Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:39:13 (1570393): wrapper (7.7.26015): starting
21:39:13 (1570393): wrapper: running run_atlas (--nthreads 8)
[2026-01-26 21:39:13] Arguments: --nthreads 8
[2026-01-26 21:39:13] Threads: 8
[2026-01-26 21:39:13] Checking for CVMFS
[2026-01-26 21:39:13] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 21:39:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 21:39:13] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 21:39:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 21:39:13] 2.13.3.0 10954 118739 402104 155569 2 514 22670048 32935937 16634 16776704 26 405238401 99.476 590957404 38649 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-26 21:39:13] CVMFS is ok
[2026-01-26 21:39:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 21:39:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 21:39:13] Further information can be found at the LHC@home message board.
[2026-01-26 21:39:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 21:39:13] Checking for apptainer binary...
[2026-01-26 21:39:13] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 21:39:13] Running /usr/bin/apptainer --version
[2026-01-26 21:39:14] apptainer version 1.4.5-2.el9
[2026-01-26 21:39:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 21:39:14] c7-11-13.aglt2.org
[2026-01-26 21:39:14] apptainer works
[2026-01-26 21:39:14] Set ATHENA_PROC_NUMBER=8
[2026-01-26 21:39:14] Set ATHENA_CORE_NUMBER=8
[2026-01-26 21:39:14] Starting ATLAS job with PandaID=6982978456
[2026-01-26 21:39:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 23:58:23]  *** The last 200 lines of the pilot log: ***
[2026-01-26 23:58:23]  mtime=0
[2026-01-26 23:58:23]  protocol_id=None
[2026-01-26 23:58:23]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-26 23:58:23]  replicas=None
[2026-01-26 23:58:23]  scope=mc23_13p6TeV
[2026-01-26 23:58:23]  status=None
[2026-01-26 23:58:23]  status_code=0
[2026-01-26 23:58:23]  storage_token=
[2026-01-26 23:58:23]  surl=/tmp/boinchome/slots/3/PanDA_Pilot-6982978456/log.48310724._008475.job.log.tgz.1
[2026-01-26 23:58:23]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3d/c0/log.48310724._008475.job.log.tgz.1
[2026-01-26 23:58:23]  workdir=None
[2026-01-26 23:58:23] ]
[2026-01-26 23:58:23] 2026-01-27 04:06:46,186 | INFO     | transferring file log.48310724._008475.job.log.tgz.1 from /tmp/boinchome/slots/3/PanDA_Pilot-6982978456/log.48310724._008475.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-26 23:58:23] 2026-01-27 04:06:46,186 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/3/PanDA_Pilot-6982978456/log.48310724._008475.job.log.tgz.1 /tmp/boinchome/slots/3/log.48310724._008475.job
[2026-01-26 23:58:23] 2026-01-27 04:06:46,212 | INFO     | adding to output.list: log.48310724._008475.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3d/c0/log.48310724._008475.job.log.tg
[2026-01-26 23:58:23] 2026-01-27 04:06:46,213 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-26 23:58:23] 2026-01-27 04:06:46,213 | INFO     | summary of transferred files:
[2026-01-26 23:58:23] 2026-01-27 04:06:46,213 | INFO     |  -- lfn=log.48310724._008475.job.log.tgz.1, status_code=0, status=transferred
[2026-01-26 23:58:23] 2026-01-27 04:06:46,213 | INFO     | stage-out finished correctly
[2026-01-26 23:58:23] 2026-01-27 04:06:46,301 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-26 23:58:23] 2026-01-27 04:06:46,379 | INFO     | job 6982978456 has state=finished
[2026-01-26 23:58:23] 2026-01-27 04:06:46,379 | INFO     | preparing for final server update for job 6982978456 in state='finished'
[2026-01-26 23:58:23] 2026-01-27 04:06:46,379 | INFO     | reading metadata from: /tmp/boinchome/slots/3/PanDA_Pilot-6982978456/jobReport.json
[2026-01-26 23:58:23] 2026-01-27 04:06:46,381 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/3/workernode_map.json
[2026-01-26 23:58:23] 2026-01-27 04:06:46,382 | INFO     | this job has now completed (state=finished)
[2026-01-26 23:58:23] 2026-01-27 04:06:46,382 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-26 23:58:23] 2026-01-27 04:06:46,382 | INFO     | log transfer has been attempted: DONE
[2026-01-26 23:58:23] 2026-01-27 04:06:46,382 | INFO     | job 6982978456 has finished - writing final server update
[2026-01-26 23:58:23] 2026-01-27 04:06:46,382 | INFO     | total number of processed events: 400 (read)
[2026-01-26 23:58:23] 2026-01-27 04:06:46,392 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6982978456/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 23:58:23] 2026-01-27 04:06:46,393 | INFO     | extracted standard info from prmon json
[2026-01-26 23:58:23] 2026-01-27 04:06:46,393 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 23:58:23] 2026-01-27 04:06:46,393 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 23:58:23] 2026-01-27 04:06:46,394 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 23:58:23] 2026-01-27 04:06:46,394 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 23:58:23] 2026-01-27 04:06:46,395 | INFO     | fitting pss+swap vs Time
[2026-01-26 23:58:23] 2026-01-27 04:06:46,395 | INFO     | sum of square deviations: 152978752.8860762
[2026-01-26 23:58:23] 2026-01-27 04:06:46,396 | INFO     | sum of deviations: -14182827772.556955
[2026-01-26 23:58:23] 2026-01-27 04:06:46,396 | INFO     | mean x: 1769484286.9620254
[2026-01-26 23:58:23] 2026-01-27 04:06:46,396 | INFO     | mean y: 2630518.481012658
[2026-01-26 23:58:23] 2026-01-27 04:06:46,396 | INFO     | intersect: 164053457282.09995
[2026-01-26 23:58:23] 2026-01-27 04:06:46,396 | INFO     | chi2: 0.14799894424615384
[2026-01-26 23:58:23] 2026-01-27 04:06:46,396 | INFO     | current memory leak: -92.71 B/s (using 79 data points, chi2=0.15)
[2026-01-26 23:58:23] 2026-01-27 04:06:46,397 | INFO     | could have reported an average CPU frequency of 3293 MHz (6 samples)
[2026-01-26 23:58:23] 2026-01-27 04:06:46,397 | INFO     | ..............................
[2026-01-26 23:58:23] 2026-01-27 04:06:46,397 | INFO     | . Timing measurements:
[2026-01-26 23:58:23] 2026-01-27 04:06:46,397 | INFO     | . get job = 0 s
[2026-01-26 23:58:23] 2026-01-27 04:06:46,397 | INFO     | . initial setup = 9 s
[2026-01-26 23:58:23] 2026-01-27 04:06:46,397 | INFO     | . payload setup = 9 s
[2026-01-26 23:58:23] 2026-01-27 04:06:46,397 | INFO     | . stage-in = 0 s
[2026-01-26 23:58:23] 2026-01-27 04:06:46,397 | INFO     | . payload execution = 5207 s
[2026-01-26 23:58:23] 2026-01-27 04:06:46,397 | INFO     | . stage-out = 1 s
[2026-01-26 23:58:23] 2026-01-27 04:06:46,397 | INFO     | . log creation = 0 s
[2026-01-26 23:58:23] 2026-01-27 04:06:46,397 | INFO     | ..............................
[2026-01-26 23:58:23] 2026-01-27 04:06:46,474 | INFO     | 
[2026-01-26 23:58:23] 2026-01-27 04:06:46,474 | INFO     | job summary report
[2026-01-26 23:58:23] 2026-01-27 04:06:46,474 | INFO     | --------------------------------------------------
[2026-01-26 23:58:23] 2026-01-27 04:06:46,474 | INFO     | PanDA job id: 6982978456
[2026-01-26 23:58:23] 2026-01-27 04:06:46,474 | INFO     | task id: 48310724
[2026-01-26 23:58:23] 2026-01-27 04:06:46,474 | INFO     | errors: (none)
[2026-01-26 23:58:23] 2026-01-27 04:06:46,474 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 23:58:23] 2026-01-27 04:06:46,474 | INFO     | pilot state: finished 
[2026-01-26 23:58:23] 2026-01-27 04:06:46,474 | INFO     | transexitcode: 0
[2026-01-26 23:58:23] 2026-01-27 04:06:46,474 | INFO     | exeerrorcode: 0
[2026-01-26 23:58:23] 2026-01-27 04:06:46,474 | INFO     | exeerrordiag: 
[2026-01-26 23:58:23] 2026-01-27 04:06:46,475 | INFO     | exitcode: 0
[2026-01-26 23:58:23] 2026-01-27 04:06:46,475 | INFO     | exitmsg: OK
[2026-01-26 23:58:23] 2026-01-27 04:06:46,475 | INFO     | cpuconsumptiontime: 32007 s
[2026-01-26 23:58:23] 2026-01-27 04:06:46,475 | INFO     | nevents: 400
[2026-01-26 23:58:23] 2026-01-27 04:06:46,475 | INFO     | neventsw: 0
[2026-01-26 23:58:23] 2026-01-27 04:06:46,475 | INFO     | pid: 1585750
[2026-01-26 23:58:23] 2026-01-27 04:06:46,475 | INFO     | pgrp: 1585750
[2026-01-26 23:58:23] 2026-01-27 04:06:46,475 | INFO     | corecount: 8
[2026-01-26 23:58:23] 2026-01-27 04:06:46,475 | INFO     | event service: False
[2026-01-26 23:58:23] 2026-01-27 04:06:46,475 | INFO     | sizes: {0: 2283818, 1: 2284279, 12: 2284279, 5218: 2310732, 5220: 2319924}
[2026-01-26 23:58:23] 2026-01-27 04:06:46,475 | INFO     | --------------------------------------------------
[2026-01-26 23:58:23] 2026-01-27 04:06:46,475 | INFO     | 
[2026-01-26 23:58:23] 2026-01-27 04:06:46,475 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-26 23:58:23] 2026-01-27 04:06:46,499 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 23:58:23] 2026-01-27 04:06:46,500 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 23:58:23] 2026-01-27 04:06:46,500 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 23:58:23] 2026-01-27 04:06:46,500 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 23:58:23] 2026-01-27 04:06:46,500 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 23:58:23] 2026-01-27 04:06:46,500 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 23:58:23] 2026-01-27 04:06:46,500 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 23:58:23] 2026-01-27 04:06:46,500 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 23:58:23] 2026-01-27 04:06:46,500 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 23:58:23] 2026-01-27 04:06:46,500 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 23:58:23] 2026-01-27 04:06:46,500 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 23:58:23] 2026-01-27 04:06:46,501 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 23:58:23] 2026-01-27 04:06:46,501 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 23:58:23] 2026-01-27 04:06:46,501 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 23:58:23] 2026-01-27 04:06:46,501 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 23:58:23] 2026-01-27 04:06:46,501 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 23:58:23] 2026-01-27 04:06:46,501 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 23:58:23] 2026-01-27 04:06:46,501 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 23:58:23] 2026-01-27 04:06:46,501 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 23:58:23] 2026-01-27 04:06:46,501 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 23:58:23] 2026-01-27 04:06:46,501 | INFO     | job 6982978456 has completed (purged errors)
[2026-01-26 23:58:23] 2026-01-27 04:06:46,501 | INFO     | overall cleanup function is called
[2026-01-26 23:58:23] 2026-01-27 04:06:47,512 | INFO     | --- collectZombieJob: --- 10, [1585750]
[2026-01-26 23:58:23] 2026-01-27 04:06:47,512 | INFO     | zombie collector waiting for pid 1585750
[2026-01-26 23:58:23] 2026-01-27 04:06:47,513 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 23:58:23] 2026-01-27 04:06:47,513 | INFO     | collected zombie processes
[2026-01-26 23:58:23] 2026-01-27 04:06:47,513 | INFO     | will attempt to kill all subprocesses of pid=1585750
[2026-01-26 23:58:23] 2026-01-27 04:06:47,871 | INFO     | process IDs to be killed: [1585750] (in reverse order)
[2026-01-26 23:58:23] 2026-01-27 04:06:47,995 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 23:58:23] 2026-01-27 04:06:47,995 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 23:58:23] 2026-01-27 04:06:48,009 | INFO     | did not find any defunct processes belonging to 1585750
[2026-01-26 23:58:23] 2026-01-27 04:06:48,022 | INFO     | did not find any defunct processes belonging to 1585750
[2026-01-26 23:58:23] 2026-01-27 04:06:48,022 | INFO     | ready for new job
[2026-01-26 23:58:23] 2026-01-27 04:06:48,022 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 23:58:23] 2026-01-27 04:06:48,024 | INFO     | **************************************
[2026-01-26 23:58:23] 2026-01-27 04:06:48,024 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 23:58:23] 2026-01-27 04:06:48,024 | INFO     | **************************************
[2026-01-26 23:58:23] 2026-01-27 04:06:48,024 | INFO     | 
[2026-01-26 23:58:23] 2026-01-27 04:06:48,027 | INFO     | architecture information:
[2026-01-26 23:58:23] 2026-01-27 04:06:48,028 | INFO     | executing command: cat /etc/os-release
[2026-01-26 23:58:23] 2026-01-27 04:06:48,195 | INFO     | cat /etc/os-release:
[2026-01-26 23:58:23] NAME="CentOS Linux"
[2026-01-26 23:58:23] VERSION="7 (Core)"
[2026-01-26 23:58:23] ID="centos"
[2026-01-26 23:58:23] ID_LIKE="rhel fedora"
[2026-01-26 23:58:23] VERSION_ID="7"
[2026-01-26 23:58:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 23:58:23] ANSI_COLOR="0;31"
[2026-01-26 23:58:23] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 23:58:23] HOME_URL="https://www.centos.org/"
[2026-01-26 23:58:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 23:58:23] 
[2026-01-26 23:58:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 23:58:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 23:58:23] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 23:58:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 23:58:23] 
[2026-01-26 23:58:23] 2026-01-27 04:06:48,195 | INFO     | **************************************
[2026-01-26 23:58:23] 2026-01-27 04:06:48,700 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-26 23:58:23] 2026-01-27 04:06:48,723 | INFO     | sufficient remaining disk space (92179267584 B)
[2026-01-26 23:58:23] 2026-01-27 04:06:48,723 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 23:58:23] 2026-01-27 04:06:48,723 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 23:58:23] 2026-01-27 04:06:48,723 | INFO     | update_server=False
[2026-01-26 23:58:23] 2026-01-27 04:06:48,724 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 23:58:23] 2026-01-27 04:06:48,724 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 23:58:23] 2026-01-27 04:06:49,020 | INFO     | all data control threads have been joined
[2026-01-26 23:58:23] 2026-01-27 04:06:49,043 | INFO     | all payload control threads have been joined
[2026-01-26 23:58:23] 2026-01-27 04:06:49,298 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 23:58:23] 2026-01-27 04:06:49,721 | INFO     | all job control threads have been joined
[2026-01-26 23:58:23] 2026-01-27 04:06:49,730 | INFO     | [job] retrieve thread has finished
[2026-01-26 23:58:23] 2026-01-27 04:06:50,023 | INFO     | [data] control thread has finished
[2026-01-26 23:58:23] 2026-01-27 04:06:50,049 | INFO     | [payload] control thread has finished
[2026-01-26 23:58:23] 2026-01-27 04:06:50,299 | INFO     | [payload] validate_post thread has finished
[2026-01-26 23:58:23] 2026-01-27 04:06:50,332 | INFO     | [job] validate thread has finished
[2026-01-26 23:58:23] 2026-01-27 04:06:50,349 | INFO     | [data] copytool_in thread has finished
[2026-01-26 23:58:23] 2026-01-27 04:06:50,730 | INFO     | [job] control thread has finished
[2026-01-26 23:58:23] 2026-01-27 04:06:50,734 | INFO     | [payload] failed_post thread has finished
[2026-01-26 23:58:23] 2026-01-27 04:06:50,767 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 23:58:23] 2026-01-27 04:06:50,823 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 23:58:23] 2026-01-27 04:06:51,098 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 23:58:23] 2026-01-27 04:06:51,306 | INFO     | [data] copytool_out thread has finished
[2026-01-26 23:58:23] 2026-01-27 04:06:51,503 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 23:58:23] 2026-01-27 04:06:51,679 | WARNING  | process 1585750 can no longer be monitored (due to stat problems) - aborting
[2026-01-26 23:58:23] 2026-01-27 04:06:52,051 | INFO     | using path: /tmp/boinchome/slots/3/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 23:58:23] 2026-01-27 04:06:52,052 | INFO     | skipping file size check of payload stdout file (/tmp/boinchome/slots/3/PanDA_Pilot-6982978456/payload.stdout) since it has not been created yet
[2026-01-26 23:58:23] 2026-01-27 04:06:52,052 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-26 23:58:23] 2026-01-27 04:06:52,068 | INFO     | sufficient remaining disk space (92179267584 B)
[2026-01-26 23:58:23] 2026-01-27 04:06:52,069 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-01-26 23:58:23] 2026-01-27 04:06:52,069 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/3/PanDA_Pilot-6982978456/HITS.48310724._008475.pool.root.1 since it does not exist
[2026-01-26 23:58:23] 2026-01-27 04:06:52,431 | INFO     | number of running child processes to parent process 1585750: 1
[2026-01-26 23:58:23] 2026-01-27 04:06:52,432 | INFO     | maximum number of monitored processes: 6
[2026-01-26 23:58:23] 2026-01-27 04:06:52,432 | INFO     | aborting job monitoring since job object (job id=6982978456) has expired
[2026-01-26 23:58:23] 2026-01-27 04:06:52,432 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 23:58:23] 2026-01-27 04:06:52,432 | INFO     | will abort loop
[2026-01-26 23:58:23] 2026-01-27 04:06:52,508 | INFO     | [job] queue monitor thread has finished
[2026-01-26 23:58:23] 2026-01-27 04:06:52,745 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 23:58:23] 2026-01-27 04:06:52,840 | INFO     | job.realtimelogging is not enabled
[2026-01-26 23:58:23] 2026-01-27 04:06:53,439 | INFO     | [job] job monitor thread has finished
[2026-01-26 23:58:23] 2026-01-27 04:06:53,846 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 23:58:23] 2026-01-27 04:07:18,604 | INFO     | PID=1579600 has CPU usage=7.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-26 23:58:23] 2026-01-27 04:07:18,606 | INFO     | .. there are 20 such processes running
[2026-01-26 23:58:23] 2026-01-27 04:07:18,607 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 23:58:23] 2026-01-27 04:07:18,607 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 23:58:23] 2026-01-27 04:07:18,607 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 23:58:23] 2026-01-27 04:07:42,685 | INFO     | [monitor] cgroup control has ended
[2026-01-26 23:58:23] 2026-01-27 04:07:44,569 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140537909765952)>', '<ExcThread(monitor, started 140537420044032)>']
[2026-01-26 23:58:23] 2026-01-27 04:07:44,832 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 23:58:23] 2026-01-27 04:07:44,832 | INFO     | [monitor] control thread has ended
[2026-01-26 23:58:23] 2026-01-27 04:07:49,594 | INFO     | all workflow threads have been joined
[2026-01-26 23:58:23] 2026-01-27 04:07:49,594 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 23:58:23] 2026-01-27 04:07:49,595 | INFO     | traces error code: 0
[2026-01-26 23:58:23] 2026-01-27 04:07:49,595 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 23:58:23] 2026-01-27 04:07:49,701 [wrapper] ==== pilot stdout END ====
[2026-01-26 23:58:23] 2026-01-27 04:07:49,703 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 23:58:23] 2026-01-27 04:07:49,722 [wrapper] pilotpid: 1579600
[2026-01-26 23:58:23] 2026-01-27 04:07:49,819 [wrapper] Pilot exit status: 0
[2026-01-26 23:58:23] 2026-01-27 04:07:49,834 [wrapper] pandaids: 6982978456
[2026-01-26 23:58:23] 2026-01-27 04:07:49,918 [wrapper] cleanup supervisor_pilot 1823509 1579601
[2026-01-26 23:58:23] 2026-01-27 04:07:49,971 [wrapper] Test setup, not cleaning
[2026-01-26 23:58:23] 2026-01-27 04:07:49,979 [wrapper] apfmon messages muted
[2026-01-26 23:58:23] 2026-01-27 04:07:49,981 [wrapper] ==== wrapper stdout END ====
[2026-01-26 23:58:23] 2026-01-27 04:07:49,983 [wrapper] ==== wrapper stderr END ====
[2026-01-26 23:58:23]  *** Error codes and diagnostics ***
[2026-01-26 23:58:23]     "exeErrorCode": 0,
[2026-01-26 23:58:23]     "exeErrorDiag": "",
[2026-01-26 23:58:23]     "pilotErrorCode": 0,
[2026-01-26 23:58:23]     "pilotErrorDiag": "",
[2026-01-26 23:58:23]  *** Listing of results directory ***
[2026-01-26 23:58:23] total 665128
[2026-01-26 23:58:23] -rw-r--r--. 1 boincer umatlas    584422 Jan 25 06:26 pilot3.tar.gz
[2026-01-26 23:58:23] -rw-r--r--. 1 boincer umatlas      5111 Jan 25 06:28 queuedata.json
[2026-01-26 23:58:23] -rwx------. 1 boincer umatlas     36322 Jan 25 06:28 runpilot2-wrapper.sh
[2026-01-26 23:58:23] -rw-r--r--. 1 boincer umatlas       100 Jan 26 21:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 23:58:23] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 26 21:39 run_atlas
[2026-01-26 23:58:23] -rw-r--r--. 1 boincer umatlas       105 Jan 26 21:39 job.xml
[2026-01-26 23:58:23] -rw-r--r--. 2 boincer umatlas 494314309 Jan 26 21:39 EVNT.48310721._000170.pool.root.1
[2026-01-26 23:58:23] -rw-r--r--. 2 boincer umatlas     15845 Jan 26 21:39 start_atlas.sh
[2026-01-26 23:58:23] drwxrwx--x. 2 boincer umatlas      4096 Jan 26 21:39 shared
[2026-01-26 23:58:23] -rw-r--r--. 2 boincer umatlas    597769 Jan 26 21:39 input.tar.gz
[2026-01-26 23:58:23] -rw-r--r--. 1 boincer umatlas         0 Jan 26 21:39 boinc_lockfile
[2026-01-26 23:58:23] -rw-r--r--. 1 boincer umatlas      2533 Jan 26 21:39 pandaJob.out
[2026-01-26 23:58:23] -rw-------. 1 boincer umatlas        57 Jan 26 21:39 setup.sh.local
[2026-01-26 23:58:23] -rw-------. 1 boincer umatlas   1006425 Jan 26 21:39 agis_schedconf.cvmfs.json
[2026-01-26 23:58:23] -rw-------. 1 boincer umatlas   1516246 Jan 26 21:39 agis_ddmendpoints.agis.ALL.json
[2026-01-26 23:58:23] -rw-------. 1 boincer umatlas       424 Jan 26 21:39 workernode_map.json
[2026-01-26 23:58:23] drwx------. 5 boincer umatlas      4096 Jan 26 21:39 pilot3
[2026-01-26 23:58:23] -rw-------. 1 boincer umatlas 180635816 Jan 26 23:06 HITS.48310724._008475.pool.root.1
[2026-01-26 23:58:23] -rw-r--r--. 1 boincer umatlas       530 Jan 26 23:06 boinc_task_state.xml
[2026-01-26 23:58:23] -rw-------. 1 boincer umatlas      1043 Jan 26 23:06 memory_monitor_summary.json
[2026-01-26 23:58:23] -rw-------. 1 boincer umatlas    345728 Jan 26 23:06 log.48310724._008475.job.log.tgz.1
[2026-01-26 23:58:23] -rw-------. 1 boincer umatlas      6319 Jan 26 23:06 heartbeat.json
[2026-01-26 23:58:23] -rw-------. 1 boincer umatlas        95 Jan 26 23:07 pilot_heartbeat.json
[2026-01-26 23:58:23] -rw-------. 1 boincer umatlas      6054 Jan 26 23:07 pilotlog.txt
[2026-01-26 23:58:23] -rw-------. 1 boincer umatlas    748764 Jan 26 23:07 log.48310724._008475.job.log.1
[2026-01-26 23:58:23] -rw-------. 1 boincer umatlas       357 Jan 26 23:07 output.list
[2026-01-26 23:58:23] -rw-r--r--. 1 boincer umatlas       620 Jan 26 23:07 runtime_log
[2026-01-26 23:58:23] -rw-------. 1 boincer umatlas   1116160 Jan 26 23:07 result.tar.gz
[2026-01-26 23:58:23] -rw-------. 1 boincer umatlas       653 Jan 26 23:07 xkGODmCTD48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmnR7KDmiImlYm.diag
[2026-01-26 23:58:23] -rw-r--r--. 1 boincer umatlas      9341 Jan 26 23:07 runtime_log.err
[2026-01-26 23:58:23] -rw-r--r--. 1 boincer umatlas      6902 Jan 26 23:55 init_data.xml
[2026-01-26 23:58:23] -rw-r--r--. 1 boincer umatlas        27 Jan 26 23:58 wrapper_checkpoint.txt
[2026-01-26 23:58:23] -rw-r--r--. 1 boincer umatlas      8192 Jan 26 23:58 boinc_mmap_file
[2026-01-26 23:58:23] -rw-r--r--. 1 boincer umatlas     21841 Jan 26 23:58 stderr.txt
[2026-01-26 23:58:23] HITS file was successfully produced:
[2026-01-26 23:58:23] -rw-------. 1 boincer umatlas 180635816 Jan 26 23:06 shared/HITS.pool.root.1
[2026-01-26 23:58:23]  *** Contents of shared directory: ***
[2026-01-26 23:58:23] total 660836
[2026-01-26 23:58:23] -rw-r--r--. 2 boincer umatlas 494314309 Jan 26 21:39 ATLAS.root_0
[2026-01-26 23:58:23] -rw-r--r--. 2 boincer umatlas     15845 Jan 26 21:39 start_atlas.sh
[2026-01-26 23:58:23] -rw-r--r--. 2 boincer umatlas    597769 Jan 26 21:39 input.tar.gz
[2026-01-26 23:58:23] -rw-------. 1 boincer umatlas 180635816 Jan 26 23:06 HITS.pool.root.1
[2026-01-26 23:58:23] -rw-------. 1 boincer umatlas   1116160 Jan 26 23:07 result.tar.gz
23:58:25 (1570393): run_atlas exited; CPU time 32121.346363
23:58:25 (1570393): called boinc_finish(0)

</stderr_txt>
]]>

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