Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
16:49:05 (442938): wrapper (7.7.26015): starting
16:49:05 (442938): wrapper: running run_atlas (--nthreads 3)
[2026-01-27 16:49:05] Arguments: --nthreads 3
[2026-01-27 16:49:05] Threads: 3
[2026-01-27 16:49:05] Checking for CVMFS
[2026-01-27 16:49:05] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-27 16:49:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-27 16:49:06] Running cvmfs_config stat atlas.cern.ch
[2026-01-27 16:49:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-27 16:49:06] 2.9.2.0 2933211 9647 86756 155589 0 50 25950091 36864001 0 130560 0 4425527 99.987 315729 7841 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-27 16:49:06] CVMFS is ok
[2026-01-27 16:49:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-27 16:49:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-27 16:49:06] Further information can be found at the LHC@home message board.
[2026-01-27 16:49:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-27 16:49:06] Checking for apptainer binary...
[2026-01-27 16:49:06] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-27 16:49:06] Running /usr/bin/apptainer --version
[2026-01-27 16:49:06] apptainer version 1.4.1-1.1
[2026-01-27 16:49:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-27 16:49:06] thA323
[2026-01-27 16:49:06] apptainer works
[2026-01-27 16:49:06] Set ATHENA_PROC_NUMBER=3
[2026-01-27 16:49:06] Set ATHENA_CORE_NUMBER=3
[2026-01-27 16:49:06] Starting ATLAS job with PandaID=6982529456
[2026-01-27 16:49:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 18:04:30]  *** The last 200 lines of the pilot log: ***
[2026-01-27 18:04:30] 2026-01-27 17:03:59,622 | INFO     | aborting loop
[2026-01-27 18:04:30] 2026-01-27 17:03:59,622 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 18:04:30] 2026-01-27 17:03:59,658 | INFO     | all data control threads have been joined
[2026-01-27 18:04:30] 2026-01-27 17:04:00,627 | INFO     | [job] retrieve thread has finished
[2026-01-27 18:04:30] 2026-01-27 17:04:00,628 | INFO     | [job] job monitor thread has finished
[2026-01-27 18:04:30] 2026-01-27 17:04:00,628 | INFO     | [job] queue monitor thread has finished
[2026-01-27 18:04:30] 2026-01-27 17:04:00,664 | INFO     | [data] control thread has finished
[2026-01-27 18:04:30] 2026-01-27 17:04:00,699 | INFO     | [data] copytool_in thread has finished
[2026-01-27 18:04:30] 2026-01-27 17:04:00,740 | INFO     | all job control threads have been joined
[2026-01-27 18:04:30] 2026-01-27 17:04:00,933 | INFO     | all payload control threads have been joined
[2026-01-27 18:04:30] 2026-01-27 17:04:01,074 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 18:04:30] 2026-01-27 17:04:01,504 | INFO     | [payload] validate_post thread has finished
[2026-01-27 18:04:30] 2026-01-27 17:04:01,504 | INFO     | [payload] failed_post thread has finished
[2026-01-27 18:04:30] 2026-01-27 17:04:01,628 | INFO     | [data] copytool_out thread has finished
[2026-01-27 18:04:30] 2026-01-27 17:04:01,743 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 18:04:30] 2026-01-27 17:04:01,746 | INFO     | [job] control thread has finished
[2026-01-27 18:04:30] 2026-01-27 17:04:01,938 | INFO     | [payload] control thread has finished
[2026-01-27 18:04:30] 2026-01-27 17:04:01,969 | INFO     | [job] validate thread has finished
[2026-01-27 18:04:30] 2026-01-27 17:04:01,978 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 18:04:30] 2026-01-27 17:04:02,070 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 18:04:30] 2026-01-27 17:04:05,750 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 18:04:30] 2026-01-27 17:04:10,601 | INFO     | job.realtimelogging is not enabled
[2026-01-27 18:04:30] 2026-01-27 17:04:11,607 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 18:04:30] 2026-01-27 17:04:13,128 [wrapper] supervise_pilot (15 min periods counter: 6)
[2026-01-27 18:04:30] 2026-01-27 17:04:21,944 | INFO     | [monitor] cgroup control has ended
[2026-01-27 18:04:30] 2026-01-27 17:04:23,263 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139986127742784)>', '<ExcThread(monitor, started 139985642571520)>']
[2026-01-27 18:04:30] 2026-01-27 17:04:28,289 | INFO     | all workflow threads have been joined
[2026-01-27 18:04:30] 2026-01-27 17:04:28,289 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 18:04:30] 2026-01-27 17:04:28,289 | INFO     | traces error code: 0
[2026-01-27 18:04:30] 2026-01-27 17:04:28,289 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 18:04:30] 2026-01-27 17:04:30,168 | INFO     | PID=446983 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-27 18:04:30] 2026-01-27 17:04:30,168 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 18:04:30] 2026-01-27 17:04:30,168 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 18:04:30] 2026-01-27 17:04:30,168 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 18:04:30] 2026-01-27 17:04:30,168 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 18:04:30] 2026-01-27 17:04:30,168 | INFO     | [monitor] control thread has ended
[2026-01-27 18:04:30] 2026-01-27 17:04:30,217 [wrapper] ==== pilot stdout END ====
[2026-01-27 18:04:30] 2026-01-27 17:04:30,220 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 18:04:30] 2026-01-27 17:04:30,223 [wrapper] pilotpid: 446983
[2026-01-27 18:04:30] 2026-01-27 17:04:30,225 [wrapper] Pilot exit status: 0
[2026-01-27 18:04:30] 2026-01-27 17:04:30,233 [wrapper] pandaids: 6982529456
[2026-01-27 18:04:30] 2026-01-27 17:04:30,256 [wrapper] cleanup supervisor_pilot  458210 446984
[2026-01-27 18:04:30] 2026-01-27 17:04:30,258 [wrapper] Test setup, not cleaning
[2026-01-27 18:04:30] 2026-01-27 17:04:30,261 [wrapper] apfmon messages muted
[2026-01-27 18:04:30] 2026-01-27 17:04:30,263 [wrapper] ==== wrapper stdout END ====
[2026-01-27 18:04:30] 2026-01-27 17:04:30,266 [wrapper] ==== wrapper stderr END ====
[2026-01-27 18:04:30]  *** Error codes and diagnostics ***
[2026-01-27 18:04:30]     "exeErrorCode": 0,
[2026-01-27 18:04:30]     "exeErrorDiag": "",
[2026-01-27 18:04:30]     "pilotErrorCode": 0,
[2026-01-27 18:04:30]     "pilotErrorDiag": "",
[2026-01-27 18:04:30]  *** Listing of results directory ***
[2026-01-27 18:04:30] total 661904
[2026-01-27 18:04:30] -rwx------ 1 boinc boinc     36322 Jan 25 06:14 runpilot2-wrapper.sh
[2026-01-27 18:04:30] -rw-r--r-- 1 boinc boinc      5111 Jan 25 06:15 queuedata.json
[2026-01-27 18:04:30] -rw-r--r-- 1 boinc boinc    584422 Jan 25 06:15 pilot3.tar.gz
[2026-01-27 18:04:30] -rw-r--r-- 1 boinc boinc       100 Jan 27 16:49 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 18:04:30] -rwxr-xr-x 1 boinc boinc      7986 Jan 27 16:49 run_atlas
[2026-01-27 18:04:30] -rw-r--r-- 1 boinc boinc       105 Jan 27 16:49 job.xml
[2026-01-27 18:04:30] -rw-r--r-- 2 boinc boinc 494544272 Jan 27 16:49 EVNT.48310824._000101.pool.root.1
[2026-01-27 18:04:30] -rw-r--r-- 2 boinc boinc    597753 Jan 27 16:49 input.tar.gz
[2026-01-27 18:04:30] -rw-r--r-- 2 boinc boinc     15845 Jan 27 16:49 start_atlas.sh
[2026-01-27 18:04:30] drwxrwx--x 2 boinc boinc      4096 Jan 27 16:49 shared
[2026-01-27 18:04:30] -rw-r--r-- 1 boinc boinc         0 Jan 27 16:49 boinc_setup_complete
[2026-01-27 18:04:30] -rw-r--r-- 1 boinc boinc      6446 Jan 27 16:49 init_data.xml
[2026-01-27 18:04:30] -rw-r--r-- 1 boinc boinc         0 Jan 27 16:49 boinc_lockfile
[2026-01-27 18:04:30] -rw-r--r-- 1 boinc boinc      2523 Jan 27 16:49 pandaJob.out
[2026-01-27 18:04:30] -rw------- 1 boinc boinc   1005162 Jan 27 16:49 agis_schedconf.cvmfs.json
[2026-01-27 18:04:30] -rw------- 1 boinc boinc   1516246 Jan 27 16:49 agis_ddmendpoints.agis.ALL.json
[2026-01-27 18:04:30] -rw------- 1 boinc boinc       423 Jan 27 16:49 workernode_map.json
[2026-01-27 18:04:30] drwx------ 5 boinc boinc      4096 Jan 27 16:49 pilot3
[2026-01-27 18:04:30] -rw-r--r-- 1 boinc boinc       530 Jan 27 18:03 boinc_task_state.xml
[2026-01-27 18:04:30] -rw------- 1 boinc boinc 177514975 Jan 27 18:03 HITS.48310826._009110.pool.root.1
[2026-01-27 18:04:30] -rw------- 1 boinc boinc        95 Jan 27 18:03 pilot_heartbeat.json
[2026-01-27 18:04:30] -rw------- 1 boinc boinc      1011 Jan 27 18:03 memory_monitor_summary.json
[2026-01-27 18:04:30] -rw------- 1 boinc boinc    248369 Jan 27 18:03 log.48310826._009110.job.log.tgz.1
[2026-01-27 18:04:30] -rw------- 1 boinc boinc      6285 Jan 27 18:03 heartbeat.json
[2026-01-27 18:04:30] -rw-r--r-- 1 boinc boinc      8192 Jan 27 18:04 boinc_mmap_file
[2026-01-27 18:04:30] -rw-r--r-- 1 boinc boinc        27 Jan 27 18:04 wrapper_checkpoint.txt
[2026-01-27 18:04:30] -rw------- 1 boinc boinc       746 Jan 27 18:04 pilotlog.txt
[2026-01-27 18:04:30] -rw------- 1 boinc boinc    658814 Jan 27 18:04 log.48310826._009110.job.log.1
[2026-01-27 18:04:30] -rw------- 1 boinc boinc       357 Jan 27 18:04 output.list
[2026-01-27 18:04:30] -rw-r--r-- 1 boinc boinc       620 Jan 27 18:04 runtime_log
[2026-01-27 18:04:30] -rw------- 1 boinc boinc    921600 Jan 27 18:04 result.tar.gz
[2026-01-27 18:04:30] -rw-r--r-- 1 boinc boinc      8896 Jan 27 18:04 runtime_log.err
[2026-01-27 18:04:30] -rw------- 1 boinc boinc       657 Jan 27 18:04 pKeMDmEd738n9Rq4apOajLDm4fhM0noT9bVo0NGKDmc7zKDmbnf0mn.diag
[2026-01-27 18:04:30] -rw-r--r-- 1 boinc boinc      7129 Jan 27 18:04 stderr.txt
[2026-01-27 18:04:30] HITS file was successfully produced:
[2026-01-27 18:04:30] -rw------- 1 boinc boinc 177514975 Jan 27 18:03 shared/HITS.pool.root.1
[2026-01-27 18:04:30]  *** Contents of shared directory: ***
[2026-01-27 18:04:30] total 657820
[2026-01-27 18:04:30] -rw-r--r-- 2 boinc boinc 494544272 Jan 27 16:49 ATLAS.root_0
[2026-01-27 18:04:30] -rw-r--r-- 2 boinc boinc    597753 Jan 27 16:49 input.tar.gz
[2026-01-27 18:04:30] -rw-r--r-- 2 boinc boinc     15845 Jan 27 16:49 start_atlas.sh
[2026-01-27 18:04:30] -rw------- 1 boinc boinc 177514975 Jan 27 18:03 HITS.pool.root.1
[2026-01-27 18:04:30] -rw------- 1 boinc boinc    921600 Jan 27 18:04 result.tar.gz
18:04:31 (442938): run_atlas exited; CPU time 12790.468847
18:04:31 (442938): called boinc_finish(0)

</stderr_txt>
]]>

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