Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:52:18 (3985915): wrapper (7.7.26015): starting
06:52:18 (3985915): wrapper: running run_atlas (--nthreads 4)
[2026-01-27 06:52:18] Arguments: --nthreads 4
[2026-01-27 06:52:18] Threads: 4
[2026-01-27 06:52:18] Checking for CVMFS
[2026-01-27 06:52:18] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-27 06:52:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-27 06:52:19] Running cvmfs_config stat atlas.cern.ch
[2026-01-27 06:52:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-27 06:52:19] 2.13.3.0 6033 95953 86124 155574 1 50 2827608 4097025 0 130560 3 21495959 99.863 4900186 5788 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2026-01-27 06:52:19] CVMFS is ok
[2026-01-27 06:52:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-27 06:52:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-27 06:52:19] Further information can be found at the LHC@home message board.
[2026-01-27 06:52:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-27 06:52:19] Checking for apptainer binary...
[2026-01-27 06:52:19] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/var/lib/snapd/snap/bin)
[2026-01-27 06:52:19] apptainer is not installed, using version from CVMFS
[2026-01-27 06:52:19] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-27 06:52:21] pckeatlas07
[2026-01-27 06:52:21] apptainer works
[2026-01-27 06:52:21] Set ATHENA_PROC_NUMBER=4
[2026-01-27 06:52:21] Set ATHENA_CORE_NUMBER=4
[2026-01-27 06:52:21] Starting ATLAS job with PandaID=6984061842
[2026-01-27 06:52:21] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 09:01:57]  *** The last 200 lines of the pilot log: ***
[2026-01-27 09:01:57] 2026-01-27 08:01:31,445 | INFO     | sum of deviations: -20453602316.0
[2026-01-27 09:01:57] 2026-01-27 08:01:31,445 | INFO     | mean x: 1769497026.0
[2026-01-27 09:01:57] 2026-01-27 08:01:31,445 | INFO     | mean y: 2398294.5196850393
[2026-01-27 09:01:57] 2026-01-27 08:01:31,445 | INFO     | intersect: 56986930176.010376
[2026-01-27 09:01:57] 2026-01-27 08:01:31,445 | INFO     | chi2: 1.9863686361945474
[2026-01-27 09:01:57] 2026-01-27 08:01:31,445 | INFO     | sum of square deviations: 563026370.5
[2026-01-27 09:01:57] 2026-01-27 08:01:31,446 | INFO     | sum of deviations: -12246055213.500004
[2026-01-27 09:01:57] 2026-01-27 08:01:31,446 | INFO     | mean x: 1769496873.5
[2026-01-27 09:01:57] 2026-01-27 08:01:31,446 | INFO     | mean y: 2415151.8278688523
[2026-01-27 09:01:57] 2026-01-27 08:01:31,446 | INFO     | intersect: 38489700203.419655
[2026-01-27 09:01:57] 2026-01-27 08:01:31,446 | INFO     | chi2: 1.31196944201897
[2026-01-27 09:01:57] 2026-01-27 08:01:31,446 | INFO     | current chi2=1.31196944201897 (change=33.95136138816511 %)
[2026-01-27 09:01:57] 2026-01-27 08:01:31,446 | INFO     | sum of square deviations: 496597218.0
[2026-01-27 09:01:57] 2026-01-27 08:01:31,446 | INFO     | sum of deviations: -11636514696.0
[2026-01-27 09:01:57] 2026-01-27 08:01:31,447 | INFO     | mean x: 1769496721.0
[2026-01-27 09:01:57] 2026-01-27 08:01:31,447 | INFO     | mean y: 2416551.923076923
[2026-01-27 09:01:57] 2026-01-27 08:01:31,447 | INFO     | intersect: 41466149839.37035
[2026-01-27 09:01:57] 2026-01-27 08:01:31,447 | INFO     | chi2: 1.3060327731782784
[2026-01-27 09:01:57] 2026-01-27 08:01:31,447 | INFO     | current chi2=1.3060327731782784 (change=0.4525005423568258 %)
[2026-01-27 09:01:57] 2026-01-27 08:01:31,447 | INFO     | right removable region: 116
[2026-01-27 09:01:57] 2026-01-27 08:01:31,447 | INFO     | sum of square deviations: 563026370.5
[2026-01-27 09:01:57] 2026-01-27 08:01:31,447 | INFO     | sum of deviations: -27696307721.500004
[2026-01-27 09:01:57] 2026-01-27 08:01:31,447 | INFO     | mean x: 1769497178.5
[2026-01-27 09:01:57] 2026-01-27 08:01:31,448 | INFO     | mean y: 2412837.450819672
[2026-01-27 09:01:57] 2026-01-27 08:01:31,448 | INFO     | intersect: 87047249342.24828
[2026-01-27 09:01:57] 2026-01-27 08:01:31,448 | INFO     | chi2: 0.934803489878698
[2026-01-27 09:01:57] 2026-01-27 08:01:31,448 | INFO     | current chi2=0.934803489878698 (change=52.939073198941585 %)
[2026-01-27 09:01:57] 2026-01-27 08:01:31,448 | INFO     | sum of square deviations: 496597218.0
[2026-01-27 09:01:57] 2026-01-27 08:01:31,448 | INFO     | sum of deviations: -21092099747.0
[2026-01-27 09:01:57] 2026-01-27 08:01:31,448 | INFO     | mean x: 1769497331.0
[2026-01-27 09:01:57] 2026-01-27 08:01:31,448 | INFO     | mean y: 2397661.829059829
[2026-01-27 09:01:57] 2026-01-27 08:01:31,448 | INFO     | intersect: 75158707151.06642
[2026-01-27 09:01:57] 2026-01-27 08:01:31,449 | INFO     | chi2: 0.8983862084425634
[2026-01-27 09:01:57] 2026-01-27 08:01:31,449 | INFO     | current chi2=0.8983862084425634 (change=3.8957151776209265 %)
[2026-01-27 09:01:57] 2026-01-27 08:01:31,449 | INFO     | left removable region: 20
[2026-01-27 09:01:57] 2026-01-27 08:01:31,449 | INFO     | sum of square deviations: 274312120.0
[2026-01-27 09:01:57] 2026-01-27 08:01:31,449 | INFO     | sum of deviations: -1064064022.5
[2026-01-27 09:01:57] 2026-01-27 08:01:31,449 | INFO     | mean x: 1769497300.5
[2026-01-27 09:01:57] 2026-01-27 08:01:31,449 | INFO     | mean y: 2379949.5729166665
[2026-01-27 09:01:57] 2026-01-27 08:01:31,449 | INFO     | intersect: 6866307126.29745
[2026-01-27 09:01:57] 2026-01-27 08:01:31,449 | INFO     | chi2: 0.030389447931042007
[2026-01-27 09:01:57] 2026-01-27 08:01:31,449 | INFO     | current memory leak: -3.88 B/s (using 96 data points, chi2=0.03)
[2026-01-27 09:01:57] 2026-01-27 08:01:31,450 | INFO     | could have reported an average CPU frequency of 3749 MHz (8 samples)
[2026-01-27 09:01:57] 2026-01-27 08:01:31,450 | INFO     | ..............................
[2026-01-27 09:01:57] 2026-01-27 08:01:31,450 | INFO     | . Timing measurements:
[2026-01-27 09:01:57] 2026-01-27 08:01:31,450 | INFO     | . get job = 0 s
[2026-01-27 09:01:57] 2026-01-27 08:01:31,450 | INFO     | . initial setup = 3 s
[2026-01-27 09:01:57] 2026-01-27 08:01:31,450 | INFO     | . payload setup = 10 s
[2026-01-27 09:01:57] 2026-01-27 08:01:31,450 | INFO     | . stage-in = 0 s
[2026-01-27 09:01:57] 2026-01-27 08:01:31,450 | INFO     | . payload execution = 7704 s
[2026-01-27 09:01:57] 2026-01-27 08:01:31,450 | INFO     | . stage-out = 0 s
[2026-01-27 09:01:57] 2026-01-27 08:01:31,450 | INFO     | . log creation = 0 s
[2026-01-27 09:01:57] 2026-01-27 08:01:31,450 | INFO     | ..............................
[2026-01-27 09:01:57] 2026-01-27 08:01:31,495 | INFO     | 
[2026-01-27 09:01:57] 2026-01-27 08:01:31,495 | INFO     | job summary report
[2026-01-27 09:01:57] 2026-01-27 08:01:31,496 | INFO     | --------------------------------------------------
[2026-01-27 09:01:57] 2026-01-27 08:01:31,496 | INFO     | PanDA job id: 6984061842
[2026-01-27 09:01:57] 2026-01-27 08:01:31,496 | INFO     | task id: 48317872
[2026-01-27 09:01:57] 2026-01-27 08:01:31,496 | INFO     | errors: (none)
[2026-01-27 09:01:57] 2026-01-27 08:01:31,496 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-27 09:01:57] 2026-01-27 08:01:31,496 | INFO     | pilot state: finished 
[2026-01-27 09:01:57] 2026-01-27 08:01:31,496 | INFO     | transexitcode: 0
[2026-01-27 09:01:57] 2026-01-27 08:01:31,496 | INFO     | exeerrorcode: 0
[2026-01-27 09:01:57] 2026-01-27 08:01:31,496 | INFO     | exeerrordiag: 
[2026-01-27 09:01:57] 2026-01-27 08:01:31,496 | INFO     | exitcode: 0
[2026-01-27 09:01:57] 2026-01-27 08:01:31,496 | INFO     | exitmsg: OK
[2026-01-27 09:01:57] 2026-01-27 08:01:31,496 | INFO     | cpuconsumptiontime: 29845 s
[2026-01-27 09:01:57] 2026-01-27 08:01:31,496 | INFO     | nevents: 400
[2026-01-27 09:01:57] 2026-01-27 08:01:31,496 | INFO     | neventsw: 0
[2026-01-27 09:01:57] 2026-01-27 08:01:31,496 | INFO     | pid: 3995065
[2026-01-27 09:01:57] 2026-01-27 08:01:31,496 | INFO     | pgrp: 3995065
[2026-01-27 09:01:57] 2026-01-27 08:01:31,497 | INFO     | corecount: 4
[2026-01-27 09:01:57] 2026-01-27 08:01:31,497 | INFO     | event service: False
[2026-01-27 09:01:57] 2026-01-27 08:01:31,497 | INFO     | sizes: {0: 2284234, 11: 2284234, 7717: 2311976, 7719: 2320974, 7721: 2321224}
[2026-01-27 09:01:57] 2026-01-27 08:01:31,497 | INFO     | --------------------------------------------------
[2026-01-27 09:01:57] 2026-01-27 08:01:31,497 | INFO     | 
[2026-01-27 09:01:57] 2026-01-27 08:01:31,497 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2026-01-27 09:01:57] 2026-01-27 08:01:31,505 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-27 09:01:57] 2026-01-27 08:01:31,506 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-27 09:01:57] 2026-01-27 08:01:31,506 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-27 09:01:57] 2026-01-27 08:01:31,506 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-27 09:01:57] 2026-01-27 08:01:31,506 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-27 09:01:57] 2026-01-27 08:01:31,506 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-27 09:01:57] 2026-01-27 08:01:31,506 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-27 09:01:57] 2026-01-27 08:01:31,506 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-27 09:01:57] 2026-01-27 08:01:31,506 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-27 09:01:57] 2026-01-27 08:01:31,506 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-27 09:01:57] 2026-01-27 08:01:31,506 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-27 09:01:57] 2026-01-27 08:01:31,506 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-27 09:01:57] 2026-01-27 08:01:31,506 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-27 09:01:57] 2026-01-27 08:01:31,506 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-27 09:01:57] 2026-01-27 08:01:31,506 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-27 09:01:57] 2026-01-27 08:01:31,506 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-27 09:01:57] 2026-01-27 08:01:31,506 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-27 09:01:57] 2026-01-27 08:01:31,507 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-27 09:01:57] 2026-01-27 08:01:31,507 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-27 09:01:57] 2026-01-27 08:01:31,507 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-27 09:01:57] 2026-01-27 08:01:31,507 | INFO     | job 6984061842 has completed (purged errors)
[2026-01-27 09:01:57] 2026-01-27 08:01:31,507 | INFO     | overall cleanup function is called
[2026-01-27 09:01:57] 2026-01-27 08:01:32,512 | INFO     | --- collectZombieJob: --- 10, [3995065]
[2026-01-27 09:01:57] 2026-01-27 08:01:32,512 | INFO     | zombie collector waiting for pid 3995065
[2026-01-27 09:01:57] 2026-01-27 08:01:32,513 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 09:01:57] 2026-01-27 08:01:32,513 | INFO     | collected zombie processes
[2026-01-27 09:01:57] 2026-01-27 08:01:32,513 | INFO     | will attempt to kill all subprocesses of pid=3995065
[2026-01-27 09:01:57] 2026-01-27 08:01:32,552 | INFO     | process IDs to be killed: [3995065] (in reverse order)
[2026-01-27 09:01:57] 2026-01-27 08:01:32,593 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 09:01:57] 2026-01-27 08:01:32,593 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 09:01:57] 2026-01-27 08:01:32,595 | INFO     | did not find any defunct processes belonging to 3995065
[2026-01-27 09:01:57] 2026-01-27 08:01:32,596 | INFO     | did not find any defunct processes belonging to 3995065
[2026-01-27 09:01:57] 2026-01-27 08:01:32,596 | INFO     | ready for new job
[2026-01-27 09:01:57] 2026-01-27 08:01:32,596 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 09:01:57] 2026-01-27 08:01:32,597 | INFO     | **************************************
[2026-01-27 09:01:57] 2026-01-27 08:01:32,597 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 09:01:57] 2026-01-27 08:01:32,597 | INFO     | **************************************
[2026-01-27 09:01:57] 2026-01-27 08:01:32,597 | INFO     | 
[2026-01-27 09:01:57] 2026-01-27 08:01:32,597 | INFO     | architecture information:
[2026-01-27 09:01:57] 2026-01-27 08:01:32,598 | INFO     | executing command: cat /etc/os-release
[2026-01-27 09:01:57] 2026-01-27 08:01:32,614 | INFO     | cat /etc/os-release:
[2026-01-27 09:01:57] NAME="CentOS Linux"
[2026-01-27 09:01:57] VERSION="7 (Core)"
[2026-01-27 09:01:57] ID="centos"
[2026-01-27 09:01:57] ID_LIKE="rhel fedora"
[2026-01-27 09:01:57] VERSION_ID="7"
[2026-01-27 09:01:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 09:01:57] ANSI_COLOR="0;31"
[2026-01-27 09:01:57] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 09:01:57] HOME_URL="https://www.centos.org/"
[2026-01-27 09:01:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 09:01:57] 
[2026-01-27 09:01:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 09:01:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 09:01:57] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 09:01:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 09:01:57] 
[2026-01-27 09:01:57] 2026-01-27 08:01:32,615 | INFO     | **************************************
[2026-01-27 09:01:57] 2026-01-27 08:01:32,981 | WARNING  | process 3995065 can no longer be monitored (due to stat problems) - aborting
[2026-01-27 09:01:57] 2026-01-27 08:01:33,013 | INFO     | using path: /var/lib/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 09:01:57] 2026-01-27 08:01:33,014 | INFO     | using path: /var/lib/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 09:01:57] 2026-01-27 08:01:33,014 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-01-27 09:01:57] 2026-01-27 08:01:33,014 | WARNING  | maxPSS not found in memory monitor output
[2026-01-27 09:01:57] 2026-01-27 08:01:33,014 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc/slots/0/PanDA_Pilot-6984061842/payload.stdout) since it has not been created yet
[2026-01-27 09:01:57] 2026-01-27 08:01:33,015 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2026-01-27 09:01:57] 2026-01-27 08:01:33,022 | INFO     | sufficient remaining disk space (325950898176 B)
[2026-01-27 09:01:57] 2026-01-27 08:01:33,022 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-01-27 09:01:57] 2026-01-27 08:01:33,022 | INFO     | output file size check: skipping output file /var/lib/boinc/slots/0/PanDA_Pilot-6984061842/HITS.48317872._002857.pool.root.1 since it does not exist
[2026-01-27 09:01:57] 2026-01-27 08:01:33,062 | INFO     | number of running child processes to parent process 3995065: 1
[2026-01-27 09:01:57] 2026-01-27 08:01:33,062 | INFO     | maximum number of monitored processes: 6
[2026-01-27 09:01:57] 2026-01-27 08:01:33,062 | INFO     | aborting job monitoring since job object (job id=6984061842) has expired
[2026-01-27 09:01:57] 2026-01-27 08:01:33,117 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2026-01-27 09:01:57] 2026-01-27 08:01:33,125 | INFO     | sufficient remaining disk space (325950898176 B)
[2026-01-27 09:01:57] 2026-01-27 08:01:33,125 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 09:01:57] 2026-01-27 08:01:33,125 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 09:01:57] 2026-01-27 08:01:33,125 | INFO     | update_server=False
[2026-01-27 09:01:57] 2026-01-27 08:01:33,125 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 09:01:57] 2026-01-27 08:01:33,125 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 09:01:57] 2026-01-27 08:01:33,125 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 09:01:57] 2026-01-27 08:01:33,125 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-27 09:01:57] 2026-01-27 08:01:33,125 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 09:01:57] 2026-01-27 08:01:33,125 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 09:01:57] 2026-01-27 08:01:33,126 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 09:01:57] 2026-01-27 08:01:33,126 | INFO     | will abort loop
[2026-01-27 09:01:57] 2026-01-27 08:01:33,126 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 09:01:57] 2026-01-27 08:01:33,126 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 09:01:57] 2026-01-27 08:01:33,276 | INFO     | all job control threads have been joined
[2026-01-27 09:01:57] 2026-01-27 08:01:33,304 | INFO     | all data control threads have been joined
[2026-01-27 09:01:57] 2026-01-27 08:01:34,130 | INFO     | [job] retrieve thread has finished
[2026-01-27 09:01:57] 2026-01-27 08:01:34,131 | INFO     | [job] job monitor thread has finished
[2026-01-27 09:01:57] 2026-01-27 08:01:34,131 | INFO     | [job] queue monitor thread has finished
[2026-01-27 09:01:57] 2026-01-27 08:01:34,254 | INFO     | all payload control threads have been joined
[2026-01-27 09:01:57] 2026-01-27 08:01:34,259 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 09:01:57] 2026-01-27 08:01:34,281 | INFO     | [job] control thread has finished
[2026-01-27 09:01:57] 2026-01-27 08:01:34,309 | INFO     | [data] control thread has finished
[2026-01-27 09:01:57] 2026-01-27 08:01:34,424 | INFO     | [payload] failed_post thread has finished
[2026-01-27 09:01:57] 2026-01-27 08:01:34,509 | INFO     | [job] validate thread has finished
[2026-01-27 09:01:57] 2026-01-27 08:01:34,602 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 09:01:57] 2026-01-27 08:01:34,769 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 09:01:57] 2026-01-27 08:01:34,785 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 09:01:57] 2026-01-27 08:01:35,015 | INFO     | [data] copytool_in thread has finished
[2026-01-27 09:01:57] 2026-01-27 08:01:35,126 | INFO     | [data] copytool_out thread has finished
[2026-01-27 09:01:57] 2026-01-27 08:01:35,259 | INFO     | [payload] control thread has finished
[2026-01-27 09:01:57] 2026-01-27 08:01:35,295 | INFO     | [payload] validate_post thread has finished
[2026-01-27 09:01:57] 2026-01-27 08:01:37,130 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 09:01:57] 2026-01-27 08:01:51,487 | INFO     | [monitor] cgroup control has ended
[2026-01-27 09:01:57] 2026-01-27 08:01:51,710 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140050630891328)>', '<ExcThread(monitor, started 140049932863232)>']
[2026-01-27 09:01:57] 2026-01-27 08:01:52,220 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 09:01:57] 2026-01-27 08:01:52,220 | INFO     | [monitor] control thread has ended
[2026-01-27 09:01:57] 2026-01-27 08:01:56,734 | INFO     | all workflow threads have been joined
[2026-01-27 09:01:57] 2026-01-27 08:01:56,734 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 09:01:57] 2026-01-27 08:01:56,735 | INFO     | traces error code: 0
[2026-01-27 09:01:57] 2026-01-27 08:01:56,735 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 09:01:57] 2026-01-27 08:01:56,984 [wrapper] ==== pilot stdout END ====
[2026-01-27 09:01:57] 2026-01-27 08:01:56,985 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 09:01:57] 2026-01-27 08:01:56,986 [wrapper] pilotpid: 3989897
[2026-01-27 09:01:57] 2026-01-27 08:01:56,987 [wrapper] Pilot exit status: 0
[2026-01-27 09:01:57] 2026-01-27 08:01:57,028 [wrapper] pandaids: 6984061842
[2026-01-27 09:01:57] 2026-01-27 08:01:57,039 [wrapper] cleanup supervisor_pilot 4013082 3989898
[2026-01-27 09:01:57] 2026-01-27 08:01:57,040 [wrapper] Test setup, not cleaning
[2026-01-27 09:01:57] 2026-01-27 08:01:57,042 [wrapper] apfmon messages muted
[2026-01-27 09:01:57] 2026-01-27 08:01:57,043 [wrapper] ==== wrapper stdout END ====
[2026-01-27 09:01:57] 2026-01-27 08:01:57,044 [wrapper] ==== wrapper stderr END ====
[2026-01-27 09:01:57]  *** Error codes and diagnostics ***
[2026-01-27 09:01:57]     "exeErrorCode": 0,
[2026-01-27 09:01:57]     "exeErrorDiag": "",
[2026-01-27 09:01:57]     "pilotErrorCode": 0,
[2026-01-27 09:01:57]     "pilotErrorDiag": "",
[2026-01-27 09:01:57]  *** Listing of results directory ***
[2026-01-27 09:01:57] total 664472
[2026-01-27 09:01:57] -rw-r--r-- 1 boinc boinc    584422 Jan 26 08:37 pilot3.tar.gz
[2026-01-27 09:01:57] -rw-r--r-- 1 boinc boinc      5111 Jan 26 08:38 queuedata.json
[2026-01-27 09:01:57] -rwx------ 1 boinc boinc     36322 Jan 26 08:38 runpilot2-wrapper.sh
[2026-01-27 09:01:57] -rw-r--r-- 1 boinc boinc       100 Jan 27 06:52 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 09:01:57] -rwxr-xr-x 1 boinc boinc      7986 Jan 27 06:52 run_atlas
[2026-01-27 09:01:57] -rw-r--r-- 1 boinc boinc       105 Jan 27 06:52 job.xml
[2026-01-27 09:01:57] -rw-r--r-- 1 boinc boinc      6312 Jan 27 06:52 init_data.xml
[2026-01-27 09:01:57] -rw-r--r-- 2 boinc boinc 493675280 Jan 27 06:52 EVNT.48317869._000057.pool.root.1
[2026-01-27 09:01:57] -rw-r--r-- 2 boinc boinc     15845 Jan 27 06:52 start_atlas.sh
[2026-01-27 09:01:57] drwxrwx--x 2 boinc boinc        68 Jan 27 06:52 shared
[2026-01-27 09:01:57] -rw-r--r-- 2 boinc boinc    597750 Jan 27 06:52 input.tar.gz
[2026-01-27 09:01:57] -rw-r--r-- 1 boinc boinc         0 Jan 27 06:52 boinc_lockfile
[2026-01-27 09:01:57] -rw-r--r-- 1 boinc boinc      2515 Jan 27 06:52 pandaJob.out
[2026-01-27 09:01:57] -rw------- 1 boinc boinc   1004335 Jan 27 06:52 agis_schedconf.cvmfs.json
[2026-01-27 09:01:57] -rw------- 1 boinc boinc   1516246 Jan 27 06:52 agis_ddmendpoints.agis.ALL.json
[2026-01-27 09:01:57] -rw------- 1 boinc boinc       420 Jan 27 06:52 workernode_map.json
[2026-01-27 09:01:57] drwx------ 5 boinc boinc      4096 Jan 27 06:52 pilot3
[2026-01-27 09:01:57] -rw------- 1 boinc boinc 179924048 Jan 27 09:00 HITS.48317872._002857.pool.root.1
[2026-01-27 09:01:57] -rw-r--r-- 1 boinc boinc       530 Jan 27 09:01 boinc_task_state.xml
[2026-01-27 09:01:57] -rw------- 1 boinc boinc        95 Jan 27 09:01 pilot_heartbeat.json
[2026-01-27 09:01:57] -rw------- 1 boinc boinc      1026 Jan 27 09:01 memory_monitor_summary.json
[2026-01-27 09:01:57] -rw------- 1 boinc boinc    339165 Jan 27 09:01 log.48317872._002857.job.log.tgz.1
[2026-01-27 09:01:57] -rw------- 1 boinc boinc      6332 Jan 27 09:01 heartbeat.json
[2026-01-27 09:01:57] -rw-r--r-- 1 boinc boinc      8192 Jan 27 09:01 boinc_mmap_file
[2026-01-27 09:01:57] -rw-r--r-- 1 boinc boinc        27 Jan 27 09:01 wrapper_checkpoint.txt
[2026-01-27 09:01:57] -rw------- 1 boinc boinc      6035 Jan 27 09:01 pilotlog.txt
[2026-01-27 09:01:57] -rw------- 1 boinc boinc   1109296 Jan 27 09:01 log.48317872._002857.job.log.1
[2026-01-27 09:01:57] -rw------- 1 boinc boinc       357 Jan 27 09:01 output.list
[2026-01-27 09:01:57] -rw-r--r-- 1 boinc boinc       620 Jan 27 09:01 runtime_log
[2026-01-27 09:01:57] -rw------- 1 boinc boinc   1464320 Jan 27 09:01 result.tar.gz
[2026-01-27 09:01:57] -rw-r--r-- 1 boinc boinc      8815 Jan 27 09:01 runtime_log.err
[2026-01-27 09:01:57] -rw------- 1 boinc boinc       652 Jan 27 09:01 hpgKDmfMW48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmnl2KDm8oq2No.diag
[2026-01-27 09:01:57] -rw-r--r-- 1 boinc boinc     21425 Jan 27 09:01 stderr.txt
[2026-01-27 09:01:57] HITS file was successfully produced:
[2026-01-27 09:01:57] -rw------- 1 boinc boinc 179924048 Jan 27 09:00 shared/HITS.pool.root.1
[2026-01-27 09:01:57]  *** Contents of shared directory: ***
[2026-01-27 09:01:57] total 659848
[2026-01-27 09:01:57] -rw-r--r-- 2 boinc boinc 493675280 Jan 27 06:52 ATLAS.root_0
[2026-01-27 09:01:57] -rw-r--r-- 2 boinc boinc     15845 Jan 27 06:52 start_atlas.sh
[2026-01-27 09:01:57] -rw-r--r-- 2 boinc boinc    597750 Jan 27 06:52 input.tar.gz
[2026-01-27 09:01:57] -rw------- 1 boinc boinc 179924048 Jan 27 09:00 HITS.pool.root.1
[2026-01-27 09:01:57] -rw------- 1 boinc boinc   1464320 Jan 27 09:01 result.tar.gz
09:01:59 (3985915): run_atlas exited; CPU time 29887.624238
09:01:59 (3985915): called boinc_finish(0)

</stderr_txt>
]]>

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