlas      4096 Jan 26 22:49 pilot3
[2026-01-27 00:20:29] -rw-r--r--. 1 boincer umatlas      7185 Jan 27 00:10 init_data.xml
[2026-01-27 00:20:29] -rw-------. 1 boincer umatlas 177714246 Jan 27 00:18 HITS.48318034._002860.pool.root.1
[2026-01-27 00:20:29] -rw-r--r--. 1 boincer umatlas       530 Jan 27 00:18 boinc_task_state.xml
[2026-01-27 00:20:29] -rw-------. 1 boincer umatlas      1049 Jan 27 00:19 memory_monitor_summary.json
[2026-01-27 00:20:29] -rw-------. 1 boincer umatlas    332171 Jan 27 00:19 log.48318034._002860.job.log.tgz.1
[2026-01-27 00:20:29] -rw-------. 1 boincer umatlas      6364 Jan 27 00:19 heartbeat.json
[2026-01-27 00:20:29] -rw-------. 1 boincer umatlas        95 Jan 27 00:20 pilot_heartbeat.json
[2026-01-27 00:20:29] -rw-------. 1 boincer umatlas       823 Jan 27 00:20 pilotlog.txt
[2026-01-27 00:20:29] -rw-------. 1 boincer umatlas    742495 Jan 27 00:20 log.48318034._002860.job.log.1
[2026-01-27 00:20:29] -rw-------. 1 boincer umatlas       357 Jan 27 00:20 output.list
[2026-01-27 00:20:29] -rw-r--r--. 1 boincer umatlas       620 Jan 27 00:20 runtime_log
[2026-01-27 00:20:29] -rw-------. 1 boincer umatlas   1095680 Jan 27 00:20 result.tar.gz
[2026-01-27 00:20:29] -rw-r--r--. 1 boincer umatlas      9341 Jan 27 00:20 runtime_log.err
[2026-01-27 00:20:29] -rw-------. 1 boincer umatlas       657 Jan 27 00:20 OWmLDmU7T48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmoZ2KDmOB1tdm.diag
[2026-01-27 00:20:29] -rw-r--r--. 1 boincer umatlas      8192 Jan 27 00:20 boinc_mmap_file
[2026-01-27 00:20:29] -rw-r--r--. 1 boincer umatlas        27 Jan 27 00:20 wrapper_checkpoint.txt
[2026-01-27 00:20:29] -rw-r--r--. 1 boincer umatlas     21910 Jan 27 00:20 stderr.txt
[2026-01-27 00:20:29] HITS file was successfully produced:
[2026-01-27 00:20:29] -rw-------. 1 boincer umatlas 177714246 Jan 27 00:18 shared/HITS.pool.root.1
[2026-01-27 00:20:29]  *** Contents of shared directory: ***
[2026-01-27 00:20:29] total 660188
[2026-01-27 00:20:29] -rw-r--r--. 2 boincer umatlas 496596118 Jan 26 22:49 ATLAS.root_0
[2026-01-27 00:20:29] -rw-r--r--. 2 boincer umatlas     15845 Jan 26 22:49 start_atlas.sh
[2026-01-27 00:20:29] -rw-r--r--. 2 boincer umatlas    597765 Jan 26 22:49 input.tar.gz
[2026-01-27 00:20:29] -rw-------. 1 boincer umatlas 177714246 Jan 27 00:18 HITS.pool.root.1
[2026-01-27 00:20:29] -rw-------. 1 boincer umatlas   1095680 Jan 27 00:20 result.tar.gz
00:20:31 (2060421): run_atlas exited; CPU time 22658.211767
00:20:31 (2060421): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN