Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:40 (110060): wrapper (7.7.26015): starting
00:02:40 (110060): wrapper: running run_atlas (--nthreads 12)
[2026-01-27 00:02:40] Arguments: --nthreads 12
[2026-01-27 00:02:40] Threads: 12
[2026-01-27 00:02:40] Checking for CVMFS
[2026-01-27 00:02:41] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-27 00:02:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-27 00:02:41] Running cvmfs_config stat atlas.cern.ch
[2026-01-27 00:02:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-27 00:02:42] 2.13.3.0 7558 118884 360040 155573 0 89 21708208 32935937 18256 16776704 0 348966409 99.467 503991960 38931 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-27 00:02:42] CVMFS is ok
[2026-01-27 00:02:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-27 00:02:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-27 00:02:42] Further information can be found at the LHC@home message board.
[2026-01-27 00:02:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-27 00:02:42] Checking for apptainer binary...
[2026-01-27 00:02:42] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-27 00:02:42] Running /usr/bin/apptainer --version
[2026-01-27 00:02:42] apptainer version 1.4.5-2.el9
[2026-01-27 00:02:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-27 00:02:43] c6-6-39-2.aglt2.org
[2026-01-27 00:02:43] apptainer works
[2026-01-27 00:02:43] Set ATHENA_PROC_NUMBER=12
[2026-01-27 00:02:43] Set ATHENA_CORE_NUMBER=12
[2026-01-27 00:02:43] Starting ATLAS job with PandaID=6984063212
[2026-01-27 00:02:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 06:05:00]  *** The last 200 lines of the pilot log: ***
[2026-01-27 06:05:00] 2026-01-27 11:04:02,043 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-27 06:05:00] 2026-01-27 11:04:02,043 | INFO     | log transfer has been attempted: DONE
[2026-01-27 06:05:00] 2026-01-27 11:04:02,043 | INFO     | job 6984063212 has finished - writing final server update
[2026-01-27 06:05:00] 2026-01-27 11:04:02,043 | INFO     | total number of processed events: 400 (read)
[2026-01-27 06:05:00] 2026-01-27 11:04:02,061 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6984063212/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 06:05:00] 2026-01-27 11:04:02,062 | INFO     | extracted standard info from prmon json
[2026-01-27 06:05:00] 2026-01-27 11:04:02,062 | INFO     | extracted standard memory fields from prmon json
[2026-01-27 06:05:00] 2026-01-27 11:04:02,062 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-27 06:05:00] 2026-01-27 11:04:02,062 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-27 06:05:00] 2026-01-27 11:04:02,062 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-27 06:05:00] 2026-01-27 11:04:02,076 | INFO     | fitting pss+swap vs Time
[2026-01-27 06:05:00] 2026-01-27 11:04:02,077 | INFO     | sum of square deviations: 13639461388.413511
[2026-01-27 06:05:00] 2026-01-27 11:04:02,084 | INFO     | sum of deviations: 108638844737.2153
[2026-01-27 06:05:00] 2026-01-27 11:04:02,084 | INFO     | mean x: 1769501065.2294617
[2026-01-27 06:05:00] 2026-01-27 11:04:02,084 | INFO     | mean y: 2631076.133144476
[2026-01-27 06:05:00] 2026-01-27 11:04:02,084 | INFO     | intersect: -14091514287.341562
[2026-01-27 06:05:00] 2026-01-27 11:04:02,084 | INFO     | chi2: 2.5628556642153084
[2026-01-27 06:05:00] 2026-01-27 11:04:02,085 | INFO     | sum of square deviations: 13068070728.14654
[2026-01-27 06:05:00] 2026-01-27 11:04:02,092 | INFO     | sum of deviations: 130155591199.18109
[2026-01-27 06:05:00] 2026-01-27 11:04:02,092 | INFO     | mean x: 1769500912.7327585
[2026-01-27 06:05:00] 2026-01-27 11:04:02,092 | INFO     | mean y: 2636744.5718390807
[2026-01-27 06:05:00] 2026-01-27 11:04:02,092 | INFO     | intersect: -17621268284.360306
[2026-01-27 06:05:00] 2026-01-27 11:04:02,093 | INFO     | chi2: 1.847474358283682
[2026-01-27 06:05:00] 2026-01-27 11:04:02,093 | INFO     | current chi2=1.847474358283682 (change=27.913444987182334 %)
[2026-01-27 06:05:00] 2026-01-27 11:04:02,094 | INFO     | sum of square deviations: 12512845311.341162
[2026-01-27 06:05:00] 2026-01-27 11:04:02,100 | INFO     | sum of deviations: 127127555496.66191
[2026-01-27 06:05:00] 2026-01-27 11:04:02,101 | INFO     | mean x: 1769500760.233236
[2026-01-27 06:05:00] 2026-01-27 11:04:02,101 | INFO     | mean y: 2635912.854227405
[2026-01-27 06:05:00] 2026-01-27 11:04:02,101 | INFO     | intersect: -17975074232.259453
[2026-01-27 06:05:00] 2026-01-27 11:04:02,101 | INFO     | chi2: 1.84755962595883
[2026-01-27 06:05:00] 2026-01-27 11:04:02,101 | INFO     | current chi2=1.84755962595883 (change=-0.004615364471276014 %)
[2026-01-27 06:05:00] 2026-01-27 11:04:02,101 | INFO     | right removable region: 342
[2026-01-27 06:05:00] 2026-01-27 11:04:02,102 | INFO     | sum of square deviations: 13068021318.14654
[2026-01-27 06:05:00] 2026-01-27 11:04:02,109 | INFO     | sum of deviations: 35735373266.66382
[2026-01-27 06:05:00] 2026-01-27 11:04:02,109 | INFO     | mean x: 1769501217.7327585
[2026-01-27 06:05:00] 2026-01-27 11:04:02,109 | INFO     | mean y: 2650446.3189655175
[2026-01-27 06:05:00] 2026-01-27 11:04:02,109 | INFO     | intersect: -4836168298.465945
[2026-01-27 06:05:00] 2026-01-27 11:04:02,110 | INFO     | chi2: 0.8083449795986044
[2026-01-27 06:05:00] 2026-01-27 11:04:02,110 | INFO     | current chi2=0.8083449795986044 (change=68.45920779365848 %)
[2026-01-27 06:05:00] 2026-01-27 11:04:02,110 | INFO     | sum of square deviations: 12512767597.871782
[2026-01-27 06:05:00] 2026-01-27 11:04:02,117 | INFO     | sum of deviations: 17261489343.186604
[2026-01-27 06:05:00] 2026-01-27 11:04:02,117 | INFO     | mean x: 1769501370.2361517
[2026-01-27 06:05:00] 2026-01-27 11:04:02,117 | INFO     | mean y: 2655516.565597668
[2026-01-27 06:05:00] 2026-01-27 11:04:02,117 | INFO     | intersect: -2438389504.543921
[2026-01-27 06:05:00] 2026-01-27 11:04:02,118 | INFO     | chi2: 0.7328008528362044
[2026-01-27 06:05:00] 2026-01-27 11:04:02,118 | INFO     | current chi2=0.7328008528362044 (change=9.345530518407193 %)
[2026-01-27 06:05:00] 2026-01-27 11:04:02,118 | INFO     | left removable region: 20
[2026-01-27 06:05:00] 2026-01-27 11:04:02,118 | INFO     | sum of square deviations: 10352519395.71432
[2026-01-27 06:05:00] 2026-01-27 11:04:02,125 | INFO     | sum of deviations: 30404361355.714275
[2026-01-27 06:05:00] 2026-01-27 11:04:02,125 | INFO     | mean x: 1769501339.7142856
[2026-01-27 06:05:00] 2026-01-27 11:04:02,125 | INFO     | mean y: 2663282.844720497
[2026-01-27 06:05:00] 2026-01-27 11:04:02,125 | INFO     | intersect: -5194193259.57004
[2026-01-27 06:05:00] 2026-01-27 11:04:02,126 | INFO     | chi2: 0.0008527817022259345
[2026-01-27 06:05:00] 2026-01-27 11:04:02,126 | INFO     | current memory leak: 2.94 B/s (using 322 data points, chi2=0.00)
[2026-01-27 06:05:00] 2026-01-27 11:04:02,127 | INFO     | could have reported an average CPU frequency of 2885 MHz (15 samples)
[2026-01-27 06:05:00] 2026-01-27 11:04:02,127 | INFO     | ..............................
[2026-01-27 06:05:00] 2026-01-27 11:04:02,127 | INFO     | . Timing measurements:
[2026-01-27 06:05:00] 2026-01-27 11:04:02,127 | INFO     | . get job = 0 s
[2026-01-27 06:05:00] 2026-01-27 11:04:02,127 | INFO     | . initial setup = 34 s
[2026-01-27 06:05:00] 2026-01-27 11:04:02,127 | INFO     | . payload setup = 42 s
[2026-01-27 06:05:00] 2026-01-27 11:04:02,127 | INFO     | . stage-in = 0 s
[2026-01-27 06:05:00] 2026-01-27 11:04:02,127 | INFO     | . payload execution = 21531 s
[2026-01-27 06:05:00] 2026-01-27 11:04:02,127 | INFO     | . stage-out = 3 s
[2026-01-27 06:05:00] 2026-01-27 11:04:02,127 | INFO     | . log creation = 0 s
[2026-01-27 06:05:00] 2026-01-27 11:04:02,127 | INFO     | ..............................
[2026-01-27 06:05:00] 2026-01-27 11:04:02,820 | INFO     | 
[2026-01-27 06:05:00] 2026-01-27 11:04:02,820 | INFO     | job summary report
[2026-01-27 06:05:00] 2026-01-27 11:04:02,820 | INFO     | --------------------------------------------------
[2026-01-27 06:05:00] 2026-01-27 11:04:02,820 | INFO     | PanDA job id: 6984063212
[2026-01-27 06:05:00] 2026-01-27 11:04:02,820 | INFO     | task id: 48317952
[2026-01-27 06:05:00] 2026-01-27 11:04:02,820 | INFO     | errors: (none)
[2026-01-27 06:05:00] 2026-01-27 11:04:02,821 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-27 06:05:00] 2026-01-27 11:04:02,821 | INFO     | pilot state: finished 
[2026-01-27 06:05:00] 2026-01-27 11:04:02,821 | INFO     | transexitcode: 0
[2026-01-27 06:05:00] 2026-01-27 11:04:02,821 | INFO     | exeerrorcode: 0
[2026-01-27 06:05:00] 2026-01-27 11:04:02,821 | INFO     | exeerrordiag: 
[2026-01-27 06:05:00] 2026-01-27 11:04:02,821 | INFO     | exitcode: 0
[2026-01-27 06:05:00] 2026-01-27 11:04:02,821 | INFO     | exitmsg: OK
[2026-01-27 06:05:00] 2026-01-27 11:04:02,821 | INFO     | cpuconsumptiontime: 41823 s
[2026-01-27 06:05:00] 2026-01-27 11:04:02,821 | INFO     | nevents: 400
[2026-01-27 06:05:00] 2026-01-27 11:04:02,821 | INFO     | neventsw: 0
[2026-01-27 06:05:00] 2026-01-27 11:04:02,821 | INFO     | pid: 121199
[2026-01-27 06:05:00] 2026-01-27 11:04:02,822 | INFO     | pgrp: 121199
[2026-01-27 06:05:00] 2026-01-27 11:04:02,822 | INFO     | corecount: 12
[2026-01-27 06:05:00] 2026-01-27 11:04:02,822 | INFO     | event service: False
[2026-01-27 06:05:00] 2026-01-27 11:04:02,822 | INFO     | sizes: {0: 2283800, 1: 2284261, 2: 2284289, 21578: 2318747, 21582: 2327745, 21584: 2328123}
[2026-01-27 06:05:00] 2026-01-27 11:04:02,822 | INFO     | --------------------------------------------------
[2026-01-27 06:05:00] 2026-01-27 11:04:02,822 | INFO     | 
[2026-01-27 06:05:00] 2026-01-27 11:04:02,822 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-27 06:05:00] 2026-01-27 11:04:02,886 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-27 06:05:00] 2026-01-27 11:04:02,887 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-27 06:05:00] 2026-01-27 11:04:02,887 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-27 06:05:00] 2026-01-27 11:04:02,887 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-27 06:05:00] 2026-01-27 11:04:02,887 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-27 06:05:00] 2026-01-27 11:04:02,887 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-27 06:05:00] 2026-01-27 11:04:02,887 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-27 06:05:00] 2026-01-27 11:04:02,887 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-27 06:05:00] 2026-01-27 11:04:02,887 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-27 06:05:00] 2026-01-27 11:04:02,887 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-27 06:05:00] 2026-01-27 11:04:02,887 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-27 06:05:00] 2026-01-27 11:04:02,887 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-27 06:05:00] 2026-01-27 11:04:02,888 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-27 06:05:00] 2026-01-27 11:04:02,888 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-27 06:05:00] 2026-01-27 11:04:02,888 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-27 06:05:00] 2026-01-27 11:04:02,888 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-27 06:05:00] 2026-01-27 11:04:02,888 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-27 06:05:00] 2026-01-27 11:04:02,888 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-27 06:05:00] 2026-01-27 11:04:02,888 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-27 06:05:00] 2026-01-27 11:04:02,888 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-27 06:05:00] 2026-01-27 11:04:02,888 | INFO     | job 6984063212 has completed (purged errors)
[2026-01-27 06:05:00] 2026-01-27 11:04:02,888 | INFO     | overall cleanup function is called
[2026-01-27 06:05:00] 2026-01-27 11:04:03,901 | INFO     | --- collectZombieJob: --- 10, [121199]
[2026-01-27 06:05:00] 2026-01-27 11:04:03,901 | INFO     | zombie collector waiting for pid 121199
[2026-01-27 06:05:00] 2026-01-27 11:04:03,901 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 06:05:00] 2026-01-27 11:04:03,901 | INFO     | collected zombie processes
[2026-01-27 06:05:00] 2026-01-27 11:04:03,901 | INFO     | will attempt to kill all subprocesses of pid=121199
[2026-01-27 06:05:00] 2026-01-27 11:04:04,926 | INFO     | process IDs to be killed: [121199] (in reverse order)
[2026-01-27 06:05:00] 2026-01-27 11:04:05,194 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 06:05:00] 2026-01-27 11:04:05,194 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 06:05:00] 2026-01-27 11:04:05,219 | INFO     | did not find any defunct processes belonging to 121199
[2026-01-27 06:05:00] 2026-01-27 11:04:05,243 | INFO     | did not find any defunct processes belonging to 121199
[2026-01-27 06:05:00] 2026-01-27 11:04:05,244 | INFO     | ready for new job
[2026-01-27 06:05:00] 2026-01-27 11:04:05,244 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 06:05:00] 2026-01-27 11:04:05,250 | INFO     | **************************************
[2026-01-27 06:05:00] 2026-01-27 11:04:05,251 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 06:05:00] 2026-01-27 11:04:05,251 | INFO     | **************************************
[2026-01-27 06:05:00] 2026-01-27 11:04:05,251 | INFO     | 
[2026-01-27 06:05:00] 2026-01-27 11:04:05,258 | INFO     | architecture information:
[2026-01-27 06:05:00] 2026-01-27 11:04:05,258 | INFO     | executing command: cat /etc/os-release
[2026-01-27 06:05:00] 2026-01-27 11:04:05,282 | INFO     | cat /etc/os-release:
[2026-01-27 06:05:00] NAME="CentOS Linux"
[2026-01-27 06:05:00] VERSION="7 (Core)"
[2026-01-27 06:05:00] ID="centos"
[2026-01-27 06:05:00] ID_LIKE="rhel fedora"
[2026-01-27 06:05:00] VERSION_ID="7"
[2026-01-27 06:05:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 06:05:00] ANSI_COLOR="0;31"
[2026-01-27 06:05:00] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 06:05:00] HOME_URL="https://www.centos.org/"
[2026-01-27 06:05:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 06:05:00] 
[2026-01-27 06:05:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 06:05:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 06:05:00] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 06:05:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 06:05:00] 
[2026-01-27 06:05:00] 2026-01-27 11:04:05,282 | INFO     | **************************************
[2026-01-27 06:05:00] 2026-01-27 11:04:05,788 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-27 06:05:00] 2026-01-27 11:04:05,841 | INFO     | sufficient remaining disk space (72684142592 B)
[2026-01-27 06:05:00] 2026-01-27 11:04:05,842 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 06:05:00] 2026-01-27 11:04:05,842 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 06:05:00] 2026-01-27 11:04:05,842 | INFO     | update_server=False
[2026-01-27 06:05:00] 2026-01-27 11:04:05,842 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 06:05:00] 2026-01-27 11:04:05,843 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 06:05:00] 2026-01-27 11:04:05,847 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 06:05:00] 2026-01-27 11:04:05,847 | INFO     | aborting loop
[2026-01-27 06:05:00] 2026-01-27 11:04:05,989 | INFO     | all data control threads have been joined
[2026-01-27 06:05:00] 2026-01-27 11:04:06,486 | INFO     | all job control threads have been joined
[2026-01-27 06:05:00] 2026-01-27 11:04:06,609 | INFO     | all payload control threads have been joined
[2026-01-27 06:05:00] 2026-01-27 11:04:06,847 | INFO     | [job] retrieve thread has finished
[2026-01-27 06:05:00] 2026-01-27 11:04:06,853 | INFO     | [job] job monitor thread has finished
[2026-01-27 06:05:00] 2026-01-27 11:04:06,865 | INFO     | [payload] validate_post thread has finished
[2026-01-27 06:05:00] 2026-01-27 11:04:06,995 | INFO     | [data] control thread has finished
[2026-01-27 06:05:00] 2026-01-27 11:04:07,344 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 06:05:00] 2026-01-27 11:04:07,368 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 06:05:00] 2026-01-27 11:04:07,391 | INFO     | [data] copytool_in thread has finished
[2026-01-27 06:05:00] 2026-01-27 11:04:07,492 | INFO     | [job] control thread has finished
[2026-01-27 06:05:00] 2026-01-27 11:04:07,615 | INFO     | [payload] control thread has finished
[2026-01-27 06:05:00] 2026-01-27 11:04:07,850 | INFO     | [data] copytool_out thread has finished
[2026-01-27 06:05:00] 2026-01-27 11:04:07,870 | INFO     | [job] validate thread has finished
[2026-01-27 06:05:00] 2026-01-27 11:04:07,876 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 06:05:00] 2026-01-27 11:04:07,928 | INFO     | [payload] failed_post thread has finished
[2026-01-27 06:05:00] 2026-01-27 11:04:08,089 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 06:05:00] 2026-01-27 11:04:08,104 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 06:05:00] 2026-01-27 11:04:08,170 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 06:05:00] 2026-01-27 11:04:08,374 | INFO     | [job] queue monitor thread has finished
[2026-01-27 06:05:00] 2026-01-27 11:04:12,113 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 06:05:00] 2026-01-27 11:04:35,002 | INFO     | PID=114569 has CPU usage=6.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-27 06:05:00] 2026-01-27 11:04:35,002 | INFO     | .. there are 18 such processes running
[2026-01-27 06:05:00] 2026-01-27 11:04:35,002 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 06:05:00] 2026-01-27 11:04:35,002 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 06:05:00] 2026-01-27 11:04:35,002 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 06:05:00] 2026-01-27 11:04:52,741 | INFO     | [monitor] cgroup control has ended
[2026-01-27 06:05:00] 2026-01-27 11:04:52,829 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140202017249088)>', '<ExcThread(monitor, started 140201515001600)>']
[2026-01-27 06:05:00] 2026-01-27 11:04:53,121 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 06:05:00] 2026-01-27 11:04:53,121 | INFO     | [monitor] control thread has ended
[2026-01-27 06:05:00] 2026-01-27 11:04:57,871 | INFO     | all workflow threads have been joined
[2026-01-27 06:05:00] 2026-01-27 11:04:57,871 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 06:05:00] 2026-01-27 11:04:57,871 | INFO     | traces error code: 0
[2026-01-27 06:05:00] 2026-01-27 11:04:57,871 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 06:05:00] 2026-01-27 11:05:00,283 [wrapper] ==== pilot stdout END ====
[2026-01-27 06:05:00] 2026-01-27 11:05:00,288 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 06:05:00] 2026-01-27 11:05:00,292 [wrapper] pilotpid: 114569
[2026-01-27 06:05:00] 2026-01-27 11:05:00,303 [wrapper] Pilot exit status: 0
[2026-01-27 06:05:00] 2026-01-27 11:05:00,347 [wrapper] pandaids: 6984063212
[2026-01-27 06:05:00] 2026-01-27 11:05:00,472 [wrapper] cleanup supervisor_pilot 1172964 114570
[2026-01-27 06:05:00] 2026-01-27 11:05:00,481 [wrapper] Test setup, not cleaning
[2026-01-27 06:05:00] 2026-01-27 11:05:00,497 [wrapper] apfmon messages muted
[2026-01-27 06:05:00] 2026-01-27 11:05:00,515 [wrapper] ==== wrapper stdout END ====
[2026-01-27 06:05:00] 2026-01-27 11:05:00,535 [wrapper] ==== wrapper stderr END ====
[2026-01-27 06:05:00]  *** Error codes and diagnostics ***
[2026-01-27 06:05:00]     "exeErrorCode": 0,
[2026-01-27 06:05:00]     "exeErrorDiag": "",
[2026-01-27 06:05:00]     "pilotErrorCode": 0,
[2026-01-27 06:05:00]     "pilotErrorDiag": "",
[2026-01-27 06:05:00]  *** Listing of results directory ***
[2026-01-27 06:05:00] total 676284
[2026-01-27 06:05:00] -rw-r--r--. 1 boincer umatlas    584422 Jan 26 02:37 pilot3.tar.gz
[2026-01-27 06:05:00] -rwx------. 1 boincer umatlas     36322 Jan 26 02:39 runpilot2-wrapper.sh
[2026-01-27 06:05:00] -rw-r--r--. 1 boincer umatlas      5111 Jan 26 02:40 queuedata.json
[2026-01-27 06:05:00] -rw-r--r--. 1 boincer umatlas       100 Jan 27 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 06:05:00] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 27 00:02 run_atlas
[2026-01-27 06:05:00] -rw-r--r--. 1 boincer umatlas       105 Jan 27 00:02 job.xml
[2026-01-27 06:05:00] -rw-r--r--. 2 boincer umatlas 500551900 Jan 27 00:02 EVNT.48317949._000013.pool.root.1
[2026-01-27 06:05:00] drwxrwx--x. 2 boincer umatlas      4096 Jan 27 00:02 shared
[2026-01-27 06:05:00] -rw-r--r--. 2 boincer umatlas    597754 Jan 27 00:02 input.tar.gz
[2026-01-27 06:05:00] -rw-r--r--. 2 boincer umatlas     15845 Jan 27 00:02 start_atlas.sh
[2026-01-27 06:05:00] -rw-r--r--. 1 boincer umatlas         0 Jan 27 00:02 boinc_lockfile
[2026-01-27 06:05:00] -rw-r--r--. 1 boincer umatlas      2517 Jan 27 00:02 pandaJob.out
[2026-01-27 06:05:00] -rw-------. 1 boincer umatlas        57 Jan 27 00:02 setup.sh.local
[2026-01-27 06:05:00] -rw-------. 1 boincer umatlas   1006441 Jan 27 00:03 agis_schedconf.cvmfs.json
[2026-01-27 06:05:00] -rw-------. 1 boincer umatlas       441 Jan 27 00:04 workernode_map.json
[2026-01-27 06:05:00] drwx------. 5 boincer umatlas      4096 Jan 27 00:04 pilot3
[2026-01-27 06:05:00] -rw-r--r--. 1 boincer umatlas      6843 Jan 27 06:02 init_data.xml
[2026-01-27 06:05:00] -rw-------. 1 boincer umatlas 180935231 Jan 27 06:03 HITS.48317952._000672.pool.root.1
[2026-01-27 06:05:00] -rw-r--r--. 1 boincer umatlas       531 Jan 27 06:03 boinc_task_state.xml
[2026-01-27 06:05:00] -rw-------. 1 boincer umatlas      1040 Jan 27 06:03 memory_monitor_summary.json
[2026-01-27 06:05:00] -rw-------. 1 boincer umatlas   1516246 Jan 27 06:03 agis_ddmendpoints.agis.ALL.json
[2026-01-27 06:05:00] -rw-------. 1 boincer umatlas    658899 Jan 27 06:03 log.48317952._000672.job.log.tgz.1
[2026-01-27 06:05:00] -rw-------. 1 boincer umatlas      6386 Jan 27 06:04 heartbeat.json
[2026-01-27 06:05:00] -rw-------. 1 boincer umatlas        95 Jan 27 06:04 pilot_heartbeat.json
[2026-01-27 06:05:00] -rw-------. 1 boincer umatlas      4819 Jan 27 06:04 pilotlog.txt
[2026-01-27 06:05:00] -rw-r--r--. 1 boincer umatlas      8192 Jan 27 06:04 boinc_mmap_file
[2026-01-27 06:05:00] -rw-r--r--. 1 boincer umatlas        28 Jan 27 06:04 wrapper_checkpoint.txt
[2026-01-27 06:05:00] -rw-------. 1 boincer umatlas   2882847 Jan 27 06:05 log.48317952._000672.job.log.1
[2026-01-27 06:05:00] -rw-------. 1 boincer umatlas       357 Jan 27 06:05 output.list
[2026-01-27 06:05:00] -rw-r--r--. 1 boincer umatlas       620 Jan 27 06:05 runtime_log
[2026-01-27 06:05:00] -rw-------. 1 boincer umatlas   3563520 Jan 27 06:05 result.tar.gz
[2026-01-27 06:05:00] -rw-------. 1 boincer umatlas       657 Jan 27 06:05 yEZMDmONW48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmLP9KDm1LlWBo.diag
[2026-01-27 06:05:00] -rw-r--r--. 1 boincer umatlas      9349 Jan 27 06:05 runtime_log.err
[2026-01-27 06:05:00] -rw-r--r--. 1 boincer umatlas     21130 Jan 27 06:05 stderr.txt
[2026-01-27 06:05:00] HITS file was successfully produced:
[2026-01-27 06:05:00] -rw-------. 1 boincer umatlas 180935231 Jan 27 06:03 shared/HITS.pool.root.1
[2026-01-27 06:05:00]  *** Contents of shared directory: ***
[2026-01-27 06:05:00] total 669604
[2026-01-27 06:05:00] -rw-r--r--. 2 boincer umatlas 500551900 Jan 27 00:02 ATLAS.root_0
[2026-01-27 06:05:00] -rw-r--r--. 2 boincer umatlas    597754 Jan 27 00:02 input.tar.gz
[2026-01-27 06:05:00] -rw-r--r--. 2 boincer umatlas     15845 Jan 27 00:02 start_atlas.sh
[2026-01-27 06:05:00] -rw-------. 1 boincer umatlas 180935231 Jan 27 06:03 HITS.pool.root.1
[2026-01-27 06:05:00] -rw-------. 1 boincer umatlas   3563520 Jan 27 06:05 result.tar.gz
06:05:02 (110060): run_atlas exited; CPU time 42624.245649
06:05:02 (110060): called boinc_finish(0)

</stderr_txt>
]]>

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