Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
19:12:00 (1322140): wrapper (7.7.26015): starting
19:12:00 (1322140): wrapper: running run_atlas (--nthreads 3)
[2026-01-27 19:12:00] Arguments: --nthreads 3
[2026-01-27 19:12:00] Threads: 3
[2026-01-27 19:12:00] Checking for CVMFS
[2026-01-27 19:12:00] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-27 19:12:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-27 19:12:01] Running cvmfs_config stat atlas.cern.ch
[2026-01-27 19:12:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-27 19:12:01] 2.9.2.0 3955128 10141 91464 155594 2 50 16513533 36864000 0 130560 0 4446753 99.986 331652 6212 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-27 19:12:01] CVMFS is ok
[2026-01-27 19:12:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-27 19:12:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-27 19:12:01] Further information can be found at the LHC@home message board.
[2026-01-27 19:12:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-27 19:12:01] Checking for apptainer binary...
[2026-01-27 19:12:01] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-27 19:12:01] Running /usr/bin/apptainer --version
[2026-01-27 19:12:01] apptainer version 1.4.1-1.1
[2026-01-27 19:12:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-27 19:12:01] thA332
[2026-01-27 19:12:01] apptainer works
[2026-01-27 19:12:01] Set ATHENA_PROC_NUMBER=3
[2026-01-27 19:12:01] Set ATHENA_CORE_NUMBER=3
[2026-01-27 19:12:01] Starting ATLAS job with PandaID=6983770863
[2026-01-27 19:12:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 20:29:20]  *** The last 200 lines of the pilot log: ***
[2026-01-27 20:29:20] HOME_URL="https://www.centos.org/"
[2026-01-27 20:29:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 20:29:20] 
[2026-01-27 20:29:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 20:29:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 20:29:20] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 20:29:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 20:29:20] 
[2026-01-27 20:29:20] 2026-01-27 19:28:16,169 | INFO     | **************************************
[2026-01-27 20:29:20] 2026-01-27 19:28:16,672 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-27 20:29:20] 2026-01-27 19:28:16,684 | INFO     | sufficient remaining disk space (244258439168 B)
[2026-01-27 20:29:20] 2026-01-27 19:28:16,685 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 20:29:20] 2026-01-27 19:28:16,685 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 20:29:20] 2026-01-27 19:28:16,685 | INFO     | update_server=False
[2026-01-27 20:29:20] 2026-01-27 19:28:16,685 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 20:29:20] 2026-01-27 19:28:16,685 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 20:29:20] 2026-01-27 19:28:16,685 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 20:29:20] 2026-01-27 19:28:17,108 | INFO     | all data control threads have been joined
[2026-01-27 20:29:20] 2026-01-27 19:28:17,274 | INFO     | all payload control threads have been joined
[2026-01-27 20:29:20] 2026-01-27 19:28:17,634 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 20:29:20] 2026-01-27 19:28:17,690 | INFO     | [job] retrieve thread has finished
[2026-01-27 20:29:20] 2026-01-27 19:28:17,691 | INFO     | [job] queue monitor thread has finished
[2026-01-27 20:29:20] 2026-01-27 19:28:17,812 | INFO     | all job control threads have been joined
[2026-01-27 20:29:20] 2026-01-27 19:28:18,009 | WARNING  | process 1330601 can no longer be monitored (due to stat problems) - aborting
[2026-01-27 20:29:20] 2026-01-27 19:28:18,039 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 20:29:20] 2026-01-27 19:28:18,039 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 20:29:20] 2026-01-27 19:28:18,039 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-01-27 20:29:20] 2026-01-27 19:28:18,039 | WARNING  | maxPSS not found in memory monitor output
[2026-01-27 20:29:20] 2026-01-27 19:28:18,039 | INFO     | skipping file size check of payload stdout file (/local/data/boinc/slots/0/PanDA_Pilot-6983770863/payload.stdout) since it has not been created yet
[2026-01-27 20:29:20] 2026-01-27 19:28:18,039 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-27 20:29:20] 2026-01-27 19:28:18,049 | INFO     | sufficient remaining disk space (244258439168 B)
[2026-01-27 20:29:20] 2026-01-27 19:28:18,050 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-01-27 20:29:20] 2026-01-27 19:28:18,050 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-6983770863/HITS.48310826._010470.pool.root.1 since it does not exist
[2026-01-27 20:29:20] 2026-01-27 19:28:18,089 | INFO     | number of running child processes to parent process 1330601: 1
[2026-01-27 20:29:20] 2026-01-27 19:28:18,089 | INFO     | maximum number of monitored processes: 6
[2026-01-27 20:29:20] 2026-01-27 19:28:18,089 | INFO     | aborting job monitoring since job object (job id=6983770863) has expired
[2026-01-27 20:29:20] 2026-01-27 19:28:18,089 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 20:29:20] 2026-01-27 19:28:18,089 | INFO     | will abort loop
[2026-01-27 20:29:20] 2026-01-27 19:28:18,113 | INFO     | [data] control thread has finished
[2026-01-27 20:29:20] 2026-01-27 19:28:18,239 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 20:29:20] 2026-01-27 19:28:18,279 | INFO     | [payload] control thread has finished
[2026-01-27 20:29:20] 2026-01-27 19:28:18,385 | INFO     | [job] validate thread has finished
[2026-01-27 20:29:20] 2026-01-27 19:28:18,457 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 20:29:20] 2026-01-27 19:28:18,465 | INFO     | [payload] validate_post thread has finished
[2026-01-27 20:29:20] 2026-01-27 19:28:18,479 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 20:29:20] 2026-01-27 19:28:18,485 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 20:29:20] 2026-01-27 19:28:18,644 | INFO     | [data] copytool_in thread has finished
[2026-01-27 20:29:20] 2026-01-27 19:28:18,662 | INFO     | [payload] failed_post thread has finished
[2026-01-27 20:29:20] 2026-01-27 19:28:18,818 | INFO     | [job] control thread has finished
[2026-01-27 20:29:20] 2026-01-27 19:28:19,094 | INFO     | [job] job monitor thread has finished
[2026-01-27 20:29:20] 2026-01-27 19:28:19,640 | INFO     | [data] copytool_out thread has finished
[2026-01-27 20:29:20] 2026-01-27 19:28:20,692 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 20:29:20] 2026-01-27 19:28:47,340 | INFO     | PID=1326178 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-27 20:29:20] 2026-01-27 19:28:47,340 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 20:29:20] 2026-01-27 19:28:47,340 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 20:29:20] 2026-01-27 19:28:47,340 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 20:29:20] 2026-01-27 19:29:15,263 | INFO     | [monitor] cgroup control has ended
[2026-01-27 20:29:20] 2026-01-27 19:29:15,576 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140279491086144)>', '<ExcThread(monitor, started 140278857983744)>']
[2026-01-27 20:29:20] 2026-01-27 19:29:16,488 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 20:29:20] 2026-01-27 19:29:16,489 | INFO     | [monitor] control thread has ended
[2026-01-27 20:29:20] 2026-01-27 19:29:20,601 | INFO     | all workflow threads have been joined
[2026-01-27 20:29:20] 2026-01-27 19:29:20,602 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 20:29:20] 2026-01-27 19:29:20,602 | INFO     | traces error code: 0
[2026-01-27 20:29:20] 2026-01-27 19:29:20,602 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 20:29:20] 2026-01-27 19:29:20,653 [wrapper] ==== pilot stdout END ====
[2026-01-27 20:29:20] 2026-01-27 19:29:20,655 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 20:29:20] 2026-01-27 19:29:20,657 [wrapper] pilotpid: 1326178
[2026-01-27 20:29:20] 2026-01-27 19:29:20,659 [wrapper] Pilot exit status: 0
[2026-01-27 20:29:20] 2026-01-27 19:29:20,667 [wrapper] pandaids: 6983770863
[2026-01-27 20:29:20] 2026-01-27 19:29:20,683 [wrapper] cleanup supervisor_pilot 1335889 1326179
[2026-01-27 20:29:20] 2026-01-27 19:29:20,685 [wrapper] Test setup, not cleaning
[2026-01-27 20:29:20] 2026-01-27 19:29:20,687 [wrapper] apfmon messages muted
[2026-01-27 20:29:20] 2026-01-27 19:29:20,690 [wrapper] ==== wrapper stdout END ====
[2026-01-27 20:29:20] 2026-01-27 19:29:20,692 [wrapper] ==== wrapper stderr END ====
[2026-01-27 20:29:20]  *** Error codes and diagnostics ***
[2026-01-27 20:29:20]     "exeErrorCode": 0,
[2026-01-27 20:29:20]     "exeErrorDiag": "",
[2026-01-27 20:29:20]     "pilotErrorCode": 0,
[2026-01-27 20:29:20]     "pilotErrorDiag": "",
[2026-01-27 20:29:20]  *** Listing of results directory ***
[2026-01-27 20:29:20] total 666752
[2026-01-27 20:29:20] -rw-r--r-- 1 boinc boinc      5111 Jan 26 02:12 queuedata.json
[2026-01-27 20:29:20] -rw-r--r-- 1 boinc boinc    584422 Jan 26 02:12 pilot3.tar.gz
[2026-01-27 20:29:20] -rwx------ 1 boinc boinc     36322 Jan 26 02:12 runpilot2-wrapper.sh
[2026-01-27 20:29:20] -rw-r--r-- 1 boinc boinc       100 Jan 27 19:12 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 20:29:20] -rwxr-xr-x 1 boinc boinc      7986 Jan 27 19:12 run_atlas
[2026-01-27 20:29:20] -rw-r--r-- 1 boinc boinc       105 Jan 27 19:12 job.xml
[2026-01-27 20:29:20] -rw-r--r-- 2 boinc boinc 496552783 Jan 27 19:12 EVNT.48310824._000131.pool.root.1
[2026-01-27 20:29:20] -rw-r--r-- 2 boinc boinc    597766 Jan 27 19:12 input.tar.gz
[2026-01-27 20:29:20] -rw-r--r-- 2 boinc boinc     15845 Jan 27 19:12 start_atlas.sh
[2026-01-27 20:29:20] drwxrwx--x 2 boinc boinc      4096 Jan 27 19:12 shared
[2026-01-27 20:29:20] -rw-r--r-- 1 boinc boinc         0 Jan 27 19:12 boinc_setup_complete
[2026-01-27 20:29:20] -rw-r--r-- 1 boinc boinc      6439 Jan 27 19:12 init_data.xml
[2026-01-27 20:29:20] -rw-r--r-- 1 boinc boinc         0 Jan 27 19:12 boinc_lockfile
[2026-01-27 20:29:20] -rw-r--r-- 1 boinc boinc      2523 Jan 27 19:12 pandaJob.out
[2026-01-27 20:29:20] -rw------- 1 boinc boinc   1005228 Jan 27 19:12 agis_schedconf.cvmfs.json
[2026-01-27 20:29:20] -rw------- 1 boinc boinc   1516246 Jan 27 19:12 agis_ddmendpoints.agis.ALL.json
[2026-01-27 20:29:20] -rw------- 1 boinc boinc       427 Jan 27 19:12 workernode_map.json
[2026-01-27 20:29:20] drwx------ 5 boinc boinc      4096 Jan 27 19:12 pilot3
[2026-01-27 20:29:20] -rw------- 1 boinc boinc 180353967 Jan 27 20:27 HITS.48310826._010470.pool.root.1
[2026-01-27 20:29:20] -rw-r--r-- 1 boinc boinc       530 Jan 27 20:27 boinc_task_state.xml
[2026-01-27 20:29:20] -rw------- 1 boinc boinc      1015 Jan 27 20:28 memory_monitor_summary.json
[2026-01-27 20:29:20] -rw------- 1 boinc boinc    286999 Jan 27 20:28 log.48310826._010470.job.log.tgz.1
[2026-01-27 20:29:20] -rw------- 1 boinc boinc      6303 Jan 27 20:28 heartbeat.json
[2026-01-27 20:29:20] -rw------- 1 boinc boinc        95 Jan 27 20:28 pilot_heartbeat.json
[2026-01-27 20:29:20] -rw-r--r-- 1 boinc boinc        27 Jan 27 20:28 wrapper_checkpoint.txt
[2026-01-27 20:29:20] -rw-r--r-- 1 boinc boinc      8192 Jan 27 20:28 boinc_mmap_file
[2026-01-27 20:29:20] -rw------- 1 boinc boinc      6249 Jan 27 20:29 pilotlog.txt
[2026-01-27 20:29:20] -rw------- 1 boinc boinc    673255 Jan 27 20:29 log.48310826._010470.job.log.1
[2026-01-27 20:29:20] -rw------- 1 boinc boinc       357 Jan 27 20:29 output.list
[2026-01-27 20:29:20] -rw-r--r-- 1 boinc boinc       620 Jan 27 20:29 runtime_log
[2026-01-27 20:29:20] -rw------- 1 boinc boinc    972800 Jan 27 20:29 result.tar.gz
[2026-01-27 20:29:20] -rw-r--r-- 1 boinc boinc      8896 Jan 27 20:29 runtime_log.err
[2026-01-27 20:29:20] -rw------- 1 boinc boinc       657 Jan 27 20:29 LDlLDmTKQ48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmsg8KDmrh2V9n.diag
[2026-01-27 20:29:20] -rw-r--r-- 1 boinc boinc     10142 Jan 27 20:29 stderr.txt
[2026-01-27 20:29:20] HITS file was successfully produced:
[2026-01-27 20:29:20] -rw------- 1 boinc boinc 180353967 Jan 27 20:27 shared/HITS.pool.root.1
[2026-01-27 20:29:20]  *** Contents of shared directory: ***
[2026-01-27 20:29:20] total 662604
[2026-01-27 20:29:20] -rw-r--r-- 2 boinc boinc 496552783 Jan 27 19:12 ATLAS.root_0
[2026-01-27 20:29:20] -rw-r--r-- 2 boinc boinc    597766 Jan 27 19:12 input.tar.gz
[2026-01-27 20:29:20] -rw-r--r-- 2 boinc boinc     15845 Jan 27 19:12 start_atlas.sh
[2026-01-27 20:29:20] -rw------- 1 boinc boinc 180353967 Jan 27 20:27 HITS.pool.root.1
[2026-01-27 20:29:20] -rw------- 1 boinc boinc    972800 Jan 27 20:29 result.tar.gz
20:29:21 (1322140): run_atlas exited; CPU time 12988.749190
20:29:21 (1322140): called boinc_finish(0)

</stderr_txt>
]]>

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