Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
03:30:52 (3175480): wrapper (7.7.26015): starting
03:30:52 (3175480): wrapper: running run_atlas (--nthreads 2)
[2026-01-27 03:30:52] Arguments: --nthreads 2
[2026-01-27 03:30:52] Threads: 2
[2026-01-27 03:30:52] Checking for CVMFS
[2026-01-27 03:30:52] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-27 03:30:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-27 03:30:57] Running cvmfs_config stat atlas.cern.ch
[2026-01-27 03:30:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-27 03:30:57] 2.13.3.0 2446218 1747 51248 155569 3 11 3402569 4096001 2766 130560 0 1517717 99.991 68285 701 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-27 03:30:57] CVMFS is ok
[2026-01-27 03:30:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-27 03:30:57] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-27 03:30:57] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-27 03:30:57] Further information can be found at the LHC@home message board.
[2026-01-27 03:30:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-27 03:30:57] Checking for apptainer binary...
[2026-01-27 03:30:57] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-27 03:30:57] Running /usr/bin/apptainer --version
[2026-01-27 03:30:57] apptainer version 1.4.5
[2026-01-27 03:30:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-27 03:30:57] Ryzen-9-7950X3D-Zen4-Ubu24
[2026-01-27 03:30:57] apptainer works
[2026-01-27 03:30:57] Set ATHENA_PROC_NUMBER=2
[2026-01-27 03:30:57] Set ATHENA_CORE_NUMBER=2
[2026-01-27 03:30:57] Starting ATLAS job with PandaID=6977084171
[2026-01-27 03:30:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 06:12:33]  *** The last 200 lines of the pilot log: ***
[2026-01-27 06:12:33] 2026-01-27 05:12:00,534 | INFO     | time since job start (9650s) is within the limit (349056.0s)
[2026-01-27 06:12:33] 2026-01-27 05:12:01,380 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-27 06:12:33] 2026-01-27 05:12:01,433 | INFO     | job 6977084171 has state=finished
[2026-01-27 06:12:33] 2026-01-27 05:12:01,433 | INFO     | preparing for final server update for job 6977084171 in state='finished'
[2026-01-27 06:12:33] 2026-01-27 05:12:01,433 | INFO     | reading metadata from: /var/lib/boinc-client/slots/3/PanDA_Pilot-6977084171/jobReport.json
[2026-01-27 06:12:33] 2026-01-27 05:12:01,435 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/3/workernode_map.json
[2026-01-27 06:12:33] 2026-01-27 05:12:01,435 | INFO     | this job has now completed (state=finished)
[2026-01-27 06:12:33] 2026-01-27 05:12:01,435 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-27 06:12:33] 2026-01-27 05:12:01,435 | INFO     | log transfer has been attempted: DONE
[2026-01-27 06:12:33] 2026-01-27 05:12:01,435 | INFO     | job 6977084171 has finished - writing final server update
[2026-01-27 06:12:33] 2026-01-27 05:12:01,435 | INFO     | total number of processed events: 400 (read)
[2026-01-27 06:12:33] 2026-01-27 05:12:01,438 | INFO     | using path: /var/lib/boinc-client/slots/3/PanDA_Pilot-6977084171/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 06:12:33] 2026-01-27 05:12:01,438 | INFO     | extracted standard info from prmon json
[2026-01-27 06:12:33] 2026-01-27 05:12:01,438 | INFO     | extracted standard memory fields from prmon json
[2026-01-27 06:12:33] 2026-01-27 05:12:01,438 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-27 06:12:33] 2026-01-27 05:12:01,438 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-27 06:12:33] 2026-01-27 05:12:01,438 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-27 06:12:33] 2026-01-27 05:12:01,439 | INFO     | fitting pss+swap vs Time
[2026-01-27 06:12:33] 2026-01-27 05:12:01,439 | INFO     | sum of square deviations: 1223016419.5
[2026-01-27 06:12:33] 2026-01-27 05:12:01,440 | INFO     | sum of deviations: -10734011491.5
[2026-01-27 06:12:33] 2026-01-27 05:12:01,440 | INFO     | mean x: 1769485876.5
[2026-01-27 06:12:33] 2026-01-27 05:12:01,440 | INFO     | mean y: 2271381.7784810127
[2026-01-27 06:12:33] 2026-01-27 05:12:01,440 | INFO     | intersect: 15532464950.367727
[2026-01-27 06:12:33] 2026-01-27 05:12:01,440 | INFO     | chi2: 1.1770096681147513
[2026-01-27 06:12:33] 2026-01-27 05:12:01,440 | INFO     | sum of square deviations: 1110539892.0
[2026-01-27 06:12:33] 2026-01-27 05:12:01,440 | INFO     | sum of deviations: -10850396227.999998
[2026-01-27 06:12:33] 2026-01-27 05:12:01,440 | INFO     | mean x: 1769485724.0
[2026-01-27 06:12:33] 2026-01-27 05:12:01,440 | INFO     | mean y: 2271223.934640523
[2026-01-27 06:12:33] 2026-01-27 05:12:01,440 | INFO     | intersect: 17290818320.25943
[2026-01-27 06:12:33] 2026-01-27 05:12:01,440 | INFO     | chi2: 1.1717204633975562
[2026-01-27 06:12:33] 2026-01-27 05:12:01,440 | INFO     | current chi2=1.1717204633975562 (change=0.44937648861176627 %)
[2026-01-27 06:12:33] 2026-01-27 05:12:01,440 | INFO     | right removable region: 152
[2026-01-27 06:12:33] 2026-01-27 05:12:01,441 | INFO     | sum of square deviations: 1110539892.0
[2026-01-27 06:12:33] 2026-01-27 05:12:01,441 | INFO     | sum of deviations: -18151455301.0
[2026-01-27 06:12:33] 2026-01-27 05:12:01,441 | INFO     | mean x: 1769486029.0
[2026-01-27 06:12:33] 2026-01-27 05:12:01,441 | INFO     | mean y: 2280965.202614379
[2026-01-27 06:12:33] 2026-01-27 05:12:01,441 | INFO     | intersect: 28924021456.03182
[2026-01-27 06:12:33] 2026-01-27 05:12:01,441 | INFO     | chi2: 0.10683941128714841
[2026-01-27 06:12:33] 2026-01-27 05:12:01,441 | INFO     | current chi2=0.10683941128714841 (change=90.9228093717976 %)
[2026-01-27 06:12:33] 2026-01-27 05:12:01,441 | INFO     | sum of square deviations: 1005179777.0
[2026-01-27 06:12:33] 2026-01-27 05:12:01,442 | INFO     | sum of deviations: -14779994847.499998
[2026-01-27 06:12:33] 2026-01-27 05:12:01,442 | INFO     | mean x: 1769486181.5
[2026-01-27 06:12:33] 2026-01-27 05:12:01,442 | INFO     | mean y: 2276092.493243243
[2026-01-27 06:12:33] 2026-01-27 05:12:01,442 | INFO     | intersect: 26020504118.67492
[2026-01-27 06:12:33] 2026-01-27 05:12:01,442 | INFO     | chi2: 0.10146302895127665
[2026-01-27 06:12:33] 2026-01-27 05:12:01,442 | INFO     | current chi2=0.10146302895127665 (change=5.032208874140885 %)
[2026-01-27 06:12:33] 2026-01-27 05:12:01,442 | INFO     | left removable region: 20
[2026-01-27 06:12:33] 2026-01-27 05:12:01,442 | INFO     | sum of square deviations: 713140813.0
[2026-01-27 06:12:33] 2026-01-27 05:12:01,442 | INFO     | sum of deviations: -8376858000.999997
[2026-01-27 06:12:33] 2026-01-27 05:12:01,442 | INFO     | mean x: 1769486303.5
[2026-01-27 06:12:33] 2026-01-27 05:12:01,442 | INFO     | mean y: 2264878.696969697
[2026-01-27 06:12:33] 2026-01-27 05:12:01,442 | INFO     | intersect: 20787410293.07656
[2026-01-27 06:12:33] 2026-01-27 05:12:01,442 | INFO     | chi2: 0.08030613932024418
[2026-01-27 06:12:33] 2026-01-27 05:12:01,443 | INFO     | current memory leak: -11.75 B/s (using 132 data points, chi2=0.08)
[2026-01-27 06:12:33] 2026-01-27 05:12:01,443 | INFO     | could have reported an average CPU frequency of 4502 MHz (9 samples)
[2026-01-27 06:12:33] 2026-01-27 05:12:01,443 | INFO     | ..............................
[2026-01-27 06:12:33] 2026-01-27 05:12:01,443 | INFO     | . Timing measurements:
[2026-01-27 06:12:33] 2026-01-27 05:12:01,443 | INFO     | . get job = 0 s
[2026-01-27 06:12:33] 2026-01-27 05:12:01,443 | INFO     | . initial setup = 4 s
[2026-01-27 06:12:33] 2026-01-27 05:12:01,443 | INFO     | . payload setup = 3 s
[2026-01-27 06:12:33] 2026-01-27 05:12:01,443 | INFO     | . stage-in = 0 s
[2026-01-27 06:12:33] 2026-01-27 05:12:01,443 | INFO     | . payload execution = 9629 s
[2026-01-27 06:12:33] 2026-01-27 05:12:01,443 | INFO     | . stage-out = 0 s
[2026-01-27 06:12:33] 2026-01-27 05:12:01,443 | INFO     | . log creation = 0 s
[2026-01-27 06:12:33] 2026-01-27 05:12:01,443 | INFO     | ..............................
[2026-01-27 06:12:33] 2026-01-27 05:12:01,483 | INFO     | 
[2026-01-27 06:12:33] 2026-01-27 05:12:01,483 | INFO     | job summary report
[2026-01-27 06:12:33] 2026-01-27 05:12:01,483 | INFO     | --------------------------------------------------
[2026-01-27 06:12:33] 2026-01-27 05:12:01,483 | INFO     | PanDA job id: 6977084171
[2026-01-27 06:12:33] 2026-01-27 05:12:01,483 | INFO     | task id: 48299629
[2026-01-27 06:12:33] 2026-01-27 05:12:01,483 | INFO     | errors: (none)
[2026-01-27 06:12:33] 2026-01-27 05:12:01,483 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-27 06:12:33] 2026-01-27 05:12:01,483 | INFO     | pilot state: finished 
[2026-01-27 06:12:33] 2026-01-27 05:12:01,483 | INFO     | transexitcode: 0
[2026-01-27 06:12:33] 2026-01-27 05:12:01,483 | INFO     | exeerrorcode: 0
[2026-01-27 06:12:33] 2026-01-27 05:12:01,483 | INFO     | exeerrordiag: 
[2026-01-27 06:12:33] 2026-01-27 05:12:01,483 | INFO     | exitcode: 0
[2026-01-27 06:12:33] 2026-01-27 05:12:01,483 | INFO     | exitmsg: OK
[2026-01-27 06:12:33] 2026-01-27 05:12:01,483 | INFO     | cpuconsumptiontime: 18972 s
[2026-01-27 06:12:33] 2026-01-27 05:12:01,483 | INFO     | nevents: 400
[2026-01-27 06:12:33] 2026-01-27 05:12:01,483 | INFO     | neventsw: 0
[2026-01-27 06:12:33] 2026-01-27 05:12:01,483 | INFO     | pid: 3184321
[2026-01-27 06:12:33] 2026-01-27 05:12:01,483 | INFO     | pgrp: 3184321
[2026-01-27 06:12:33] 2026-01-27 05:12:01,483 | INFO     | corecount: 2
[2026-01-27 06:12:33] 2026-01-27 05:12:01,483 | INFO     | event service: False
[2026-01-27 06:12:33] 2026-01-27 05:12:01,483 | INFO     | sizes: {0: 2284387, 11: 2284387, 9636: 2313096, 9637: 2322163, 9640: 2322421}
[2026-01-27 06:12:33] 2026-01-27 05:12:01,483 | INFO     | --------------------------------------------------
[2026-01-27 06:12:33] 2026-01-27 05:12:01,483 | INFO     | 
[2026-01-27 06:12:33] 2026-01-27 05:12:01,483 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/3
[2026-01-27 06:12:33] 2026-01-27 05:12:01,509 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-27 06:12:33] 2026-01-27 05:12:01,509 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-27 06:12:33] 2026-01-27 05:12:01,509 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-27 06:12:33] 2026-01-27 05:12:01,509 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-27 06:12:33] 2026-01-27 05:12:01,509 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-27 06:12:33] 2026-01-27 05:12:01,509 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-27 06:12:33] 2026-01-27 05:12:01,509 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-27 06:12:33] 2026-01-27 05:12:01,510 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-27 06:12:33] 2026-01-27 05:12:01,510 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-27 06:12:33] 2026-01-27 05:12:01,510 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-27 06:12:33] 2026-01-27 05:12:01,510 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-27 06:12:33] 2026-01-27 05:12:01,510 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-27 06:12:33] 2026-01-27 05:12:01,510 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-27 06:12:33] 2026-01-27 05:12:01,510 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-27 06:12:33] 2026-01-27 05:12:01,510 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-27 06:12:33] 2026-01-27 05:12:01,510 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-27 06:12:33] 2026-01-27 05:12:01,510 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-27 06:12:33] 2026-01-27 05:12:01,510 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-27 06:12:33] 2026-01-27 05:12:01,510 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-27 06:12:33] 2026-01-27 05:12:01,510 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-27 06:12:33] 2026-01-27 05:12:01,510 | INFO     | job 6977084171 has completed (purged errors)
[2026-01-27 06:12:33] 2026-01-27 05:12:01,510 | INFO     | overall cleanup function is called
[2026-01-27 06:12:33] 2026-01-27 05:12:02,517 | INFO     | --- collectZombieJob: --- 10, [3184321]
[2026-01-27 06:12:33] 2026-01-27 05:12:02,517 | INFO     | zombie collector waiting for pid 3184321
[2026-01-27 06:12:33] 2026-01-27 05:12:02,517 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 06:12:33] 2026-01-27 05:12:02,517 | INFO     | collected zombie processes
[2026-01-27 06:12:33] 2026-01-27 05:12:02,517 | INFO     | will attempt to kill all subprocesses of pid=3184321
[2026-01-27 06:12:33] 2026-01-27 05:12:02,566 | INFO     | process IDs to be killed: [3184321] (in reverse order)
[2026-01-27 06:12:33] 2026-01-27 05:12:02,598 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 06:12:33] 2026-01-27 05:12:02,599 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 06:12:33] 2026-01-27 05:12:02,600 | INFO     | did not find any defunct processes belonging to 3184321
[2026-01-27 06:12:33] 2026-01-27 05:12:02,602 | INFO     | did not find any defunct processes belonging to 3184321
[2026-01-27 06:12:33] 2026-01-27 05:12:02,602 | INFO     | ready for new job
[2026-01-27 06:12:33] 2026-01-27 05:12:02,602 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 06:12:33] 2026-01-27 05:12:02,603 | INFO     | **************************************
[2026-01-27 06:12:33] 2026-01-27 05:12:02,603 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 06:12:33] 2026-01-27 05:12:02,603 | INFO     | **************************************
[2026-01-27 06:12:33] 2026-01-27 05:12:02,603 | INFO     | 
[2026-01-27 06:12:33] 2026-01-27 05:12:02,604 | INFO     | architecture information:
[2026-01-27 06:12:33] 2026-01-27 05:12:02,604 | INFO     | executing command: cat /etc/os-release
[2026-01-27 06:12:33] 2026-01-27 05:12:02,621 | INFO     | cat /etc/os-release:
[2026-01-27 06:12:33] NAME="CentOS Linux"
[2026-01-27 06:12:33] VERSION="7 (Core)"
[2026-01-27 06:12:33] ID="centos"
[2026-01-27 06:12:33] ID_LIKE="rhel fedora"
[2026-01-27 06:12:33] VERSION_ID="7"
[2026-01-27 06:12:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 06:12:33] ANSI_COLOR="0;31"
[2026-01-27 06:12:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 06:12:33] HOME_URL="https://www.centos.org/"
[2026-01-27 06:12:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 06:12:33] 
[2026-01-27 06:12:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 06:12:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 06:12:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 06:12:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 06:12:33] 
[2026-01-27 06:12:33] 2026-01-27 05:12:02,621 | INFO     | **************************************
[2026-01-27 06:12:33] 2026-01-27 05:12:03,123 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/3
[2026-01-27 06:12:33] 2026-01-27 05:12:03,145 | INFO     | sufficient remaining disk space (1768202174464 B)
[2026-01-27 06:12:33] 2026-01-27 05:12:03,145 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 06:12:33] 2026-01-27 05:12:03,145 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 06:12:33] 2026-01-27 05:12:03,145 | INFO     | update_server=False
[2026-01-27 06:12:33] 2026-01-27 05:12:03,145 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 06:12:33] 2026-01-27 05:12:03,145 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 06:12:33] 2026-01-27 05:12:03,145 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 06:12:33] 2026-01-27 05:12:03,324 | INFO     | job.realtimelogging is not enabled
[2026-01-27 06:12:33] 2026-01-27 05:12:03,428 | INFO     | all data control threads have been joined
[2026-01-27 06:12:33] 2026-01-27 05:12:03,799 | INFO     | all job control threads have been joined
[2026-01-27 06:12:33] 2026-01-27 05:12:03,909 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 06:12:33] 2026-01-27 05:12:03,909 | INFO     | aborting loop
[2026-01-27 06:12:33] 2026-01-27 05:12:04,103 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 06:12:33] 2026-01-27 05:12:04,145 | INFO     | [job] retrieve thread has finished
[2026-01-27 06:12:33] 2026-01-27 05:12:04,150 | INFO     | [job] queue monitor thread has finished
[2026-01-27 06:12:33] 2026-01-27 05:12:04,312 | INFO     | all payload control threads have been joined
[2026-01-27 06:12:33] 2026-01-27 05:12:04,329 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 06:12:33] 2026-01-27 05:12:04,433 | INFO     | [data] control thread has finished
[2026-01-27 06:12:33] 2026-01-27 05:12:04,564 | INFO     | [job] validate thread has finished
[2026-01-27 06:12:33] 2026-01-27 05:12:04,707 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 06:12:33] 2026-01-27 05:12:04,791 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 06:12:33] 2026-01-27 05:12:04,792 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 06:12:33] 2026-01-27 05:12:04,804 | INFO     | [job] control thread has finished
[2026-01-27 06:12:33] 2026-01-27 05:12:04,808 | INFO     | [payload] failed_post thread has finished
[2026-01-27 06:12:33] 2026-01-27 05:12:04,914 | INFO     | [job] job monitor thread has finished
[2026-01-27 06:12:33] 2026-01-27 05:12:04,927 | INFO     | [data] copytool_in thread has finished
[2026-01-27 06:12:33] 2026-01-27 05:12:05,317 | INFO     | [payload] control thread has finished
[2026-01-27 06:12:33] 2026-01-27 05:12:05,459 | INFO     | [payload] validate_post thread has finished
[2026-01-27 06:12:33] 2026-01-27 05:12:06,109 | INFO     | [data] copytool_out thread has finished
[2026-01-27 06:12:33] 2026-01-27 05:12:07,150 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 06:12:33] 2026-01-27 05:12:25,661 | INFO     | [monitor] cgroup control has ended
[2026-01-27 06:12:33] 2026-01-27 05:12:26,243 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 127484512212800)>', '<ExcThread(monitor, started 127483202492160)>']
[2026-01-27 06:12:33] 2026-01-27 05:12:31,268 | INFO     | all workflow threads have been joined
[2026-01-27 06:12:33] 2026-01-27 05:12:31,268 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 06:12:33] 2026-01-27 05:12:31,268 | INFO     | traces error code: 0
[2026-01-27 06:12:33] 2026-01-27 05:12:31,268 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 06:12:33] 2026-01-27 05:12:33,656 | INFO     | PID=3179705 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-27 06:12:33] 2026-01-27 05:12:33,656 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 06:12:33] 2026-01-27 05:12:33,656 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 06:12:33] 2026-01-27 05:12:33,656 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 06:12:33] 2026-01-27 05:12:33,656 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 06:12:33] 2026-01-27 05:12:33,656 | INFO     | [monitor] control thread has ended
[2026-01-27 06:12:33] 2026-01-27 05:12:33,716 [wrapper] ==== pilot stdout END ====
[2026-01-27 06:12:33] 2026-01-27 05:12:33,720 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 06:12:33] 2026-01-27 05:12:33,723 [wrapper] pilotpid: 3179705
[2026-01-27 06:12:33] 2026-01-27 05:12:33,728 [wrapper] Pilot exit status: 0
[2026-01-27 06:12:33] 2026-01-27 05:12:33,738 [wrapper] pandaids: 6977084171
[2026-01-27 06:12:33] 2026-01-27 05:12:33,763 [wrapper] cleanup supervisor_pilot 3222337 3179706
[2026-01-27 06:12:33] 2026-01-27 05:12:33,765 [wrapper] Test setup, not cleaning
[2026-01-27 06:12:33] 2026-01-27 05:12:33,768 [wrapper] apfmon messages muted
[2026-01-27 06:12:33] 2026-01-27 05:12:33,770 [wrapper] ==== wrapper stdout END ====
[2026-01-27 06:12:33] 2026-01-27 05:12:33,772 [wrapper] ==== wrapper stderr END ====
[2026-01-27 06:12:33]  *** Error codes and diagnostics ***
[2026-01-27 06:12:33]     "exeErrorCode": 0,
[2026-01-27 06:12:33]     "exeErrorDiag": "",
[2026-01-27 06:12:33]     "pilotErrorCode": 0,
[2026-01-27 06:12:33]     "pilotErrorDiag": "",
[2026-01-27 06:12:33]  *** Listing of results directory ***
[2026-01-27 06:12:33] total 417224
[2026-01-27 06:12:33] -rw-r--r-- 1 boinc boinc    584422 Jan 21 04:29 pilot3.tar.gz
[2026-01-27 06:12:33] -rwx------ 1 boinc boinc     36322 Jan 21 04:30 runpilot2-wrapper.sh
[2026-01-27 06:12:33] -rw-r--r-- 1 boinc boinc      5111 Jan 21 04:31 queuedata.json
[2026-01-27 06:12:33] -rw-r--r-- 1 boinc boinc       100 Jan 27 03:30 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 06:12:33] -rwxr-xr-x 1 boinc boinc      7986 Jan 27 03:30 run_atlas
[2026-01-27 06:12:33] -rw-r--r-- 1 boinc boinc       105 Jan 27 03:30 job.xml
[2026-01-27 06:12:33] -rw-r--r-- 1 boinc boinc      9567 Jan 27 03:30 init_data.xml
[2026-01-27 06:12:33] -rw-r--r-- 2 boinc boinc 253090418 Jan 27 03:30 EVNT.48299627._000010.pool.root.1
[2026-01-27 06:12:33] -rw-r--r-- 2 boinc boinc     15845 Jan 27 03:30 start_atlas.sh
[2026-01-27 06:12:33] drwxrwx--x 2 boinc boinc      4096 Jan 27 03:30 shared
[2026-01-27 06:12:33] -rw-r--r-- 2 boinc boinc    597772 Jan 27 03:30 input.tar.gz
[2026-01-27 06:12:33] -rw-r--r-- 1 boinc boinc         0 Jan 27 03:30 boinc_lockfile
[2026-01-27 06:12:33] -rw-r--r-- 1 boinc boinc      2622 Jan 27 03:30 pandaJob.out
[2026-01-27 06:12:33] -rw------- 1 boinc boinc   1006425 Jan 27 03:31 agis_schedconf.cvmfs.json
[2026-01-27 06:12:33] -rw------- 1 boinc boinc   1516246 Jan 27 03:31 agis_ddmendpoints.agis.ALL.json
[2026-01-27 06:12:33] -rw------- 1 boinc boinc       444 Jan 27 03:31 workernode_map.json
[2026-01-27 06:12:33] drwx------ 5 boinc boinc      4096 Jan 27 03:31 pilot3
[2026-01-27 06:12:33] -rw------- 1 boinc boinc 166776641 Jan 27 06:11 HITS.48299629._000234.pool.root.1
[2026-01-27 06:12:33] -rw------- 1 boinc boinc      1023 Jan 27 06:11 memory_monitor_summary.json
[2026-01-27 06:12:33] -rw------- 1 boinc boinc    303990 Jan 27 06:11 log.48299629._000234.job.log.tgz.1
[2026-01-27 06:12:33] -rw------- 1 boinc boinc      6343 Jan 27 06:12 heartbeat.json
[2026-01-27 06:12:33] -rw------- 1 boinc boinc        95 Jan 27 06:12 pilot_heartbeat.json
[2026-01-27 06:12:33] -rw-r--r-- 1 boinc boinc       529 Jan 27 06:12 boinc_task_state.xml
[2026-01-27 06:12:33] -rw-r--r-- 1 boinc boinc        27 Jan 27 06:12 wrapper_checkpoint.txt
[2026-01-27 06:12:33] -rw------- 1 boinc boinc       747 Jan 27 06:12 pilotlog.txt
[2026-01-27 06:12:33] -rw------- 1 boinc boinc   1411395 Jan 27 06:12 log.48299629._000234.job.log.1
[2026-01-27 06:12:33] -rw------- 1 boinc boinc       357 Jan 27 06:12 output.list
[2026-01-27 06:12:33] -rw-r--r-- 1 boinc boinc       620 Jan 27 06:12 runtime_log
[2026-01-27 06:12:33] -rw------- 1 boinc boinc   1730560 Jan 27 06:12 result.tar.gz
[2026-01-27 06:12:33] -rw------- 1 boinc boinc       657 Jan 27 06:12 YAOLDmT6d28nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmQsxKDmZJni2n.diag
[2026-01-27 06:12:33] -rw-r--r-- 1 boinc boinc      8968 Jan 27 06:12 runtime_log.err
[2026-01-27 06:12:33] -rw-r--r-- 1 boinc boinc      8192 Jan 27 06:12 boinc_mmap_file
[2026-01-27 06:12:33] -rw-r--r-- 1 boinc boinc     21349 Jan 27 06:12 stderr.txt
[2026-01-27 06:12:33] HITS file was successfully produced:
[2026-01-27 06:12:33] -rw------- 1 boinc boinc 166776641 Jan 27 06:11 shared/HITS.pool.root.1
[2026-01-27 06:12:33]  *** Contents of shared directory: ***
[2026-01-27 06:12:33] total 412328
[2026-01-27 06:12:33] -rw-r--r-- 2 boinc boinc 253090418 Jan 27 03:30 ATLAS.root_0
[2026-01-27 06:12:33] -rw-r--r-- 2 boinc boinc     15845 Jan 27 03:30 start_atlas.sh
[2026-01-27 06:12:33] -rw-r--r-- 2 boinc boinc    597772 Jan 27 03:30 input.tar.gz
[2026-01-27 06:12:33] -rw------- 1 boinc boinc 166776641 Jan 27 06:11 HITS.pool.root.1
[2026-01-27 06:12:33] -rw------- 1 boinc boinc   1730560 Jan 27 06:12 result.tar.gz
06:12:35 (3175480): run_atlas exited; CPU time 18996.977598
06:12:35 (3175480): called boinc_finish(0)

</stderr_txt>
]]>

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