Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
07:16:10 (532741): wrapper (7.7.26015): starting
07:16:10 (532741): wrapper: running run_atlas (--nthreads 12)
[2026-01-27 07:16:10] Arguments: --nthreads 12
[2026-01-27 07:16:10] Threads: 12
[2026-01-27 07:16:10] Checking for CVMFS
[2026-01-27 07:16:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-27 07:16:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-27 07:16:12] Running cvmfs_config stat atlas.cern.ch
[2026-01-27 07:16:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-27 07:16:12] 2.13.3.0 6794 556 55144 155585 0 188 5482086 6144001 3150 130560 0 1694685 99.997 20962 368 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-27 07:16:12] CVMFS is ok
[2026-01-27 07:16:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-27 07:16:12] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-27 07:16:12] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-27 07:16:12] Further information can be found at the LHC@home message board.
[2026-01-27 07:16:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-27 07:16:12] Checking for apptainer binary...
[2026-01-27 07:16:12] apptainer is not installed, using version from CVMFS
[2026-01-27 07:16:12] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-27 07:16:13] XeonFire
[2026-01-27 07:16:13] apptainer works
[2026-01-27 07:16:13] Set ATHENA_PROC_NUMBER=12
[2026-01-27 07:16:13] Set ATHENA_CORE_NUMBER=12
[2026-01-27 07:16:13] Starting ATLAS job with PandaID=6984043690
[2026-01-27 07:16:13] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 08:18:53]  *** The last 200 lines of the pilot log: ***
[2026-01-27 08:18:53]  filesize=406221
[2026-01-27 08:18:53]  filetype=log
[2026-01-27 08:18:53]  guid=54f4f6f9-4989-4f75-b49c-793cd5a55723
[2026-01-27 08:18:53]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-01-27 08:18:53]  is_altstaged=None
[2026-01-27 08:18:53]  is_tar=False
[2026-01-27 08:18:53]  lfn=log.48317872._002358.job.log.tgz.1
[2026-01-27 08:18:53]  mtime=0
[2026-01-27 08:18:53]  protocol_id=None
[2026-01-27 08:18:53]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-27 08:18:53]  replicas=None
[2026-01-27 08:18:53]  scope=mc23_13p6TeV
[2026-01-27 08:18:53]  status=None
[2026-01-27 08:18:53]  status_code=0
[2026-01-27 08:18:53]  storage_token=
[2026-01-27 08:18:53]  surl=/var/lib/boinc-client/slots/7/PanDA_Pilot-6984043690/log.48317872._002358.job.log.tgz.1
[2026-01-27 08:18:53]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ee/98/log.48317872._002358.job.log.tgz.1
[2026-01-27 08:18:53]  workdir=None
[2026-01-27 08:18:53] ]
[2026-01-27 08:18:53] 2026-01-27 14:17:41,859 | INFO     | transferring file log.48317872._002358.job.log.tgz.1 from /var/lib/boinc-client/slots/7/PanDA_Pilot-6984043690/log.48317872._002358.job.log.tgz.1 to /var/lib/boinc
[2026-01-27 08:18:53] 2026-01-27 14:17:41,859 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/7/PanDA_Pilot-6984043690/log.48317872._002358.job.log.tgz.1 /var/lib/boinc-client/slots/7/log.483178
[2026-01-27 08:18:53] 2026-01-27 14:17:41,879 | INFO     | adding to output.list: log.48317872._002358.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ee/98/log.48317872._002358.job.log.tg
[2026-01-27 08:18:53] 2026-01-27 14:17:41,880 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-27 08:18:53] 2026-01-27 14:17:41,880 | INFO     | summary of transferred files:
[2026-01-27 08:18:53] 2026-01-27 14:17:41,881 | INFO     |  -- lfn=log.48317872._002358.job.log.tgz.1, status_code=0, status=transferred
[2026-01-27 08:18:53] 2026-01-27 14:17:41,881 | INFO     | stage-out finished correctly
[2026-01-27 08:18:53] 2026-01-27 14:17:42,724 | INFO     | monitor loop #269: job 0:6984043690 is in state 'finished'
[2026-01-27 08:18:53] 2026-01-27 14:17:42,724 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-27 08:18:53] 2026-01-27 14:17:42,964 | INFO     | time since job start (3661s) is within the limit (349056.0s)
[2026-01-27 08:18:53] 2026-01-27 14:17:44,329 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-27 08:18:53] 2026-01-27 14:17:44,764 | INFO     | job 6984043690 has state=finished
[2026-01-27 08:18:53] 2026-01-27 14:17:44,765 | INFO     | preparing for final server update for job 6984043690 in state='finished'
[2026-01-27 08:18:53] 2026-01-27 14:17:44,765 | INFO     | reading metadata from: /var/lib/boinc-client/slots/7/PanDA_Pilot-6984043690/jobReport.json
[2026-01-27 08:18:53] 2026-01-27 14:17:44,768 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/7/workernode_map.json
[2026-01-27 08:18:53] 2026-01-27 14:17:44,769 | INFO     | this job has now completed (state=finished)
[2026-01-27 08:18:53] 2026-01-27 14:17:44,769 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-27 08:18:53] 2026-01-27 14:17:44,769 | INFO     | log transfer has been attempted: DONE
[2026-01-27 08:18:53] 2026-01-27 14:17:44,770 | INFO     | job 6984043690 has finished - writing final server update
[2026-01-27 08:18:53] 2026-01-27 14:17:44,770 | INFO     | total number of processed events: 400 (read)
[2026-01-27 08:18:53] 2026-01-27 14:17:44,786 | INFO     | using path: /var/lib/boinc-client/slots/7/PanDA_Pilot-6984043690/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 08:18:53] 2026-01-27 14:17:44,787 | INFO     | extracted standard info from prmon json
[2026-01-27 08:18:53] 2026-01-27 14:17:44,787 | INFO     | extracted standard memory fields from prmon json
[2026-01-27 08:18:53] 2026-01-27 14:17:44,787 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-27 08:18:53] 2026-01-27 14:17:44,788 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-27 08:18:53] 2026-01-27 14:17:44,788 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-27 08:18:53] 2026-01-27 14:17:44,790 | INFO     | fitting pss+swap vs Time
[2026-01-27 08:18:53] 2026-01-27 14:17:44,790 | INFO     | sum of square deviations: 46147842.0
[2026-01-27 08:18:53] 2026-01-27 14:17:44,790 | INFO     | sum of deviations: -1508797058.0000002
[2026-01-27 08:18:53] 2026-01-27 14:17:44,790 | INFO     | mean x: 1769521714.0
[2026-01-27 08:18:53] 2026-01-27 14:17:44,791 | INFO     | mean y: 2815921.3396226414
[2026-01-27 08:18:53] 2026-01-27 14:17:44,791 | INFO     | intersect: 57857073898.350075
[2026-01-27 08:18:53] 2026-01-27 14:17:44,791 | INFO     | chi2: 0.06475935712473327
[2026-01-27 08:18:53] 2026-01-27 14:17:44,791 | INFO     | current memory leak: -32.69 B/s (using 53 data points, chi2=0.06)
[2026-01-27 08:18:53] 2026-01-27 14:17:44,791 | INFO     | could have reported an average CPU frequency of 2265 MHz (6 samples)
[2026-01-27 08:18:53] 2026-01-27 14:17:44,792 | INFO     | ..............................
[2026-01-27 08:18:53] 2026-01-27 14:17:44,792 | INFO     | . Timing measurements:
[2026-01-27 08:18:53] 2026-01-27 14:17:44,792 | INFO     | . get job = 0 s
[2026-01-27 08:18:53] 2026-01-27 14:17:44,792 | INFO     | . initial setup = 10 s
[2026-01-27 08:18:53] 2026-01-27 14:17:44,792 | INFO     | . payload setup = 5 s
[2026-01-27 08:18:53] 2026-01-27 14:17:44,792 | INFO     | . stage-in = 0 s
[2026-01-27 08:18:53] 2026-01-27 14:17:44,792 | INFO     | . payload execution = 3637 s
[2026-01-27 08:18:53] 2026-01-27 14:17:44,793 | INFO     | . stage-out = 0 s
[2026-01-27 08:18:53] 2026-01-27 14:17:44,793 | INFO     | . log creation = 0 s
[2026-01-27 08:18:53] 2026-01-27 14:17:44,793 | INFO     | ..............................
[2026-01-27 08:18:53] 2026-01-27 14:17:44,893 | INFO     | 
[2026-01-27 08:18:53] 2026-01-27 14:17:44,893 | INFO     | job summary report
[2026-01-27 08:18:53] 2026-01-27 14:17:44,893 | INFO     | --------------------------------------------------
[2026-01-27 08:18:53] 2026-01-27 14:17:44,893 | INFO     | PanDA job id: 6984043690
[2026-01-27 08:18:53] 2026-01-27 14:17:44,893 | INFO     | task id: 48317872
[2026-01-27 08:18:53] 2026-01-27 14:17:44,893 | INFO     | errors: (none)
[2026-01-27 08:18:53] 2026-01-27 14:17:44,893 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-27 08:18:53] 2026-01-27 14:17:44,893 | INFO     | pilot state: finished 
[2026-01-27 08:18:53] 2026-01-27 14:17:44,893 | INFO     | transexitcode: 0
[2026-01-27 08:18:53] 2026-01-27 14:17:44,893 | INFO     | exeerrorcode: 0
[2026-01-27 08:18:53] 2026-01-27 14:17:44,894 | INFO     | exeerrordiag: 
[2026-01-27 08:18:53] 2026-01-27 14:17:44,894 | INFO     | exitcode: 0
[2026-01-27 08:18:53] 2026-01-27 14:17:44,894 | INFO     | exitmsg: OK
[2026-01-27 08:18:53] 2026-01-27 14:17:44,894 | INFO     | cpuconsumptiontime: 36727 s
[2026-01-27 08:18:53] 2026-01-27 14:17:44,894 | INFO     | nevents: 400
[2026-01-27 08:18:53] 2026-01-27 14:17:44,894 | INFO     | neventsw: 0
[2026-01-27 08:18:53] 2026-01-27 14:17:44,894 | INFO     | pid: 541964
[2026-01-27 08:18:53] 2026-01-27 14:17:44,894 | INFO     | pgrp: 541964
[2026-01-27 08:18:53] 2026-01-27 14:17:44,894 | INFO     | corecount: 12
[2026-01-27 08:18:53] 2026-01-27 14:17:44,894 | INFO     | event service: False
[2026-01-27 08:18:53] 2026-01-27 14:17:44,894 | INFO     | sizes: {0: 2284239, 11: 2284239, 3647: 2309978, 3649: 2318990, 3651: 2319046, 3652: 2319240}
[2026-01-27 08:18:53] 2026-01-27 14:17:44,894 | INFO     | --------------------------------------------------
[2026-01-27 08:18:53] 2026-01-27 14:17:44,894 | INFO     | 
[2026-01-27 08:18:53] 2026-01-27 14:17:44,894 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/7
[2026-01-27 08:18:53] 2026-01-27 14:17:44,934 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-27 08:18:53] 2026-01-27 14:17:44,934 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-27 08:18:53] 2026-01-27 14:17:44,934 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-27 08:18:53] 2026-01-27 14:17:44,934 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-27 08:18:53] 2026-01-27 14:17:44,934 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-27 08:18:53] 2026-01-27 14:17:44,934 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-27 08:18:53] 2026-01-27 14:17:44,934 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-27 08:18:53] 2026-01-27 14:17:44,934 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-27 08:18:53] 2026-01-27 14:17:44,934 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-27 08:18:53] 2026-01-27 14:17:44,935 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-27 08:18:53] 2026-01-27 14:17:44,935 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-27 08:18:53] 2026-01-27 14:17:44,935 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-27 08:18:53] 2026-01-27 14:17:44,935 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-27 08:18:53] 2026-01-27 14:17:44,935 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-27 08:18:53] 2026-01-27 14:17:44,935 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-27 08:18:53] 2026-01-27 14:17:44,935 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-27 08:18:53] 2026-01-27 14:17:44,935 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-27 08:18:53] 2026-01-27 14:17:44,935 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-27 08:18:53] 2026-01-27 14:17:44,935 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-27 08:18:53] 2026-01-27 14:17:44,935 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-27 08:18:53] 2026-01-27 14:17:44,935 | INFO     | job 6984043690 has completed (purged errors)
[2026-01-27 08:18:53] 2026-01-27 14:17:44,935 | INFO     | overall cleanup function is called
[2026-01-27 08:18:53] 2026-01-27 14:17:45,942 | INFO     | --- collectZombieJob: --- 10, [541964]
[2026-01-27 08:18:53] 2026-01-27 14:17:45,943 | INFO     | zombie collector waiting for pid 541964
[2026-01-27 08:18:53] 2026-01-27 14:17:45,943 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 08:18:53] 2026-01-27 14:17:45,943 | INFO     | collected zombie processes
[2026-01-27 08:18:53] 2026-01-27 14:17:45,943 | INFO     | will attempt to kill all subprocesses of pid=541964
[2026-01-27 08:18:53] 2026-01-27 14:17:46,416 | INFO     | process IDs to be killed: [541964] (in reverse order)
[2026-01-27 08:18:53] 2026-01-27 14:17:46,554 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 08:18:53] 2026-01-27 14:17:46,555 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 08:18:53] 2026-01-27 14:17:46,562 | INFO     | did not find any defunct processes belonging to 541964
[2026-01-27 08:18:53] 2026-01-27 14:17:46,568 | INFO     | did not find any defunct processes belonging to 541964
[2026-01-27 08:18:53] 2026-01-27 14:17:46,568 | INFO     | ready for new job
[2026-01-27 08:18:53] 2026-01-27 14:17:46,568 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 08:18:53] 2026-01-27 14:17:46,569 | INFO     | **************************************
[2026-01-27 08:18:53] 2026-01-27 14:17:46,569 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 08:18:53] 2026-01-27 14:17:46,570 | INFO     | **************************************
[2026-01-27 08:18:53] 2026-01-27 14:17:46,570 | INFO     | 
[2026-01-27 08:18:53] 2026-01-27 14:17:46,573 | INFO     | architecture information:
[2026-01-27 08:18:53] 2026-01-27 14:17:46,573 | INFO     | executing command: cat /etc/os-release
[2026-01-27 08:18:53] 2026-01-27 14:17:46,589 | INFO     | cat /etc/os-release:
[2026-01-27 08:18:53] NAME="CentOS Linux"
[2026-01-27 08:18:53] VERSION="7 (Core)"
[2026-01-27 08:18:53] ID="centos"
[2026-01-27 08:18:53] ID_LIKE="rhel fedora"
[2026-01-27 08:18:53] VERSION_ID="7"
[2026-01-27 08:18:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 08:18:53] ANSI_COLOR="0;31"
[2026-01-27 08:18:53] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 08:18:53] HOME_URL="https://www.centos.org/"
[2026-01-27 08:18:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 08:18:53] 
[2026-01-27 08:18:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 08:18:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 08:18:53] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 08:18:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 08:18:53] 
[2026-01-27 08:18:53] 2026-01-27 14:17:46,590 | INFO     | **************************************
[2026-01-27 08:18:53] 2026-01-27 14:17:47,092 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/7
[2026-01-27 08:18:53] 2026-01-27 14:17:47,110 | INFO     | sufficient remaining disk space (1787745533952 B)
[2026-01-27 08:18:53] 2026-01-27 14:17:47,111 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 08:18:53] 2026-01-27 14:17:47,111 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 08:18:53] 2026-01-27 14:17:47,111 | INFO     | update_server=False
[2026-01-27 08:18:53] 2026-01-27 14:17:47,111 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 08:18:53] 2026-01-27 14:17:47,112 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 08:18:53] 2026-01-27 14:17:47,112 | INFO     | aborting loop
[2026-01-27 08:18:53] 2026-01-27 14:17:47,486 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 08:18:53] 2026-01-27 14:17:47,518 | INFO     | all job control threads have been joined
[2026-01-27 08:18:53] 2026-01-27 14:17:47,686 | INFO     | all payload control threads have been joined
[2026-01-27 08:18:53] 2026-01-27 14:17:47,801 | INFO     | all data control threads have been joined
[2026-01-27 08:18:53] 2026-01-27 14:17:48,117 | INFO     | [job] retrieve thread has finished
[2026-01-27 08:18:53] 2026-01-27 14:17:48,117 | INFO     | [job] job monitor thread has finished
[2026-01-27 08:18:53] 2026-01-27 14:17:48,264 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 08:18:53] 2026-01-27 14:17:48,342 | INFO     | [job] validate thread has finished
[2026-01-27 08:18:53] 2026-01-27 14:17:48,522 | INFO     | [job] control thread has finished
[2026-01-27 08:18:53] 2026-01-27 14:17:48,691 | INFO     | [payload] control thread has finished
[2026-01-27 08:18:53] 2026-01-27 14:17:48,806 | INFO     | [data] control thread has finished
[2026-01-27 08:18:53] 2026-01-27 14:17:48,858 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 08:18:53] 2026-01-27 14:17:48,876 | INFO     | [payload] validate_post thread has finished
[2026-01-27 08:18:53] 2026-01-27 14:17:49,152 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 08:18:53] 2026-01-27 14:17:49,256 | INFO     | [data] copytool_in thread has finished
[2026-01-27 08:18:53] 2026-01-27 14:17:49,492 | INFO     | [data] copytool_out thread has finished
[2026-01-27 08:18:53] 2026-01-27 14:17:49,603 | INFO     | [payload] failed_post thread has finished
[2026-01-27 08:18:53] 2026-01-27 14:17:49,902 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 08:18:53] 2026-01-27 14:17:50,406 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 08:18:53] 2026-01-27 14:17:50,908 | INFO     | [job] queue monitor thread has finished
[2026-01-27 08:18:53] 2026-01-27 14:17:54,410 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 08:18:53] 2026-01-27 14:17:57,582 | INFO     | job.realtimelogging is not enabled
[2026-01-27 08:18:53] 2026-01-27 14:17:58,587 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 08:18:53] 2026-01-27 14:18:16,565 | INFO     | PID=537128 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-27 08:18:53] 2026-01-27 14:18:16,565 | INFO     | .. there are 5 such processes running
[2026-01-27 08:18:53] 2026-01-27 14:18:16,566 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 08:18:53] 2026-01-27 14:18:16,566 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 08:18:53] 2026-01-27 14:18:16,567 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 08:18:53] 2026-01-27 14:18:46,310 | INFO     | [monitor] cgroup control has ended
[2026-01-27 08:18:53] 2026-01-27 14:18:47,007 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 127527314786112)>', '<ExcThread(monitor, started 127526986811136)>']
[2026-01-27 08:18:53] 2026-01-27 14:18:47,703 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 08:18:53] 2026-01-27 14:18:47,703 | INFO     | [monitor] control thread has ended
[2026-01-27 08:18:53] 2026-01-27 14:18:52,032 | INFO     | all workflow threads have been joined
[2026-01-27 08:18:53] 2026-01-27 14:18:52,032 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 08:18:53] 2026-01-27 14:18:52,033 | INFO     | traces error code: 0
[2026-01-27 08:18:53] 2026-01-27 14:18:52,033 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 08:18:53] 2026-01-27 14:18:52,124 [wrapper] ==== pilot stdout END ====
[2026-01-27 08:18:53] 2026-01-27 14:18:52,127 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 08:18:53] 2026-01-27 14:18:52,129 [wrapper] pilotpid: 537128
[2026-01-27 08:18:53] 2026-01-27 14:18:52,132 [wrapper] Pilot exit status: 0
[2026-01-27 08:18:53] 2026-01-27 14:18:52,142 [wrapper] pandaids: 6984043690
[2026-01-27 08:18:53] 2026-01-27 14:18:52,209 [wrapper] cleanup supervisor_pilot  606763 537129
[2026-01-27 08:18:53] 2026-01-27 14:18:52,214 [wrapper] Test setup, not cleaning
[2026-01-27 08:18:53] 2026-01-27 14:18:52,218 [wrapper] apfmon messages muted
[2026-01-27 08:18:53] 2026-01-27 14:18:52,222 [wrapper] ==== wrapper stdout END ====
[2026-01-27 08:18:53] 2026-01-27 14:18:52,226 [wrapper] ==== wrapper stderr END ====
[2026-01-27 08:18:53]  *** Error codes and diagnostics ***
[2026-01-27 08:18:53]     "exeErrorCode": 0,
[2026-01-27 08:18:53]     "exeErrorDiag": "",
[2026-01-27 08:18:53]     "pilotErrorCode": 0,
[2026-01-27 08:18:53]     "pilotErrorDiag": "",
[2026-01-27 08:18:53]  *** Listing of results directory ***
[2026-01-27 08:18:53] total 669172
[2026-01-27 08:18:53] -rw-r--r-- 1 mark mark    584422 Jan 25 23:14 pilot3.tar.gz
[2026-01-27 08:18:53] -rwx------ 1 mark mark     36322 Jan 25 23:14 runpilot2-wrapper.sh
[2026-01-27 08:18:53] -rw-r--r-- 1 mark mark      5111 Jan 25 23:15 queuedata.json
[2026-01-27 08:18:53] -rw-rw-r-- 1 mark mark       100 Jan 27 07:16 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 08:18:53] -rwxr-xr-x 1 mark mark      7986 Jan 27 07:16 run_atlas
[2026-01-27 08:18:53] -rw-rw-r-- 1 mark mark       105 Jan 27 07:16 job.xml
[2026-01-27 08:18:53] -rw-r--r-- 2 mark mark 492757001 Jan 27 07:16 EVNT.48317869._000047.pool.root.1
[2026-01-27 08:18:53] -rw-r--r-- 2 mark mark     15845 Jan 27 07:16 start_atlas.sh
[2026-01-27 08:18:53] drwxrwx--x 2 mark mark      4096 Jan 27 07:16 shared
[2026-01-27 08:18:53] -rw-r--r-- 2 mark mark    597746 Jan 27 07:16 input.tar.gz
[2026-01-27 08:18:53] -rw-rw-r-- 1 mark mark      9265 Jan 27 07:16 init_data.xml
[2026-01-27 08:18:53] -rw-rw-r-- 1 mark mark         0 Jan 27 07:16 boinc_setup_complete
[2026-01-27 08:18:53] -rw-rw-r-- 1 mark mark         0 Jan 27 07:16 boinc_lockfile
[2026-01-27 08:18:53] -rw-rw-r-- 1 mark mark      2514 Jan 27 07:16 pandaJob.out
[2026-01-27 08:18:53] -rw------- 1 mark mark   1002845 Jan 27 07:16 agis_schedconf.cvmfs.json
[2026-01-27 08:18:53] -rw------- 1 mark mark   1516246 Jan 27 07:16 agis_ddmendpoints.agis.ALL.json
[2026-01-27 08:18:53] -rw------- 1 mark mark       431 Jan 27 07:16 workernode_map.json
[2026-01-27 08:18:53] drwx------ 5 mark mark      4096 Jan 27 07:16 pilot3
[2026-01-27 08:18:53] -rw------- 1 mark mark 186621812 Jan 27 08:17 HITS.48317872._002358.pool.root.1
[2026-01-27 08:18:53] -rw-rw-r-- 1 mark mark       530 Jan 27 08:17 boinc_task_state.xml
[2026-01-27 08:18:53] -rw------- 1 mark mark      1032 Jan 27 08:17 memory_monitor_summary.json
[2026-01-27 08:18:53] -rw------- 1 mark mark    406221 Jan 27 08:17 log.48317872._002358.job.log.tgz.1
[2026-01-27 08:18:53] -rw------- 1 mark mark      6340 Jan 27 08:17 heartbeat.json
[2026-01-27 08:18:53] -rw------- 1 mark mark        95 Jan 27 08:18 pilot_heartbeat.json
[2026-01-27 08:18:53] -rw-rw-r-- 1 mark mark      8192 Jan 27 08:18 boinc_mmap_file
[2026-01-27 08:18:53] -rw------- 1 mark mark      4899 Jan 27 08:18 pilotlog.txt
[2026-01-27 08:18:53] -rw-rw-r-- 1 mark mark        27 Jan 27 08:18 wrapper_checkpoint.txt
[2026-01-27 08:18:53] -rw------- 1 mark mark    546745 Jan 27 08:18 log.48317872._002358.job.log.1
[2026-01-27 08:18:53] -rw------- 1 mark mark       357 Jan 27 08:18 output.list
[2026-01-27 08:18:53] -rw-rw-r-- 1 mark mark       620 Jan 27 08:18 runtime_log
[2026-01-27 08:18:53] -rw------- 1 mark mark    972800 Jan 27 08:18 result.tar.gz
[2026-01-27 08:18:53] -rw-rw-r-- 1 mark mark      8886 Jan 27 08:18 runtime_log.err
[2026-01-27 08:18:53] -rw------- 1 mark mark       644 Jan 27 08:18 mZsMDm96T48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmH68KDm5xhtxn.diag
[2026-01-27 08:18:53] -rw-rw-r-- 1 mark mark     21305 Jan 27 08:18 stderr.txt
[2026-01-27 08:18:53] HITS file was successfully produced:
[2026-01-27 08:18:53] -rw------- 1 mark mark 186621812 Jan 27 08:17 shared/HITS.pool.root.1
[2026-01-27 08:18:53]  *** Contents of shared directory: ***
[2026-01-27 08:18:53] total 665020
[2026-01-27 08:18:53] -rw-r--r-- 2 mark mark 492757001 Jan 27 07:16 ATLAS.root_0
[2026-01-27 08:18:53] -rw-r--r-- 2 mark mark     15845 Jan 27 07:16 start_atlas.sh
[2026-01-27 08:18:53] -rw-r--r-- 2 mark mark    597746 Jan 27 07:16 input.tar.gz
[2026-01-27 08:18:53] -rw------- 1 mark mark 186621812 Jan 27 08:17 HITS.pool.root.1
[2026-01-27 08:18:53] -rw------- 1 mark mark    972800 Jan 27 08:18 result.tar.gz
08:18:55 (532741): run_atlas exited; CPU time 36895.929535
08:18:55 (532741): called boinc_finish(0)

</stderr_txt>
]]>

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