Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:07:03 (615718): wrapper (7.7.26015): starting
22:07:03 (615718): wrapper: running run_atlas (--nthreads 8)
[2026-01-26 22:07:03] Arguments: --nthreads 8
[2026-01-26 22:07:03] Threads: 8
[2026-01-26 22:07:03] Checking for CVMFS
[2026-01-26 22:07:04] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 22:07:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 22:07:04] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 22:07:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 22:07:25] 2.13.3.0 7038 48236 131344 155569 0 528 22051366 40960000 20439 16776704 0 87500176 99.744 59142391 42021 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-26 22:07:25] CVMFS is ok
[2026-01-26 22:07:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 22:07:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 22:07:25] Further information can be found at the LHC@home message board.
[2026-01-26 22:07:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 22:07:25] Checking for apptainer binary...
[2026-01-26 22:07:25] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 22:07:25] Running /usr/bin/apptainer --version
[2026-01-26 22:07:25] apptainer version 1.4.5-2.el9
[2026-01-26 22:07:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 22:07:26] c-212-4.aglt2.org
[2026-01-26 22:07:26] apptainer works
[2026-01-26 22:07:26] Set ATHENA_PROC_NUMBER=8
[2026-01-26 22:07:26] Set ATHENA_CORE_NUMBER=8
[2026-01-26 22:07:26] Starting ATLAS job with PandaID=6983772722
[2026-01-26 22:07:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 23:55:54]  *** The last 200 lines of the pilot log: ***
[2026-01-26 23:55:54]  lfn=log.48318042._001846.job.log.tgz.1
[2026-01-26 23:55:54]  mtime=0
[2026-01-26 23:55:54]  protocol_id=None
[2026-01-26 23:55:54]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-26 23:55:54]  replicas=None
[2026-01-26 23:55:54]  scope=mc23_13p6TeV
[2026-01-26 23:55:54]  status=None
[2026-01-26 23:55:54]  status_code=0
[2026-01-26 23:55:54]  storage_token=
[2026-01-26 23:55:54]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6983772722/log.48318042._001846.job.log.tgz.1
[2026-01-26 23:55:54]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/82/73/log.48318042._001846.job.log.tgz.1
[2026-01-26 23:55:54]  workdir=None
[2026-01-26 23:55:54] ]
[2026-01-26 23:55:54] 2026-01-27 04:43:38,369 | INFO     | transferring file log.48318042._001846.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6983772722/log.48318042._001846.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-26 23:55:54] 2026-01-27 04:43:38,377 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6983772722/log.48318042._001846.job.log.tgz.1 /tmp/boinchome/slots/0/log.48318042._001846.job
[2026-01-26 23:55:54] 2026-01-27 04:43:38,432 | INFO     | adding to output.list: log.48318042._001846.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/82/73/log.48318042._001846.job.log.tg
[2026-01-26 23:55:54] 2026-01-27 04:43:38,433 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-26 23:55:54] 2026-01-27 04:43:38,433 | INFO     | summary of transferred files:
[2026-01-26 23:55:54] 2026-01-27 04:43:38,433 | INFO     |  -- lfn=log.48318042._001846.job.log.tgz.1, status_code=0, status=transferred
[2026-01-26 23:55:54] 2026-01-27 04:43:38,434 | INFO     | stage-out finished correctly
[2026-01-26 23:55:54] 2026-01-27 04:43:38,657 | INFO     | PID=621090 has CPU usage=7.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-26 23:55:54] 2026-01-27 04:43:38,658 | INFO     | .. there are 19 such processes running
[2026-01-26 23:55:54] 2026-01-27 04:43:39,658 | INFO     | time since job start (5689s) is within the limit (349056.0s)
[2026-01-26 23:55:54] 2026-01-27 04:43:39,744 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-26 23:55:54] 2026-01-27 04:43:40,232 | WARNING  | process 626239 can no longer be monitored (due to stat problems) - aborting
[2026-01-26 23:55:54] 2026-01-27 04:43:40,232 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6983772722/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 23:55:54] 2026-01-27 04:43:40,601 | INFO     | number of running child processes to parent process 626239: 1
[2026-01-26 23:55:54] 2026-01-27 04:43:40,601 | INFO     | maximum number of monitored processes: 6
[2026-01-26 23:55:54] 2026-01-27 04:43:41,663 | INFO     | time since job start (5691s) is within the limit (349056.0s)
[2026-01-26 23:55:54] 2026-01-27 04:43:41,802 | INFO     | job 6983772722 has state=finished
[2026-01-26 23:55:54] 2026-01-27 04:43:41,802 | INFO     | preparing for final server update for job 6983772722 in state='finished'
[2026-01-26 23:55:54] 2026-01-27 04:43:41,803 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-6983772722/jobReport.json
[2026-01-26 23:55:54] 2026-01-27 04:43:41,806 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-01-26 23:55:54] 2026-01-27 04:43:41,806 | INFO     | this job has now completed (state=finished)
[2026-01-26 23:55:54] 2026-01-27 04:43:41,806 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-26 23:55:54] 2026-01-27 04:43:41,806 | INFO     | log transfer has been attempted: DONE
[2026-01-26 23:55:54] 2026-01-27 04:43:41,806 | INFO     | job 6983772722 has finished - writing final server update
[2026-01-26 23:55:54] 2026-01-27 04:43:41,807 | INFO     | total number of processed events: 400 (read)
[2026-01-26 23:55:54] 2026-01-27 04:43:41,883 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6983772722/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 23:55:54] 2026-01-27 04:43:41,883 | INFO     | extracted standard info from prmon json
[2026-01-26 23:55:54] 2026-01-27 04:43:41,883 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 23:55:54] 2026-01-27 04:43:41,883 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 23:55:54] 2026-01-27 04:43:41,884 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 23:55:54] 2026-01-27 04:43:41,884 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 23:55:54] 2026-01-27 04:43:41,885 | INFO     | fitting pss+swap vs Time
[2026-01-26 23:55:54] 2026-01-27 04:43:41,886 | INFO     | sum of square deviations: 197209067.45348847
[2026-01-26 23:55:54] 2026-01-27 04:43:41,900 | INFO     | sum of deviations: 405093772.5
[2026-01-26 23:55:54] 2026-01-27 04:43:41,900 | INFO     | mean x: 1769486287.5232558
[2026-01-26 23:55:54] 2026-01-27 04:43:41,901 | INFO     | mean y: 2510583.5
[2026-01-26 23:55:54] 2026-01-27 04:43:41,901 | INFO     | intersect: -3632250661.790477
[2026-01-26 23:55:54] 2026-01-27 04:43:41,901 | INFO     | chi2: 0.029926116184142107
[2026-01-26 23:55:54] 2026-01-27 04:43:41,901 | INFO     | current memory leak: 2.05 B/s (using 86 data points, chi2=0.03)
[2026-01-26 23:55:54] 2026-01-27 04:43:41,901 | INFO     | could have reported an average CPU frequency of 3205 MHz (7 samples)
[2026-01-26 23:55:54] 2026-01-27 04:43:41,901 | INFO     | ..............................
[2026-01-26 23:55:54] 2026-01-27 04:43:41,902 | INFO     | . Timing measurements:
[2026-01-26 23:55:54] 2026-01-27 04:43:41,902 | INFO     | . get job = 0 s
[2026-01-26 23:55:54] 2026-01-27 04:43:41,902 | INFO     | . initial setup = 29 s
[2026-01-26 23:55:54] 2026-01-27 04:43:41,902 | INFO     | . payload setup = 30 s
[2026-01-26 23:55:54] 2026-01-27 04:43:41,902 | INFO     | . stage-in = 0 s
[2026-01-26 23:55:54] 2026-01-27 04:43:41,902 | INFO     | . payload execution = 5638 s
[2026-01-26 23:55:54] 2026-01-27 04:43:41,902 | INFO     | . stage-out = 2 s
[2026-01-26 23:55:54] 2026-01-27 04:43:41,902 | INFO     | . log creation = 0 s
[2026-01-26 23:55:54] 2026-01-27 04:43:41,902 | INFO     | ..............................
[2026-01-26 23:55:54] 2026-01-27 04:43:42,028 | INFO     | 
[2026-01-26 23:55:54] 2026-01-27 04:43:42,028 | INFO     | job summary report
[2026-01-26 23:55:54] 2026-01-27 04:43:42,028 | INFO     | --------------------------------------------------
[2026-01-26 23:55:54] 2026-01-27 04:43:42,028 | INFO     | PanDA job id: 6983772722
[2026-01-26 23:55:54] 2026-01-27 04:43:42,028 | INFO     | task id: 48318042
[2026-01-26 23:55:54] 2026-01-27 04:43:42,029 | INFO     | errors: (none)
[2026-01-26 23:55:54] 2026-01-27 04:43:42,029 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 23:55:54] 2026-01-27 04:43:42,029 | INFO     | pilot state: finished 
[2026-01-26 23:55:54] 2026-01-27 04:43:42,029 | INFO     | transexitcode: 0
[2026-01-26 23:55:54] 2026-01-27 04:43:42,029 | INFO     | exeerrorcode: 0
[2026-01-26 23:55:54] 2026-01-27 04:43:42,029 | INFO     | exeerrordiag: 
[2026-01-26 23:55:54] 2026-01-27 04:43:42,029 | INFO     | exitcode: 0
[2026-01-26 23:55:54] 2026-01-27 04:43:42,029 | INFO     | exitmsg: OK
[2026-01-26 23:55:54] 2026-01-27 04:43:42,029 | INFO     | cpuconsumptiontime: 33673 s
[2026-01-26 23:55:54] 2026-01-27 04:43:42,029 | INFO     | nevents: 400
[2026-01-26 23:55:54] 2026-01-27 04:43:42,029 | INFO     | neventsw: 0
[2026-01-26 23:55:54] 2026-01-27 04:43:42,029 | INFO     | pid: 626239
[2026-01-26 23:55:54] 2026-01-27 04:43:42,029 | INFO     | pgrp: 626239
[2026-01-26 23:55:54] 2026-01-27 04:43:42,029 | INFO     | corecount: 8
[2026-01-26 23:55:54] 2026-01-27 04:43:42,029 | INFO     | event service: False
[2026-01-26 23:55:54] 2026-01-27 04:43:42,029 | INFO     | sizes: {0: 2283161, 1: 2284279, 12: 2284279, 5673: 2310811, 5676: 2319809, 5677: 2319865, 5679: 2320187}
[2026-01-26 23:55:54] 2026-01-27 04:43:42,030 | INFO     | --------------------------------------------------
[2026-01-26 23:55:54] 2026-01-27 04:43:42,030 | INFO     | 
[2026-01-26 23:55:54] 2026-01-27 04:43:42,030 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-26 23:55:54] 2026-01-27 04:43:42,108 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 23:55:54] 2026-01-27 04:43:42,108 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 23:55:54] 2026-01-27 04:43:42,108 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 23:55:54] 2026-01-27 04:43:42,108 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 23:55:54] 2026-01-27 04:43:42,108 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 23:55:54] 2026-01-27 04:43:42,108 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 23:55:54] 2026-01-27 04:43:42,108 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 23:55:54] 2026-01-27 04:43:42,108 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 23:55:54] 2026-01-27 04:43:42,108 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 23:55:54] 2026-01-27 04:43:42,108 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 23:55:54] 2026-01-27 04:43:42,108 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 23:55:54] 2026-01-27 04:43:42,109 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 23:55:54] 2026-01-27 04:43:42,109 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 23:55:54] 2026-01-27 04:43:42,109 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 23:55:54] 2026-01-27 04:43:42,109 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 23:55:54] 2026-01-27 04:43:42,109 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 23:55:54] 2026-01-27 04:43:42,109 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 23:55:54] 2026-01-27 04:43:42,109 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 23:55:54] 2026-01-27 04:43:42,109 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 23:55:54] 2026-01-27 04:43:42,109 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 23:55:54] 2026-01-27 04:43:42,109 | INFO     | job 6983772722 has completed (purged errors)
[2026-01-26 23:55:54] 2026-01-27 04:43:42,109 | INFO     | overall cleanup function is called
[2026-01-26 23:55:54] 2026-01-27 04:43:43,163 | INFO     | --- collectZombieJob: --- 10, [626239]
[2026-01-26 23:55:54] 2026-01-27 04:43:43,163 | INFO     | zombie collector waiting for pid 626239
[2026-01-26 23:55:54] 2026-01-27 04:43:43,163 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 23:55:54] 2026-01-27 04:43:43,163 | INFO     | collected zombie processes
[2026-01-26 23:55:54] 2026-01-27 04:43:43,164 | INFO     | will attempt to kill all subprocesses of pid=626239
[2026-01-26 23:55:54] 2026-01-27 04:43:43,822 | INFO     | process IDs to be killed: [626239] (in reverse order)
[2026-01-26 23:55:54] 2026-01-27 04:43:44,368 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 23:55:54] 2026-01-27 04:43:44,369 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 23:55:54] 2026-01-27 04:43:44,383 | INFO     | did not find any defunct processes belonging to 626239
[2026-01-26 23:55:54] 2026-01-27 04:43:44,396 | INFO     | did not find any defunct processes belonging to 626239
[2026-01-26 23:55:54] 2026-01-27 04:43:44,397 | INFO     | ready for new job
[2026-01-26 23:55:54] 2026-01-27 04:43:44,397 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 23:55:54] 2026-01-27 04:43:44,400 | INFO     | **************************************
[2026-01-26 23:55:54] 2026-01-27 04:43:44,400 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 23:55:54] 2026-01-27 04:43:44,400 | INFO     | **************************************
[2026-01-26 23:55:54] 2026-01-27 04:43:44,400 | INFO     | 
[2026-01-26 23:55:54] 2026-01-27 04:43:44,431 | INFO     | architecture information:
[2026-01-26 23:55:54] 2026-01-27 04:43:44,453 | INFO     | executing command: cat /etc/os-release
[2026-01-26 23:55:54] 2026-01-27 04:43:44,546 | INFO     | cat /etc/os-release:
[2026-01-26 23:55:54] NAME="CentOS Linux"
[2026-01-26 23:55:54] VERSION="7 (Core)"
[2026-01-26 23:55:54] ID="centos"
[2026-01-26 23:55:54] ID_LIKE="rhel fedora"
[2026-01-26 23:55:54] VERSION_ID="7"
[2026-01-26 23:55:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 23:55:54] ANSI_COLOR="0;31"
[2026-01-26 23:55:54] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 23:55:54] HOME_URL="https://www.centos.org/"
[2026-01-26 23:55:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 23:55:54] 
[2026-01-26 23:55:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 23:55:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 23:55:54] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 23:55:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 23:55:54] 
[2026-01-26 23:55:54] 2026-01-27 04:43:44,547 | INFO     | **************************************
[2026-01-26 23:55:54] 2026-01-27 04:43:45,050 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-26 23:55:54] 2026-01-27 04:43:45,142 | INFO     | sufficient remaining disk space (120950095872 B)
[2026-01-26 23:55:54] 2026-01-27 04:43:45,143 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 23:55:54] 2026-01-27 04:43:45,143 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 23:55:54] 2026-01-27 04:43:45,143 | INFO     | update_server=False
[2026-01-26 23:55:54] 2026-01-27 04:43:45,143 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 23:55:54] 2026-01-27 04:43:45,144 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 23:55:54] 2026-01-27 04:43:45,256 | INFO     | all job control threads have been joined
[2026-01-26 23:55:54] 2026-01-27 04:43:45,621 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-26 23:55:54] 2026-01-27 04:43:45,621 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-26 23:55:54] 2026-01-27 04:43:45,621 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 23:55:54] 2026-01-27 04:43:45,621 | INFO     | will abort loop
[2026-01-26 23:55:54] 2026-01-27 04:43:45,971 | INFO     | all payload control threads have been joined
[2026-01-26 23:55:54] 2026-01-27 04:43:46,008 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 23:55:54] 2026-01-27 04:43:46,136 | INFO     | all data control threads have been joined
[2026-01-26 23:55:54] 2026-01-27 04:43:46,149 | INFO     | [job] retrieve thread has finished
[2026-01-26 23:55:54] 2026-01-27 04:43:46,244 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 23:55:54] 2026-01-27 04:43:46,261 | INFO     | [job] control thread has finished
[2026-01-26 23:55:54] 2026-01-27 04:43:46,326 | INFO     | [payload] validate_post thread has finished
[2026-01-26 23:55:54] 2026-01-27 04:43:46,367 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 23:55:54] 2026-01-27 04:43:46,627 | INFO     | [job] job monitor thread has finished
[2026-01-26 23:55:54] 2026-01-27 04:43:46,977 | INFO     | [payload] control thread has finished
[2026-01-26 23:55:54] 2026-01-27 04:43:47,020 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 23:55:54] 2026-01-27 04:43:47,024 | INFO     | [data] copytool_in thread has finished
[2026-01-26 23:55:54] 2026-01-27 04:43:47,046 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 23:55:54] 2026-01-27 04:43:47,049 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 23:55:54] 2026-01-27 04:43:47,142 | INFO     | [data] control thread has finished
[2026-01-26 23:55:54] 2026-01-27 04:43:47,151 | INFO     | [data] copytool_out thread has finished
[2026-01-26 23:55:54] 2026-01-27 04:43:47,357 | INFO     | [job] validate thread has finished
[2026-01-26 23:55:54] 2026-01-27 04:43:47,698 | INFO     | [payload] failed_post thread has finished
[2026-01-26 23:55:54] 2026-01-27 04:43:48,052 | INFO     | [job] queue monitor thread has finished
[2026-01-26 23:55:54] 2026-01-27 04:43:50,012 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 23:55:54] 2026-01-27 04:43:58,837 | INFO     | [monitor] cgroup control has ended
[2026-01-26 23:55:54] 2026-01-27 04:43:59,961 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139824357783360)>', '<ExcThread(monitor, started 139824083519232)>']
[2026-01-26 23:55:54] 2026-01-27 04:44:04,990 | INFO     | all workflow threads have been joined
[2026-01-26 23:55:54] 2026-01-27 04:44:04,990 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 23:55:54] 2026-01-27 04:44:04,990 | INFO     | traces error code: 0
[2026-01-26 23:55:54] 2026-01-27 04:44:04,991 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 23:55:54] 2026-01-27 04:44:16,110 | INFO     | PID=621090 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-26 23:55:54] 2026-01-27 04:44:16,111 | INFO     | .. there are 19 such processes running
[2026-01-26 23:55:54] 2026-01-27 04:44:16,134 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 23:55:54] 2026-01-27 04:44:16,134 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 23:55:54] 2026-01-27 04:44:16,134 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 23:55:54] 2026-01-27 04:44:16,134 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 23:55:54] 2026-01-27 04:44:16,135 | INFO     | [monitor] control thread has ended
[2026-01-26 23:55:54] 2026-01-27 04:44:20,069 [wrapper] ==== pilot stdout END ====
[2026-01-26 23:55:54] 2026-01-27 04:44:20,072 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 23:55:54] 2026-01-27 04:44:20,075 [wrapper] pilotpid: 621090
[2026-01-26 23:55:54] 2026-01-27 04:44:20,079 [wrapper] Pilot exit status: 0
[2026-01-26 23:55:54] 2026-01-27 04:44:20,109 [wrapper] pandaids: 6983772722
[2026-01-26 23:55:54] 2026-01-27 04:44:20,222 [wrapper] cleanup supervisor_pilot  807858 621091
[2026-01-26 23:55:54] 2026-01-27 04:44:20,224 [wrapper] Test setup, not cleaning
[2026-01-26 23:55:54] 2026-01-27 04:44:20,226 [wrapper] apfmon messages muted
[2026-01-26 23:55:54] 2026-01-27 04:44:20,229 [wrapper] ==== wrapper stdout END ====
[2026-01-26 23:55:54] 2026-01-27 04:44:20,232 [wrapper] ==== wrapper stderr END ====
[2026-01-26 23:55:54]  *** Error codes and diagnostics ***
[2026-01-26 23:55:54]     "exeErrorCode": 0,
[2026-01-26 23:55:54]     "exeErrorDiag": "",
[2026-01-26 23:55:54]     "pilotErrorCode": 0,
[2026-01-26 23:55:54]     "pilotErrorDiag": "",
[2026-01-26 23:55:54]  *** Listing of results directory ***
[2026-01-26 23:55:54] total 674332
[2026-01-26 23:55:54] -rw-r--r--. 1 boincer umatlas    584422 Jan 25 22:19 pilot3.tar.gz
[2026-01-26 23:55:54] -rwx------. 1 boincer umatlas     36322 Jan 25 22:19 runpilot2-wrapper.sh
[2026-01-26 23:55:54] -rw-r--r--. 1 boincer umatlas      5111 Jan 25 22:21 queuedata.json
[2026-01-26 23:55:54] -rw-r--r--. 1 boincer umatlas       100 Jan 26 22:07 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 23:55:54] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 26 22:07 run_atlas
[2026-01-26 23:55:54] -rw-r--r--. 1 boincer umatlas       105 Jan 26 22:07 job.xml
[2026-01-26 23:55:54] -rw-r--r--. 2 boincer umatlas 501075542 Jan 26 22:07 EVNT.48318040._000037.pool.root.1
[2026-01-26 23:55:54] -rw-r--r--. 2 boincer umatlas     15845 Jan 26 22:07 start_atlas.sh
[2026-01-26 23:55:54] drwxrwx--x. 2 boincer umatlas      4096 Jan 26 22:07 shared
[2026-01-26 23:55:54] -rw-r--r--. 2 boincer umatlas    597769 Jan 26 22:07 input.tar.gz
[2026-01-26 23:55:54] -rw-r--r--. 1 boincer umatlas         0 Jan 26 22:07 boinc_lockfile
[2026-01-26 23:55:54] -rw-r--r--. 1 boincer umatlas      2533 Jan 26 22:07 pandaJob.out
[2026-01-26 23:55:54] -rw-------. 1 boincer umatlas        57 Jan 26 22:07 setup.sh.local
[2026-01-26 23:55:54] -rw-------. 1 boincer umatlas   1006425 Jan 26 22:08 agis_schedconf.cvmfs.json
[2026-01-26 23:55:54] -rw-------. 1 boincer umatlas   1516246 Jan 26 22:08 agis_ddmendpoints.agis.ALL.json
[2026-01-26 23:55:54] -rw-------. 1 boincer umatlas       428 Jan 26 22:08 workernode_map.json
[2026-01-26 23:55:54] drwx------. 5 boincer umatlas      4096 Jan 26 22:08 pilot3
[2026-01-26 23:55:54] -rw-------. 1 boincer umatlas 183245354 Jan 26 23:42 HITS.48318042._001846.pool.root.1
[2026-01-26 23:55:54] -rw-r--r--. 1 boincer umatlas       531 Jan 26 23:42 boinc_task_state.xml
[2026-01-26 23:55:54] -rw-------. 1 boincer umatlas      1028 Jan 26 23:43 memory_monitor_summary.json
[2026-01-26 23:55:54] -rw-------. 1 boincer umatlas    359466 Jan 26 23:43 log.48318042._001846.job.log.tgz.1
[2026-01-26 23:55:54] -rw-------. 1 boincer umatlas      6315 Jan 26 23:43 heartbeat.json
[2026-01-26 23:55:54] -rw-------. 1 boincer umatlas        95 Jan 26 23:44 pilot_heartbeat.json
[2026-01-26 23:55:54] -rw-------. 1 boincer umatlas       822 Jan 26 23:44 pilotlog.txt
[2026-01-26 23:55:54] -rw-------. 1 boincer umatlas    766927 Jan 26 23:44 log.48318042._001846.job.log.1
[2026-01-26 23:55:54] -rw-------. 1 boincer umatlas       357 Jan 26 23:44 output.list
[2026-01-26 23:55:54] -rw-r--r--. 1 boincer umatlas       620 Jan 26 23:44 runtime_log
[2026-01-26 23:55:54] -rw-------. 1 boincer umatlas   1146880 Jan 26 23:44 result.tar.gz
[2026-01-26 23:55:54] -rw-r--r--. 1 boincer umatlas      9336 Jan 26 23:44 runtime_log.err
[2026-01-26 23:55:54] -rw-------. 1 boincer umatlas       651 Jan 26 23:44 j6rMDm2JS48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmOS2KDmt3ifRo.diag
[2026-01-26 23:55:54] -rw-r--r--. 1 boincer umatlas      6958 Jan 26 23:48 init_data.xml
[2026-01-26 23:55:54] -rw-r--r--. 1 boincer umatlas      8192 Jan 26 23:55 boinc_mmap_file
[2026-01-26 23:55:54] -rw-r--r--. 1 boincer umatlas        27 Jan 26 23:55 wrapper_checkpoint.txt
[2026-01-26 23:55:54] -rw-r--r--. 1 boincer umatlas     21735 Jan 26 23:55 stderr.txt
[2026-01-26 23:55:54] HITS file was successfully produced:
[2026-01-26 23:55:54] -rw-------. 1 boincer umatlas 183245354 Jan 26 23:42 shared/HITS.pool.root.1
[2026-01-26 23:55:54]  *** Contents of shared directory: ***
[2026-01-26 23:55:54] total 670012
[2026-01-26 23:55:54] -rw-r--r--. 2 boincer umatlas 501075542 Jan 26 22:07 ATLAS.root_0
[2026-01-26 23:55:54] -rw-r--r--. 2 boincer umatlas     15845 Jan 26 22:07 start_atlas.sh
[2026-01-26 23:55:54] -rw-r--r--. 2 boincer umatlas    597769 Jan 26 22:07 input.tar.gz
[2026-01-26 23:55:54] -rw-------. 1 boincer umatlas 183245354 Jan 26 23:42 HITS.pool.root.1
[2026-01-26 23:55:54] -rw-------. 1 boincer umatlas   1146880 Jan 26 23:44 result.tar.gz
23:55:56 (615718): run_atlas exited; CPU time 33847.079028
23:55:56 (615718): called boinc_finish(0)

</stderr_txt>
]]>

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