Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
14:01:49 (1749475): wrapper (7.7.26015): starting
14:01:49 (1749475): wrapper: running run_atlas (--nthreads 3)
[2026-01-27 14:01:49] Arguments: --nthreads 3
[2026-01-27 14:01:49] Threads: 3
[2026-01-27 14:01:49] Checking for CVMFS
[2026-01-27 14:01:50] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-27 14:01:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-27 14:01:50] Running cvmfs_config stat atlas.cern.ch
[2026-01-27 14:01:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-27 14:01:50] 2.9.2.0 2182370 9764 90076 155585 3 50 26605857 36864000 0 130560 0 4389497 99.986 316506 6597 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-27 14:01:50] CVMFS is ok
[2026-01-27 14:01:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-27 14:01:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-27 14:01:50] Further information can be found at the LHC@home message board.
[2026-01-27 14:01:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-27 14:01:50] Checking for apptainer binary...
[2026-01-27 14:01:50] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-27 14:01:50] Running /usr/bin/apptainer --version
[2026-01-27 14:01:50] apptainer version 1.4.1-1.1
[2026-01-27 14:01:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-27 14:01:50] atlasA303
[2026-01-27 14:01:50] apptainer works
[2026-01-27 14:01:50] Set ATHENA_PROC_NUMBER=3
[2026-01-27 14:01:50] Set ATHENA_CORE_NUMBER=3
[2026-01-27 14:01:50] Starting ATLAS job with PandaID=6984043548
[2026-01-27 14:01:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 15:26:12]  *** The last 200 lines of the pilot log: ***
[2026-01-27 15:26:12] 2026-01-27 14:25:41,217 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 15:26:12] 2026-01-27 14:25:41,217 | INFO     | collected zombie processes
[2026-01-27 15:26:12] 2026-01-27 14:25:41,217 | INFO     | will attempt to kill all subprocesses of pid=1758037
[2026-01-27 15:26:12] 2026-01-27 14:25:41,261 | INFO     | process IDs to be killed: [1758037] (in reverse order)
[2026-01-27 15:26:12] 2026-01-27 14:25:41,286 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 15:26:12] 2026-01-27 14:25:41,286 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 15:26:12] 2026-01-27 14:25:41,287 | INFO     | did not find any defunct processes belonging to 1758037
[2026-01-27 15:26:12] 2026-01-27 14:25:41,288 | INFO     | did not find any defunct processes belonging to 1758037
[2026-01-27 15:26:12] 2026-01-27 14:25:41,288 | INFO     | ready for new job
[2026-01-27 15:26:12] 2026-01-27 14:25:41,288 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 15:26:12] 2026-01-27 14:25:41,289 | INFO     | **************************************
[2026-01-27 15:26:12] 2026-01-27 14:25:41,289 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 15:26:12] 2026-01-27 14:25:41,289 | INFO     | **************************************
[2026-01-27 15:26:12] 2026-01-27 14:25:41,289 | INFO     | 
[2026-01-27 15:26:12] 2026-01-27 14:25:41,289 | INFO     | architecture information:
[2026-01-27 15:26:12] 2026-01-27 14:25:41,289 | INFO     | executing command: cat /etc/os-release
[2026-01-27 15:26:12] 2026-01-27 14:25:41,298 | INFO     | cat /etc/os-release:
[2026-01-27 15:26:12] NAME="CentOS Linux"
[2026-01-27 15:26:12] VERSION="7 (Core)"
[2026-01-27 15:26:12] ID="centos"
[2026-01-27 15:26:12] ID_LIKE="rhel fedora"
[2026-01-27 15:26:12] VERSION_ID="7"
[2026-01-27 15:26:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 15:26:12] ANSI_COLOR="0;31"
[2026-01-27 15:26:12] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 15:26:12] HOME_URL="https://www.centos.org/"
[2026-01-27 15:26:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 15:26:12] 
[2026-01-27 15:26:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 15:26:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 15:26:12] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 15:26:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 15:26:12] 
[2026-01-27 15:26:12] 2026-01-27 14:25:41,298 | INFO     | **************************************
[2026-01-27 15:26:12] 2026-01-27 14:25:41,801 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-27 15:26:12] 2026-01-27 14:25:41,814 | INFO     | sufficient remaining disk space (378002210816 B)
[2026-01-27 15:26:12] 2026-01-27 14:25:41,815 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 15:26:12] 2026-01-27 14:25:41,815 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 15:26:12] 2026-01-27 14:25:41,815 | INFO     | update_server=False
[2026-01-27 15:26:12] 2026-01-27 14:25:41,815 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 15:26:12] 2026-01-27 14:25:41,815 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 15:26:12] 2026-01-27 14:25:41,815 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 15:26:12] 2026-01-27 14:25:41,922 | INFO     | all payload control threads have been joined
[2026-01-27 15:26:12] 2026-01-27 14:25:41,929 | INFO     | all job control threads have been joined
[2026-01-27 15:26:12] 2026-01-27 14:25:42,596 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 15:26:12] 2026-01-27 14:25:42,596 | INFO     | aborting loop
[2026-01-27 15:26:12] 2026-01-27 14:25:42,734 | INFO     | all data control threads have been joined
[2026-01-27 15:26:12] 2026-01-27 14:25:42,821 | INFO     | [job] queue monitor thread has finished
[2026-01-27 15:26:12] 2026-01-27 14:25:42,821 | INFO     | [job] retrieve thread has finished
[2026-01-27 15:26:12] 2026-01-27 14:25:42,928 | INFO     | [payload] control thread has finished
[2026-01-27 15:26:12] 2026-01-27 14:25:42,934 | INFO     | [job] control thread has finished
[2026-01-27 15:26:12] 2026-01-27 14:25:42,985 | INFO     | [payload] validate_post thread has finished
[2026-01-27 15:26:12] 2026-01-27 14:25:43,411 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 15:26:12] 2026-01-27 14:25:43,601 | INFO     | [job] job monitor thread has finished
[2026-01-27 15:26:12] 2026-01-27 14:25:43,687 | INFO     | [job] validate thread has finished
[2026-01-27 15:26:12] 2026-01-27 14:25:43,725 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 15:26:12] 2026-01-27 14:25:43,740 | INFO     | [data] control thread has finished
[2026-01-27 15:26:12] 2026-01-27 14:25:43,814 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 15:26:12] 2026-01-27 14:25:43,821 | INFO     | [data] copytool_out thread has finished
[2026-01-27 15:26:12] 2026-01-27 14:25:43,843 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 15:26:12] 2026-01-27 14:25:43,946 | INFO     | [data] copytool_in thread has finished
[2026-01-27 15:26:12] 2026-01-27 14:25:44,067 | INFO     | [payload] failed_post thread has finished
[2026-01-27 15:26:12] 2026-01-27 14:25:44,678 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 15:26:12] 2026-01-27 14:25:48,685 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 15:26:12] 2026-01-27 14:26:05,239 | INFO     | [monitor] cgroup control has ended
[2026-01-27 15:26:12] 2026-01-27 14:26:05,774 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140619866593088)>', '<ExcThread(monitor, started 140619242534656)>']
[2026-01-27 15:26:12] 2026-01-27 14:26:10,787 | INFO     | all workflow threads have been joined
[2026-01-27 15:26:12] 2026-01-27 14:26:10,788 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 15:26:12] 2026-01-27 14:26:10,788 | INFO     | traces error code: 0
[2026-01-27 15:26:12] 2026-01-27 14:26:10,788 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 15:26:12] 2026-01-27 14:26:12,386 | INFO     | PID=1753545 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-27 15:26:12] 2026-01-27 14:26:12,386 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 15:26:12] 2026-01-27 14:26:12,386 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 15:26:12] 2026-01-27 14:26:12,386 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 15:26:12] 2026-01-27 14:26:12,386 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 15:26:12] 2026-01-27 14:26:12,386 | INFO     | [monitor] control thread has ended
[2026-01-27 15:26:12] 2026-01-27 14:26:12,434 [wrapper] ==== pilot stdout END ====
[2026-01-27 15:26:12] 2026-01-27 14:26:12,436 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 15:26:12] 2026-01-27 14:26:12,438 [wrapper] pilotpid: 1753545
[2026-01-27 15:26:12] 2026-01-27 14:26:12,441 [wrapper] Pilot exit status: 0
[2026-01-27 15:26:12] 2026-01-27 14:26:12,448 [wrapper] pandaids: 6984043548
[2026-01-27 15:26:12] 2026-01-27 14:26:12,464 [wrapper] cleanup supervisor_pilot 1780257 1753546
[2026-01-27 15:26:12] 2026-01-27 14:26:12,466 [wrapper] Test setup, not cleaning
[2026-01-27 15:26:12] 2026-01-27 14:26:12,469 [wrapper] apfmon messages muted
[2026-01-27 15:26:12] 2026-01-27 14:26:12,471 [wrapper] ==== wrapper stdout END ====
[2026-01-27 15:26:12] 2026-01-27 14:26:12,473 [wrapper] ==== wrapper stderr END ====
[2026-01-27 15:26:12]  *** Error codes and diagnostics ***
[2026-01-27 15:26:12]     "exeErrorCode": 0,
[2026-01-27 15:26:12]     "exeErrorDiag": "",
[2026-01-27 15:26:12]     "pilotErrorCode": 0,
[2026-01-27 15:26:12]     "pilotErrorDiag": "",
[2026-01-27 15:26:12]  *** Listing of results directory ***
[2026-01-27 15:26:12] total 678440
[2026-01-27 15:26:12] -rw-r--r-- 1 boinc boinc    621528 Jan 14 12:27 pilot3.tar.gz
[2026-01-27 15:26:12] -rw-r--r-- 1 boinc boinc      5111 Jan 26 06:14 queuedata.json
[2026-01-27 15:26:12] -rwx------ 1 boinc boinc     36322 Jan 26 06:14 runpilot2-wrapper.sh
[2026-01-27 15:26:12] -rw-r--r-- 1 boinc boinc       100 Jan 27 14:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 15:26:12] -rwxr-xr-x 1 boinc boinc      7986 Jan 27 14:01 run_atlas
[2026-01-27 15:26:12] -rw-r--r-- 1 boinc boinc       105 Jan 27 14:01 job.xml
[2026-01-27 15:26:12] -rw-r--r-- 2 boinc boinc 501744149 Jan 27 14:01 EVNT.48310721._000051.pool.root.1
[2026-01-27 15:26:12] -rw-r--r-- 2 boinc boinc    634122 Jan 27 14:01 input.tar.gz
[2026-01-27 15:26:12] -rw-r--r-- 2 boinc boinc     15845 Jan 27 14:01 start_atlas.sh
[2026-01-27 15:26:12] drwxrwx--x 2 boinc boinc      4096 Jan 27 14:01 shared
[2026-01-27 15:26:12] -rw-r--r-- 1 boinc boinc         0 Jan 27 14:01 boinc_setup_complete
[2026-01-27 15:26:12] -rw-r--r-- 1 boinc boinc      6447 Jan 27 14:01 init_data.xml
[2026-01-27 15:26:12] -rw-r--r-- 1 boinc boinc         0 Jan 27 14:01 boinc_lockfile
[2026-01-27 15:26:12] -rw-r--r-- 1 boinc boinc      2534 Jan 27 14:01 pandaJob.out
[2026-01-27 15:26:12] -rw------- 1 boinc boinc   1002845 Jan 27 14:01 agis_schedconf.cvmfs.json
[2026-01-27 15:26:12] -rw------- 1 boinc boinc   1516246 Jan 27 14:01 agis_ddmendpoints.agis.ALL.json
[2026-01-27 15:26:12] -rw------- 1 boinc boinc       425 Jan 27 14:01 workernode_map.json
[2026-01-27 15:26:12] drwx------ 5 boinc boinc      4096 Jan 27 14:01 pilot3
[2026-01-27 15:26:12] -rw------- 1 boinc boinc 186902334 Jan 27 15:25 HITS.48310724._010445.pool.root.1
[2026-01-27 15:26:12] -rw------- 1 boinc boinc        95 Jan 27 15:25 pilot_heartbeat.json
[2026-01-27 15:26:12] -rw-r--r-- 1 boinc boinc       530 Jan 27 15:25 boinc_task_state.xml
[2026-01-27 15:26:12] -rw------- 1 boinc boinc      1014 Jan 27 15:25 memory_monitor_summary.json
[2026-01-27 15:26:12] -rw------- 1 boinc boinc    279103 Jan 27 15:25 log.48310724._010445.job.log.tgz.1
[2026-01-27 15:26:12] -rw------- 1 boinc boinc      6302 Jan 27 15:25 heartbeat.json
[2026-01-27 15:26:12] -rw-r--r-- 1 boinc boinc      8192 Jan 27 15:26 boinc_mmap_file
[2026-01-27 15:26:12] -rw-r--r-- 1 boinc boinc        27 Jan 27 15:26 wrapper_checkpoint.txt
[2026-01-27 15:26:12] -rw------- 1 boinc boinc       747 Jan 27 15:26 pilotlog.txt
[2026-01-27 15:26:12] -rw------- 1 boinc boinc    762005 Jan 27 15:26 log.48310724._010445.job.log.1
[2026-01-27 15:26:12] -rw------- 1 boinc boinc       357 Jan 27 15:26 output.list
[2026-01-27 15:26:12] -rw-r--r-- 1 boinc boinc       620 Jan 27 15:26 runtime_log
[2026-01-27 15:26:12] -rw------- 1 boinc boinc   1054720 Jan 27 15:26 result.tar.gz
[2026-01-27 15:26:12] -rw-r--r-- 1 boinc boinc      8911 Jan 27 15:26 runtime_log.err
[2026-01-27 15:26:12] -rw------- 1 boinc boinc       660 Jan 27 15:26 A3CLDm96T48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmgW2KDm9WLAKo.diag
[2026-01-27 15:26:12] -rw-r--r-- 1 boinc boinc     10414 Jan 27 15:26 stderr.txt
[2026-01-27 15:26:12] HITS file was successfully produced:
[2026-01-27 15:26:12] -rw------- 1 boinc boinc 186902334 Jan 27 15:25 shared/HITS.pool.root.1
[2026-01-27 15:26:12]  *** Contents of shared directory: ***
[2026-01-27 15:26:12] total 674188
[2026-01-27 15:26:12] -rw-r--r-- 2 boinc boinc 501744149 Jan 27 14:01 ATLAS.root_0
[2026-01-27 15:26:12] -rw-r--r-- 2 boinc boinc    634122 Jan 27 14:01 input.tar.gz
[2026-01-27 15:26:12] -rw-r--r-- 2 boinc boinc     15845 Jan 27 14:01 start_atlas.sh
[2026-01-27 15:26:12] -rw------- 1 boinc boinc 186902334 Jan 27 15:25 HITS.pool.root.1
[2026-01-27 15:26:12] -rw------- 1 boinc boinc   1054720 Jan 27 15:26 result.tar.gz
15:26:14 (1749475): run_atlas exited; CPU time 14318.912864
15:26:14 (1749475): called boinc_finish(0)

</stderr_txt>
]]>

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