Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
06:10:36 (459311): wrapper (7.7.26015): starting
06:10:36 (459311): wrapper: running run_atlas (--nthreads 12)
[2026-01-27 06:10:36] Arguments: --nthreads 12
[2026-01-27 06:10:36] Threads: 12
[2026-01-27 06:10:36] Checking for CVMFS
[2026-01-27 06:10:36] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-27 06:10:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-27 06:10:37] Running cvmfs_config stat atlas.cern.ch
[2026-01-27 06:10:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-27 06:10:37] 2.13.3.0 6794 491 53032 155583 1 188 5470147 6144000 2844 130560 0 1462721 99.997 19546 361 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-27 06:10:37] CVMFS is ok
[2026-01-27 06:10:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-27 06:10:37] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-27 06:10:37] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-27 06:10:37] Further information can be found at the LHC@home message board.
[2026-01-27 06:10:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-27 06:10:37] Checking for apptainer binary...
[2026-01-27 06:10:37] apptainer is not installed, using version from CVMFS
[2026-01-27 06:10:37] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-27 06:10:39] XeonFire
[2026-01-27 06:10:39] apptainer works
[2026-01-27 06:10:39] Set ATHENA_PROC_NUMBER=12
[2026-01-27 06:10:39] Set ATHENA_CORE_NUMBER=12
[2026-01-27 06:10:39] Starting ATLAS job with PandaID=6983467735
[2026-01-27 06:10:39] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 07:17:18]  *** The last 200 lines of the pilot log: ***
[2026-01-27 07:17:18]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-01-27 07:17:18]  is_altstaged=None
[2026-01-27 07:17:18]  is_tar=False
[2026-01-27 07:17:18]  lfn=log.48318034._001773.job.log.tgz.1
[2026-01-27 07:17:18]  mtime=0
[2026-01-27 07:17:18]  protocol_id=None
[2026-01-27 07:17:18]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-27 07:17:18]  replicas=None
[2026-01-27 07:17:18]  scope=mc23_13p6TeV
[2026-01-27 07:17:18]  status=None
[2026-01-27 07:17:18]  status_code=0
[2026-01-27 07:17:18]  storage_token=
[2026-01-27 07:17:18]  surl=/var/lib/boinc-client/slots/3/PanDA_Pilot-6983467735/log.48318034._001773.job.log.tgz.1
[2026-01-27 07:17:18]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/89/f5/log.48318034._001773.job.log.tgz.1
[2026-01-27 07:17:18]  workdir=None
[2026-01-27 07:17:18] ]
[2026-01-27 07:17:18] 2026-01-27 13:16:38,247 | INFO     | transferring file log.48318034._001773.job.log.tgz.1 from /var/lib/boinc-client/slots/3/PanDA_Pilot-6983467735/log.48318034._001773.job.log.tgz.1 to /var/lib/boinc
[2026-01-27 07:17:18] 2026-01-27 13:16:38,248 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/3/PanDA_Pilot-6983467735/log.48318034._001773.job.log.tgz.1 /var/lib/boinc-client/slots/3/log.483180
[2026-01-27 07:17:18] 2026-01-27 13:16:38,264 | INFO     | adding to output.list: log.48318034._001773.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/89/f5/log.48318034._001773.job.log.tg
[2026-01-27 07:17:18] 2026-01-27 13:16:38,265 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-27 07:17:18] 2026-01-27 13:16:38,265 | INFO     | summary of transferred files:
[2026-01-27 07:17:18] 2026-01-27 13:16:38,265 | INFO     |  -- lfn=log.48318034._001773.job.log.tgz.1, status_code=0, status=transferred
[2026-01-27 07:17:18] 2026-01-27 13:16:38,266 | INFO     | stage-out finished correctly
[2026-01-27 07:17:18] 2026-01-27 13:16:38,938 | INFO     | monitor loop #289: job 0:6983467735 is in state 'finished'
[2026-01-27 07:17:18] 2026-01-27 13:16:38,939 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-27 07:17:18] 2026-01-27 13:16:39,629 | INFO     | time since job start (3932s) is within the limit (349056.0s)
[2026-01-27 07:17:18] 2026-01-27 13:16:40,686 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-27 07:17:18] 2026-01-27 13:16:41,441 | INFO     | monitor loop #290: job 0:6983467735 is in state 'finished'
[2026-01-27 07:17:18] 2026-01-27 13:16:41,442 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-27 07:17:18] 2026-01-27 13:16:41,635 | INFO     | time since job start (3934s) is within the limit (349056.0s)
[2026-01-27 07:17:18] 2026-01-27 13:16:42,982 | INFO     | job 6983467735 has state=finished
[2026-01-27 07:17:18] 2026-01-27 13:16:42,983 | INFO     | preparing for final server update for job 6983467735 in state='finished'
[2026-01-27 07:17:18] 2026-01-27 13:16:42,983 | INFO     | reading metadata from: /var/lib/boinc-client/slots/3/PanDA_Pilot-6983467735/jobReport.json
[2026-01-27 07:17:18] 2026-01-27 13:16:42,987 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/3/workernode_map.json
[2026-01-27 07:17:18] 2026-01-27 13:16:42,987 | INFO     | this job has now completed (state=finished)
[2026-01-27 07:17:18] 2026-01-27 13:16:42,987 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-27 07:17:18] 2026-01-27 13:16:42,987 | INFO     | log transfer has been attempted: DONE
[2026-01-27 07:17:18] 2026-01-27 13:16:42,987 | INFO     | job 6983467735 has finished - writing final server update
[2026-01-27 07:17:18] 2026-01-27 13:16:42,988 | INFO     | total number of processed events: 400 (read)
[2026-01-27 07:17:18] 2026-01-27 13:16:43,000 | INFO     | using path: /var/lib/boinc-client/slots/3/PanDA_Pilot-6983467735/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 07:17:18] 2026-01-27 13:16:43,000 | INFO     | extracted standard info from prmon json
[2026-01-27 07:17:18] 2026-01-27 13:16:43,000 | INFO     | extracted standard memory fields from prmon json
[2026-01-27 07:17:18] 2026-01-27 13:16:43,000 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-27 07:17:18] 2026-01-27 13:16:43,001 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-27 07:17:18] 2026-01-27 13:16:43,001 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-27 07:17:18] 2026-01-27 13:16:43,003 | INFO     | fitting pss+swap vs Time
[2026-01-27 07:17:18] 2026-01-27 13:16:43,003 | INFO     | sum of square deviations: 60482994.5
[2026-01-27 07:17:18] 2026-01-27 13:16:43,003 | INFO     | sum of deviations: -32300567.50000011
[2026-01-27 07:17:18] 2026-01-27 13:16:43,003 | INFO     | mean x: 1769517932.5
[2026-01-27 07:17:18] 2026-01-27 13:16:43,003 | INFO     | mean y: 2692719.879310345
[2026-01-27 07:17:18] 2026-01-27 13:16:43,003 | INFO     | intersect: 947692779.7089685
[2026-01-27 07:17:18] 2026-01-27 13:16:43,004 | INFO     | chi2: 0.041632356542838
[2026-01-27 07:17:18] 2026-01-27 13:16:43,004 | INFO     | current memory leak: -0.53 B/s (using 58 data points, chi2=0.04)
[2026-01-27 07:17:18] 2026-01-27 13:16:43,004 | INFO     | could have reported an average CPU frequency of 2442 MHz (6 samples)
[2026-01-27 07:17:18] 2026-01-27 13:16:43,004 | INFO     | ..............................
[2026-01-27 07:17:18] 2026-01-27 13:16:43,004 | INFO     | . Timing measurements:
[2026-01-27 07:17:18] 2026-01-27 13:16:43,004 | INFO     | . get job = 0 s
[2026-01-27 07:17:18] 2026-01-27 13:16:43,004 | INFO     | . initial setup = 10 s
[2026-01-27 07:17:18] 2026-01-27 13:16:43,004 | INFO     | . payload setup = 5 s
[2026-01-27 07:17:18] 2026-01-27 13:16:43,004 | INFO     | . stage-in = 0 s
[2026-01-27 07:17:18] 2026-01-27 13:16:43,005 | INFO     | . payload execution = 3908 s
[2026-01-27 07:17:18] 2026-01-27 13:16:43,005 | INFO     | . stage-out = 0 s
[2026-01-27 07:17:18] 2026-01-27 13:16:43,005 | INFO     | . log creation = 0 s
[2026-01-27 07:17:18] 2026-01-27 13:16:43,005 | INFO     | ..............................
[2026-01-27 07:17:18] 2026-01-27 13:16:43,073 | INFO     | 
[2026-01-27 07:17:18] 2026-01-27 13:16:43,073 | INFO     | job summary report
[2026-01-27 07:17:18] 2026-01-27 13:16:43,074 | INFO     | --------------------------------------------------
[2026-01-27 07:17:18] 2026-01-27 13:16:43,074 | INFO     | PanDA job id: 6983467735
[2026-01-27 07:17:18] 2026-01-27 13:16:43,074 | INFO     | task id: 48318034
[2026-01-27 07:17:18] 2026-01-27 13:16:43,074 | INFO     | errors: (none)
[2026-01-27 07:17:18] 2026-01-27 13:16:43,074 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-27 07:17:18] 2026-01-27 13:16:43,074 | INFO     | pilot state: finished 
[2026-01-27 07:17:18] 2026-01-27 13:16:43,074 | INFO     | transexitcode: 0
[2026-01-27 07:17:18] 2026-01-27 13:16:43,075 | INFO     | exeerrorcode: 0
[2026-01-27 07:17:18] 2026-01-27 13:16:43,075 | INFO     | exeerrordiag: 
[2026-01-27 07:17:18] 2026-01-27 13:16:43,076 | INFO     | exitcode: 0
[2026-01-27 07:17:18] 2026-01-27 13:16:43,076 | INFO     | exitmsg: OK
[2026-01-27 07:17:18] 2026-01-27 13:16:43,076 | INFO     | cpuconsumptiontime: 41932 s
[2026-01-27 07:17:18] 2026-01-27 13:16:43,076 | INFO     | nevents: 400
[2026-01-27 07:17:18] 2026-01-27 13:16:43,076 | INFO     | neventsw: 0
[2026-01-27 07:17:18] 2026-01-27 13:16:43,076 | INFO     | pid: 468573
[2026-01-27 07:17:18] 2026-01-27 13:16:43,077 | INFO     | pgrp: 468573
[2026-01-27 07:17:18] 2026-01-27 13:16:43,077 | INFO     | corecount: 12
[2026-01-27 07:17:18] 2026-01-27 13:16:43,077 | INFO     | event service: False
[2026-01-27 07:17:18] 2026-01-27 13:16:43,077 | INFO     | sizes: {0: 2283773, 1: 2284234, 12: 2284234, 3918: 2310084, 3919: 2319096, 3922: 2319152, 3924: 2319474}
[2026-01-27 07:17:18] 2026-01-27 13:16:43,077 | INFO     | --------------------------------------------------
[2026-01-27 07:17:18] 2026-01-27 13:16:43,077 | INFO     | 
[2026-01-27 07:17:18] 2026-01-27 13:16:43,078 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/3
[2026-01-27 07:17:18] 2026-01-27 13:16:43,104 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-27 07:17:18] 2026-01-27 13:16:43,104 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-27 07:17:18] 2026-01-27 13:16:43,104 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-27 07:17:18] 2026-01-27 13:16:43,104 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-27 07:17:18] 2026-01-27 13:16:43,105 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-27 07:17:18] 2026-01-27 13:16:43,105 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-27 07:17:18] 2026-01-27 13:16:43,105 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-27 07:17:18] 2026-01-27 13:16:43,105 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-27 07:17:18] 2026-01-27 13:16:43,105 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-27 07:17:18] 2026-01-27 13:16:43,105 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-27 07:17:18] 2026-01-27 13:16:43,105 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-27 07:17:18] 2026-01-27 13:16:43,105 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-27 07:17:18] 2026-01-27 13:16:43,106 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-27 07:17:18] 2026-01-27 13:16:43,106 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-27 07:17:18] 2026-01-27 13:16:43,106 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-27 07:17:18] 2026-01-27 13:16:43,106 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-27 07:17:18] 2026-01-27 13:16:43,106 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-27 07:17:18] 2026-01-27 13:16:43,106 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-27 07:17:18] 2026-01-27 13:16:43,106 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-27 07:17:18] 2026-01-27 13:16:43,107 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-27 07:17:18] 2026-01-27 13:16:43,107 | INFO     | job 6983467735 has completed (purged errors)
[2026-01-27 07:17:18] 2026-01-27 13:16:43,107 | INFO     | overall cleanup function is called
[2026-01-27 07:17:18] 2026-01-27 13:16:44,116 | INFO     | --- collectZombieJob: --- 10, [468573]
[2026-01-27 07:17:18] 2026-01-27 13:16:44,116 | INFO     | zombie collector waiting for pid 468573
[2026-01-27 07:17:18] 2026-01-27 13:16:44,116 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 07:17:18] 2026-01-27 13:16:44,117 | INFO     | collected zombie processes
[2026-01-27 07:17:18] 2026-01-27 13:16:44,117 | INFO     | will attempt to kill all subprocesses of pid=468573
[2026-01-27 07:17:18] 2026-01-27 13:16:44,461 | INFO     | process IDs to be killed: [468573] (in reverse order)
[2026-01-27 07:17:18] 2026-01-27 13:16:44,576 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 07:17:18] 2026-01-27 13:16:44,576 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 07:17:18] 2026-01-27 13:16:44,586 | INFO     | did not find any defunct processes belonging to 468573
[2026-01-27 07:17:18] 2026-01-27 13:16:44,595 | INFO     | did not find any defunct processes belonging to 468573
[2026-01-27 07:17:18] 2026-01-27 13:16:44,595 | INFO     | ready for new job
[2026-01-27 07:17:18] 2026-01-27 13:16:44,596 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 07:17:18] 2026-01-27 13:16:44,597 | INFO     | **************************************
[2026-01-27 07:17:18] 2026-01-27 13:16:44,598 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 07:17:18] 2026-01-27 13:16:44,598 | INFO     | **************************************
[2026-01-27 07:17:18] 2026-01-27 13:16:44,598 | INFO     | 
[2026-01-27 07:17:18] 2026-01-27 13:16:44,603 | INFO     | architecture information:
[2026-01-27 07:17:18] 2026-01-27 13:16:44,604 | INFO     | executing command: cat /etc/os-release
[2026-01-27 07:17:18] 2026-01-27 13:16:44,619 | INFO     | cat /etc/os-release:
[2026-01-27 07:17:18] NAME="CentOS Linux"
[2026-01-27 07:17:18] VERSION="7 (Core)"
[2026-01-27 07:17:18] ID="centos"
[2026-01-27 07:17:18] ID_LIKE="rhel fedora"
[2026-01-27 07:17:18] VERSION_ID="7"
[2026-01-27 07:17:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 07:17:18] ANSI_COLOR="0;31"
[2026-01-27 07:17:18] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 07:17:18] HOME_URL="https://www.centos.org/"
[2026-01-27 07:17:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 07:17:18] 
[2026-01-27 07:17:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 07:17:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 07:17:18] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 07:17:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 07:17:18] 
[2026-01-27 07:17:18] 2026-01-27 13:16:44,619 | INFO     | **************************************
[2026-01-27 07:17:18] 2026-01-27 13:16:45,122 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/3
[2026-01-27 07:17:18] 2026-01-27 13:16:45,142 | INFO     | sufficient remaining disk space (1786729463808 B)
[2026-01-27 07:17:18] 2026-01-27 13:16:45,142 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 07:17:18] 2026-01-27 13:16:45,142 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 07:17:18] 2026-01-27 13:16:45,142 | INFO     | update_server=False
[2026-01-27 07:17:18] 2026-01-27 13:16:45,143 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 07:17:18] 2026-01-27 13:16:45,143 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 07:17:18] 2026-01-27 13:16:45,143 | INFO     | aborting loop
[2026-01-27 07:17:18] 2026-01-27 13:16:45,554 | INFO     | all data control threads have been joined
[2026-01-27 07:17:18] 2026-01-27 13:16:46,148 | INFO     | [job] retrieve thread has finished
[2026-01-27 07:17:18] 2026-01-27 13:16:46,149 | INFO     | [job] job monitor thread has finished
[2026-01-27 07:17:18] 2026-01-27 13:16:46,378 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 07:17:18] 2026-01-27 13:16:46,402 | INFO     | [job] validate thread has finished
[2026-01-27 07:17:18] 2026-01-27 13:16:46,417 | INFO     | all payload control threads have been joined
[2026-01-27 07:17:18] 2026-01-27 13:16:46,559 | INFO     | [data] control thread has finished
[2026-01-27 07:17:18] 2026-01-27 13:16:46,649 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 07:17:18] 2026-01-27 13:16:46,652 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 07:17:18] 2026-01-27 13:16:46,779 | INFO     | [payload] failed_post thread has finished
[2026-01-27 07:17:18] 2026-01-27 13:16:46,799 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 07:17:18] 2026-01-27 13:16:46,800 | INFO     | all job control threads have been joined
[2026-01-27 07:17:18] 2026-01-27 13:16:46,812 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 07:17:18] 2026-01-27 13:16:47,067 | INFO     | [data] copytool_in thread has finished
[2026-01-27 07:17:18] 2026-01-27 13:16:47,400 | INFO     | [payload] validate_post thread has finished
[2026-01-27 07:17:18] 2026-01-27 13:16:47,422 | INFO     | [payload] control thread has finished
[2026-01-27 07:17:18] 2026-01-27 13:16:47,805 | INFO     | [job] control thread has finished
[2026-01-27 07:17:18] 2026-01-27 13:16:48,084 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 07:17:18] 2026-01-27 13:16:48,383 | INFO     | [data] copytool_out thread has finished
[2026-01-27 07:17:18] 2026-01-27 13:16:49,089 | INFO     | [job] queue monitor thread has finished
[2026-01-27 07:17:18] 2026-01-27 13:16:50,804 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 07:17:18] 2026-01-27 13:16:56,149 | INFO     | job.realtimelogging is not enabled
[2026-01-27 07:17:18] 2026-01-27 13:16:57,154 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 07:17:18] 2026-01-27 13:17:12,121 | INFO     | [monitor] cgroup control has ended
[2026-01-27 07:17:18] 2026-01-27 13:17:13,672 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 124987311167296)>', '<ExcThread(monitor, started 124986635319040)>']
[2026-01-27 07:17:18] 2026-01-27 13:17:15,104 | INFO     | PID=463720 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-27 07:17:18] 2026-01-27 13:17:15,104 | INFO     | .. there are 5 such processes running
[2026-01-27 07:17:18] 2026-01-27 13:17:15,104 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 07:17:18] 2026-01-27 13:17:15,104 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 07:17:18] 2026-01-27 13:17:15,105 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 07:17:18] 2026-01-27 13:17:15,105 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 07:17:18] 2026-01-27 13:17:15,105 | INFO     | [monitor] control thread has ended
[2026-01-27 07:17:18] 2026-01-27 13:17:18,697 | INFO     | all workflow threads have been joined
[2026-01-27 07:17:18] 2026-01-27 13:17:18,697 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 07:17:18] 2026-01-27 13:17:18,698 | INFO     | traces error code: 0
[2026-01-27 07:17:18] 2026-01-27 13:17:18,698 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 07:17:18] 2026-01-27 13:17:18,818 [wrapper] ==== pilot stdout END ====
[2026-01-27 07:17:18] 2026-01-27 13:17:18,821 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 07:17:18] 2026-01-27 13:17:18,825 [wrapper] pilotpid: 463720
[2026-01-27 07:17:18] 2026-01-27 13:17:18,828 [wrapper] Pilot exit status: 0
[2026-01-27 07:17:18] 2026-01-27 13:17:18,839 [wrapper] pandaids: 6983467735
[2026-01-27 07:17:18] 2026-01-27 13:17:18,899 [wrapper] cleanup supervisor_pilot  532516 463721
[2026-01-27 07:17:18] 2026-01-27 13:17:18,902 [wrapper] Test setup, not cleaning
[2026-01-27 07:17:18] 2026-01-27 13:17:18,906 [wrapper] apfmon messages muted
[2026-01-27 07:17:18] 2026-01-27 13:17:18,909 [wrapper] ==== wrapper stdout END ====
[2026-01-27 07:17:18] 2026-01-27 13:17:18,911 [wrapper] ==== wrapper stderr END ====
[2026-01-27 07:17:18]  *** Error codes and diagnostics ***
[2026-01-27 07:17:18]     "exeErrorCode": 0,
[2026-01-27 07:17:18]     "exeErrorDiag": "",
[2026-01-27 07:17:18]     "pilotErrorCode": 0,
[2026-01-27 07:17:18]     "pilotErrorDiag": "",
[2026-01-27 07:17:18]  *** Listing of results directory ***
[2026-01-27 07:17:18] total 666980
[2026-01-27 07:17:18] -rw-r--r-- 1 mark mark    584422 Jan 25 16:54 pilot3.tar.gz
[2026-01-27 07:17:18] -rw-r--r-- 1 mark mark      5111 Jan 25 16:54 queuedata.json
[2026-01-27 07:17:18] -rwx------ 1 mark mark     36322 Jan 25 16:54 runpilot2-wrapper.sh
[2026-01-27 07:17:18] -rw-rw-r-- 1 mark mark       100 Jan 27 06:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 07:17:18] -rwxr-xr-x 1 mark mark      7986 Jan 27 06:10 run_atlas
[2026-01-27 07:17:18] -rw-rw-r-- 1 mark mark       105 Jan 27 06:10 job.xml
[2026-01-27 07:17:18] -rw-r--r-- 2 mark mark 493821854 Jan 27 06:10 EVNT.48318032._000040.pool.root.1
[2026-01-27 07:17:18] drwxrwx--x 2 mark mark      4096 Jan 27 06:10 shared
[2026-01-27 07:17:18] -rw-r--r-- 2 mark mark    597761 Jan 27 06:10 input.tar.gz
[2026-01-27 07:17:18] -rw-r--r-- 2 mark mark     15845 Jan 27 06:10 start_atlas.sh
[2026-01-27 07:17:18] -rw-rw-r-- 1 mark mark      9265 Jan 27 06:10 init_data.xml
[2026-01-27 07:17:18] -rw-rw-r-- 1 mark mark         0 Jan 27 06:10 boinc_setup_complete
[2026-01-27 07:17:18] -rw-rw-r-- 1 mark mark         0 Jan 27 06:10 boinc_lockfile
[2026-01-27 07:17:18] -rw-rw-r-- 1 mark mark      2532 Jan 27 06:10 pandaJob.out
[2026-01-27 07:17:18] -rw------- 1 mark mark   1002853 Jan 27 06:10 agis_schedconf.cvmfs.json
[2026-01-27 07:17:18] -rw------- 1 mark mark   1516246 Jan 27 06:11 agis_ddmendpoints.agis.ALL.json
[2026-01-27 07:17:18] -rw------- 1 mark mark       432 Jan 27 06:11 workernode_map.json
[2026-01-27 07:17:18] drwx------ 5 mark mark      4096 Jan 27 06:11 pilot3
[2026-01-27 07:17:18] -rw-rw-r-- 1 mark mark       530 Jan 27 07:16 boinc_task_state.xml
[2026-01-27 07:17:18] -rw------- 1 mark mark 183272652 Jan 27 07:16 HITS.48318034._001773.pool.root.1
[2026-01-27 07:17:18] -rw------- 1 mark mark        95 Jan 27 07:16 pilot_heartbeat.json
[2026-01-27 07:17:18] -rw------- 1 mark mark      1033 Jan 27 07:16 memory_monitor_summary.json
[2026-01-27 07:17:18] -rw------- 1 mark mark    389439 Jan 27 07:16 log.48318034._001773.job.log.tgz.1
[2026-01-27 07:17:18] -rw------- 1 mark mark      6339 Jan 27 07:16 heartbeat.json
[2026-01-27 07:17:18] -rw-rw-r-- 1 mark mark      8192 Jan 27 07:17 boinc_mmap_file
[2026-01-27 07:17:18] -rw-rw-r-- 1 mark mark        27 Jan 27 07:17 wrapper_checkpoint.txt
[2026-01-27 07:17:18] -rw------- 1 mark mark      4899 Jan 27 07:17 pilotlog.txt
[2026-01-27 07:17:18] -rw------- 1 mark mark    586010 Jan 27 07:17 log.48318034._001773.job.log.1
[2026-01-27 07:17:18] -rw------- 1 mark mark       357 Jan 27 07:17 output.list
[2026-01-27 07:17:18] -rw-rw-r-- 1 mark mark       620 Jan 27 07:17 runtime_log
[2026-01-27 07:17:18] -rw------- 1 mark mark    993280 Jan 27 07:17 result.tar.gz
[2026-01-27 07:17:18] -rw-rw-r-- 1 mark mark      8886 Jan 27 07:17 runtime_log.err
[2026-01-27 07:17:18] -rw------- 1 mark mark       645 Jan 27 07:17 iCpNDmEBO48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmHx1KDm3CkZnn.diag
[2026-01-27 07:17:18] -rw-rw-r-- 1 mark mark     21548 Jan 27 07:17 stderr.txt
[2026-01-27 07:17:19] HITS file was successfully produced:
[2026-01-27 07:17:19] -rw------- 1 mark mark 183272652 Jan 27 07:16 shared/HITS.pool.root.1
[2026-01-27 07:17:19]  *** Contents of shared directory: ***
[2026-01-27 07:17:19] total 662804
[2026-01-27 07:17:19] -rw-r--r-- 2 mark mark 493821854 Jan 27 06:10 ATLAS.root_0
[2026-01-27 07:17:19] -rw-r--r-- 2 mark mark    597761 Jan 27 06:10 input.tar.gz
[2026-01-27 07:17:19] -rw-r--r-- 2 mark mark     15845 Jan 27 06:10 start_atlas.sh
[2026-01-27 07:17:19] -rw------- 1 mark mark 183272652 Jan 27 07:16 HITS.pool.root.1
[2026-01-27 07:17:19] -rw------- 1 mark mark    993280 Jan 27 07:17 result.tar.gz
07:17:21 (459311): run_atlas exited; CPU time 42100.142356
07:17:21 (459311): called boinc_finish(0)

</stderr_txt>
]]>

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