Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
08:09:06 (2599): wrapper (7.7.26015): starting
08:09:06 (2599): wrapper: running run_atlas (--nthreads 8)
[2026-01-27 08:09:06] Arguments: --nthreads 8
[2026-01-27 08:09:06] Threads: 8
[2026-01-27 08:09:06] Checking for CVMFS
[2026-01-27 08:09:06] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-27 08:09:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-27 08:09:06] Running cvmfs_config stat atlas.cern.ch
[2026-01-27 08:09:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-27 08:09:06] 2.11.0.0 8101 154633 106436 155576 1 49 2511054 4096001 4585 130560 2 9328862 99.412 10034873 464 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-01-27 08:09:06] CVMFS is ok
[2026-01-27 08:09:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-27 08:09:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-27 08:09:06] Further information can be found at the LHC@home message board.
[2026-01-27 08:09:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-27 08:09:06] Checking for apptainer binary...
[2026-01-27 08:09:06] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-01-27 08:09:06] apptainer is not installed, using version from CVMFS
[2026-01-27 08:09:06] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-27 08:09:07] WARNING: Environment variable TMPDIR already has value [/tmp/job_11053974/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node232
[2026-01-27 08:09:07] apptainer works
[2026-01-27 08:09:07] Set ATHENA_PROC_NUMBER=8
[2026-01-27 08:09:07] Set ATHENA_CORE_NUMBER=8
[2026-01-27 08:09:07] Starting ATLAS job with PandaID=6983306276
[2026-01-27 08:09:07] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11053974/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 08:59:39]  *** The last 200 lines of the pilot log: ***
[2026-01-27 08:59:39]  replicas=None
[2026-01-27 08:59:39]  scope=mc23_13p6TeV
[2026-01-27 08:59:39]  status=None
[2026-01-27 08:59:39]  status_code=0
[2026-01-27 08:59:39]  storage_token=
[2026-01-27 08:59:39]  surl=/tmp/job_11053974/atlas/pilot/slots/0/PanDA_Pilot-6983306276/log.48318042._001434.job.log.tgz.1
[2026-01-27 08:59:39]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4d/9c/log.48318042._001434.job.log.tgz.1
[2026-01-27 08:59:39]  workdir=None
[2026-01-27 08:59:39] ]
[2026-01-27 08:59:39] 2026-01-27 07:59:01,323 | INFO     | transferring file log.48318042._001434.job.log.tgz.1 from /tmp/job_11053974/atlas/pilot/slots/0/PanDA_Pilot-6983306276/log.48318042._001434.job.log.tgz.1 to /tmp/j
[2026-01-27 08:59:39] 2026-01-27 07:59:01,323 | INFO     | executing command: /usr/bin/env mv /tmp/job_11053974/atlas/pilot/slots/0/PanDA_Pilot-6983306276/log.48318042._001434.job.log.tgz.1 /tmp/job_11053974/atlas/pilot/sl
[2026-01-27 08:59:39] 2026-01-27 07:59:01,330 | INFO     | adding to output.list: log.48318042._001434.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4d/9c/log.48318042._001434.job.log.tg
[2026-01-27 08:59:39] 2026-01-27 07:59:01,331 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-27 08:59:39] 2026-01-27 07:59:01,331 | INFO     | summary of transferred files:
[2026-01-27 08:59:39] 2026-01-27 07:59:01,331 | INFO     |  -- lfn=log.48318042._001434.job.log.tgz.1, status_code=0, status=transferred
[2026-01-27 08:59:39] 2026-01-27 07:59:01,331 | INFO     | stage-out finished correctly
[2026-01-27 08:59:39] 2026-01-27 07:59:01,623 | INFO     | time since job start (2988s) is within the limit (349056.0s)
[2026-01-27 08:59:39] 2026-01-27 07:59:01,733 | INFO     | monitor loop #226: job 0:6983306276 is in state 'finished'
[2026-01-27 08:59:39] 2026-01-27 07:59:01,733 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-27 08:59:39] 2026-01-27 07:59:02,743 | INFO     | PID=6409 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-27 08:59:39] 2026-01-27 07:59:02,744 | INFO     | .. there are 2 such processes running
[2026-01-27 08:59:39] 2026-01-27 07:59:03,744 | INFO     | time since job start (2990s) is within the limit (349056.0s)
[2026-01-27 08:59:39] 2026-01-27 07:59:04,066 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-27 08:59:39] 2026-01-27 07:59:04,236 | INFO     | monitor loop #227: job 0:6983306276 is in state 'finished'
[2026-01-27 08:59:39] 2026-01-27 07:59:04,236 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-27 08:59:39] 2026-01-27 07:59:05,749 | INFO     | time since job start (2992s) is within the limit (349056.0s)
[2026-01-27 08:59:39] 2026-01-27 07:59:06,739 | INFO     | monitor loop #228: job 0:6983306276 is in state 'finished'
[2026-01-27 08:59:39] 2026-01-27 07:59:06,739 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-27 08:59:39] 2026-01-27 07:59:06,860 | INFO     | job 6983306276 has state=finished
[2026-01-27 08:59:39] 2026-01-27 07:59:06,860 | INFO     | preparing for final server update for job 6983306276 in state='finished'
[2026-01-27 08:59:39] 2026-01-27 07:59:06,861 | INFO     | reading metadata from: /tmp/job_11053974/atlas/pilot/slots/0/PanDA_Pilot-6983306276/jobReport.json
[2026-01-27 08:59:39] 2026-01-27 07:59:06,862 | INFO     | added worker_node to metadata from /tmp/job_11053974/atlas/pilot/slots/0/workernode_map.json
[2026-01-27 08:59:39] 2026-01-27 07:59:06,862 | INFO     | this job has now completed (state=finished)
[2026-01-27 08:59:39] 2026-01-27 07:59:06,862 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-27 08:59:39] 2026-01-27 07:59:06,862 | INFO     | log transfer has been attempted: DONE
[2026-01-27 08:59:39] 2026-01-27 07:59:06,862 | INFO     | job 6983306276 has finished - writing final server update
[2026-01-27 08:59:39] 2026-01-27 07:59:06,862 | INFO     | total number of processed events: 400 (read)
[2026-01-27 08:59:39] 2026-01-27 07:59:06,880 | INFO     | using path: /tmp/job_11053974/atlas/pilot/slots/0/PanDA_Pilot-6983306276/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 08:59:39] 2026-01-27 07:59:06,880 | INFO     | extracted standard info from prmon json
[2026-01-27 08:59:39] 2026-01-27 07:59:06,880 | INFO     | extracted standard memory fields from prmon json
[2026-01-27 08:59:39] 2026-01-27 07:59:06,880 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-27 08:59:39] 2026-01-27 07:59:06,880 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-27 08:59:39] 2026-01-27 07:59:06,880 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-27 08:59:39] 2026-01-27 07:59:06,881 | INFO     | fitting pss+swap vs Time
[2026-01-27 08:59:39] 2026-01-27 07:59:06,881 | INFO     | sum of square deviations: 22960430.5
[2026-01-27 08:59:39] 2026-01-27 07:59:06,881 | INFO     | sum of deviations: 586972713.5
[2026-01-27 08:59:39] 2026-01-27 07:59:06,881 | INFO     | mean x: 1769499324.5
[2026-01-27 08:59:39] 2026-01-27 07:59:06,881 | INFO     | mean y: 2518683.119047619
[2026-01-27 08:59:39] 2026-01-27 07:59:06,881 | INFO     | intersect: -45233907525.79642
[2026-01-27 08:59:39] 2026-01-27 07:59:06,881 | INFO     | chi2: 0.0003644469454264399
[2026-01-27 08:59:39] 2026-01-27 07:59:06,882 | INFO     | current memory leak: 25.56 B/s (using 42 data points, chi2=0.00)
[2026-01-27 08:59:39] 2026-01-27 07:59:06,882 | INFO     | could have reported an average CPU frequency of 2988 MHz (5 samples)
[2026-01-27 08:59:39] 2026-01-27 07:59:06,882 | INFO     | ..............................
[2026-01-27 08:59:39] 2026-01-27 07:59:06,882 | INFO     | . Timing measurements:
[2026-01-27 08:59:39] 2026-01-27 07:59:06,882 | INFO     | . get job = 0 s
[2026-01-27 08:59:39] 2026-01-27 07:59:06,882 | INFO     | . initial setup = 2 s
[2026-01-27 08:59:39] 2026-01-27 07:59:06,882 | INFO     | . payload setup = 2 s
[2026-01-27 08:59:39] 2026-01-27 07:59:06,882 | INFO     | . stage-in = 0 s
[2026-01-27 08:59:39] 2026-01-27 07:59:06,882 | INFO     | . payload execution = 2969 s
[2026-01-27 08:59:39] 2026-01-27 07:59:06,882 | INFO     | . stage-out = 0 s
[2026-01-27 08:59:39] 2026-01-27 07:59:06,882 | INFO     | . log creation = 0 s
[2026-01-27 08:59:39] 2026-01-27 07:59:06,882 | INFO     | ..............................
[2026-01-27 08:59:39] 2026-01-27 07:59:07,160 | INFO     | 
[2026-01-27 08:59:39] 2026-01-27 07:59:07,160 | INFO     | job summary report
[2026-01-27 08:59:39] 2026-01-27 07:59:07,160 | INFO     | --------------------------------------------------
[2026-01-27 08:59:39] 2026-01-27 07:59:07,160 | INFO     | PanDA job id: 6983306276
[2026-01-27 08:59:39] 2026-01-27 07:59:07,160 | INFO     | task id: 48318042
[2026-01-27 08:59:39] 2026-01-27 07:59:07,160 | INFO     | errors: (none)
[2026-01-27 08:59:39] 2026-01-27 07:59:07,160 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-27 08:59:39] 2026-01-27 07:59:07,160 | INFO     | pilot state: finished 
[2026-01-27 08:59:39] 2026-01-27 07:59:07,160 | INFO     | transexitcode: 0
[2026-01-27 08:59:39] 2026-01-27 07:59:07,160 | INFO     | exeerrorcode: 0
[2026-01-27 08:59:39] 2026-01-27 07:59:07,160 | INFO     | exeerrordiag: 
[2026-01-27 08:59:39] 2026-01-27 07:59:07,160 | INFO     | exitcode: 0
[2026-01-27 08:59:39] 2026-01-27 07:59:07,160 | INFO     | exitmsg: OK
[2026-01-27 08:59:39] 2026-01-27 07:59:07,160 | INFO     | cpuconsumptiontime: 21722 s
[2026-01-27 08:59:39] 2026-01-27 07:59:07,160 | INFO     | nevents: 400
[2026-01-27 08:59:39] 2026-01-27 07:59:07,160 | INFO     | neventsw: 0
[2026-01-27 08:59:39] 2026-01-27 07:59:07,160 | INFO     | pid: 11243
[2026-01-27 08:59:39] 2026-01-27 07:59:07,160 | INFO     | pgrp: 11243
[2026-01-27 08:59:39] 2026-01-27 07:59:07,160 | INFO     | corecount: 8
[2026-01-27 08:59:39] 2026-01-27 07:59:07,160 | INFO     | event service: False
[2026-01-27 08:59:39] 2026-01-27 07:59:07,160 | INFO     | sizes: {0: 2284115, 1: 2284377, 11: 2284405, 2975: 2309908, 2977: 2318936, 2980: 2318992, 2982: 2319346}
[2026-01-27 08:59:39] 2026-01-27 07:59:07,160 | INFO     | --------------------------------------------------
[2026-01-27 08:59:39] 2026-01-27 07:59:07,160 | INFO     | 
[2026-01-27 08:59:39] 2026-01-27 07:59:07,160 | INFO     | executing command: ls -lF /tmp/job_11053974/atlas/pilot/slots/0
[2026-01-27 08:59:39] 2026-01-27 07:59:07,169 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-27 08:59:39] 2026-01-27 07:59:07,170 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-27 08:59:39] 2026-01-27 07:59:07,170 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-27 08:59:39] 2026-01-27 07:59:07,170 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-27 08:59:39] 2026-01-27 07:59:07,170 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-27 08:59:39] 2026-01-27 07:59:07,170 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-27 08:59:39] 2026-01-27 07:59:07,170 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-27 08:59:39] 2026-01-27 07:59:07,170 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-27 08:59:39] 2026-01-27 07:59:07,170 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-27 08:59:39] 2026-01-27 07:59:07,170 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-27 08:59:39] 2026-01-27 07:59:07,170 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-27 08:59:39] 2026-01-27 07:59:07,170 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-27 08:59:39] 2026-01-27 07:59:07,170 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-27 08:59:39] 2026-01-27 07:59:07,170 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-27 08:59:39] 2026-01-27 07:59:07,170 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-27 08:59:39] 2026-01-27 07:59:07,170 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-27 08:59:39] 2026-01-27 07:59:07,170 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-27 08:59:39] 2026-01-27 07:59:07,170 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-27 08:59:39] 2026-01-27 07:59:07,170 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-27 08:59:39] 2026-01-27 07:59:07,170 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-27 08:59:39] 2026-01-27 07:59:07,170 | INFO     | job 6983306276 has completed (purged errors)
[2026-01-27 08:59:39] 2026-01-27 07:59:07,170 | INFO     | overall cleanup function is called
[2026-01-27 08:59:39] 2026-01-27 07:59:08,176 | INFO     | --- collectZombieJob: --- 10, [11243]
[2026-01-27 08:59:39] 2026-01-27 07:59:08,176 | INFO     | zombie collector waiting for pid 11243
[2026-01-27 08:59:39] 2026-01-27 07:59:08,176 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 08:59:39] 2026-01-27 07:59:08,177 | INFO     | collected zombie processes
[2026-01-27 08:59:39] 2026-01-27 07:59:08,177 | INFO     | will attempt to kill all subprocesses of pid=11243
[2026-01-27 08:59:39] 2026-01-27 07:59:08,266 | INFO     | process IDs to be killed: [11243] (in reverse order)
[2026-01-27 08:59:39] 2026-01-27 07:59:08,297 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 08:59:39] 2026-01-27 07:59:08,298 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 08:59:39] 2026-01-27 07:59:08,301 | INFO     | did not find any defunct processes belonging to 11243
[2026-01-27 08:59:39] 2026-01-27 07:59:08,304 | INFO     | did not find any defunct processes belonging to 11243
[2026-01-27 08:59:39] 2026-01-27 07:59:08,304 | INFO     | ready for new job
[2026-01-27 08:59:39] 2026-01-27 07:59:08,304 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 08:59:39] 2026-01-27 07:59:08,304 | INFO     | **************************************
[2026-01-27 08:59:39] 2026-01-27 07:59:08,304 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 08:59:39] 2026-01-27 07:59:08,304 | INFO     | **************************************
[2026-01-27 08:59:39] 2026-01-27 07:59:08,304 | INFO     | 
[2026-01-27 08:59:39] 2026-01-27 07:59:08,319 | INFO     | architecture information:
[2026-01-27 08:59:39] 2026-01-27 07:59:08,319 | INFO     | executing command: cat /etc/os-release
[2026-01-27 08:59:39] 2026-01-27 07:59:08,325 | INFO     | cat /etc/os-release:
[2026-01-27 08:59:39] NAME="CentOS Linux"
[2026-01-27 08:59:39] VERSION="7 (Core)"
[2026-01-27 08:59:39] ID="centos"
[2026-01-27 08:59:39] ID_LIKE="rhel fedora"
[2026-01-27 08:59:39] VERSION_ID="7"
[2026-01-27 08:59:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 08:59:39] ANSI_COLOR="0;31"
[2026-01-27 08:59:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 08:59:39] HOME_URL="https://www.centos.org/"
[2026-01-27 08:59:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 08:59:39] 
[2026-01-27 08:59:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 08:59:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 08:59:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 08:59:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 08:59:39] 
[2026-01-27 08:59:39] 2026-01-27 07:59:08,325 | INFO     | **************************************
[2026-01-27 08:59:39] 2026-01-27 07:59:08,827 | INFO     | executing command: df -mP /tmp/job_11053974/atlas/pilot/slots/0
[2026-01-27 08:59:39] 2026-01-27 07:59:08,833 | INFO     | sufficient remaining disk space (226640265216 B)
[2026-01-27 08:59:39] 2026-01-27 07:59:08,833 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 08:59:39] 2026-01-27 07:59:08,834 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 08:59:39] 2026-01-27 07:59:08,834 | INFO     | update_server=False
[2026-01-27 08:59:39] 2026-01-27 07:59:08,834 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 08:59:39] 2026-01-27 07:59:08,834 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 08:59:39] 2026-01-27 07:59:09,127 | INFO     | all data control threads have been joined
[2026-01-27 08:59:39] 2026-01-27 07:59:09,242 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-27 08:59:39] 2026-01-27 07:59:09,242 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-27 08:59:39] 2026-01-27 07:59:09,242 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 08:59:39] 2026-01-27 07:59:09,242 | INFO     | will abort loop
[2026-01-27 08:59:39] 2026-01-27 07:59:09,344 | INFO     | all payload control threads have been joined
[2026-01-27 08:59:39] 2026-01-27 07:59:09,400 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 08:59:39] 2026-01-27 07:59:09,403 | INFO     | all job control threads have been joined
[2026-01-27 08:59:39] 2026-01-27 07:59:09,839 | INFO     | [job] retrieve thread has finished
[2026-01-27 08:59:39] 2026-01-27 07:59:09,839 | INFO     | [job] queue monitor thread has finished
[2026-01-27 08:59:39] 2026-01-27 07:59:09,928 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 08:59:39] 2026-01-27 07:59:09,929 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 08:59:39] 2026-01-27 07:59:09,976 | INFO     | [data] copytool_in thread has finished
[2026-01-27 08:59:39] 2026-01-27 07:59:10,116 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 08:59:39] 2026-01-27 07:59:10,132 | INFO     | [data] control thread has finished
[2026-01-27 08:59:39] 2026-01-27 07:59:10,247 | INFO     | [job] job monitor thread has finished
[2026-01-27 08:59:39] 2026-01-27 07:59:10,349 | INFO     | [payload] control thread has finished
[2026-01-27 08:59:39] 2026-01-27 07:59:10,408 | INFO     | [job] control thread has finished
[2026-01-27 08:59:39] 2026-01-27 07:59:10,562 | INFO     | [payload] validate_post thread has finished
[2026-01-27 08:59:39] 2026-01-27 07:59:11,228 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 08:59:39] 2026-01-27 07:59:11,269 | INFO     | [payload] failed_post thread has finished
[2026-01-27 08:59:39] 2026-01-27 07:59:11,298 | INFO     | [job] validate thread has finished
[2026-01-27 08:59:39] 2026-01-27 07:59:11,405 | INFO     | [data] copytool_out thread has finished
[2026-01-27 08:59:39] 2026-01-27 07:59:14,122 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 08:59:39] 2026-01-27 07:59:18,038 | INFO     | [monitor] cgroup control has ended
[2026-01-27 08:59:39] 2026-01-27 07:59:19,725 | INFO     | job.realtimelogging is not enabled
[2026-01-27 08:59:39] 2026-01-27 07:59:20,730 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 08:59:39] 2026-01-27 07:59:21,141 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456061081344)>']
[2026-01-27 08:59:39] 2026-01-27 07:59:26,148 | INFO     | all workflow threads have been joined
[2026-01-27 08:59:39] 2026-01-27 07:59:26,148 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 08:59:39] 2026-01-27 07:59:26,148 | INFO     | traces error code: 0
[2026-01-27 08:59:39] 2026-01-27 07:59:26,148 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 08:59:39] 2026-01-27 07:59:38,926 | INFO     | PID=6409 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-27 08:59:39] 2026-01-27 07:59:38,926 | INFO     | .. there are 2 such processes running
[2026-01-27 08:59:39] 2026-01-27 07:59:38,926 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 08:59:39] 2026-01-27 07:59:38,926 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 08:59:39] 2026-01-27 07:59:38,926 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 08:59:39] 2026-01-27 07:59:38,926 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 08:59:39] 2026-01-27 07:59:38,926 | INFO     | [monitor] control thread has ended
[2026-01-27 08:59:39] 2026-01-27 07:59:38,975 [wrapper] ==== pilot stdout END ====
[2026-01-27 08:59:39] 2026-01-27 07:59:38,977 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 08:59:39] 2026-01-27 07:59:38,978 [wrapper] pilotpid: 6409
[2026-01-27 08:59:39] 2026-01-27 07:59:38,979 [wrapper] Pilot exit status: 0
[2026-01-27 08:59:39] 2026-01-27 07:59:38,983 [wrapper] pandaids: 6983306276
[2026-01-27 08:59:39] 2026-01-27 07:59:39,004 [wrapper] cleanup supervisor_pilot 29760 6410
[2026-01-27 08:59:39] 2026-01-27 07:59:39,005 [wrapper] Test setup, not cleaning
[2026-01-27 08:59:39] 2026-01-27 07:59:39,006 [wrapper] apfmon messages muted
[2026-01-27 08:59:39] 2026-01-27 07:59:39,007 [wrapper] ==== wrapper stdout END ====
[2026-01-27 08:59:39] 2026-01-27 07:59:39,008 [wrapper] ==== wrapper stderr END ====
[2026-01-27 08:59:39]  *** Error codes and diagnostics ***
[2026-01-27 08:59:39]     "exeErrorCode": 0,
[2026-01-27 08:59:39]     "exeErrorDiag": "",
[2026-01-27 08:59:39]     "pilotErrorCode": 0,
[2026-01-27 08:59:39]     "pilotErrorDiag": "",
[2026-01-27 08:59:39]  *** Listing of results directory ***
[2026-01-27 08:59:39] total 672028
[2026-01-27 08:59:39] -rw------- 1 mf493845 unix-user    584422 Jan 25 19:47 pilot3.tar.gz
[2026-01-27 08:59:39] -rwx------ 1 mf493845 unix-user     36322 Jan 25 19:49 runpilot2-wrapper.sh
[2026-01-27 08:59:39] -rw------- 1 mf493845 unix-user      5111 Jan 25 19:52 queuedata.json
[2026-01-27 08:59:39] -rw------- 1 mf493845 unix-user       100 Jan 27 06:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 08:59:39] -rwxr-xr-x 1 mf493845 unix-user      7986 Jan 27 06:03 run_atlas
[2026-01-27 08:59:39] -rw------- 1 mf493845 unix-user       105 Jan 27 06:03 job.xml
[2026-01-27 08:59:39] -rw-r--r-- 2 mf493845 unix-user 494821636 Jan 27 08:09 EVNT.48318040._000029.pool.root.1
[2026-01-27 08:59:39] -rw-r--r-- 2 mf493845 unix-user     15845 Jan 27 08:09 start_atlas.sh
[2026-01-27 08:59:39] drwxrwx--x 2 mf493845 unix-user       100 Jan 27 08:09 shared
[2026-01-27 08:59:39] -rw-r--r-- 2 mf493845 unix-user    597769 Jan 27 08:09 input.tar.gz
[2026-01-27 08:59:39] -rw------- 1 mf493845 unix-user      6391 Jan 27 08:09 init_data.xml
[2026-01-27 08:59:39] -rw------- 1 mf493845 unix-user         0 Jan 27 08:09 boinc_setup_complete
[2026-01-27 08:59:39] -rw------- 1 mf493845 unix-user      8192 Jan 27 08:09 boinc_mmap_file
[2026-01-27 08:59:39] -rw------- 1 mf493845 unix-user         0 Jan 27 08:09 boinc_lockfile
[2026-01-27 08:59:39] -rw------- 1 mf493845 unix-user      2533 Jan 27 08:09 pandaJob.out
[2026-01-27 08:59:39] -rw------- 1 mf493845 unix-user   1004335 Jan 27 08:09 agis_schedconf.cvmfs.json
[2026-01-27 08:59:39] -rw------- 1 mf493845 unix-user   1516246 Jan 27 08:09 agis_ddmendpoints.agis.ALL.json
[2026-01-27 08:59:39] -rw------- 1 mf493845 unix-user       420 Jan 27 08:09 workernode_map.json
[2026-01-27 08:59:39] drwx------ 5 mf493845 unix-user       440 Jan 27 08:09 pilot3
[2026-01-27 08:59:39] -rw------- 1 mf493845 unix-user 187839163 Jan 27 08:58 HITS.48318042._001434.pool.root.1
[2026-01-27 08:59:39] -rw------- 1 mf493845 unix-user        95 Jan 27 08:58 pilot_heartbeat.json
[2026-01-27 08:59:39] -rw------- 1 mf493845 unix-user      1023 Jan 27 08:58 memory_monitor_summary.json
[2026-01-27 08:59:39] -rw------- 1 mf493845 unix-user    317391 Jan 27 08:59 log.48318042._001434.job.log.tgz.1
[2026-01-27 08:59:39] -rw------- 1 mf493845 unix-user      6317 Jan 27 08:59 heartbeat.json
[2026-01-27 08:59:39] -rw------- 1 mf493845 unix-user       819 Jan 27 08:59 pilotlog.txt
[2026-01-27 08:59:39] -rw------- 1 mf493845 unix-user    474260 Jan 27 08:59 log.48318042._001434.job.log.1
[2026-01-27 08:59:39] -rw------- 1 mf493845 unix-user       357 Jan 27 08:59 output.list
[2026-01-27 08:59:39] -rw------- 1 mf493845 unix-user       620 Jan 27 08:59 runtime_log
[2026-01-27 08:59:39] -rw------- 1 mf493845 unix-user    808960 Jan 27 08:59 result.tar.gz
[2026-01-27 08:59:39] -rw------- 1 mf493845 unix-user       643 Jan 27 08:59 YHQNDmQMK48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmOB8KDmBO6Bxm.diag
[2026-01-27 08:59:39] -rw------- 1 mf493845 unix-user      9219 Jan 27 08:59 runtime_log.err
[2026-01-27 08:59:39] -rw------- 1 mf493845 unix-user     22424 Jan 27 08:59 stderr.txt
[2026-01-27 08:59:39] HITS file was successfully produced:
[2026-01-27 08:59:39] -rw------- 1 mf493845 unix-user 187839163 Jan 27 08:58 shared/HITS.pool.root.1
[2026-01-27 08:59:39]  *** Contents of shared directory: ***
[2026-01-27 08:59:39] total 668060
[2026-01-27 08:59:39] -rw-r--r-- 2 mf493845 unix-user 494821636 Jan 27 08:09 ATLAS.root_0
[2026-01-27 08:59:39] -rw-r--r-- 2 mf493845 unix-user     15845 Jan 27 08:09 start_atlas.sh
[2026-01-27 08:59:39] -rw-r--r-- 2 mf493845 unix-user    597769 Jan 27 08:09 input.tar.gz
[2026-01-27 08:59:39] -rw------- 1 mf493845 unix-user 187839163 Jan 27 08:58 HITS.pool.root.1
[2026-01-27 08:59:39] -rw------- 1 mf493845 unix-user    808960 Jan 27 08:59 result.tar.gz
08:59:40 (2599): run_atlas exited; CPU time 21763.990220
08:59:40 (2599): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN