Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:16:21 (5155): wrapper (7.7.26015): starting
11:16:21 (5155): wrapper: running run_atlas (--nthreads 8)
[2026-01-27 11:16:21] Arguments: --nthreads 8
[2026-01-27 11:16:21] Threads: 8
[2026-01-27 11:16:21] Checking for CVMFS
[2026-01-27 11:16:22] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-27 11:16:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-27 11:16:23] Running cvmfs_config stat atlas.cern.ch
[2026-01-27 11:16:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-27 11:16:24] 2.11.2.0 29064 61185 128604 155581 1 93 22119229 25165825 1093 130560 0 21952485 99.846 14101876 3029 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-27 11:16:24] CVMFS is ok
[2026-01-27 11:16:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-27 11:16:24] Checking for apptainer binary...
[2026-01-27 11:16:24] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-27 11:16:24] Running /usr/bin/apptainer --version
[2026-01-27 11:16:24] apptainer version 1.3.2-1.el7
[2026-01-27 11:16:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-27 11:16:32] cg-vwn462.simple-grid.lan
[2026-01-27 11:16:32] apptainer works
[2026-01-27 11:16:32] Set ATHENA_PROC_NUMBER=8
[2026-01-27 11:16:32] Set ATHENA_CORE_NUMBER=8
[2026-01-27 11:16:32] Starting ATLAS job with PandaID=6983014688
[2026-01-27 11:16:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/21 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 14:46:09]  *** The last 200 lines of the pilot log: ***
[2026-01-27 14:46:09] 2026-01-27 13:45:30,576 | INFO     | extracted standard info from prmon json
[2026-01-27 14:46:09] 2026-01-27 13:45:30,576 | INFO     | extracted standard memory fields from prmon json
[2026-01-27 14:46:09] 2026-01-27 13:45:30,576 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-27 14:46:09] 2026-01-27 13:45:30,576 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-27 14:46:09] 2026-01-27 13:45:30,577 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-27 14:46:09] 2026-01-27 13:45:30,581 | INFO     | fitting pss+swap vs Time
[2026-01-27 14:46:09] 2026-01-27 13:45:30,581 | INFO     | sum of square deviations: 2299168690.0
[2026-01-27 14:46:09] 2026-01-27 13:45:30,583 | INFO     | sum of deviations: 53347858965.0
[2026-01-27 14:46:09] 2026-01-27 13:45:30,583 | INFO     | mean x: 1769515549.0
[2026-01-27 14:46:09] 2026-01-27 13:45:30,583 | INFO     | mean y: 2446535.317948718
[2026-01-27 14:46:09] 2026-01-27 13:45:30,583 | INFO     | intersect: -41055813502.32485
[2026-01-27 14:46:09] 2026-01-27 13:45:30,583 | INFO     | chi2: 7.736396575019061
[2026-01-27 14:46:09] 2026-01-27 13:45:30,584 | INFO     | sum of square deviations: 2126802667.5
[2026-01-27 14:46:09] 2026-01-27 13:45:30,585 | INFO     | sum of deviations: 64991189130.0
[2026-01-27 14:46:09] 2026-01-27 13:45:30,585 | INFO     | mean x: 1769515396.5
[2026-01-27 14:46:09] 2026-01-27 13:45:30,585 | INFO     | mean y: 2456598.863157895
[2026-01-27 14:46:09] 2026-01-27 13:45:30,586 | INFO     | intersect: -54070688766.12799
[2026-01-27 14:46:09] 2026-01-27 13:45:30,586 | INFO     | chi2: 7.054345667233404
[2026-01-27 14:46:09] 2026-01-27 13:45:30,586 | INFO     | current chi2=7.054345667233404 (change=8.816131659899767 %)
[2026-01-27 14:46:09] 2026-01-27 13:45:30,586 | INFO     | right removable region: 189
[2026-01-27 14:46:09] 2026-01-27 13:45:30,587 | INFO     | sum of square deviations: 2126802667.5
[2026-01-27 14:46:09] 2026-01-27 13:45:30,588 | INFO     | sum of deviations: -14380239796.00002
[2026-01-27 14:46:09] 2026-01-27 13:45:30,588 | INFO     | mean x: 1769515701.5
[2026-01-27 14:46:09] 2026-01-27 13:45:30,588 | INFO     | mean y: 2506412.9684210527
[2026-01-27 14:46:09] 2026-01-27 13:45:30,588 | INFO     | intersect: 11966973309.311163
[2026-01-27 14:46:09] 2026-01-27 13:45:30,593 | INFO     | chi2: 2.693135780095511
[2026-01-27 14:46:09] 2026-01-27 13:45:30,593 | INFO     | current chi2=2.693135780095511 (change=65.18875740171222 %)
[2026-01-27 14:46:09] 2026-01-27 13:45:30,593 | INFO     | sum of square deviations: 1963274020.0
[2026-01-27 14:46:09] 2026-01-27 13:45:30,595 | INFO     | sum of deviations: -50244023415.0
[2026-01-27 14:46:09] 2026-01-27 13:45:30,595 | INFO     | mean x: 1769515854.0
[2026-01-27 14:46:09] 2026-01-27 13:45:30,595 | INFO     | mean y: 2539595.4054054054
[2026-01-27 14:46:09] 2026-01-27 13:45:30,595 | INFO     | intersect: 45287912444.98333
[2026-01-27 14:46:09] 2026-01-27 13:45:30,596 | INFO     | chi2: 0.9751166297387588
[2026-01-27 14:46:09] 2026-01-27 13:45:30,596 | INFO     | current chi2=0.9751166297387588 (change=63.79251885680355 %)
[2026-01-27 14:46:09] 2026-01-27 13:45:30,596 | INFO     | sum of square deviations: 1808350185.0
[2026-01-27 14:46:09] 2026-01-27 13:45:30,597 | INFO     | sum of deviations: -46803154569.0
[2026-01-27 14:46:09] 2026-01-27 13:45:30,597 | INFO     | mean x: 1769516006.5
[2026-01-27 14:46:09] 2026-01-27 13:45:30,598 | INFO     | mean y: 2536166.2
[2026-01-27 14:46:09] 2026-01-27 13:45:30,598 | INFO     | intersect: 45800596658.8579
[2026-01-27 14:46:09] 2026-01-27 13:45:30,598 | INFO     | chi2: 0.964516202578734
[2026-01-27 14:46:09] 2026-01-27 13:45:30,598 | INFO     | current chi2=0.964516202578734 (change=1.0870932601020942 %)
[2026-01-27 14:46:09] 2026-01-27 13:45:30,598 | INFO     | left removable region: 30
[2026-01-27 14:46:09] 2026-01-27 13:45:30,599 | INFO     | sum of square deviations: 1246386160.0
[2026-01-27 14:46:09] 2026-01-27 13:45:30,600 | INFO     | sum of deviations: -15452255382.000004
[2026-01-27 14:46:09] 2026-01-27 13:45:30,600 | INFO     | mean x: 1769516281.0
[2026-01-27 14:46:09] 2026-01-27 13:45:30,600 | INFO     | mean y: 2528635.9056603773
[2026-01-27 14:46:09] 2026-01-27 13:45:30,600 | INFO     | intersect: 21940366485.949566
[2026-01-27 14:46:09] 2026-01-27 13:45:30,600 | INFO     | chi2: 0.11791866545898466
[2026-01-27 14:46:09] 2026-01-27 13:45:30,601 | INFO     | current memory leak: -12.40 B/s (using 159 data points, chi2=0.12)
[2026-01-27 14:46:09] 2026-01-27 13:45:30,601 | INFO     | could have reported an average CPU frequency of 2250 MHz (10 samples)
[2026-01-27 14:46:09] 2026-01-27 13:45:30,601 | INFO     | ..............................
[2026-01-27 14:46:09] 2026-01-27 13:45:30,602 | INFO     | . Timing measurements:
[2026-01-27 14:46:09] 2026-01-27 13:45:30,602 | INFO     | . get job = 0 s
[2026-01-27 14:46:09] 2026-01-27 13:45:30,602 | INFO     | . initial setup = 115 s
[2026-01-27 14:46:09] 2026-01-27 13:45:30,602 | INFO     | . payload setup = 149 s
[2026-01-27 14:46:09] 2026-01-27 13:45:30,602 | INFO     | . stage-in = 0 s
[2026-01-27 14:46:09] 2026-01-27 13:45:30,602 | INFO     | . payload execution = 12014 s
[2026-01-27 14:46:09] 2026-01-27 13:45:30,602 | INFO     | . stage-out = 3 s
[2026-01-27 14:46:09] 2026-01-27 13:45:30,602 | INFO     | . log creation = 1 s
[2026-01-27 14:46:09] 2026-01-27 13:45:30,602 | INFO     | ..............................
[2026-01-27 14:46:09] 2026-01-27 13:45:30,755 | INFO     | 
[2026-01-27 14:46:09] 2026-01-27 13:45:30,755 | INFO     | job summary report
[2026-01-27 14:46:09] 2026-01-27 13:45:30,755 | INFO     | --------------------------------------------------
[2026-01-27 14:46:09] 2026-01-27 13:45:30,755 | INFO     | PanDA job id: 6983014688
[2026-01-27 14:46:09] 2026-01-27 13:45:30,755 | INFO     | task id: 48317931
[2026-01-27 14:46:09] 2026-01-27 13:45:30,755 | INFO     | errors: (none)
[2026-01-27 14:46:09] 2026-01-27 13:45:30,755 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-27 14:46:09] 2026-01-27 13:45:30,755 | INFO     | pilot state: finished 
[2026-01-27 14:46:09] 2026-01-27 13:45:30,756 | INFO     | transexitcode: 0
[2026-01-27 14:46:09] 2026-01-27 13:45:30,756 | INFO     | exeerrorcode: 0
[2026-01-27 14:46:09] 2026-01-27 13:45:30,756 | INFO     | exeerrordiag: 
[2026-01-27 14:46:09] 2026-01-27 13:45:30,756 | INFO     | exitcode: 0
[2026-01-27 14:46:09] 2026-01-27 13:45:30,756 | INFO     | exitmsg: OK
[2026-01-27 14:46:09] 2026-01-27 13:45:30,756 | INFO     | cpuconsumptiontime: 52980 s
[2026-01-27 14:46:09] 2026-01-27 13:45:30,756 | INFO     | nevents: 400
[2026-01-27 14:46:09] 2026-01-27 13:45:30,756 | INFO     | neventsw: 0
[2026-01-27 14:46:09] 2026-01-27 13:45:30,756 | INFO     | pid: 13612
[2026-01-27 14:46:09] 2026-01-27 13:45:30,756 | INFO     | pgrp: 13612
[2026-01-27 14:46:09] 2026-01-27 13:45:30,757 | INFO     | corecount: 8
[2026-01-27 14:46:09] 2026-01-27 13:45:30,757 | INFO     | event service: False
[2026-01-27 14:46:09] 2026-01-27 13:45:30,757 | INFO     | sizes: {0: 2283740, 1: 2284201, 12: 2284201, 12168: 2313728, 12173: 2322922}
[2026-01-27 14:46:09] 2026-01-27 13:45:30,757 | INFO     | --------------------------------------------------
[2026-01-27 14:46:09] 2026-01-27 13:45:30,757 | INFO     | 
[2026-01-27 14:46:09] 2026-01-27 13:45:30,757 | INFO     | executing command: ls -lF /var/lib/boinc/slots/21
[2026-01-27 14:46:09] 2026-01-27 13:45:31,045 | INFO     | time since job start (12186s) is within the limit (349056.0s)
[2026-01-27 14:46:09] 2026-01-27 13:45:31,329 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-27 14:46:09] 2026-01-27 13:45:31,329 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-27 14:46:09] 2026-01-27 13:45:31,329 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-27 14:46:09] 2026-01-27 13:45:31,330 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-27 14:46:09] 2026-01-27 13:45:31,330 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-27 14:46:09] 2026-01-27 13:45:31,330 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-27 14:46:09] 2026-01-27 13:45:31,330 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-27 14:46:09] 2026-01-27 13:45:31,330 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-27 14:46:09] 2026-01-27 13:45:31,330 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-27 14:46:09] 2026-01-27 13:45:31,330 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-27 14:46:09] 2026-01-27 13:45:31,330 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-27 14:46:09] 2026-01-27 13:45:31,330 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-27 14:46:09] 2026-01-27 13:45:31,330 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-27 14:46:09] 2026-01-27 13:45:31,331 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-27 14:46:09] 2026-01-27 13:45:31,331 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-27 14:46:09] 2026-01-27 13:45:31,331 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-27 14:46:09] 2026-01-27 13:45:31,331 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-27 14:46:09] 2026-01-27 13:45:31,331 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-27 14:46:09] 2026-01-27 13:45:31,331 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-27 14:46:09] 2026-01-27 13:45:31,331 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-27 14:46:09] 2026-01-27 13:45:31,331 | INFO     | job 6983014688 has completed (purged errors)
[2026-01-27 14:46:09] 2026-01-27 13:45:31,331 | INFO     | overall cleanup function is called
[2026-01-27 14:46:09] 2026-01-27 13:45:32,340 | INFO     | --- collectZombieJob: --- 10, [13612]
[2026-01-27 14:46:09] 2026-01-27 13:45:32,340 | INFO     | zombie collector waiting for pid 13612
[2026-01-27 14:46:09] 2026-01-27 13:45:32,340 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 14:46:09] 2026-01-27 13:45:32,340 | INFO     | collected zombie processes
[2026-01-27 14:46:09] 2026-01-27 13:45:32,340 | INFO     | will attempt to kill all subprocesses of pid=13612
[2026-01-27 14:46:09] 2026-01-27 13:45:32,412 | INFO     | process IDs to be killed: [13612] (in reverse order)
[2026-01-27 14:46:09] 2026-01-27 13:45:33,354 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 14:46:09] 2026-01-27 13:45:33,355 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 14:46:09] 2026-01-27 13:45:33,357 | INFO     | did not find any defunct processes belonging to 13612
[2026-01-27 14:46:09] 2026-01-27 13:45:33,358 | INFO     | did not find any defunct processes belonging to 13612
[2026-01-27 14:46:09] 2026-01-27 13:45:33,358 | INFO     | ready for new job
[2026-01-27 14:46:09] 2026-01-27 13:45:33,358 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 14:46:09] 2026-01-27 13:45:33,360 | INFO     | **************************************
[2026-01-27 14:46:09] 2026-01-27 13:45:33,360 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 14:46:09] 2026-01-27 13:45:33,360 | INFO     | **************************************
[2026-01-27 14:46:09] 2026-01-27 13:45:33,360 | INFO     | 
[2026-01-27 14:46:09] 2026-01-27 13:45:33,361 | INFO     | pilot is running in a VM
[2026-01-27 14:46:09] 2026-01-27 13:45:33,361 | INFO     | architecture information:
[2026-01-27 14:46:09] 2026-01-27 13:45:33,368 | INFO     | executing command: cat /etc/os-release
[2026-01-27 14:46:09] 2026-01-27 13:45:33,620 | INFO     | cat /etc/os-release:
[2026-01-27 14:46:09] NAME="CentOS Linux"
[2026-01-27 14:46:09] VERSION="7 (Core)"
[2026-01-27 14:46:09] ID="centos"
[2026-01-27 14:46:09] ID_LIKE="rhel fedora"
[2026-01-27 14:46:09] VERSION_ID="7"
[2026-01-27 14:46:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 14:46:09] ANSI_COLOR="0;31"
[2026-01-27 14:46:09] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 14:46:09] HOME_URL="https://www.centos.org/"
[2026-01-27 14:46:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 14:46:09] 
[2026-01-27 14:46:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 14:46:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 14:46:09] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 14:46:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 14:46:09] 
[2026-01-27 14:46:09] 2026-01-27 13:45:33,620 | INFO     | **************************************
[2026-01-27 14:46:09] 2026-01-27 13:45:34,124 | INFO     | executing command: df -mP /var/lib/boinc/slots/21
[2026-01-27 14:46:09] 2026-01-27 13:45:34,414 | INFO     | sufficient remaining disk space (496502833152 B)
[2026-01-27 14:46:09] 2026-01-27 13:45:34,415 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 14:46:09] 2026-01-27 13:45:34,415 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 14:46:09] 2026-01-27 13:45:34,415 | INFO     | update_server=False
[2026-01-27 14:46:09] 2026-01-27 13:45:34,415 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 14:46:09] 2026-01-27 13:45:34,462 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-27 14:46:09] 2026-01-27 13:45:34,462 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-27 14:46:09] 2026-01-27 13:45:34,462 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 14:46:09] 2026-01-27 13:45:34,462 | INFO     | will abort loop
[2026-01-27 14:46:09] 2026-01-27 13:45:34,980 | INFO     | all data control threads have been joined
[2026-01-27 14:46:09] 2026-01-27 13:45:35,096 | INFO     | all job control threads have been joined
[2026-01-27 14:46:09] 2026-01-27 13:45:35,421 | INFO     | [job] retrieve thread has finished
[2026-01-27 14:46:09] 2026-01-27 13:45:35,424 | INFO     | [payload] failed_post thread has finished
[2026-01-27 14:46:09] 2026-01-27 13:45:35,468 | INFO     | [job] job monitor thread has finished
[2026-01-27 14:46:09] 2026-01-27 13:45:35,496 | INFO     | [job] validate thread has finished
[2026-01-27 14:46:09] 2026-01-27 13:45:35,496 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 14:46:09] 2026-01-27 13:45:35,598 | INFO     | all payload control threads have been joined
[2026-01-27 14:46:09] 2026-01-27 13:45:35,619 | INFO     | [data] copytool_in thread has finished
[2026-01-27 14:46:09] 2026-01-27 13:45:35,711 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 14:46:09] 2026-01-27 13:45:35,770 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 14:46:09] 2026-01-27 13:45:35,818 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 14:46:09] 2026-01-27 13:45:35,982 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 14:46:09] 2026-01-27 13:45:35,986 | INFO     | [data] control thread has finished
[2026-01-27 14:46:09] 2026-01-27 13:45:36,004 | INFO     | [payload] validate_post thread has finished
[2026-01-27 14:46:09] 2026-01-27 13:45:36,102 | INFO     | [job] control thread has finished
[2026-01-27 14:46:09] 2026-01-27 13:45:36,323 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 14:46:09] 2026-01-27 13:45:36,603 | INFO     | [payload] control thread has finished
[2026-01-27 14:46:09] 2026-01-27 13:45:36,609 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 14:46:09] 2026-01-27 13:45:36,776 | INFO     | [job] queue monitor thread has finished
[2026-01-27 14:46:09] 2026-01-27 13:45:37,718 | INFO     | [data] copytool_out thread has finished
[2026-01-27 14:46:09] 2026-01-27 13:45:40,332 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 14:46:09] 2026-01-27 13:45:45,024 | INFO     | [monitor] cgroup control has ended
[2026-01-27 14:46:09] 2026-01-27 13:45:46,168 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140334861436736)>', '<ExcThread(monitor, started 140334643103488)>']
[2026-01-27 14:46:09] 2026-01-27 13:45:51,194 | INFO     | all workflow threads have been joined
[2026-01-27 14:46:09] 2026-01-27 13:45:51,194 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 14:46:09] 2026-01-27 13:45:51,194 | INFO     | traces error code: 0
[2026-01-27 14:46:09] 2026-01-27 13:45:51,195 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 14:46:09] 2026-01-27 13:46:04,156 | INFO     | PID=9140 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-27 14:46:09] 2026-01-27 13:46:04,156 | INFO     | .. there are 2 such processes running
[2026-01-27 14:46:09] 2026-01-27 13:46:04,156 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 14:46:09] 2026-01-27 13:46:04,156 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 14:46:09] 2026-01-27 13:46:04,156 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 14:46:09] 2026-01-27 13:46:04,156 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 14:46:09] 2026-01-27 13:46:04,157 | CRITICAL | thread 'MainThread' is not alive
[2026-01-27 14:46:09] 2026-01-27 13:46:04,157 | INFO     | [monitor] control thread has ended
[2026-01-27 14:46:09] 2026-01-27 13:46:04,584 [wrapper] ==== pilot stdout END ====
[2026-01-27 14:46:09] 2026-01-27 13:46:04,663 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 14:46:09] 2026-01-27 13:46:04,762 [wrapper] pilotpid: 9140
[2026-01-27 14:46:09] 2026-01-27 13:46:04,901 [wrapper] Pilot exit status: 0
[2026-01-27 14:46:09] 2026-01-27 13:46:05,421 [wrapper] pandaids: 6983014688
[2026-01-27 14:46:09] 2026-01-27 13:46:06,525 [wrapper] cleanup supervisor_pilot  2453 9141
[2026-01-27 14:46:09] 2026-01-27 13:46:06,681 [wrapper] Test setup, not cleaning
[2026-01-27 14:46:09] 2026-01-27 13:46:06,796 [wrapper] apfmon messages muted
[2026-01-27 14:46:09] 2026-01-27 13:46:06,863 [wrapper] ==== wrapper stdout END ====
[2026-01-27 14:46:09] 2026-01-27 13:46:06,955 [wrapper] ==== wrapper stderr END ====
[2026-01-27 14:46:09]  *** Error codes and diagnostics ***
[2026-01-27 14:46:09]     "exeErrorCode": 0,
[2026-01-27 14:46:09]     "exeErrorDiag": "",
[2026-01-27 14:46:09]     "pilotErrorCode": 0,
[2026-01-27 14:46:09]     "pilotErrorDiag": "",
[2026-01-27 14:46:09]  *** Listing of results directory ***
[2026-01-27 14:46:09] total 675528
[2026-01-27 14:46:09] -rw-r--r--. 1 boinc boinc    584422 Jan 25 15:11 pilot3.tar.gz
[2026-01-27 14:46:09] -rwx------. 1 boinc boinc     36322 Jan 25 15:14 runpilot2-wrapper.sh
[2026-01-27 14:46:09] -rw-r--r--. 1 boinc boinc      5111 Jan 25 15:18 queuedata.json
[2026-01-27 14:46:09] -rw-r--r--. 1 boinc boinc       100 Jan 27 11:16 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 14:46:09] -rwxr-xr-x. 1 boinc boinc      7986 Jan 27 11:16 run_atlas
[2026-01-27 14:46:09] -rw-r--r--. 1 boinc boinc       105 Jan 27 11:16 job.xml
[2026-01-27 14:46:09] -rw-r--r--. 1 boinc boinc      6392 Jan 27 11:16 init_data.xml
[2026-01-27 14:46:09] -rw-r--r--. 2 boinc boinc 501229944 Jan 27 11:16 EVNT.48317929._000014.pool.root.1
[2026-01-27 14:46:09] -rw-r--r--. 2 boinc boinc     15845 Jan 27 11:16 start_atlas.sh
[2026-01-27 14:46:09] drwxrwx--x. 2 boinc boinc        68 Jan 27 11:16 shared
[2026-01-27 14:46:09] -rw-r--r--. 2 boinc boinc    597748 Jan 27 11:16 input.tar.gz
[2026-01-27 14:46:09] -rw-r--r--. 1 boinc boinc         0 Jan 27 11:16 boinc_lockfile
[2026-01-27 14:46:09] -rw-r--r--. 1 boinc boinc      2506 Jan 27 11:16 pandaJob.out
[2026-01-27 14:46:09] -rw-------. 1 boinc boinc       413 Jan 27 11:22 workernode_map.json
[2026-01-27 14:46:09] -rw-------. 1 boinc boinc   1002845 Jan 27 11:22 agis_schedconf.cvmfs.json
[2026-01-27 14:46:09] drwx------. 5 boinc boinc      4096 Jan 27 11:22 pilot3
[2026-01-27 14:46:09] -rw-------. 1 boinc boinc 182224846 Jan 27 14:43 HITS.48317931._000696.pool.root.1
[2026-01-27 14:46:09] -rw-r--r--. 1 boinc boinc       532 Jan 27 14:44 boinc_task_state.xml
[2026-01-27 14:46:09] -rw-------. 1 boinc boinc        95 Jan 27 14:45 pilot_heartbeat.json
[2026-01-27 14:46:09] -rw-------. 1 boinc boinc      1021 Jan 27 14:45 memory_monitor_summary.json
[2026-01-27 14:46:09] -rw-------. 1 boinc boinc   1516246 Jan 27 14:45 agis_ddmendpoints.agis.ALL.json
[2026-01-27 14:46:09] -rw-------. 1 boinc boinc    458892 Jan 27 14:45 log.48317931._000696.job.log.tgz.1
[2026-01-27 14:46:09] -rw-------. 1 boinc boinc      6328 Jan 27 14:45 heartbeat.json
[2026-01-27 14:46:09] -rw-r--r--. 1 boinc boinc        28 Jan 27 14:45 wrapper_checkpoint.txt
[2026-01-27 14:46:09] -rw-r--r--. 1 boinc boinc      8192 Jan 27 14:45 boinc_mmap_file
[2026-01-27 14:46:09] -rw-------. 1 boinc boinc       889 Jan 27 14:46 pilotlog.txt
[2026-01-27 14:46:09] -rw-------. 1 boinc boinc   1722522 Jan 27 14:46 log.48317931._000696.job.log.1
[2026-01-27 14:46:09] -rw-------. 1 boinc boinc       357 Jan 27 14:46 output.list
[2026-01-27 14:46:09] -rw-r--r--. 1 boinc boinc       620 Jan 27 14:46 runtime_log
[2026-01-27 14:46:09] -rw-------. 1 boinc boinc   2201600 Jan 27 14:46 result.tar.gz
[2026-01-27 14:46:09] -rw-r--r--. 1 boinc boinc      8832 Jan 27 14:46 runtime_log.err
[2026-01-27 14:46:09] -rw-------. 1 boinc boinc       654 Jan 27 14:46 4djKDmw3F48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmGn7KDmkVumBn.diag
[2026-01-27 14:46:09] -rw-r--r--. 1 boinc boinc     20605 Jan 27 14:46 stderr.txt
[2026-01-27 14:46:09] HITS file was successfully produced:
[2026-01-27 14:46:09] -rw-------. 1 boinc boinc 182224846 Jan 27 14:43 shared/HITS.pool.root.1
[2026-01-27 14:46:09]  *** Contents of shared directory: ***
[2026-01-27 14:46:09] total 670192
[2026-01-27 14:46:09] -rw-r--r--. 2 boinc boinc 501229944 Jan 27 11:16 ATLAS.root_0
[2026-01-27 14:46:09] -rw-r--r--. 2 boinc boinc     15845 Jan 27 11:16 start_atlas.sh
[2026-01-27 14:46:09] -rw-r--r--. 2 boinc boinc    597748 Jan 27 11:16 input.tar.gz
[2026-01-27 14:46:09] -rw-------. 1 boinc boinc 182224846 Jan 27 14:43 HITS.pool.root.1
[2026-01-27 14:46:09] -rw-------. 1 boinc boinc   2201600 Jan 27 14:46 result.tar.gz
14:46:10 (5155): run_atlas exited; CPU time 53091.765646
14:46:10 (5155): called boinc_finish(0)

</stderr_txt>
]]>

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