Stderr output

<core_client_version>8.2.6</core_client_version>
<![CDATA[
<stderr_txt>
20:32:42 (429585): wrapper (7.7.26015): starting
20:32:42 (429585): wrapper: running run_atlas (--nthreads 8)
[2026-01-26 20:32:42] Arguments: --nthreads 8
[2026-01-26 20:32:42] Threads: 8
[2026-01-26 20:32:42] Checking for CVMFS
[2026-01-26 20:32:42] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 20:32:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 20:32:43] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 20:32:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 20:32:43] 2.13.3.0 3958828 597 51908 155571 3 188 4623713 20480000 2766 130560 0 1966090 99.997 25253 703 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-26 20:32:43] CVMFS is ok
[2026-01-26 20:32:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 20:32:43] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-26 20:32:43] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-26 20:32:43] Further information can be found at the LHC@home message board.
[2026-01-26 20:32:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 20:32:43] Checking for apptainer binary...
[2026-01-26 20:32:43] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 20:32:43] Running /usr/bin/apptainer --version
[2026-01-26 20:32:43] apptainer version 1.4.4
[2026-01-26 20:32:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 20:32:43] garage
[2026-01-26 20:32:43] apptainer works
[2026-01-26 20:32:43] Set ATHENA_PROC_NUMBER=8
[2026-01-26 20:32:43] Set ATHENA_CORE_NUMBER=8
[2026-01-26 20:32:43] Starting ATLAS job with PandaID=6983771005
[2026-01-26 20:32:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/13 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 21:20:07]  *** The last 200 lines of the pilot log: ***
[2026-01-26 21:20:07]  is_tar=False
[2026-01-26 21:20:07]  lfn=log.48318034._002125.job.log.tgz.1
[2026-01-26 21:20:07]  mtime=0
[2026-01-26 21:20:07]  protocol_id=None
[2026-01-26 21:20:07]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-26 21:20:07]  replicas=None
[2026-01-26 21:20:07]  scope=mc23_13p6TeV
[2026-01-26 21:20:07]  status=None
[2026-01-26 21:20:07]  status_code=0
[2026-01-26 21:20:07]  storage_token=
[2026-01-26 21:20:07]  surl=/var/lib/boinc-client/slots/13/PanDA_Pilot-6983771005/log.48318034._002125.job.log.tgz.1
[2026-01-26 21:20:07]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ff/c9/log.48318034._002125.job.log.tgz.1
[2026-01-26 21:20:07]  workdir=None
[2026-01-26 21:20:07] ]
[2026-01-26 21:20:07] 2026-01-27 04:19:18,603 | INFO     | transferring file log.48318034._002125.job.log.tgz.1 from /var/lib/boinc-client/slots/13/PanDA_Pilot-6983771005/log.48318034._002125.job.log.tgz.1 to /var/lib/boin
[2026-01-26 21:20:07] 2026-01-27 04:19:18,604 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/13/PanDA_Pilot-6983771005/log.48318034._002125.job.log.tgz.1 /var/lib/boinc-client/slots/13/log.4831
[2026-01-26 21:20:07] 2026-01-27 04:19:18,616 | INFO     | adding to output.list: log.48318034._002125.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ff/c9/log.48318034._002125.job.log.tg
[2026-01-26 21:20:07] 2026-01-27 04:19:18,616 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-26 21:20:07] 2026-01-27 04:19:18,616 | INFO     | summary of transferred files:
[2026-01-26 21:20:07] 2026-01-27 04:19:18,616 | INFO     |  -- lfn=log.48318034._002125.job.log.tgz.1, status_code=0, status=transferred
[2026-01-26 21:20:07] 2026-01-27 04:19:18,616 | INFO     | stage-out finished correctly
[2026-01-26 21:20:07] 2026-01-27 04:19:19,355 | WARNING  | process 438254 can no longer be monitored (due to stat problems) - aborting
[2026-01-26 21:20:07] 2026-01-27 04:19:19,355 | INFO     | using path: /var/lib/boinc-client/slots/13/PanDA_Pilot-6983771005/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 21:20:07] 2026-01-27 04:19:19,434 | INFO     | number of running child processes to parent process 438254: 1
[2026-01-26 21:20:07] 2026-01-27 04:19:19,434 | INFO     | maximum number of monitored processes: 6
[2026-01-26 21:20:07] 2026-01-27 04:19:20,485 | INFO     | time since job start (2783s) is within the limit (349056.0s)
[2026-01-26 21:20:07] 2026-01-27 04:19:21,740 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-26 21:20:07] 2026-01-27 04:19:21,940 | INFO     | monitor loop #214: job 0:6983771005 is in state 'finished'
[2026-01-26 21:20:07] 2026-01-27 04:19:21,941 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-26 21:20:07] 2026-01-27 04:19:22,491 | INFO     | time since job start (2785s) is within the limit (349056.0s)
[2026-01-26 21:20:07] 2026-01-27 04:19:23,103 | INFO     | job 6983771005 has state=finished
[2026-01-26 21:20:07] 2026-01-27 04:19:23,103 | INFO     | preparing for final server update for job 6983771005 in state='finished'
[2026-01-26 21:20:07] 2026-01-27 04:19:23,103 | INFO     | reading metadata from: /var/lib/boinc-client/slots/13/PanDA_Pilot-6983771005/jobReport.json
[2026-01-26 21:20:07] 2026-01-27 04:19:23,104 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/13/workernode_map.json
[2026-01-26 21:20:07] 2026-01-27 04:19:23,105 | INFO     | this job has now completed (state=finished)
[2026-01-26 21:20:07] 2026-01-27 04:19:23,105 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-26 21:20:07] 2026-01-27 04:19:23,105 | INFO     | log transfer has been attempted: DONE
[2026-01-26 21:20:07] 2026-01-27 04:19:23,105 | INFO     | job 6983771005 has finished - writing final server update
[2026-01-26 21:20:07] 2026-01-27 04:19:23,105 | INFO     | total number of processed events: 400 (read)
[2026-01-26 21:20:07] 2026-01-27 04:19:23,108 | INFO     | using path: /var/lib/boinc-client/slots/13/PanDA_Pilot-6983771005/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 21:20:07] 2026-01-27 04:19:23,108 | INFO     | extracted standard info from prmon json
[2026-01-26 21:20:07] 2026-01-27 04:19:23,108 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 21:20:07] 2026-01-27 04:19:23,108 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 21:20:07] 2026-01-27 04:19:23,108 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 21:20:07] 2026-01-27 04:19:23,108 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 21:20:07] 2026-01-27 04:19:23,109 | INFO     | fitting pss+swap vs Time
[2026-01-26 21:20:07] 2026-01-27 04:19:23,109 | INFO     | sum of square deviations: 18381740.0
[2026-01-26 21:20:07] 2026-01-27 04:19:23,109 | INFO     | sum of deviations: -656746984.0
[2026-01-26 21:20:07] 2026-01-27 04:19:23,109 | INFO     | mean x: 1769486258.0
[2026-01-26 21:20:07] 2026-01-27 04:19:23,109 | INFO     | mean y: 2600937.641025641
[2026-01-26 21:20:07] 2026-01-27 04:19:23,109 | INFO     | intersect: 63223208082.0651
[2026-01-26 21:20:07] 2026-01-27 04:19:23,109 | INFO     | chi2: 0.005425574957240928
[2026-01-26 21:20:07] 2026-01-27 04:19:23,109 | INFO     | current memory leak: -35.73 B/s (using 39 data points, chi2=0.01)
[2026-01-26 21:20:07] 2026-01-27 04:19:23,110 | INFO     | could have reported an average CPU frequency of 4361 MHz (5 samples)
[2026-01-26 21:20:07] 2026-01-27 04:19:23,110 | INFO     | ..............................
[2026-01-26 21:20:07] 2026-01-27 04:19:23,110 | INFO     | . Timing measurements:
[2026-01-26 21:20:07] 2026-01-27 04:19:23,110 | INFO     | . get job = 0 s
[2026-01-26 21:20:07] 2026-01-27 04:19:23,110 | INFO     | . initial setup = 6 s
[2026-01-26 21:20:07] 2026-01-27 04:19:23,110 | INFO     | . payload setup = 3 s
[2026-01-26 21:20:07] 2026-01-27 04:19:23,110 | INFO     | . stage-in = 0 s
[2026-01-26 21:20:07] 2026-01-27 04:19:23,110 | INFO     | . payload execution = 2762 s
[2026-01-26 21:20:07] 2026-01-27 04:19:23,110 | INFO     | . stage-out = 0 s
[2026-01-26 21:20:07] 2026-01-27 04:19:23,110 | INFO     | . log creation = 0 s
[2026-01-26 21:20:07] 2026-01-27 04:19:23,110 | INFO     | ..............................
[2026-01-26 21:20:07] 2026-01-27 04:19:23,154 | INFO     | 
[2026-01-26 21:20:07] 2026-01-27 04:19:23,154 | INFO     | job summary report
[2026-01-26 21:20:07] 2026-01-27 04:19:23,154 | INFO     | --------------------------------------------------
[2026-01-26 21:20:07] 2026-01-27 04:19:23,154 | INFO     | PanDA job id: 6983771005
[2026-01-26 21:20:07] 2026-01-27 04:19:23,154 | INFO     | task id: 48318034
[2026-01-26 21:20:07] 2026-01-27 04:19:23,154 | INFO     | errors: (none)
[2026-01-26 21:20:07] 2026-01-27 04:19:23,154 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 21:20:07] 2026-01-27 04:19:23,154 | INFO     | pilot state: finished 
[2026-01-26 21:20:07] 2026-01-27 04:19:23,154 | INFO     | transexitcode: 0
[2026-01-26 21:20:07] 2026-01-27 04:19:23,154 | INFO     | exeerrorcode: 0
[2026-01-26 21:20:07] 2026-01-27 04:19:23,154 | INFO     | exeerrordiag: 
[2026-01-26 21:20:07] 2026-01-27 04:19:23,154 | INFO     | exitcode: 0
[2026-01-26 21:20:07] 2026-01-27 04:19:23,154 | INFO     | exitmsg: OK
[2026-01-26 21:20:07] 2026-01-27 04:19:23,154 | INFO     | cpuconsumptiontime: 19461 s
[2026-01-26 21:20:07] 2026-01-27 04:19:23,154 | INFO     | nevents: 400
[2026-01-26 21:20:07] 2026-01-27 04:19:23,154 | INFO     | neventsw: 0
[2026-01-26 21:20:07] 2026-01-27 04:19:23,154 | INFO     | pid: 438254
[2026-01-26 21:20:07] 2026-01-27 04:19:23,154 | INFO     | pgrp: 438254
[2026-01-26 21:20:07] 2026-01-27 04:19:23,154 | INFO     | corecount: 8
[2026-01-26 21:20:07] 2026-01-27 04:19:23,154 | INFO     | event service: False
[2026-01-26 21:20:07] 2026-01-27 04:19:23,154 | INFO     | sizes: {0: 2283109, 1: 2284235, 11: 2284235, 2769: 2309596, 2771: 2318610, 2774: 2318666, 2775: 2319020}
[2026-01-26 21:20:07] 2026-01-27 04:19:23,154 | INFO     | --------------------------------------------------
[2026-01-26 21:20:07] 2026-01-27 04:19:23,154 | INFO     | 
[2026-01-26 21:20:07] 2026-01-27 04:19:23,154 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/13
[2026-01-26 21:20:07] 2026-01-27 04:19:23,168 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 21:20:07] 2026-01-27 04:19:23,168 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 21:20:07] 2026-01-27 04:19:23,168 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 21:20:07] 2026-01-27 04:19:23,168 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 21:20:07] 2026-01-27 04:19:23,168 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 21:20:07] 2026-01-27 04:19:23,168 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 21:20:07] 2026-01-27 04:19:23,168 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 21:20:07] 2026-01-27 04:19:23,168 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 21:20:07] 2026-01-27 04:19:23,168 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 21:20:07] 2026-01-27 04:19:23,168 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 21:20:07] 2026-01-27 04:19:23,168 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 21:20:07] 2026-01-27 04:19:23,168 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 21:20:07] 2026-01-27 04:19:23,168 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 21:20:07] 2026-01-27 04:19:23,169 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 21:20:07] 2026-01-27 04:19:23,169 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 21:20:07] 2026-01-27 04:19:23,169 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 21:20:07] 2026-01-27 04:19:23,169 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 21:20:07] 2026-01-27 04:19:23,169 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 21:20:07] 2026-01-27 04:19:23,169 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 21:20:07] 2026-01-27 04:19:23,169 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 21:20:07] 2026-01-27 04:19:23,169 | INFO     | job 6983771005 has completed (purged errors)
[2026-01-26 21:20:07] 2026-01-27 04:19:23,169 | INFO     | overall cleanup function is called
[2026-01-26 21:20:07] 2026-01-27 04:19:24,176 | INFO     | --- collectZombieJob: --- 10, [438254]
[2026-01-26 21:20:07] 2026-01-27 04:19:24,176 | INFO     | zombie collector waiting for pid 438254
[2026-01-26 21:20:07] 2026-01-27 04:19:24,176 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 21:20:07] 2026-01-27 04:19:24,176 | INFO     | collected zombie processes
[2026-01-26 21:20:07] 2026-01-27 04:19:24,176 | INFO     | will attempt to kill all subprocesses of pid=438254
[2026-01-26 21:20:07] 2026-01-27 04:19:24,263 | INFO     | process IDs to be killed: [438254] (in reverse order)
[2026-01-26 21:20:07] 2026-01-27 04:19:24,301 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 21:20:07] 2026-01-27 04:19:24,301 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 21:20:07] 2026-01-27 04:19:24,305 | INFO     | did not find any defunct processes belonging to 438254
[2026-01-26 21:20:07] 2026-01-27 04:19:24,307 | INFO     | did not find any defunct processes belonging to 438254
[2026-01-26 21:20:07] 2026-01-27 04:19:24,307 | INFO     | ready for new job
[2026-01-26 21:20:07] 2026-01-27 04:19:24,308 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 21:20:07] 2026-01-27 04:19:24,308 | INFO     | **************************************
[2026-01-26 21:20:07] 2026-01-27 04:19:24,309 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 21:20:07] 2026-01-27 04:19:24,309 | INFO     | **************************************
[2026-01-26 21:20:07] 2026-01-27 04:19:24,309 | INFO     | 
[2026-01-26 21:20:07] 2026-01-27 04:19:24,310 | INFO     | architecture information:
[2026-01-26 21:20:07] 2026-01-27 04:19:24,310 | INFO     | executing command: cat /etc/os-release
[2026-01-26 21:20:07] 2026-01-27 04:19:24,319 | INFO     | cat /etc/os-release:
[2026-01-26 21:20:07] NAME="CentOS Linux"
[2026-01-26 21:20:07] VERSION="7 (Core)"
[2026-01-26 21:20:07] ID="centos"
[2026-01-26 21:20:07] ID_LIKE="rhel fedora"
[2026-01-26 21:20:07] VERSION_ID="7"
[2026-01-26 21:20:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 21:20:07] ANSI_COLOR="0;31"
[2026-01-26 21:20:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 21:20:07] HOME_URL="https://www.centos.org/"
[2026-01-26 21:20:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 21:20:07] 
[2026-01-26 21:20:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 21:20:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 21:20:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 21:20:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 21:20:07] 
[2026-01-26 21:20:07] 2026-01-27 04:19:24,319 | INFO     | **************************************
[2026-01-26 21:20:07] 2026-01-27 04:19:24,821 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/13
[2026-01-26 21:20:07] 2026-01-27 04:19:24,833 | INFO     | sufficient remaining disk space (718447575040 B)
[2026-01-26 21:20:07] 2026-01-27 04:19:24,834 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 21:20:07] 2026-01-27 04:19:24,834 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 21:20:07] 2026-01-27 04:19:24,834 | INFO     | update_server=False
[2026-01-26 21:20:07] 2026-01-27 04:19:24,834 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 21:20:07] 2026-01-27 04:19:24,834 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 21:20:07] 2026-01-27 04:19:24,834 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 21:20:07] 2026-01-27 04:19:25,143 | INFO     | all payload control threads have been joined
[2026-01-26 21:20:07] 2026-01-27 04:19:25,238 | INFO     | all data control threads have been joined
[2026-01-26 21:20:07] 2026-01-27 04:19:25,448 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 21:20:07] 2026-01-27 04:19:25,448 | INFO     | aborting loop
[2026-01-26 21:20:07] 2026-01-27 04:19:25,519 | INFO     | all job control threads have been joined
[2026-01-26 21:20:07] 2026-01-27 04:19:25,838 | INFO     | [job] retrieve thread has finished
[2026-01-26 21:20:07] 2026-01-27 04:19:25,839 | INFO     | [job] queue monitor thread has finished
[2026-01-26 21:20:07] 2026-01-27 04:19:26,076 | INFO     | [payload] validate_post thread has finished
[2026-01-26 21:20:07] 2026-01-27 04:19:26,144 | INFO     | [payload] control thread has finished
[2026-01-26 21:20:07] 2026-01-27 04:19:26,240 | INFO     | [data] control thread has finished
[2026-01-26 21:20:07] 2026-01-27 04:19:26,415 | INFO     | [job] validate thread has finished
[2026-01-26 21:20:07] 2026-01-27 04:19:26,451 | INFO     | [job] job monitor thread has finished
[2026-01-26 21:20:07] 2026-01-27 04:19:26,480 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 21:20:07] 2026-01-27 04:19:26,524 | INFO     | [job] control thread has finished
[2026-01-26 21:20:07] 2026-01-27 04:19:26,570 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 21:20:07] 2026-01-27 04:19:26,644 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 21:20:07] 2026-01-27 04:19:26,839 | INFO     | [data] copytool_out thread has finished
[2026-01-26 21:20:07] 2026-01-27 04:19:26,859 | INFO     | [data] copytool_in thread has finished
[2026-01-26 21:20:07] 2026-01-27 04:19:27,073 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 21:20:07] 2026-01-27 04:19:27,078 | INFO     | [payload] failed_post thread has finished
[2026-01-26 21:20:07] 2026-01-27 04:19:27,784 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 21:20:07] 2026-01-27 04:19:31,785 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 21:20:07] 2026-01-27 04:19:54,561 | INFO     | 2794s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-26 21:20:07] 2026-01-27 04:19:55,663 | INFO     | PID=433687 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-26 21:20:07] 2026-01-27 04:19:55,663 | INFO     | .. there are 4 such processes running
[2026-01-26 21:20:07] 2026-01-27 04:19:55,663 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 21:20:07] 2026-01-27 04:19:55,663 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 21:20:07] 2026-01-27 04:19:55,663 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 21:20:07] 2026-01-27 04:20:01,262 | INFO     | [monitor] cgroup control has ended
[2026-01-26 21:20:07] 2026-01-27 04:20:02,507 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 130479253055296)>', '<ExcThread(monitor, started 130478970779392)>']
[2026-01-26 21:20:07] 2026-01-27 04:20:02,695 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 21:20:07] 2026-01-27 04:20:02,696 | INFO     | [monitor] control thread has ended
[2026-01-26 21:20:07] 2026-01-27 04:20:07,532 | INFO     | all workflow threads have been joined
[2026-01-26 21:20:07] 2026-01-27 04:20:07,533 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 21:20:07] 2026-01-27 04:20:07,533 | INFO     | traces error code: 0
[2026-01-26 21:20:07] 2026-01-27 04:20:07,533 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 21:20:07] 2026-01-27 04:20:07,603 [wrapper] ==== pilot stdout END ====
[2026-01-26 21:20:07] 2026-01-27 04:20:07,605 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 21:20:07] 2026-01-27 04:20:07,607 [wrapper] pilotpid: 433687
[2026-01-26 21:20:07] 2026-01-27 04:20:07,608 [wrapper] Pilot exit status: 0
[2026-01-26 21:20:07] 2026-01-27 04:20:07,615 [wrapper] pandaids: 6983771005
[2026-01-26 21:20:07] 2026-01-27 04:20:07,639 [wrapper] cleanup supervisor_pilot  470282 433688
[2026-01-26 21:20:07] 2026-01-27 04:20:07,640 [wrapper] Test setup, not cleaning
[2026-01-26 21:20:07] 2026-01-27 04:20:07,642 [wrapper] apfmon messages muted
[2026-01-26 21:20:07] 2026-01-27 04:20:07,644 [wrapper] ==== wrapper stdout END ====
[2026-01-26 21:20:07] 2026-01-27 04:20:07,646 [wrapper] ==== wrapper stderr END ====
[2026-01-26 21:20:07]  *** Error codes and diagnostics ***
[2026-01-26 21:20:07]     "exeErrorCode": 0,
[2026-01-26 21:20:07]     "exeErrorDiag": "",
[2026-01-26 21:20:07]     "pilotErrorCode": 0,
[2026-01-26 21:20:07]     "pilotErrorDiag": "",
[2026-01-26 21:20:07]  *** Listing of results directory ***
[2026-01-26 21:20:07] total 669156
[2026-01-26 21:20:07] -rw-r--r-- 1 boinc boinc      5111 Jan 25 18:12 queuedata.json
[2026-01-26 21:20:07] -rw-r--r-- 1 boinc boinc    584422 Jan 25 18:12 pilot3.tar.gz
[2026-01-26 21:20:07] -rwx------ 1 boinc boinc     36322 Jan 25 18:12 runpilot2-wrapper.sh
[2026-01-26 21:20:07] -rw-r--r-- 1 boinc boinc       100 Jan 26 20:32 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 21:20:07] -rwxr-xr-x 1 boinc boinc      7986 Jan 26 20:32 run_atlas
[2026-01-26 21:20:07] -rw-r--r-- 1 boinc boinc       105 Jan 26 20:32 job.xml
[2026-01-26 21:20:07] -rw-r--r-- 2 boinc boinc 498460037 Jan 26 20:32 EVNT.48318032._000056.pool.root.1
[2026-01-26 21:20:07] -rw-r--r-- 2 boinc boinc     15845 Jan 26 20:32 start_atlas.sh
[2026-01-26 21:20:07] drwxrwx--x 2 boinc boinc      4096 Jan 26 20:32 shared
[2026-01-26 21:20:07] -rw-r--r-- 2 boinc boinc    597765 Jan 26 20:32 input.tar.gz
[2026-01-26 21:20:07] -rw-r--r-- 1 boinc boinc      9473 Jan 26 20:32 init_data.xml
[2026-01-26 21:20:07] -rw-r--r-- 1 boinc boinc         0 Jan 26 20:32 boinc_setup_complete
[2026-01-26 21:20:07] -rw-r--r-- 1 boinc boinc         0 Jan 26 20:32 boinc_lockfile
[2026-01-26 21:20:07] -rw-r--r-- 1 boinc boinc      2532 Jan 26 20:32 pandaJob.out
[2026-01-26 21:20:07] -rw------- 1 boinc boinc   1006433 Jan 26 20:32 agis_schedconf.cvmfs.json
[2026-01-26 21:20:07] -rw------- 1 boinc boinc   1516246 Jan 26 20:32 agis_ddmendpoints.agis.ALL.json
[2026-01-26 21:20:07] -rw------- 1 boinc boinc       416 Jan 26 20:32 workernode_map.json
[2026-01-26 21:20:07] drwx------ 5 boinc boinc      4096 Jan 26 20:32 pilot3
[2026-01-26 21:20:07] -rw-r--r-- 1 boinc boinc       530 Jan 26 21:18 boinc_task_state.xml
[2026-01-26 21:20:07] -rw------- 1 boinc boinc 181304785 Jan 26 21:18 HITS.48318034._002125.pool.root.1
[2026-01-26 21:20:07] -rw------- 1 boinc boinc      1015 Jan 26 21:19 memory_monitor_summary.json
[2026-01-26 21:20:07] -rw------- 1 boinc boinc        95 Jan 26 21:19 pilot_heartbeat.json
[2026-01-26 21:20:07] -rw------- 1 boinc boinc    314365 Jan 26 21:19 log.48318034._002125.job.log.tgz.1
[2026-01-26 21:20:07] -rw------- 1 boinc boinc      6259 Jan 26 21:19 heartbeat.json
[2026-01-26 21:20:07] -rw-r--r-- 1 boinc boinc        27 Jan 26 21:20 wrapper_checkpoint.txt
[2026-01-26 21:20:07] -rw-r--r-- 1 boinc boinc      8192 Jan 26 21:20 boinc_mmap_file
[2026-01-26 21:20:07] -rw------- 1 boinc boinc      4942 Jan 26 21:20 pilotlog.txt
[2026-01-26 21:20:07] -rw------- 1 boinc boinc    440362 Jan 26 21:20 log.48318034._002125.job.log.1
[2026-01-26 21:20:07] -rw------- 1 boinc boinc       357 Jan 26 21:20 output.list
[2026-01-26 21:20:07] -rw-r--r-- 1 boinc boinc       620 Jan 26 21:20 runtime_log
[2026-01-26 21:20:07] -rw------- 1 boinc boinc    768000 Jan 26 21:20 result.tar.gz
[2026-01-26 21:20:07] -rw-r--r-- 1 boinc boinc      8929 Jan 26 21:20 runtime_log.err
[2026-01-26 21:20:07] -rw------- 1 boinc boinc       652 Jan 26 21:20 PfMNDmTKQ48n9Rq4apOajLDm4fhM0noT9bVo0NGKDme91KDmV3b87m.diag
[2026-01-26 21:20:07] -rw-r--r-- 1 boinc boinc     21717 Jan 26 21:20 stderr.txt
[2026-01-26 21:20:07] HITS file was successfully produced:
[2026-01-26 21:20:07] -rw------- 1 boinc boinc 181304785 Jan 26 21:18 shared/HITS.pool.root.1
[2026-01-26 21:20:07]  *** Contents of shared directory: ***
[2026-01-26 21:20:07] total 665196
[2026-01-26 21:20:07] -rw-r--r-- 2 boinc boinc 498460037 Jan 26 20:32 ATLAS.root_0
[2026-01-26 21:20:07] -rw-r--r-- 2 boinc boinc     15845 Jan 26 20:32 start_atlas.sh
[2026-01-26 21:20:07] -rw-r--r-- 2 boinc boinc    597765 Jan 26 20:32 input.tar.gz
[2026-01-26 21:20:07] -rw------- 1 boinc boinc 181304785 Jan 26 21:18 HITS.pool.root.1
[2026-01-26 21:20:07] -rw------- 1 boinc boinc    768000 Jan 26 21:20 result.tar.gz
21:20:09 (429585): run_atlas exited; CPU time 19476.883281
21:20:09 (429585): called boinc_finish(0)

</stderr_txt>
]]>

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