Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2026-01-27 13:03:47 (4828): vboxwrapper version 26210
2026-01-27 13:03:47 (4828): BOINC client version: 8.0.2
2026-01-27 13:03:48 (4828): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2026-01-27 13:03:48 (4828): Successfully copied 'init_data.xml' to the shared directory.
2026-01-27 13:03:48 (4828): Create VM. (boinc_a1f0355904de78e1, slot#5)
2026-01-27 13:03:49 (4828): Setting Memory Size for VM. (4800MB)
2026-01-27 13:03:49 (4828): Setting CPU Count for VM. (8)
2026-01-27 13:03:49 (4828): Setting Chipset Options for VM.
2026-01-27 13:03:50 (4828): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-01-27 13:03:50 (4828): Setting Boot Options for VM.
2026-01-27 13:03:50 (4828): Setting Network Configuration for NAT. (Driver: virtio)
2026-01-27 13:03:51 (4828): Enabling VM Network Access.
2026-01-27 13:03:51 (4828): Disabling USB Support for VM.
2026-01-27 13:03:51 (4828): Disabling COM Port Support for VM.
2026-01-27 13:03:51 (4828): Disabling LPT Port Support for VM.
2026-01-27 13:03:52 (4828): Disabling Audio Support for VM.
2026-01-27 13:03:52 (4828): Disabling Clipboard Support for VM.
2026-01-27 13:03:52 (4828): Disabling Drag and Drop Support for VM.
2026-01-27 13:03:52 (4828): Adding storage controller(s) to VM.
2026-01-27 13:03:53 (4828): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-01-27 13:03:53 (4828): Adding VirtualBox Guest Additions to VM.
2026-01-27 13:03:53 (4828): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-01-27 13:03:54 (4828): forwarding host port 64717 to guest port 80
2026-01-27 13:03:54 (4828): Enabling remote desktop for VM.
2026-01-27 13:03:54 (4828): Required extension pack not installed, remote desktop not enabled.
2026-01-27 13:03:54 (4828): Enabling shared directory for VM.
2026-01-27 13:03:55 (4828): Starting VM using VBoxManage interface. (boinc_a1f0355904de78e1, slot#5)
2026-01-27 13:04:04 (4828): Successfully started VM. (PID = '14456')
2026-01-27 13:04:04 (4828): Reporting VM Process ID to BOINC.
2026-01-27 13:04:04 (4828): Guest Log: BIOS: VirtualBox 7.0.6
2026-01-27 13:04:04 (4828): Guest Log: CPUID EDX: 0x178bfbff
2026-01-27 13:04:04 (4828): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-01-27 13:04:04 (4828): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-01-27 13:04:04 (4828): VM state change detected. (old = 'poweredoff', new = 'running')
2026-01-27 13:04:04 (4828): Detected: Web Application Enabled (http://localhost:64717)
2026-01-27 13:04:04 (4828): Preference change detected
2026-01-27 13:04:04 (4828): Setting CPU throttle for VM. (90%)
2026-01-27 13:04:04 (4828): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-01-27 13:04:06 (4828): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-01-27 13:04:06 (4828): Guest Log: BIOS: Booting from Hard Disk...
2026-01-27 13:04:09 (4828): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-01-27 13:04:09 (4828): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-01-27 13:04:09 (4828): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-01-27 13:04:09 (4828): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-01-27 13:04:09 (4828): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-01-27 13:04:09 (4828): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-01-27 13:04:09 (4828): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-01-27 13:04:09 (4828): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-01-27 13:04:09 (4828): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-01-27 13:04:09 (4828): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-01-27 13:04:09 (4828): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-01-27 13:04:09 (4828): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-01-27 13:04:09 (4828): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-01-27 13:04:09 (4828): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-01-27 13:04:09 (4828): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-01-27 13:04:09 (4828): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-01-27 13:04:09 (4828): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-01-27 13:04:09 (4828): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-01-27 13:04:09 (4828): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-01-27 13:04:09 (4828): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-01-27 13:04:09 (4828): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-01-27 13:04:09 (4828): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-01-27 13:04:09 (4828): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-01-27 13:04:09 (4828): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-01-27 13:04:09 (4828): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-01-27 13:04:09 (4828): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-01-27 13:04:09 (4828): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-01-27 13:04:09 (4828): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-01-27 13:04:09 (4828): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-01-27 13:04:09 (4828): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-01-27 13:04:09 (4828): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-01-27 13:04:09 (4828): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-01-27 13:04:18 (4828): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-01-27 13:04:18 (4828): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-01-27 13:04:33 (4828): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-01-27 13:04:33 (4828): Guest Log: 00:00:00.000294 main     Log opened 2026-01-27T13:04:31.549777000Z
2026-01-27 13:04:33 (4828): Guest Log: 00:00:00.000579 main     OS Product: Linux
2026-01-27 13:04:33 (4828): Guest Log: 00:00:00.000653 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-01-27 13:04:33 (4828): Guest Log: 00:00:00.000724 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-01-27 13:04:33 (4828): Guest Log: 00:00:00.000852 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-01-27 13:04:33 (4828): Guest Log: 00:00:00.000854 main     Process ID: 1375
2026-01-27 13:04:33 (4828): Guest Log: 00:00:00.000855 main     Package type: LINUX_64BITS_GENERIC
2026-01-27 13:04:33 (4828): Guest Log: 00:00:00.002621 main     5.2.32 r132073 started. Verbose level = 0
2026-01-27 13:04:33 (4828): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-01-27 13:04:33 (4828): Guest Log: [INFO] Mounting shared directory
2026-01-27 13:04:33 (4828): Guest Log: [INFO] Checking for init_data.xml
2026-01-27 13:04:43 (4828): Guest Log: 00:00:10.041577 timesync vgsvcTimeSyncWorker: Radical guest time change: -39 588 962 359 000ns (GuestNow=1 769 479 482 593 815 000 ns GuestLast=1 769 519 071 556 174 000 ns fSetTimeLastLoop=true )
2026-01-27 13:05:00 (4828): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-01-27 13:05:00 (4828): Guest Log: [INFO] Detected branch: prod
2026-01-27 13:05:01 (4828): Guest Log: This is the prod version of the ATLAS job wrapper
2026-01-27 13:05:01 (4828): Guest Log: Copying input files
2026-01-27 13:05:04 (4828): Guest Log: Copied input files into RunAtlas.
2026-01-27 13:05:04 (4828): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-01-27 13:05:04 (4828): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-01-27 13:05:04 (4828): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-01-27 13:05:04 (4828): Guest Log: Further information can be found at the LHC@home message board.
2026-01-27 13:05:22 (4828): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-01-27 13:05:24 (4828): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-01-27 13:05:24 (4828): Guest Log: 2.6.3.0 1656 0 30164 155568 3 1 3117739 4096000 0 65024 0 0 n/a 0 0 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-01-27 13:05:27 (4828): Guest Log: copied the webapp to /var/www
2026-01-27 13:05:27 (4828): Guest Log: ATHENA_PROC_NUMBER=8
2026-01-27 13:05:27 (4828): Guest Log: ATHENA_CORE_NUMBER=8
2026-01-27 13:05:28 (4828): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-01-27 13:05:28 (4828): Guest Log:  *** Starting ATLAS job. (PandaID=6981168914 taskID=48312962) ***
2026-01-27 14:44:07 (4828): Status Report: Elapsed Time: '6000.000000'
2026-01-27 14:44:07 (4828): Status Report: CPU Time: '33084.078125'
2026-01-27 16:24:10 (4828): Status Report: Elapsed Time: '12000.000000'
2026-01-27 16:24:10 (4828): Status Report: CPU Time: '75709.781250'
2026-01-27 18:04:14 (4828): Status Report: Elapsed Time: '18000.000000'
2026-01-27 18:04:14 (4828): Status Report: CPU Time: '118035.234375'
2026-01-27 19:44:17 (4828): Status Report: Elapsed Time: '24000.000000'
2026-01-27 19:44:17 (4828): Status Report: CPU Time: '160578.500000'
2026-01-27 20:43:02 (4828): Guest Log:  *** Job finished ***
2026-01-27 20:43:02 (4828): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-01-27 20:43:02 (4828): Guest Log: 2026-01-27 09:42:39,643 | INFO     | all workflow threads have been joined
2026-01-27 20:43:02 (4828): Guest Log: 2026-01-27 09:42:39,644 | INFO     | end of generic workflow (traces error code: 0)
2026-01-27 20:43:02 (4828): Guest Log: 2026-01-27 09:42:39,644 | INFO     | traces error code: 0
2026-01-27 20:43:02 (4828): Guest Log: 2026-01-27 09:42:39,644 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-01-27 20:43:02 (4828): Guest Log: 2026-01-27 09:42:58,350 | INFO     | PID=6120 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-01-27 20:43:02 (4828): Guest Log: 2026-01-27 09:42:58,351 | INFO     | found 0 job(s) in 20 queues
2026-01-27 20:43:02 (4828): Guest Log: 2026-01-27 09:42:58,351 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-01-27 20:43:02 (4828): Guest Log: 2026-01-27 09:42:58,351 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-01-27 20:43:02 (4828): Guest Log: 2026-01-27 09:42:58,351 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-01-27 20:43:02 (4828): Guest Log: 2026-01-27 09:42:58,352 | INFO     | [monitor] control thread has ended
2026-01-27 20:43:02 (4828): Guest Log: 2026-01-27 09:42:58,596 [wrapper] ==== pilot stdout END ====
2026-01-27 20:43:02 (4828): Guest Log: 2026-01-27 09:42:58,605 [wrapper] ==== wrapper stdout RESUME ====
2026-01-27 20:43:02 (4828): Guest Log: 2026-01-27 09:42:58,615 [wrapper] pilotpid: 6120
2026-01-27 20:43:02 (4828): Guest Log: 2026-01-27 09:42:58,626 [wrapper] Pilot exit status: 0
2026-01-27 20:43:02 (4828): Guest Log: 2026-01-27 09:42:58,711 [wrapper] pandaids: 6981168914
2026-01-27 20:43:02 (4828): Guest Log: 2026-01-27 09:42:58,766 [wrapper] cleanup supervisor_pilot 31323 6121
2026-01-27 20:43:02 (4828): Guest Log: 2026-01-27 09:42:58,785 [wrapper] Test setup, not cleaning
2026-01-27 20:43:02 (4828): Guest Log: 2026-01-27 09:42:58,795 [wrapper] apfmon messages muted
2026-01-27 20:43:02 (4828): Guest Log: 2026-01-27 09:42:58,804 [wrapper] ==== wrapper stdout END ====
2026-01-27 20:43:02 (4828): Guest Log: 2026-01-27 09:42:58,813 [wrapper] ==== wrapper stderr END ====
2026-01-27 20:43:02 (4828): Guest Log:  *** Error codes and diagnostics ***
2026-01-27 20:43:02 (4828): Guest Log:     "exeErrorCode": 0,
2026-01-27 20:43:02 (4828): Guest Log:     "exeErrorDiag": "",
2026-01-27 20:43:02 (4828): Guest Log:     "pilotErrorCode": 0,
2026-01-27 20:43:02 (4828): Guest Log:     "pilotErrorDiag": "",
2026-01-27 20:43:02 (4828): Guest Log:  *** Listing of results directory ***
2026-01-27 20:43:02 (4828): Guest Log: total 320592
2026-01-27 20:43:02 (4828): Guest Log: -rwx------. 1 atlas atlas     36322 Jan 23 09:46 runpilot2-wrapper.sh
2026-01-27 20:43:02 (4828): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Jan 23 09:46 queuedata.json
2026-01-27 20:43:02 (4828): Guest Log: -rw-r--r--. 1 atlas atlas    584422 Jan 23 09:46 pilot3.tar.gz
2026-01-27 20:43:02 (4828): Guest Log: -rwxr-xr-x. 1 atlas atlas      9121 Jan 27 02:05 init_data.xml
2026-01-27 20:43:02 (4828): Guest Log: -rwxr-xr-x. 1 atlas atlas    597775 Jan 27 02:05 input.tar.gz
2026-01-27 20:43:02 (4828): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Jan 27 02:05 start_atlas.sh
2026-01-27 20:43:02 (4828): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jan 27 02:05 EVNT.48312960._000013.pool.root.1 -> /data/./ATLAS.root_0
2026-01-27 20:43:02 (4828): Guest Log: -rw-r--r--. 1 atlas atlas      2625 Jan 27 02:05 pandaJob.out
2026-01-27 20:43:02 (4828): Guest Log: -rw-------. 1 atlas atlas   1006441 Jan 27 02:07 agis_schedconf.cvmfs.json
2026-01-27 20:43:02 (4828): Guest Log: -rw-------. 1 atlas atlas       435 Jan 27 02:07 workernode_map.json
2026-01-27 20:43:02 (4828): Guest Log: drwx------. 5 atlas atlas      4096 Jan 27 02:08 pilot3
2026-01-27 20:43:02 (4828): Guest Log: -rw-------. 1 atlas atlas 315651945 Jan 27 09:41 HITS.48312962._000388.pool.root.1
2026-01-27 20:43:02 (4828): Guest Log: -rw-------. 1 atlas atlas      1040 Jan 27 09:42 memory_monitor_summary.json
2026-01-27 20:43:02 (4828): Guest Log: -rw-------. 1 atlas atlas        95 Jan 27 09:42 pilot_heartbeat.json
2026-01-27 20:43:02 (4828): Guest Log: -rw-------. 1 atlas atlas   1516246 Jan 27 09:42 agis_ddmendpoints.agis.ALL.json
2026-01-27 20:43:02 (4828): Guest Log: -rw-------. 1 atlas atlas    687991 Jan 27 09:42 log.48312962._000388.job.log.tgz.1
2026-01-27 20:43:02 (4828): Guest Log: -rw-------. 1 atlas atlas      6405 Jan 27 09:42 heartbeat.json
2026-01-27 20:43:02 (4828): Guest Log: -rw-------. 1 atlas atlas       744 Jan 27 09:42 pilotlog.txt
2026-01-27 20:43:02 (4828): Guest Log: -rw-------. 1 atlas atlas   3695872 Jan 27 09:42 log.48312962._000388.job.log.1
2026-01-27 20:43:02 (4828): Guest Log: -rw-------. 1 atlas atlas       357 Jan 27 09:42 output.list
2026-01-27 20:43:02 (4828): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jan 27 09:42 runtime_log
2026-01-27 20:43:02 (4828): Guest Log: -rw-------. 1 atlas atlas   4403200 Jan 27 09:42 result.tar.gz
2026-01-27 20:43:02 (4828): Guest Log: -rw-------. 1 atlas atlas       663 Jan 27 09:42 VuOODm1uS38n9Rq4apOajLDm4fhM0noT9bVo0NGKDmzgvKDmRUCMGn.diag
2026-01-27 20:43:02 (4828): Guest Log: -rw-r--r--. 1 atlas atlas      8764 Jan 27 09:42 runtime_log.err
2026-01-27 20:43:02 (4828): Guest Log: Looking for outputfile HITS.48312962._000388.pool.root.1
2026-01-27 20:43:02 (4828): Guest Log: HITS file was successfully produced
2026-01-27 20:43:02 (4828): Guest Log: -rw-------. 1 atlas atlas 315651945 Jan 27 09:41 /home/atlas/RunAtlas/HITS.48312962._000388.pool.root.1
2026-01-27 20:43:06 (4828): Guest Log: Successfully finished the ATLAS job!
2026-01-27 20:43:06 (4828): Guest Log: Copying the results back to the shared directory!
2026-01-27 20:43:06 (4828): Guest Log:  *** Contents of shared directory: ***
2026-01-27 20:43:06 (4828): Guest Log: total 628056
2026-01-27 20:43:06 (4828): Guest Log: -rwxrwxrwx. 1 root root 322441499 Jan 27 02:03 ATLAS.root_0
2026-01-27 20:43:06 (4828): Guest Log: -rwxrwxrwx. 1 root root 315651945 Jan 27 09:43 HITS.pool.root.1
2026-01-27 20:43:06 (4828): Guest Log: -rwxrwxrwx. 1 root root      9121 Jan 27 02:03 init_data.xml
2026-01-27 20:43:06 (4828): Guest Log: -rwxrwxrwx. 1 root root    597775 Jan 27 01:59 input.tar.gz
2026-01-27 20:43:06 (4828): Guest Log: -rwxrwxrwx. 1 root root   4403200 Jan 27 09:43 result.tar.gz
2026-01-27 20:43:06 (4828): Guest Log: -rwxrwxrwx. 1 root root     15845 Jan 27 01:59 start_atlas.sh
2026-01-27 20:43:06 (4828): Guest Log:  *** Success! Shutting down the machine. ***
2026-01-27 20:43:06 (4828): VM Completion File Detected.
2026-01-27 20:43:06 (4828): Powering off VM.
2026-01-27 20:43:06 (4828): Successfully stopped VM.
2026-01-27 20:43:06 (4828): Deregistering VM. (boinc_a1f0355904de78e1, slot#5)
2026-01-27 20:43:07 (4828): Removing network bandwidth throttle group from VM.
2026-01-27 20:43:07 (4828): Removing VM from VirtualBox.
2026-01-27 20:43:12 (4828): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN