Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
15:24:41 (2399480): wrapper (7.7.26015): starting
15:24:41 (2399480): wrapper: running run_atlas (--nthreads 2)
[2026-01-27 15:24:41] Arguments: --nthreads 2
[2026-01-27 15:24:41] Threads: 2
[2026-01-27 15:24:41] Checking for CVMFS
[2026-01-27 15:24:41] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-27 15:24:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-27 15:24:41] Running cvmfs_config stat atlas.cern.ch
[2026-01-27 15:24:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-27 15:24:41] 2.9.2.0 1374182 9892 66924 155587 1 49 23822876 36864000 0 130560 0 2771577 99.979 321865 7759 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-27 15:24:41] CVMFS is ok
[2026-01-27 15:24:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-27 15:24:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-27 15:24:41] Further information can be found at the LHC@home message board.
[2026-01-27 15:24:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-27 15:24:41] Checking for apptainer binary...
[2026-01-27 15:24:41] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-27 15:24:41] Running /usr/bin/apptainer --version
[2026-01-27 15:24:41] apptainer version 1.4.1-1.1
[2026-01-27 15:24:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-27 15:24:42] thA310
[2026-01-27 15:24:42] apptainer works
[2026-01-27 15:24:42] Set ATHENA_PROC_NUMBER=2
[2026-01-27 15:24:42] Set ATHENA_CORE_NUMBER=2
[2026-01-27 15:24:42] Starting ATLAS job with PandaID=6984060973
[2026-01-27 15:24:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 17:36:18]  *** The last 200 lines of the pilot log: ***
[2026-01-27 17:36:18] 2026-01-27 16:35:32,709 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 17:36:18] 2026-01-27 16:35:32,710 | INFO     | collected zombie processes
[2026-01-27 17:36:18] 2026-01-27 16:35:32,710 | INFO     | will attempt to kill all subprocesses of pid=2407924
[2026-01-27 17:36:18] 2026-01-27 16:35:32,749 | INFO     | process IDs to be killed: [2407924] (in reverse order)
[2026-01-27 17:36:18] 2026-01-27 16:35:32,772 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 17:36:18] 2026-01-27 16:35:32,772 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 17:36:18] 2026-01-27 16:35:32,773 | INFO     | did not find any defunct processes belonging to 2407924
[2026-01-27 17:36:18] 2026-01-27 16:35:32,774 | INFO     | did not find any defunct processes belonging to 2407924
[2026-01-27 17:36:18] 2026-01-27 16:35:32,774 | INFO     | ready for new job
[2026-01-27 17:36:18] 2026-01-27 16:35:32,774 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 17:36:18] 2026-01-27 16:35:32,775 | INFO     | **************************************
[2026-01-27 17:36:18] 2026-01-27 16:35:32,775 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 17:36:18] 2026-01-27 16:35:32,775 | INFO     | **************************************
[2026-01-27 17:36:18] 2026-01-27 16:35:32,775 | INFO     | 
[2026-01-27 17:36:18] 2026-01-27 16:35:32,775 | INFO     | architecture information:
[2026-01-27 17:36:18] 2026-01-27 16:35:32,775 | INFO     | executing command: cat /etc/os-release
[2026-01-27 17:36:18] 2026-01-27 16:35:32,784 | INFO     | cat /etc/os-release:
[2026-01-27 17:36:18] NAME="CentOS Linux"
[2026-01-27 17:36:18] VERSION="7 (Core)"
[2026-01-27 17:36:18] ID="centos"
[2026-01-27 17:36:18] ID_LIKE="rhel fedora"
[2026-01-27 17:36:18] VERSION_ID="7"
[2026-01-27 17:36:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 17:36:18] ANSI_COLOR="0;31"
[2026-01-27 17:36:18] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 17:36:18] HOME_URL="https://www.centos.org/"
[2026-01-27 17:36:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 17:36:18] 
[2026-01-27 17:36:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 17:36:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 17:36:18] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 17:36:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 17:36:18] 
[2026-01-27 17:36:18] 2026-01-27 16:35:32,784 | INFO     | **************************************
[2026-01-27 17:36:18] 2026-01-27 16:35:33,287 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-27 17:36:18] 2026-01-27 16:35:33,299 | INFO     | sufficient remaining disk space (499824721920 B)
[2026-01-27 17:36:18] 2026-01-27 16:35:33,300 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 17:36:18] 2026-01-27 16:35:33,300 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 17:36:18] 2026-01-27 16:35:33,300 | INFO     | update_server=False
[2026-01-27 17:36:18] 2026-01-27 16:35:33,300 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 17:36:18] 2026-01-27 16:35:33,300 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 17:36:18] 2026-01-27 16:35:33,300 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 17:36:18] 2026-01-27 16:35:33,300 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 17:36:18] 2026-01-27 16:35:33,300 | INFO     | aborting loop
[2026-01-27 17:36:18] 2026-01-27 16:35:33,683 | INFO     | job.realtimelogging is not enabled
[2026-01-27 17:36:18] 2026-01-27 16:35:33,691 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 17:36:18] 2026-01-27 16:35:34,281 | INFO     | all data control threads have been joined
[2026-01-27 17:36:18] 2026-01-27 16:35:34,306 | INFO     | [job] retrieve thread has finished
[2026-01-27 17:36:18] 2026-01-27 16:35:34,306 | INFO     | [job] job monitor thread has finished
[2026-01-27 17:36:18] 2026-01-27 16:35:34,307 | INFO     | [job] queue monitor thread has finished
[2026-01-27 17:36:18] 2026-01-27 16:35:34,323 | INFO     | all job control threads have been joined
[2026-01-27 17:36:18] 2026-01-27 16:35:34,622 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 17:36:18] 2026-01-27 16:35:34,655 | INFO     | all payload control threads have been joined
[2026-01-27 17:36:18] 2026-01-27 16:35:34,689 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 17:36:18] 2026-01-27 16:35:34,753 | INFO     | [payload] failed_post thread has finished
[2026-01-27 17:36:18] 2026-01-27 16:35:35,194 | INFO     | [job] validate thread has finished
[2026-01-27 17:36:18] 2026-01-27 16:35:35,287 | INFO     | [data] control thread has finished
[2026-01-27 17:36:18] 2026-01-27 16:35:35,301 | INFO     | [payload] validate_post thread has finished
[2026-01-27 17:36:18] 2026-01-27 16:35:35,329 | INFO     | [job] control thread has finished
[2026-01-27 17:36:18] 2026-01-27 16:35:35,354 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 17:36:18] 2026-01-27 16:35:35,477 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 17:36:18] 2026-01-27 16:35:35,478 | INFO     | [data] copytool_in thread has finished
[2026-01-27 17:36:18] 2026-01-27 16:35:35,661 | INFO     | [payload] control thread has finished
[2026-01-27 17:36:18] 2026-01-27 16:35:35,696 | INFO     | [data] copytool_out thread has finished
[2026-01-27 17:36:18] 2026-01-27 16:35:37,307 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 17:36:18] 2026-01-27 16:36:03,164 | INFO     | PID=2403512 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-27 17:36:18] 2026-01-27 16:36:03,164 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 17:36:18] 2026-01-27 16:36:03,164 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 17:36:18] 2026-01-27 16:36:03,164 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 17:36:18] 2026-01-27 16:36:13,347 | INFO     | [monitor] cgroup control has ended
[2026-01-27 17:36:18] 2026-01-27 16:36:13,490 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140220347803456)>', '<ExcThread(monitor, started 140219860899584)>']
[2026-01-27 17:36:18] 2026-01-27 16:36:14,223 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 17:36:18] 2026-01-27 16:36:14,224 | INFO     | [monitor] control thread has ended
[2026-01-27 17:36:18] 2026-01-27 16:36:18,516 | INFO     | all workflow threads have been joined
[2026-01-27 17:36:18] 2026-01-27 16:36:18,517 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 17:36:18] 2026-01-27 16:36:18,517 | INFO     | traces error code: 0
[2026-01-27 17:36:18] 2026-01-27 16:36:18,518 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 17:36:18] 2026-01-27 16:36:18,562 [wrapper] ==== pilot stdout END ====
[2026-01-27 17:36:18] 2026-01-27 16:36:18,564 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 17:36:18] 2026-01-27 16:36:18,567 [wrapper] pilotpid: 2403512
[2026-01-27 17:36:18] 2026-01-27 16:36:18,569 [wrapper] Pilot exit status: 0
[2026-01-27 17:36:18] 2026-01-27 16:36:18,575 [wrapper] pandaids: 6984060973
[2026-01-27 17:36:18] 2026-01-27 16:36:18,589 [wrapper] cleanup supervisor_pilot 2414505 2403513
[2026-01-27 17:36:18] 2026-01-27 16:36:18,591 [wrapper] Test setup, not cleaning
[2026-01-27 17:36:18] 2026-01-27 16:36:18,593 [wrapper] apfmon messages muted
[2026-01-27 17:36:18] 2026-01-27 16:36:18,595 [wrapper] ==== wrapper stdout END ====
[2026-01-27 17:36:18] 2026-01-27 16:36:18,597 [wrapper] ==== wrapper stderr END ====
[2026-01-27 17:36:18]  *** Error codes and diagnostics ***
[2026-01-27 17:36:18]     "exeErrorCode": 0,
[2026-01-27 17:36:18]     "exeErrorDiag": "",
[2026-01-27 17:36:18]     "pilotErrorCode": 0,
[2026-01-27 17:36:18]     "pilotErrorDiag": "",
[2026-01-27 17:36:18]  *** Listing of results directory ***
[2026-01-27 17:36:18] total 671532
[2026-01-27 17:36:18] -rwx------ 1 boinc boinc     36322 Jan 26 06:18 runpilot2-wrapper.sh
[2026-01-27 17:36:18] -rw-r--r-- 1 boinc boinc      5111 Jan 26 06:23 queuedata.json
[2026-01-27 17:36:18] -rw-r--r-- 1 boinc boinc    584422 Jan 26 06:23 pilot3.tar.gz
[2026-01-27 17:36:18] -rw-r--r-- 1 boinc boinc       100 Jan 27 15:24 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 17:36:18] -rwxr-xr-x 1 boinc boinc      7986 Jan 27 15:24 run_atlas
[2026-01-27 17:36:18] -rw-r--r-- 1 boinc boinc       105 Jan 27 15:24 job.xml
[2026-01-27 17:36:18] -rw-r--r-- 2 boinc boinc 495045885 Jan 27 15:24 EVNT.48317869._000051.pool.root.1
[2026-01-27 17:36:18] drwxrwx--x 2 boinc boinc      4096 Jan 27 15:24 shared
[2026-01-27 17:36:18] -rw-r--r-- 2 boinc boinc    597756 Jan 27 15:24 input.tar.gz
[2026-01-27 17:36:18] -rw-r--r-- 2 boinc boinc     15845 Jan 27 15:24 start_atlas.sh
[2026-01-27 17:36:18] -rw-r--r-- 1 boinc boinc         0 Jan 27 15:24 boinc_setup_complete
[2026-01-27 17:36:18] -rw-r--r-- 1 boinc boinc      6206 Jan 27 15:24 init_data.xml
[2026-01-27 17:36:18] -rw-r--r-- 1 boinc boinc         0 Jan 27 15:24 boinc_lockfile
[2026-01-27 17:36:18] -rw-r--r-- 1 boinc boinc      2514 Jan 27 15:24 pandaJob.out
[2026-01-27 17:36:18] -rw------- 1 boinc boinc   1004450 Jan 27 15:24 agis_schedconf.cvmfs.json
[2026-01-27 17:36:18] -rw------- 1 boinc boinc   1516246 Jan 27 15:24 agis_ddmendpoints.agis.ALL.json
[2026-01-27 17:36:18] -rw------- 1 boinc boinc       416 Jan 27 15:25 workernode_map.json
[2026-01-27 17:36:18] drwx------ 5 boinc boinc      4096 Jan 27 15:25 pilot3
[2026-01-27 17:36:18] -rw------- 1 boinc boinc 185843367 Jan 27 17:35 HITS.48317872._002539.pool.root.1
[2026-01-27 17:36:18] -rw-r--r-- 1 boinc boinc       530 Jan 27 17:35 boinc_task_state.xml
[2026-01-27 17:36:18] -rw------- 1 boinc boinc      1016 Jan 27 17:35 memory_monitor_summary.json
[2026-01-27 17:36:18] -rw------- 1 boinc boinc    294152 Jan 27 17:35 log.48317872._002539.job.log.tgz.1
[2026-01-27 17:36:18] -rw------- 1 boinc boinc      6293 Jan 27 17:35 heartbeat.json
[2026-01-27 17:36:18] -rw-r--r-- 1 boinc boinc      8192 Jan 27 17:35 boinc_mmap_file
[2026-01-27 17:36:18] -rw-r--r-- 1 boinc boinc        27 Jan 27 17:35 wrapper_checkpoint.txt
[2026-01-27 17:36:18] -rw------- 1 boinc boinc        95 Jan 27 17:36 pilot_heartbeat.json
[2026-01-27 17:36:18] -rw------- 1 boinc boinc      4820 Jan 27 17:36 pilotlog.txt
[2026-01-27 17:36:18] -rw------- 1 boinc boinc   1122335 Jan 27 17:36 log.48317872._002539.job.log.1
[2026-01-27 17:36:18] -rw------- 1 boinc boinc       357 Jan 27 17:36 output.list
[2026-01-27 17:36:18] -rw-r--r-- 1 boinc boinc       620 Jan 27 17:36 runtime_log
[2026-01-27 17:36:18] -rw------- 1 boinc boinc   1433600 Jan 27 17:36 result.tar.gz
[2026-01-27 17:36:18] -rw-r--r-- 1 boinc boinc      8896 Jan 27 17:36 runtime_log.err
[2026-01-27 17:36:18] -rw------- 1 boinc boinc       657 Jan 27 17:36 ZS8KDmtAU48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmLk2KDmOkW12m.diag
[2026-01-27 17:36:18] -rw-r--r-- 1 boinc boinc     10505 Jan 27 17:36 stderr.txt
[2026-01-27 17:36:19] HITS file was successfully produced:
[2026-01-27 17:36:19] -rw------- 1 boinc boinc 185843367 Jan 27 17:35 shared/HITS.pool.root.1
[2026-01-27 17:36:19]  *** Contents of shared directory: ***
[2026-01-27 17:36:19] total 666940
[2026-01-27 17:36:19] -rw-r--r-- 2 boinc boinc 495045885 Jan 27 15:24 ATLAS.root_0
[2026-01-27 17:36:19] -rw-r--r-- 2 boinc boinc    597756 Jan 27 15:24 input.tar.gz
[2026-01-27 17:36:19] -rw-r--r-- 2 boinc boinc     15845 Jan 27 15:24 start_atlas.sh
[2026-01-27 17:36:19] -rw------- 1 boinc boinc 185843367 Jan 27 17:35 HITS.pool.root.1
[2026-01-27 17:36:19] -rw------- 1 boinc boinc   1433600 Jan 27 17:36 result.tar.gz
17:36:20 (2399480): run_atlas exited; CPU time 15262.150845
17:36:20 (2399480): called boinc_finish(0)

</stderr_txt>
]]>

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