Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:44:22 (3994392): wrapper (7.7.26015): starting
21:44:22 (3994392): wrapper: running run_atlas (--nthreads 10)
[2026-01-26 21:44:22] Arguments: --nthreads 10
[2026-01-26 21:44:22] Threads: 10
[2026-01-26 21:44:22] Checking for CVMFS
[2026-01-26 21:44:22] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 21:44:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 21:44:22] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 21:44:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 21:44:22] 2.13.3.0 8961 48251 253816 155569 0 507 32269613 40960001 8421 16776704 0 39275834 99.601 40943435 42889 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-26 21:44:22] CVMFS is ok
[2026-01-26 21:44:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 21:44:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 21:44:22] Further information can be found at the LHC@home message board.
[2026-01-26 21:44:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 21:44:22] Checking for apptainer binary...
[2026-01-26 21:44:22] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 21:44:22] Running /usr/bin/apptainer --version
[2026-01-26 21:44:22] apptainer version 1.4.5-2.el9
[2026-01-26 21:44:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 21:44:23] c-210-35-1.aglt2.org
[2026-01-26 21:44:23] apptainer works
[2026-01-26 21:44:23] Set ATHENA_PROC_NUMBER=10
[2026-01-26 21:44:23] Set ATHENA_CORE_NUMBER=10
[2026-01-26 21:44:23] Starting ATLAS job with PandaID=6976469885
[2026-01-26 21:44:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 07:42:05]  *** The last 200 lines of the pilot log: ***
[2026-01-27 07:42:05] 2026-01-27 12:41:25,658 | INFO     |  -- lfn=log.47961985._001633.job.log.tgz.1, status_code=0, status=transferred
[2026-01-27 07:42:05] 2026-01-27 12:41:25,658 | INFO     | stage-out finished correctly
[2026-01-27 07:42:05] 2026-01-27 12:41:26,027 | INFO     | time since job start (35810s) is within the limit (349056.0s)
[2026-01-27 07:42:05] 2026-01-27 12:41:27,484 | INFO     | monitor loop #2348: job 0:6976469885 is in state 'finished'
[2026-01-27 07:42:05] 2026-01-27 12:41:27,484 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-27 07:42:05] 2026-01-27 12:41:28,034 | INFO     | time since job start (35812s) is within the limit (349056.0s)
[2026-01-27 07:42:05] 2026-01-27 12:41:29,243 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-27 07:42:05] 2026-01-27 12:41:29,635 | INFO     | job 6976469885 has state=finished
[2026-01-27 07:42:05] 2026-01-27 12:41:29,636 | INFO     | preparing for final server update for job 6976469885 in state='finished'
[2026-01-27 07:42:05] 2026-01-27 12:41:29,746 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-01-27 07:42:05] 2026-01-27 12:41:29,746 | INFO     | reading metadata from: /tmp/boinchome/slots/1/PanDA_Pilot-6976469885/jobReport.json
[2026-01-27 07:42:05] 2026-01-27 12:41:29,791 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/1/workernode_map.json
[2026-01-27 07:42:05] 2026-01-27 12:41:29,791 | INFO     | this job has now completed (state=finished)
[2026-01-27 07:42:05] 2026-01-27 12:41:29,791 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-27 07:42:05] 2026-01-27 12:41:29,791 | INFO     | log transfer has been attempted: DONE
[2026-01-27 07:42:05] 2026-01-27 12:41:29,791 | INFO     | job 6976469885 has finished - writing final server update
[2026-01-27 07:42:05] 2026-01-27 12:41:29,792 | INFO     | total number of processed events: 350 (read)
[2026-01-27 07:42:05] 2026-01-27 12:41:29,868 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6976469885/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 07:42:05] 2026-01-27 12:41:29,885 | INFO     | extracted standard info from prmon json
[2026-01-27 07:42:05] 2026-01-27 12:41:29,885 | INFO     | extracted standard memory fields from prmon json
[2026-01-27 07:42:05] 2026-01-27 12:41:29,885 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-27 07:42:05] 2026-01-27 12:41:29,933 | INFO     | fitting pss+swap vs Time
[2026-01-27 07:42:05] 2026-01-27 12:41:29,934 | INFO     | sum of square deviations: 62711351766.780334
[2026-01-27 07:42:05] 2026-01-27 12:41:29,969 | INFO     | sum of deviations: 238454622187.5575
[2026-01-27 07:42:05] 2026-01-27 12:41:29,969 | INFO     | mean x: 1769499773.6303236
[2026-01-27 07:42:05] 2026-01-27 12:41:29,969 | INFO     | mean y: 3063052.541737649
[2026-01-27 07:42:05] 2026-01-27 12:41:29,970 | INFO     | intersect: -6725310489.00105
[2026-01-27 07:42:05] 2026-01-27 12:41:29,972 | INFO     | chi2: 12.562102258532335
[2026-01-27 07:42:05] 2026-01-27 12:41:29,973 | INFO     | sum of square deviations: 61123118296.159744
[2026-01-27 07:42:05] 2026-01-27 12:41:29,986 | INFO     | sum of deviations: 431218380833.8607
[2026-01-27 07:42:05] 2026-01-27 12:41:29,986 | INFO     | mean x: 1769499621.170103
[2026-01-27 07:42:05] 2026-01-27 12:41:29,986 | INFO     | mean y: 3081558.4862542953
[2026-01-27 07:42:05] 2026-01-27 12:41:29,986 | INFO     | intersect: -12480587187.436388
[2026-01-27 07:42:05] 2026-01-27 12:41:29,992 | INFO     | chi2: 9.666266814266756
[2026-01-27 07:42:05] 2026-01-27 12:41:29,992 | INFO     | current chi2=9.666266814266756 (change=23.052156276619158 %)
[2026-01-27 07:42:05] 2026-01-27 12:41:29,992 | INFO     | right removable region: 581
[2026-01-27 07:42:05] 2026-01-27 12:41:29,993 | INFO     | sum of square deviations: 61121531456.83344
[2026-01-27 07:42:05] 2026-01-27 12:41:30,002 | INFO     | monitor loop #2349: job 0:6976469885 is in state 'finished'
[2026-01-27 07:42:05] 2026-01-27 12:41:30,002 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-27 07:42:05] 2026-01-27 12:41:30,005 | INFO     | sum of deviations: 76105693419.66716
[2026-01-27 07:42:05] 2026-01-27 12:41:30,005 | INFO     | mean x: 1769499926.1666667
[2026-01-27 07:42:05] 2026-01-27 12:41:30,005 | INFO     | mean y: 3078593.261168385
[2026-01-27 07:42:05] 2026-01-27 12:41:30,005 | INFO     | intersect: -2200220566.2514305
[2026-01-27 07:42:05] 2026-01-27 12:41:30,006 | INFO     | chi2: 10.534942112639156
[2026-01-27 07:42:05] 2026-01-27 12:41:30,006 | INFO     | current chi2=10.534942112639156 (change=16.137109093474436 %)
[2026-01-27 07:42:05] 2026-01-27 12:41:30,006 | INFO     | left removable region: 10
[2026-01-27 07:42:05] 2026-01-27 12:41:30,007 | INFO     | sum of square deviations: 57721140601.06842
[2026-01-27 07:42:05] 2026-01-27 12:41:30,019 | INFO     | sum of deviations: 275238880892.809
[2026-01-27 07:42:05] 2026-01-27 12:41:30,025 | INFO     | mean x: 1769499895.7355516
[2026-01-27 07:42:05] 2026-01-27 12:41:30,025 | INFO     | mean y: 3105503.098073555
[2026-01-27 07:42:05] 2026-01-27 12:41:30,025 | INFO     | intersect: -8434620535.759523
[2026-01-27 07:42:05] 2026-01-27 12:41:30,026 | INFO     | chi2: 6.839923920357745
[2026-01-27 07:42:05] 2026-01-27 12:41:30,026 | INFO     | current memory leak: 4.77 B/s (using 571 data points, chi2=6.84)
[2026-01-27 07:42:05] 2026-01-27 12:41:30,027 | INFO     | could have reported an average CPU frequency of 3090 MHz (23 samples)
[2026-01-27 07:42:05] 2026-01-27 12:41:30,027 | INFO     | ..............................
[2026-01-27 07:42:05] 2026-01-27 12:41:30,027 | INFO     | . Timing measurements:
[2026-01-27 07:42:05] 2026-01-27 12:41:30,027 | INFO     | . get job = 0 s
[2026-01-27 07:42:05] 2026-01-27 12:41:30,027 | INFO     | . initial setup = 5 s
[2026-01-27 07:42:05] 2026-01-27 12:41:30,027 | INFO     | . payload setup = 4 s
[2026-01-27 07:42:05] 2026-01-27 12:41:30,028 | INFO     | . stage-in = 0 s
[2026-01-27 07:42:05] 2026-01-27 12:41:30,028 | INFO     | . payload execution = 35784 s
[2026-01-27 07:42:05] 2026-01-27 12:41:30,028 | INFO     | . stage-out = 4 s
[2026-01-27 07:42:05] 2026-01-27 12:41:30,028 | INFO     | . log creation = 1 s
[2026-01-27 07:42:05] 2026-01-27 12:41:30,028 | INFO     | ..............................
[2026-01-27 07:42:05] 2026-01-27 12:41:30,058 | INFO     | time since job start (35814s) is within the limit (349056.0s)
[2026-01-27 07:42:05] 2026-01-27 12:41:30,272 | INFO     | 
[2026-01-27 07:42:05] 2026-01-27 12:41:30,272 | INFO     | job summary report
[2026-01-27 07:42:05] 2026-01-27 12:41:30,272 | INFO     | --------------------------------------------------
[2026-01-27 07:42:05] 2026-01-27 12:41:30,272 | INFO     | PanDA job id: 6976469885
[2026-01-27 07:42:05] 2026-01-27 12:41:30,272 | INFO     | task id: 47961985
[2026-01-27 07:42:05] 2026-01-27 12:41:30,272 | INFO     | errors: (none)
[2026-01-27 07:42:05] 2026-01-27 12:41:30,272 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-27 07:42:05] 2026-01-27 12:41:30,272 | INFO     | pilot state: finished 
[2026-01-27 07:42:05] 2026-01-27 12:41:30,272 | INFO     | transexitcode: 0
[2026-01-27 07:42:05] 2026-01-27 12:41:30,273 | INFO     | exeerrorcode: 0
[2026-01-27 07:42:05] 2026-01-27 12:41:30,273 | INFO     | exeerrordiag: 
[2026-01-27 07:42:05] 2026-01-27 12:41:30,273 | INFO     | exitcode: 0
[2026-01-27 07:42:05] 2026-01-27 12:41:30,273 | INFO     | exitmsg: OK
[2026-01-27 07:42:05] 2026-01-27 12:41:30,273 | INFO     | cpuconsumptiontime: 107473 s
[2026-01-27 07:42:05] 2026-01-27 12:41:30,273 | INFO     | nevents: 350
[2026-01-27 07:42:05] 2026-01-27 12:41:30,273 | INFO     | neventsw: 0
[2026-01-27 07:42:05] 2026-01-27 12:41:30,273 | INFO     | pid: 4002843
[2026-01-27 07:42:05] 2026-01-27 12:41:30,273 | INFO     | pgrp: 4002843
[2026-01-27 07:42:05] 2026-01-27 12:41:30,273 | INFO     | corecount: 10
[2026-01-27 07:42:05] 2026-01-27 12:41:30,273 | INFO     | event service: False
[2026-01-27 07:42:05] 2026-01-27 12:41:30,273 | INFO     | sizes: {0: 2284812, 11: 2284812, 35793: 2326501, 35798: 2335495, 35802: 2335551, 35803: 2335797}
[2026-01-27 07:42:05] 2026-01-27 12:41:30,274 | INFO     | --------------------------------------------------
[2026-01-27 07:42:05] 2026-01-27 12:41:30,274 | INFO     | 
[2026-01-27 07:42:05] 2026-01-27 12:41:30,274 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-27 07:42:05] 2026-01-27 12:41:30,294 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-27 07:42:05] 2026-01-27 12:41:30,295 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-27 07:42:05] 2026-01-27 12:41:30,295 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-27 07:42:05] 2026-01-27 12:41:30,295 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-27 07:42:05] 2026-01-27 12:41:30,295 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-27 07:42:05] 2026-01-27 12:41:30,295 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-27 07:42:05] 2026-01-27 12:41:30,295 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-27 07:42:05] 2026-01-27 12:41:30,295 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-27 07:42:05] 2026-01-27 12:41:30,295 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-27 07:42:05] 2026-01-27 12:41:30,295 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-27 07:42:05] 2026-01-27 12:41:30,295 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-27 07:42:05] 2026-01-27 12:41:30,295 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-27 07:42:05] 2026-01-27 12:41:30,295 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-27 07:42:05] 2026-01-27 12:41:30,295 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-27 07:42:05] 2026-01-27 12:41:30,295 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-27 07:42:05] 2026-01-27 12:41:30,295 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-27 07:42:05] 2026-01-27 12:41:30,296 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-27 07:42:05] 2026-01-27 12:41:30,296 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-27 07:42:05] 2026-01-27 12:41:30,296 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-27 07:42:05] 2026-01-27 12:41:30,296 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-27 07:42:05] 2026-01-27 12:41:30,296 | INFO     | job 6976469885 has completed (purged errors)
[2026-01-27 07:42:05] 2026-01-27 12:41:30,296 | INFO     | overall cleanup function is called
[2026-01-27 07:42:05] 2026-01-27 12:41:31,382 | INFO     | --- collectZombieJob: --- 10, [4002843]
[2026-01-27 07:42:05] 2026-01-27 12:41:31,383 | INFO     | zombie collector waiting for pid 4002843
[2026-01-27 07:42:05] 2026-01-27 12:41:31,383 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 07:42:05] 2026-01-27 12:41:31,383 | INFO     | collected zombie processes
[2026-01-27 07:42:05] 2026-01-27 12:41:31,383 | INFO     | will attempt to kill all subprocesses of pid=4002843
[2026-01-27 07:42:05] 2026-01-27 12:41:31,765 | INFO     | process IDs to be killed: [4002843] (in reverse order)
[2026-01-27 07:42:05] 2026-01-27 12:41:32,605 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 07:42:05] 2026-01-27 12:41:32,606 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 07:42:05] 2026-01-27 12:41:32,626 | INFO     | did not find any defunct processes belonging to 4002843
[2026-01-27 07:42:05] 2026-01-27 12:41:32,646 | INFO     | did not find any defunct processes belonging to 4002843
[2026-01-27 07:42:05] 2026-01-27 12:41:32,646 | INFO     | ready for new job
[2026-01-27 07:42:05] 2026-01-27 12:41:32,646 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 07:42:05] 2026-01-27 12:41:32,649 | INFO     | **************************************
[2026-01-27 07:42:05] 2026-01-27 12:41:32,649 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 07:42:05] 2026-01-27 12:41:32,649 | INFO     | **************************************
[2026-01-27 07:42:05] 2026-01-27 12:41:32,650 | INFO     | 
[2026-01-27 07:42:05] 2026-01-27 12:41:32,659 | INFO     | architecture information:
[2026-01-27 07:42:05] 2026-01-27 12:41:32,659 | INFO     | executing command: cat /etc/os-release
[2026-01-27 07:42:05] 2026-01-27 12:41:32,731 | INFO     | cat /etc/os-release:
[2026-01-27 07:42:05] NAME="CentOS Linux"
[2026-01-27 07:42:05] VERSION="7 (Core)"
[2026-01-27 07:42:05] ID="centos"
[2026-01-27 07:42:05] ID_LIKE="rhel fedora"
[2026-01-27 07:42:05] VERSION_ID="7"
[2026-01-27 07:42:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 07:42:05] ANSI_COLOR="0;31"
[2026-01-27 07:42:05] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 07:42:05] HOME_URL="https://www.centos.org/"
[2026-01-27 07:42:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 07:42:05] 
[2026-01-27 07:42:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 07:42:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 07:42:05] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 07:42:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 07:42:05] 
[2026-01-27 07:42:05] 2026-01-27 12:41:32,731 | INFO     | **************************************
[2026-01-27 07:42:05] 2026-01-27 12:41:33,235 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-27 07:42:05] 2026-01-27 12:41:33,310 | INFO     | sufficient remaining disk space (73886859264 B)
[2026-01-27 07:42:05] 2026-01-27 12:41:33,311 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 07:42:05] 2026-01-27 12:41:33,311 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 07:42:05] 2026-01-27 12:41:33,311 | INFO     | update_server=False
[2026-01-27 07:42:05] 2026-01-27 12:41:33,311 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 07:42:05] 2026-01-27 12:41:33,516 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 07:42:05] 2026-01-27 12:41:33,516 | INFO     | aborting loop
[2026-01-27 07:42:05] 2026-01-27 12:41:33,689 | INFO     | all payload control threads have been joined
[2026-01-27 07:42:05] 2026-01-27 12:41:33,896 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 07:42:05] 2026-01-27 12:41:34,317 | INFO     | [job] retrieve thread has finished
[2026-01-27 07:42:05] 2026-01-27 12:41:34,417 | INFO     | all data control threads have been joined
[2026-01-27 07:42:05] 2026-01-27 12:41:34,478 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 07:42:05] 2026-01-27 12:41:34,522 | INFO     | [job] job monitor thread has finished
[2026-01-27 07:42:05] 2026-01-27 12:41:34,628 | INFO     | all job control threads have been joined
[2026-01-27 07:42:05] 2026-01-27 12:41:34,695 | INFO     | [payload] control thread has finished
[2026-01-27 07:42:05] 2026-01-27 12:41:34,723 | INFO     | [payload] validate_post thread has finished
[2026-01-27 07:42:05] 2026-01-27 12:41:34,904 | INFO     | [data] copytool_in thread has finished
[2026-01-27 07:42:05] 2026-01-27 12:41:34,905 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 07:42:05] 2026-01-27 12:41:34,987 | INFO     | [job] validate thread has finished
[2026-01-27 07:42:05] 2026-01-27 12:41:35,287 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 07:42:05] 2026-01-27 12:41:35,408 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 07:42:05] 2026-01-27 12:41:35,409 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 07:42:05] 2026-01-27 12:41:35,423 | INFO     | [data] control thread has finished
[2026-01-27 07:42:05] 2026-01-27 12:41:35,533 | INFO     | [payload] failed_post thread has finished
[2026-01-27 07:42:05] 2026-01-27 12:41:35,634 | INFO     | [job] control thread has finished
[2026-01-27 07:42:05] 2026-01-27 12:41:35,649 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 07:42:05] 2026-01-27 12:41:35,906 | INFO     | [data] copytool_out thread has finished
[2026-01-27 07:42:05] 2026-01-27 12:41:36,293 | INFO     | [job] queue monitor thread has finished
[2026-01-27 07:42:05] 2026-01-27 12:41:39,658 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 07:42:05] 2026-01-27 12:41:40,793 | INFO     | [monitor] cgroup control has ended
[2026-01-27 07:42:05] 2026-01-27 12:41:42,048 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140521833215808)>', '<ExcThread(monitor, started 140521364240128)>']
[2026-01-27 07:42:05] 2026-01-27 12:41:47,074 | INFO     | all workflow threads have been joined
[2026-01-27 07:42:05] 2026-01-27 12:41:47,074 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 07:42:05] 2026-01-27 12:41:47,091 | INFO     | traces error code: 0
[2026-01-27 07:42:05] 2026-01-27 12:41:47,091 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 07:42:05] 2026-01-27 12:42:03,891 | INFO     | PID=3998080 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-27 07:42:05] 2026-01-27 12:42:03,892 | INFO     | .. there are 9 such processes running
[2026-01-27 07:42:05] 2026-01-27 12:42:03,893 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 07:42:05] 2026-01-27 12:42:03,893 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 07:42:05] 2026-01-27 12:42:03,893 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 07:42:05] 2026-01-27 12:42:03,893 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 07:42:05] 2026-01-27 12:42:03,893 | INFO     | [monitor] control thread has ended
[2026-01-27 07:42:05] 2026-01-27 12:42:04,303 [wrapper] ==== pilot stdout END ====
[2026-01-27 07:42:05] 2026-01-27 12:42:04,356 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 07:42:05] 2026-01-27 12:42:04,403 [wrapper] pilotpid: 3998080
[2026-01-27 07:42:05] 2026-01-27 12:42:04,424 [wrapper] Pilot exit status: 0
[2026-01-27 07:42:05] 2026-01-27 12:42:04,525 [wrapper] pandaids: 6976469885
[2026-01-27 07:42:05] 2026-01-27 12:42:04,937 [wrapper] cleanup supervisor_pilot  944617 3998081
[2026-01-27 07:42:05] 2026-01-27 12:42:04,971 [wrapper] Test setup, not cleaning
[2026-01-27 07:42:05] 2026-01-27 12:42:05,033 [wrapper] apfmon messages muted
[2026-01-27 07:42:05] 2026-01-27 12:42:05,069 [wrapper] ==== wrapper stdout END ====
[2026-01-27 07:42:05] 2026-01-27 12:42:05,121 [wrapper] ==== wrapper stderr END ====
[2026-01-27 07:42:05]  *** Error codes and diagnostics ***
[2026-01-27 07:42:05]     "exeErrorCode": 0,
[2026-01-27 07:42:05]     "exeErrorDiag": "",
[2026-01-27 07:42:05]     "pilotErrorCode": 0,
[2026-01-27 07:42:05]     "pilotErrorDiag": "",
[2026-01-27 07:42:05]  *** Listing of results directory ***
[2026-01-27 07:42:05] total 759876
[2026-01-27 07:42:05] -rw-r--r--. 1 boincer umatlas    584422 Jan 20 09:43 pilot3.tar.gz
[2026-01-27 07:42:05] -rwx------. 1 boincer umatlas     36322 Jan 20 09:56 runpilot2-wrapper.sh
[2026-01-27 07:42:05] -rw-r--r--. 1 boincer umatlas      5111 Jan 20 09:57 queuedata.json
[2026-01-27 07:42:05] -rw-r--r--. 1 boincer umatlas       100 Jan 26 21:44 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 07:42:05] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 26 21:44 run_atlas
[2026-01-27 07:42:05] -rw-r--r--. 1 boincer umatlas       105 Jan 26 21:44 job.xml
[2026-01-27 07:42:05] -rw-r--r--. 2 boincer umatlas 415431342 Jan 26 21:44 EVNT.47961981._000054.pool.root.1
[2026-01-27 07:42:05] -rw-r--r--. 2 boincer umatlas     15845 Jan 26 21:44 start_atlas.sh
[2026-01-27 07:42:05] drwxrwx--x. 2 boincer umatlas      4096 Jan 26 21:44 shared
[2026-01-27 07:42:05] -rw-r--r--. 2 boincer umatlas    597962 Jan 26 21:44 input.tar.gz
[2026-01-27 07:42:05] -rw-r--r--. 1 boincer umatlas         0 Jan 26 21:44 boinc_lockfile
[2026-01-27 07:42:05] -rw-r--r--. 1 boincer umatlas      2876 Jan 26 21:44 pandaJob.out
[2026-01-27 07:42:05] -rw-------. 1 boincer umatlas        57 Jan 26 21:44 setup.sh.local
[2026-01-27 07:42:05] -rw-------. 1 boincer umatlas   1006425 Jan 26 21:44 agis_schedconf.cvmfs.json
[2026-01-27 07:42:05] -rw-------. 1 boincer umatlas       443 Jan 26 21:44 workernode_map.json
[2026-01-27 07:42:05] drwx------. 5 boincer umatlas      4096 Jan 26 21:44 pilot3
[2026-01-27 07:42:05] -rw-r--r--. 1 boincer umatlas       532 Jan 27 07:07 boinc_task_state.xml
[2026-01-27 07:42:05] -rw-r--r--. 1 boincer umatlas      6844 Jan 27 07:36 init_data.xml
[2026-01-27 07:42:05] -rw-------. 1 boincer umatlas 345478230 Jan 27 07:40 HITS.47961985._001633.pool.root.1
[2026-01-27 07:42:05] -rw-------. 1 boincer umatlas      1048 Jan 27 07:41 memory_monitor_summary.json
[2026-01-27 07:42:05] -rw-------. 1 boincer umatlas   1516246 Jan 27 07:41 agis_ddmendpoints.agis.ALL.json
[2026-01-27 07:42:05] -rw-------. 1 boincer umatlas   1890798 Jan 27 07:41 log.47961985._001633.job.log.tgz.1
[2026-01-27 07:42:05] -rw-------. 1 boincer umatlas      6955 Jan 27 07:41 heartbeat.json
[2026-01-27 07:42:05] -rw-r--r--. 1 boincer umatlas      8192 Jan 27 07:42 boinc_mmap_file
[2026-01-27 07:42:05] -rw-r--r--. 1 boincer umatlas        29 Jan 27 07:42 wrapper_checkpoint.txt
[2026-01-27 07:42:05] -rw-------. 1 boincer umatlas        95 Jan 27 07:42 pilot_heartbeat.json
[2026-01-27 07:42:05] -rw-------. 1 boincer umatlas       822 Jan 27 07:42 pilotlog.txt
[2026-01-27 07:42:05] -rw-------. 1 boincer umatlas   4742142 Jan 27 07:42 log.47961985._001633.job.log.1
[2026-01-27 07:42:05] -rw-------. 1 boincer umatlas       353 Jan 27 07:42 output.list
[2026-01-27 07:42:05] -rw-r--r--. 1 boincer umatlas       620 Jan 27 07:42 runtime_log
[2026-01-27 07:42:05] -rw-------. 1 boincer umatlas   6645760 Jan 27 07:42 result.tar.gz
[2026-01-27 07:42:05] -rw-r--r--. 1 boincer umatlas      9354 Jan 27 07:42 runtime_log.err
[2026-01-27 07:42:05] -rw-------. 1 boincer umatlas       662 Jan 27 07:42 3cVKDmQKS28nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmWYvKDmQHAQvm.diag
[2026-01-27 07:42:05] -rw-r--r--. 1 boincer umatlas     21571 Jan 27 07:42 stderr.txt
[2026-01-27 07:42:05] HITS file was successfully produced:
[2026-01-27 07:42:05] -rw-------. 1 boincer umatlas 345478230 Jan 27 07:40 shared/HITS.pool.root.1
[2026-01-27 07:42:05]  *** Contents of shared directory: ***
[2026-01-27 07:42:05] total 750180
[2026-01-27 07:42:05] -rw-r--r--. 2 boincer umatlas 415431342 Jan 26 21:44 ATLAS.root_0
[2026-01-27 07:42:05] -rw-r--r--. 2 boincer umatlas     15845 Jan 26 21:44 start_atlas.sh
[2026-01-27 07:42:05] -rw-r--r--. 2 boincer umatlas    597962 Jan 26 21:44 input.tar.gz
[2026-01-27 07:42:05] -rw-------. 1 boincer umatlas 345478230 Jan 27 07:40 HITS.pool.root.1
[2026-01-27 07:42:05] -rw-------. 1 boincer umatlas   6645760 Jan 27 07:42 result.tar.gz
07:42:07 (3994392): run_atlas exited; CPU time 107756.285805
07:42:07 (3994392): called boinc_finish(0)

</stderr_txt>
]]>

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