Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:42:06 (9560): wrapper (7.7.26015): starting
13:42:06 (9560): wrapper: running run_atlas (--nthreads 8)
[2026-01-27 13:42:06] Arguments: --nthreads 8
[2026-01-27 13:42:06] Threads: 8
[2026-01-27 13:42:06] Checking for CVMFS
[2026-01-27 13:42:07] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-27 13:42:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-27 13:42:08] Running cvmfs_config stat atlas.cern.ch
[2026-01-27 13:42:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-27 13:42:09] 2.11.2.0 26158 61348 133676 155585 1 93 15042508 25165825 1088 130560 0 12928685 99.705 16482602 2175 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-27 13:42:09] CVMFS is ok
[2026-01-27 13:42:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-27 13:42:09] Checking for apptainer binary...
[2026-01-27 13:42:09] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-27 13:42:09] Running /usr/bin/apptainer --version
[2026-01-27 13:42:10] apptainer version 1.3.2-1.el7
[2026-01-27 13:42:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-27 13:42:26] cg-vwn378.simple-grid.lan
[2026-01-27 13:42:26] apptainer works
[2026-01-27 13:42:26] Set ATHENA_PROC_NUMBER=8
[2026-01-27 13:42:26] Set ATHENA_CORE_NUMBER=8
[2026-01-27 13:42:26] Starting ATLAS job with PandaID=6984063151
[2026-01-27 13:42:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 17:38:17]  *** The last 200 lines of the pilot log: ***
[2026-01-27 17:38:17] 2026-01-27 16:37:39,663 | INFO     | total number of processed events: 400 (read)
[2026-01-27 17:38:17] 2026-01-27 16:37:39,665 | INFO     | using path: /var/lib/boinc/slots/12/PanDA_Pilot-6984063151/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 17:38:17] 2026-01-27 16:37:39,666 | INFO     | extracted standard info from prmon json
[2026-01-27 17:38:17] 2026-01-27 16:37:39,666 | INFO     | extracted standard memory fields from prmon json
[2026-01-27 17:38:17] 2026-01-27 16:37:39,666 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-27 17:38:17] 2026-01-27 16:37:39,666 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-27 17:38:17] 2026-01-27 16:37:39,666 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-27 17:38:17] 2026-01-27 16:37:39,671 | INFO     | fitting pss+swap vs Time
[2026-01-27 17:38:17] 2026-01-27 16:37:39,672 | INFO     | sum of square deviations: 3346927870.0
[2026-01-27 17:38:17] 2026-01-27 16:37:39,673 | INFO     | sum of deviations: 91670702705.00002
[2026-01-27 17:38:17] 2026-01-27 16:37:39,674 | INFO     | mean x: 1769525111.0
[2026-01-27 17:38:17] 2026-01-27 16:37:39,674 | INFO     | mean y: 2425831.4615384615
[2026-01-27 17:38:17] 2026-01-27 16:37:39,674 | INFO     | intersect: -48463993727.05531
[2026-01-27 17:38:17] 2026-01-27 16:37:39,674 | INFO     | chi2: 6.95417204345447
[2026-01-27 17:38:17] 2026-01-27 16:37:39,675 | INFO     | sum of square deviations: 3124858590.0
[2026-01-27 17:38:17] 2026-01-27 16:37:39,677 | INFO     | sum of deviations: 103960557138.5
[2026-01-27 17:38:17] 2026-01-27 16:37:39,677 | INFO     | mean x: 1769524958.5
[2026-01-27 17:38:17] 2026-01-27 16:37:39,677 | INFO     | mean y: 2434086.4953703703
[2026-01-27 17:38:17] 2026-01-27 16:37:39,677 | INFO     | intersect: -58867686035.04943
[2026-01-27 17:38:17] 2026-01-27 16:37:39,677 | INFO     | chi2: 6.245158768784752
[2026-01-27 17:38:17] 2026-01-27 16:37:39,678 | INFO     | current chi2=6.245158768784752 (change=10.195509547927676 %)
[2026-01-27 17:38:17] 2026-01-27 16:37:39,678 | INFO     | right removable region: 215
[2026-01-27 17:38:17] 2026-01-27 16:37:39,683 | INFO     | sum of square deviations: 3124858590.0
[2026-01-27 17:38:17] 2026-01-27 16:37:39,685 | INFO     | sum of deviations: 17558685909.99999
[2026-01-27 17:38:17] 2026-01-27 16:37:39,685 | INFO     | mean x: 1769525263.5
[2026-01-27 17:38:17] 2026-01-27 16:37:39,685 | INFO     | mean y: 2476680.611111111
[2026-01-27 17:38:17] 2026-01-27 16:37:39,686 | INFO     | intersect: -9940545512.788837
[2026-01-27 17:38:17] 2026-01-27 16:37:39,686 | INFO     | chi2: 2.351400835650093
[2026-01-27 17:38:17] 2026-01-27 16:37:39,686 | INFO     | current chi2=2.351400835650093 (change=66.18719207754832 %)
[2026-01-27 17:38:17] 2026-01-27 16:37:39,687 | INFO     | sum of square deviations: 2912836010.0
[2026-01-27 17:38:17] 2026-01-27 16:37:39,688 | INFO     | sum of deviations: -20980675073.0
[2026-01-27 17:38:17] 2026-01-27 16:37:39,689 | INFO     | mean x: 1769525416.0
[2026-01-27 17:38:17] 2026-01-27 16:37:39,689 | INFO     | mean y: 2504218.4691943126
[2026-01-27 17:38:17] 2026-01-27 16:37:39,689 | INFO     | intersect: 12748102549.11849
[2026-01-27 17:38:17] 2026-01-27 16:37:39,689 | INFO     | chi2: 0.8787506787960946
[2026-01-27 17:38:17] 2026-01-27 16:37:39,689 | INFO     | current chi2=0.8787506787960946 (change=62.6286311770768 %)
[2026-01-27 17:38:17] 2026-01-27 16:37:39,690 | INFO     | sum of square deviations: 2710627567.5
[2026-01-27 17:38:17] 2026-01-27 16:37:39,691 | INFO     | sum of deviations: -18615334772.5
[2026-01-27 17:38:17] 2026-01-27 16:37:39,692 | INFO     | mean x: 1769525568.5
[2026-01-27 17:38:17] 2026-01-27 16:37:39,692 | INFO     | mean y: 2502385.6844660193
[2026-01-27 17:38:17] 2026-01-27 16:37:39,692 | INFO     | intersect: 12154784477.505213
[2026-01-27 17:38:17] 2026-01-27 16:37:39,692 | INFO     | chi2: 0.8567607978446747
[2026-01-27 17:38:17] 2026-01-27 16:37:39,692 | INFO     | current chi2=0.8567607978446747 (change=2.5024027271929294 %)
[2026-01-27 17:38:17] 2026-01-27 16:37:39,692 | INFO     | left removable region: 30
[2026-01-27 17:38:17] 2026-01-27 16:37:39,693 | INFO     | sum of square deviations: 1963274020.0
[2026-01-27 17:38:17] 2026-01-27 16:37:39,694 | INFO     | sum of deviations: 3665772186.0
[2026-01-27 17:38:17] 2026-01-27 16:37:39,694 | INFO     | mean x: 1769525843.0
[2026-01-27 17:38:17] 2026-01-27 16:37:39,694 | INFO     | mean y: 2506125.9945945945
[2026-01-27 17:38:17] 2026-01-27 16:37:39,695 | INFO     | intersect: -3301504700.6130958
[2026-01-27 17:38:17] 2026-01-27 16:37:39,695 | INFO     | chi2: 0.0008242151079568781
[2026-01-27 17:38:17] 2026-01-27 16:37:39,695 | INFO     | current memory leak: 1.87 B/s (using 185 data points, chi2=0.00)
[2026-01-27 17:38:17] 2026-01-27 16:37:39,696 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2026-01-27 17:38:17] 2026-01-27 16:37:39,696 | INFO     | ..............................
[2026-01-27 17:38:17] 2026-01-27 16:37:39,696 | INFO     | . Timing measurements:
[2026-01-27 17:38:17] 2026-01-27 16:37:39,696 | INFO     | . get job = 0 s
[2026-01-27 17:38:17] 2026-01-27 16:37:39,696 | INFO     | . initial setup = 122 s
[2026-01-27 17:38:17] 2026-01-27 16:37:39,696 | INFO     | . payload setup = 144 s
[2026-01-27 17:38:17] 2026-01-27 16:37:39,696 | INFO     | . stage-in = 0 s
[2026-01-27 17:38:17] 2026-01-27 16:37:39,697 | INFO     | . payload execution = 13575 s
[2026-01-27 17:38:17] 2026-01-27 16:37:39,697 | INFO     | . stage-out = 3 s
[2026-01-27 17:38:17] 2026-01-27 16:37:39,697 | INFO     | . log creation = 1 s
[2026-01-27 17:38:17] 2026-01-27 16:37:39,697 | INFO     | ..............................
[2026-01-27 17:38:17] 2026-01-27 16:37:40,017 | INFO     | 
[2026-01-27 17:38:17] 2026-01-27 16:37:40,018 | INFO     | job summary report
[2026-01-27 17:38:17] 2026-01-27 16:37:40,018 | INFO     | --------------------------------------------------
[2026-01-27 17:38:17] 2026-01-27 16:37:40,018 | INFO     | PanDA job id: 6984063151
[2026-01-27 17:38:17] 2026-01-27 16:37:40,018 | INFO     | task id: 48317952
[2026-01-27 17:38:17] 2026-01-27 16:37:40,018 | INFO     | errors: (none)
[2026-01-27 17:38:17] 2026-01-27 16:37:40,018 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-27 17:38:17] 2026-01-27 16:37:40,018 | INFO     | pilot state: finished 
[2026-01-27 17:38:17] 2026-01-27 16:37:40,018 | INFO     | transexitcode: 0
[2026-01-27 17:38:17] 2026-01-27 16:37:40,018 | INFO     | exeerrorcode: 0
[2026-01-27 17:38:17] 2026-01-27 16:37:40,018 | INFO     | exeerrordiag: 
[2026-01-27 17:38:17] 2026-01-27 16:37:40,018 | INFO     | exitcode: 0
[2026-01-27 17:38:17] 2026-01-27 16:37:40,019 | INFO     | exitmsg: OK
[2026-01-27 17:38:17] 2026-01-27 16:37:40,019 | INFO     | cpuconsumptiontime: 61688 s
[2026-01-27 17:38:17] 2026-01-27 16:37:40,019 | INFO     | nevents: 400
[2026-01-27 17:38:17] 2026-01-27 16:37:40,019 | INFO     | neventsw: 0
[2026-01-27 17:38:17] 2026-01-27 16:37:40,019 | INFO     | pid: 18016
[2026-01-27 17:38:17] 2026-01-27 16:37:40,019 | INFO     | pgrp: 18016
[2026-01-27 17:38:17] 2026-01-27 16:37:40,019 | INFO     | corecount: 8
[2026-01-27 17:38:17] 2026-01-27 16:37:40,019 | INFO     | event service: False
[2026-01-27 17:38:17] 2026-01-27 16:37:40,019 | INFO     | sizes: {0: 2283801, 1: 2284262, 12: 2284262, 13724: 2314638, 13725: 2314637, 13729: 2323693, 13731: 2323877, 13733: 2324071}
[2026-01-27 17:38:17] 2026-01-27 16:37:40,019 | INFO     | --------------------------------------------------
[2026-01-27 17:38:17] 2026-01-27 16:37:40,019 | INFO     | 
[2026-01-27 17:38:17] 2026-01-27 16:37:40,020 | INFO     | executing command: ls -lF /var/lib/boinc/slots/12
[2026-01-27 17:38:17] 2026-01-27 16:37:40,527 | INFO     | time since job start (13746s) is within the limit (349056.0s)
[2026-01-27 17:38:17] 2026-01-27 16:37:40,618 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-27 17:38:17] 2026-01-27 16:37:40,618 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-27 17:38:17] 2026-01-27 16:37:40,618 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-27 17:38:17] 2026-01-27 16:37:40,618 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-27 17:38:17] 2026-01-27 16:37:40,618 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-27 17:38:17] 2026-01-27 16:37:40,618 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-27 17:38:17] 2026-01-27 16:37:40,619 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-27 17:38:17] 2026-01-27 16:37:40,619 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-27 17:38:17] 2026-01-27 16:37:40,619 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-27 17:38:17] 2026-01-27 16:37:40,619 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-27 17:38:17] 2026-01-27 16:37:40,619 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-27 17:38:17] 2026-01-27 16:37:40,619 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-27 17:38:17] 2026-01-27 16:37:40,619 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-27 17:38:17] 2026-01-27 16:37:40,619 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-27 17:38:17] 2026-01-27 16:37:40,620 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-27 17:38:17] 2026-01-27 16:37:40,620 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-27 17:38:17] 2026-01-27 16:37:40,620 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-27 17:38:17] 2026-01-27 16:37:40,620 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-27 17:38:17] 2026-01-27 16:37:40,620 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-27 17:38:17] 2026-01-27 16:37:40,620 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-27 17:38:17] 2026-01-27 16:37:40,620 | INFO     | job 6984063151 has completed (purged errors)
[2026-01-27 17:38:17] 2026-01-27 16:37:40,621 | INFO     | overall cleanup function is called
[2026-01-27 17:38:17] 2026-01-27 16:37:41,629 | INFO     | --- collectZombieJob: --- 10, [18016]
[2026-01-27 17:38:17] 2026-01-27 16:37:41,629 | INFO     | zombie collector waiting for pid 18016
[2026-01-27 17:38:17] 2026-01-27 16:37:41,630 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 17:38:17] 2026-01-27 16:37:41,630 | INFO     | collected zombie processes
[2026-01-27 17:38:17] 2026-01-27 16:37:41,630 | INFO     | will attempt to kill all subprocesses of pid=18016
[2026-01-27 17:38:17] 2026-01-27 16:37:41,711 | INFO     | process IDs to be killed: [18016] (in reverse order)
[2026-01-27 17:38:17] 2026-01-27 16:37:42,193 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 17:38:17] 2026-01-27 16:37:42,193 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 17:38:17] 2026-01-27 16:37:42,196 | INFO     | did not find any defunct processes belonging to 18016
[2026-01-27 17:38:17] 2026-01-27 16:37:42,197 | INFO     | did not find any defunct processes belonging to 18016
[2026-01-27 17:38:17] 2026-01-27 16:37:42,198 | INFO     | ready for new job
[2026-01-27 17:38:17] 2026-01-27 16:37:42,198 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 17:38:17] 2026-01-27 16:37:42,200 | INFO     | **************************************
[2026-01-27 17:38:17] 2026-01-27 16:37:42,200 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 17:38:17] 2026-01-27 16:37:42,200 | INFO     | **************************************
[2026-01-27 17:38:17] 2026-01-27 16:37:42,200 | INFO     | 
[2026-01-27 17:38:17] 2026-01-27 16:37:42,201 | INFO     | pilot is running in a VM
[2026-01-27 17:38:17] 2026-01-27 16:37:42,201 | INFO     | architecture information:
[2026-01-27 17:38:17] 2026-01-27 16:37:42,212 | INFO     | executing command: cat /etc/os-release
[2026-01-27 17:38:17] 2026-01-27 16:37:42,514 | INFO     | cat /etc/os-release:
[2026-01-27 17:38:17] NAME="CentOS Linux"
[2026-01-27 17:38:17] VERSION="7 (Core)"
[2026-01-27 17:38:17] ID="centos"
[2026-01-27 17:38:17] ID_LIKE="rhel fedora"
[2026-01-27 17:38:17] VERSION_ID="7"
[2026-01-27 17:38:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 17:38:17] ANSI_COLOR="0;31"
[2026-01-27 17:38:17] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 17:38:17] HOME_URL="https://www.centos.org/"
[2026-01-27 17:38:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 17:38:17] 
[2026-01-27 17:38:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 17:38:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 17:38:17] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 17:38:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 17:38:17] 
[2026-01-27 17:38:17] 2026-01-27 16:37:42,514 | INFO     | **************************************
[2026-01-27 17:38:17] 2026-01-27 16:37:43,017 | INFO     | executing command: df -mP /var/lib/boinc/slots/12
[2026-01-27 17:38:17] 2026-01-27 16:37:43,316 | INFO     | sufficient remaining disk space (496733519872 B)
[2026-01-27 17:38:17] 2026-01-27 16:37:43,316 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 17:38:17] 2026-01-27 16:37:43,316 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 17:38:17] 2026-01-27 16:37:43,317 | INFO     | update_server=False
[2026-01-27 17:38:17] 2026-01-27 16:37:43,317 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 17:38:17] 2026-01-27 16:37:43,380 | INFO     | all payload control threads have been joined
[2026-01-27 17:38:17] 2026-01-27 16:37:43,388 | INFO     | all data control threads have been joined
[2026-01-27 17:38:17] 2026-01-27 16:37:43,970 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 17:38:17] 2026-01-27 16:37:43,971 | INFO     | aborting loop
[2026-01-27 17:38:17] 2026-01-27 16:37:44,236 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 17:38:17] 2026-01-27 16:37:44,322 | INFO     | [job] retrieve thread has finished
[2026-01-27 17:38:17] 2026-01-27 16:37:44,386 | INFO     | [payload] control thread has finished
[2026-01-27 17:38:17] 2026-01-27 16:37:44,394 | INFO     | [data] control thread has finished
[2026-01-27 17:38:17] 2026-01-27 16:37:44,410 | INFO     | [data] copytool_in thread has finished
[2026-01-27 17:38:17] 2026-01-27 16:37:44,434 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 17:38:17] 2026-01-27 16:37:44,603 | INFO     | all job control threads have been joined
[2026-01-27 17:38:17] 2026-01-27 16:37:44,644 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 17:38:17] 2026-01-27 16:37:44,906 | INFO     | [job] validate thread has finished
[2026-01-27 17:38:17] 2026-01-27 16:37:44,929 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 17:38:17] 2026-01-27 16:37:44,976 | INFO     | [job] job monitor thread has finished
[2026-01-27 17:38:17] 2026-01-27 16:37:45,243 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 17:38:17] 2026-01-27 16:37:45,316 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 17:38:17] 2026-01-27 16:37:45,609 | INFO     | [job] control thread has finished
[2026-01-27 17:38:17] 2026-01-27 16:37:45,696 | INFO     | [payload] failed_post thread has finished
[2026-01-27 17:38:17] 2026-01-27 16:37:45,746 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 17:38:17] 2026-01-27 16:37:45,921 | INFO     | [payload] validate_post thread has finished
[2026-01-27 17:38:17] 2026-01-27 16:37:45,935 | INFO     | [job] queue monitor thread has finished
[2026-01-27 17:38:17] 2026-01-27 16:37:46,243 | INFO     | [data] copytool_out thread has finished
[2026-01-27 17:38:17] 2026-01-27 16:37:48,653 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 17:38:17] 2026-01-27 16:37:57,265 | INFO     | [monitor] cgroup control has ended
[2026-01-27 17:38:17] 2026-01-27 16:37:58,667 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140359666067264)>', '<ExcThread(monitor, started 140359220832000)>']
[2026-01-27 17:38:17] 2026-01-27 16:38:03,693 | INFO     | all workflow threads have been joined
[2026-01-27 17:38:17] 2026-01-27 16:38:03,694 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 17:38:17] 2026-01-27 16:38:03,694 | INFO     | traces error code: 0
[2026-01-27 17:38:17] 2026-01-27 16:38:03,694 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 17:38:17] 2026-01-27 16:38:13,647 | INFO     | PID=13541 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-27 17:38:17] 2026-01-27 16:38:13,647 | INFO     | .. there are 2 such processes running
[2026-01-27 17:38:17] 2026-01-27 16:38:13,649 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 17:38:17] 2026-01-27 16:38:13,649 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 17:38:17] 2026-01-27 16:38:13,649 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 17:38:17] 2026-01-27 16:38:13,649 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 17:38:17] 2026-01-27 16:38:13,649 | CRITICAL | thread 'MainThread' is not alive
[2026-01-27 17:38:17] 2026-01-27 16:38:13,649 | INFO     | [monitor] control thread has ended
[2026-01-27 17:38:17] 2026-01-27 16:38:14,039 [wrapper] ==== pilot stdout END ====
[2026-01-27 17:38:17] 2026-01-27 16:38:14,089 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 17:38:17] 2026-01-27 16:38:14,157 [wrapper] pilotpid: 13541
[2026-01-27 17:38:17] 2026-01-27 16:38:14,262 [wrapper] Pilot exit status: 0
[2026-01-27 17:38:17] 2026-01-27 16:38:14,755 [wrapper] pandaids: 6984063151
[2026-01-27 17:38:17] 2026-01-27 16:38:15,870 [wrapper] cleanup supervisor_pilot 10685 13542
[2026-01-27 17:38:17] 2026-01-27 16:38:15,956 [wrapper] Test setup, not cleaning
[2026-01-27 17:38:17] 2026-01-27 16:38:16,087 [wrapper] apfmon messages muted
[2026-01-27 17:38:17] 2026-01-27 16:38:16,206 [wrapper] ==== wrapper stdout END ====
[2026-01-27 17:38:17] 2026-01-27 16:38:16,339 [wrapper] ==== wrapper stderr END ====
[2026-01-27 17:38:17]  *** Error codes and diagnostics ***
[2026-01-27 17:38:17]     "exeErrorCode": 0,
[2026-01-27 17:38:17]     "exeErrorDiag": "",
[2026-01-27 17:38:17]     "pilotErrorCode": 0,
[2026-01-27 17:38:17]     "pilotErrorDiag": "",
[2026-01-27 17:38:17]  *** Listing of results directory ***
[2026-01-27 17:38:17] total 674396
[2026-01-27 17:38:17] -rw-r--r--. 1 boinc boinc    584422 Jan 26 08:37 pilot3.tar.gz
[2026-01-27 17:38:17] -rwx------. 1 boinc boinc     36322 Jan 26 08:39 runpilot2-wrapper.sh
[2026-01-27 17:38:17] -rw-r--r--. 1 boinc boinc      5111 Jan 26 08:40 queuedata.json
[2026-01-27 17:38:17] -rw-r--r--. 1 boinc boinc       100 Jan 27 13:42 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 17:38:17] -rwxr-xr-x. 1 boinc boinc      7986 Jan 27 13:42 run_atlas
[2026-01-27 17:38:17] -rw-r--r--. 1 boinc boinc       105 Jan 27 13:42 job.xml
[2026-01-27 17:38:17] -rw-r--r--. 1 boinc boinc      6392 Jan 27 13:42 init_data.xml
[2026-01-27 17:38:17] -rw-r--r--. 2 boinc boinc 498612163 Jan 27 13:42 EVNT.48317949._000012.pool.root.1
[2026-01-27 17:38:17] -rw-r--r--. 2 boinc boinc     15845 Jan 27 13:42 start_atlas.sh
[2026-01-27 17:38:17] drwxrwx--x. 2 boinc boinc        68 Jan 27 13:42 shared
[2026-01-27 17:38:17] -rw-r--r--. 2 boinc boinc    597753 Jan 27 13:42 input.tar.gz
[2026-01-27 17:38:17] -rw-r--r--. 1 boinc boinc         0 Jan 27 13:42 boinc_lockfile
[2026-01-27 17:38:17] -rw-r--r--. 1 boinc boinc      2517 Jan 27 13:42 pandaJob.out
[2026-01-27 17:38:17] -rw-------. 1 boinc boinc       415 Jan 27 13:48 workernode_map.json
[2026-01-27 17:38:17] -rw-------. 1 boinc boinc   1002845 Jan 27 13:48 agis_schedconf.cvmfs.json
[2026-01-27 17:38:17] drwx------. 5 boinc boinc      4096 Jan 27 13:48 pilot3
[2026-01-27 17:38:17] -rw-------. 1 boinc boinc 183180248 Jan 27 17:36 HITS.48317952._000611.pool.root.1
[2026-01-27 17:38:17] -rw-r--r--. 1 boinc boinc       532 Jan 27 17:36 boinc_task_state.xml
[2026-01-27 17:38:17] -rw-------. 1 boinc boinc      1021 Jan 27 17:37 memory_monitor_summary.json
[2026-01-27 17:38:17] -rw-------. 1 boinc boinc   1516246 Jan 27 17:37 agis_ddmendpoints.agis.ALL.json
[2026-01-27 17:38:17] -rw-------. 1 boinc boinc    487106 Jan 27 17:37 log.48317952._000611.job.log.tgz.1
[2026-01-27 17:38:17] -rw-------. 1 boinc boinc      6326 Jan 27 17:37 heartbeat.json
[2026-01-27 17:38:17] -rw-------. 1 boinc boinc        95 Jan 27 17:38 pilot_heartbeat.json
[2026-01-27 17:38:17] -rw-------. 1 boinc boinc       890 Jan 27 17:38 pilotlog.txt
[2026-01-27 17:38:17] -rw-r--r--. 1 boinc boinc      8192 Jan 27 17:38 boinc_mmap_file
[2026-01-27 17:38:17] -rw-r--r--. 1 boinc boinc        28 Jan 27 17:38 wrapper_checkpoint.txt
[2026-01-27 17:38:17] -rw-------. 1 boinc boinc   1948429 Jan 27 17:38 log.48317952._000611.job.log.1
[2026-01-27 17:38:17] -rw-------. 1 boinc boinc       357 Jan 27 17:38 output.list
[2026-01-27 17:38:17] -rw-r--r--. 1 boinc boinc       620 Jan 27 17:38 runtime_log
[2026-01-27 17:38:17] -rw-------. 1 boinc boinc   2457600 Jan 27 17:38 result.tar.gz
[2026-01-27 17:38:17] -rw-r--r--. 1 boinc boinc      8832 Jan 27 17:38 runtime_log.err
[2026-01-27 17:38:17] -rw-------. 1 boinc boinc       655 Jan 27 17:38 RP4LDmONW48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmtO9KDmfyDPom.diag
[2026-01-27 17:38:17] -rw-r--r--. 1 boinc boinc     20703 Jan 27 17:38 stderr.txt
[2026-01-27 17:38:17] HITS file was successfully produced:
[2026-01-27 17:38:17] -rw-------. 1 boinc boinc 183180248 Jan 27 17:36 shared/HITS.pool.root.1
[2026-01-27 17:38:17]  *** Contents of shared directory: ***
[2026-01-27 17:38:17] total 668816
[2026-01-27 17:38:17] -rw-r--r--. 2 boinc boinc 498612163 Jan 27 13:42 ATLAS.root_0
[2026-01-27 17:38:17] -rw-r--r--. 2 boinc boinc     15845 Jan 27 13:42 start_atlas.sh
[2026-01-27 17:38:17] -rw-r--r--. 2 boinc boinc    597753 Jan 27 13:42 input.tar.gz
[2026-01-27 17:38:17] -rw-------. 1 boinc boinc 183180248 Jan 27 17:36 HITS.pool.root.1
[2026-01-27 17:38:17] -rw-------. 1 boinc boinc   2457600 Jan 27 17:38 result.tar.gz
17:38:19 (9560): run_atlas exited; CPU time 61827.227185
17:38:19 (9560): called boinc_finish(0)

</stderr_txt>
]]>

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