Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:59:38 (1476044): wrapper (7.7.26015): starting
20:59:38 (1476044): wrapper: running run_atlas (--nthreads 8)
[2026-01-26 20:59:38] Arguments: --nthreads 8
[2026-01-26 20:59:38] Threads: 8
[2026-01-26 20:59:38] Checking for CVMFS
[2026-01-26 20:59:38] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 20:59:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 20:59:39] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 20:59:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 20:59:39] 2.13.3.0 12213 118702 249444 155568 1 754 39906084 40960000 27221 16776704 0 850095255 99.692 694928643 36099 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-26 20:59:39] CVMFS is ok
[2026-01-26 20:59:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 20:59:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 20:59:39] Further information can be found at the LHC@home message board.
[2026-01-26 20:59:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 20:59:39] Checking for apptainer binary...
[2026-01-26 20:59:39] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 20:59:39] Running /usr/bin/apptainer --version
[2026-01-26 20:59:39] apptainer version 1.4.5-2.el9
[2026-01-26 20:59:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 20:59:39] c7-3-35.aglt2.org
[2026-01-26 20:59:39] apptainer works
[2026-01-26 20:59:39] Set ATHENA_PROC_NUMBER=8
[2026-01-26 20:59:39] Set ATHENA_CORE_NUMBER=8
[2026-01-26 20:59:39] Starting ATLAS job with PandaID=6982021252
[2026-01-26 20:59:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 23:56:24]  *** The last 200 lines of the pilot log: ***
[2026-01-26 23:56:24] 2026-01-27 04:55:22,473 | INFO     | mean y: 2483906.011627907
[2026-01-26 23:56:24] 2026-01-27 04:55:22,474 | INFO     | intersect: -39437867418.026985
[2026-01-26 23:56:24] 2026-01-27 04:55:22,474 | INFO     | chi2: 1.4508006251804912
[2026-01-26 23:56:24] 2026-01-27 04:55:22,474 | INFO     | sum of square deviations: 1444149868.0
[2026-01-26 23:56:24] 2026-01-27 04:55:22,475 | INFO     | sum of deviations: 34005229823.999996
[2026-01-26 23:56:24] 2026-01-27 04:55:22,475 | INFO     | mean x: 1769484289.0
[2026-01-26 23:56:24] 2026-01-27 04:55:22,475 | INFO     | mean y: 2482579.023952096
[2026-01-26 23:56:24] 2026-01-27 04:55:22,475 | INFO     | intersect: -41663359208.38965
[2026-01-26 23:56:24] 2026-01-27 04:55:22,475 | INFO     | chi2: 1.4509603696500277
[2026-01-26 23:56:24] 2026-01-27 04:55:22,475 | INFO     | current chi2=1.4509603696500277 (change=-0.011010780307363665 %)
[2026-01-26 23:56:24] 2026-01-27 04:55:22,475 | INFO     | right removable region: 166
[2026-01-26 23:56:24] 2026-01-27 04:55:22,475 | INFO     | sum of square deviations: 1444149868.0
[2026-01-26 23:56:24] 2026-01-27 04:55:22,498 | INFO     | sum of deviations: 7581397505.0
[2026-01-26 23:56:24] 2026-01-27 04:55:22,499 | INFO     | mean x: 1769484594.0
[2026-01-26 23:56:24] 2026-01-27 04:55:22,499 | INFO     | mean y: 2515030.790419162
[2026-01-26 23:56:24] 2026-01-27 04:55:22,499 | INFO     | intersect: -9286802084.659777
[2026-01-26 23:56:24] 2026-01-27 04:55:22,499 | INFO     | chi2: 0.02513698833901911
[2026-01-26 23:56:24] 2026-01-27 04:55:22,499 | INFO     | current chi2=0.02513698833901911 (change=98.26737127743573 %)
[2026-01-26 23:56:24] 2026-01-27 04:55:22,500 | INFO     | sum of square deviations: 1318277740.5
[2026-01-26 23:56:24] 2026-01-27 04:55:22,500 | INFO     | sum of deviations: 5641647159.0
[2026-01-26 23:56:24] 2026-01-27 04:55:22,500 | INFO     | mean x: 1769484746.5
[2026-01-26 23:56:24] 2026-01-27 04:55:22,500 | INFO     | mean y: 2517314.950617284
[2026-01-26 23:56:24] 2026-01-27 04:55:22,501 | INFO     | intersect: -7570096775.612161
[2026-01-26 23:56:24] 2026-01-27 04:55:22,501 | INFO     | chi2: 0.0067887563733204336
[2026-01-26 23:56:24] 2026-01-27 04:55:22,501 | INFO     | current chi2=0.0067887563733204336 (change=72.99296048611151 %)
[2026-01-26 23:56:24] 2026-01-27 04:55:22,501 | INFO     | sum of square deviations: 1199940638.0
[2026-01-26 23:56:24] 2026-01-27 04:55:22,513 | INFO     | sum of deviations: 6091978011.999999
[2026-01-26 23:56:24] 2026-01-27 04:55:22,513 | INFO     | mean x: 1769484899.0
[2026-01-26 23:56:24] 2026-01-27 04:55:22,513 | INFO     | mean y: 2516763.1656050957
[2026-01-26 23:56:24] 2026-01-27 04:55:22,513 | INFO     | intersect: -8980980216.519182
[2026-01-26 23:56:24] 2026-01-27 04:55:22,513 | INFO     | chi2: 0.002565069398605348
[2026-01-26 23:56:24] 2026-01-27 04:55:22,514 | INFO     | current chi2=0.002565069398605348 (change=62.21591617743159 %)
[2026-01-26 23:56:24] 2026-01-27 04:55:22,514 | INFO     | sum of square deviations: 1088905998.0
[2026-01-26 23:56:24] 2026-01-27 04:55:22,514 | INFO     | sum of deviations: 4842303738.499998
[2026-01-26 23:56:24] 2026-01-27 04:55:22,515 | INFO     | mean x: 1769485051.5
[2026-01-26 23:56:24] 2026-01-27 04:55:22,515 | INFO     | mean y: 2518478.0592105263
[2026-01-26 23:56:24] 2026-01-27 04:55:22,515 | INFO     | intersect: -7866282039.006462
[2026-01-26 23:56:24] 2026-01-27 04:55:22,515 | INFO     | chi2: 0.0018117809876318038
[2026-01-26 23:56:24] 2026-01-27 04:55:22,515 | INFO     | current chi2=0.0018117809876318038 (change=29.367174680853235 %)
[2026-01-26 23:56:24] 2026-01-27 04:55:22,515 | INFO     | sum of square deviations: 984941258.0
[2026-01-26 23:56:24] 2026-01-27 04:55:22,516 | INFO     | sum of deviations: 4021269328.0000014
[2026-01-26 23:56:24] 2026-01-27 04:55:22,516 | INFO     | mean x: 1769485204.0
[2026-01-26 23:56:24] 2026-01-27 04:55:22,516 | INFO     | mean y: 2519679.9727891157
[2026-01-26 23:56:24] 2026-01-27 04:55:22,516 | INFO     | intersect: -7221846767.670757
[2026-01-26 23:56:24] 2026-01-27 04:55:22,516 | INFO     | chi2: 0.001581415112795586
[2026-01-26 23:56:24] 2026-01-27 04:55:22,516 | INFO     | current chi2=0.001581415112795586 (change=12.714885320511678 %)
[2026-01-26 23:56:24] 2026-01-27 04:55:22,517 | INFO     | left removable region: 50
[2026-01-26 23:56:24] 2026-01-27 04:55:22,517 | INFO     | sum of square deviations: 483971865.0
[2026-01-26 23:56:24] 2026-01-27 04:55:22,517 | INFO     | sum of deviations: 1441932304.4999998
[2026-01-26 23:56:24] 2026-01-27 04:55:22,517 | INFO     | mean x: 1769485783.5
[2026-01-26 23:56:24] 2026-01-27 04:55:22,517 | INFO     | mean y: 2523933.2327586208
[2026-01-26 23:56:24] 2026-01-27 04:55:22,518 | INFO     | intersect: -5269432761.155132
[2026-01-26 23:56:24] 2026-01-27 04:55:22,518 | INFO     | chi2: 0.0011553951403722989
[2026-01-26 23:56:24] 2026-01-27 04:55:22,518 | INFO     | current memory leak: 2.98 B/s (using 116 data points, chi2=0.00)
[2026-01-26 23:56:24] 2026-01-27 04:55:22,518 | INFO     | could have reported an average CPU frequency of 3234 MHz (9 samples)
[2026-01-26 23:56:24] 2026-01-27 04:55:22,519 | INFO     | ..............................
[2026-01-26 23:56:24] 2026-01-27 04:55:22,519 | INFO     | . Timing measurements:
[2026-01-26 23:56:24] 2026-01-27 04:55:22,519 | INFO     | . get job = 0 s
[2026-01-26 23:56:24] 2026-01-27 04:55:22,519 | INFO     | . initial setup = 8 s
[2026-01-26 23:56:24] 2026-01-27 04:55:22,519 | INFO     | . payload setup = 7 s
[2026-01-26 23:56:24] 2026-01-27 04:55:22,519 | INFO     | . stage-in = 0 s
[2026-01-26 23:56:24] 2026-01-27 04:55:22,519 | INFO     | . payload execution = 10495 s
[2026-01-26 23:56:24] 2026-01-27 04:55:22,519 | INFO     | . stage-out = 1 s
[2026-01-26 23:56:24] 2026-01-27 04:55:22,519 | INFO     | . log creation = 0 s
[2026-01-26 23:56:24] 2026-01-27 04:55:22,519 | INFO     | ..............................
[2026-01-26 23:56:24] 2026-01-27 04:55:22,598 | INFO     | 
[2026-01-26 23:56:24] 2026-01-27 04:55:22,598 | INFO     | job summary report
[2026-01-26 23:56:24] 2026-01-27 04:55:22,598 | INFO     | --------------------------------------------------
[2026-01-26 23:56:24] 2026-01-27 04:55:22,599 | INFO     | PanDA job id: 6982021252
[2026-01-26 23:56:24] 2026-01-27 04:55:22,599 | INFO     | task id: 48310826
[2026-01-26 23:56:24] 2026-01-27 04:55:22,599 | INFO     | errors: (none)
[2026-01-26 23:56:24] 2026-01-27 04:55:22,599 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 23:56:24] 2026-01-27 04:55:22,599 | INFO     | pilot state: finished 
[2026-01-26 23:56:24] 2026-01-27 04:55:22,599 | INFO     | transexitcode: 0
[2026-01-26 23:56:24] 2026-01-27 04:55:22,599 | INFO     | exeerrorcode: 0
[2026-01-26 23:56:24] 2026-01-27 04:55:22,599 | INFO     | exeerrordiag: 
[2026-01-26 23:56:24] 2026-01-27 04:55:22,599 | INFO     | exitcode: 0
[2026-01-26 23:56:24] 2026-01-27 04:55:22,599 | INFO     | exitmsg: OK
[2026-01-26 23:56:24] 2026-01-27 04:55:22,599 | INFO     | cpuconsumptiontime: 29832 s
[2026-01-26 23:56:24] 2026-01-27 04:55:22,599 | INFO     | nevents: 400
[2026-01-26 23:56:24] 2026-01-27 04:55:22,599 | INFO     | neventsw: 0
[2026-01-26 23:56:24] 2026-01-27 04:55:22,599 | INFO     | pid: 1493834
[2026-01-26 23:56:24] 2026-01-27 04:55:22,599 | INFO     | pgrp: 1493834
[2026-01-26 23:56:24] 2026-01-27 04:55:22,600 | INFO     | corecount: 8
[2026-01-26 23:56:24] 2026-01-27 04:55:22,600 | INFO     | event service: False
[2026-01-26 23:56:24] 2026-01-27 04:55:22,600 | INFO     | sizes: {0: 2283151, 1: 2284269, 12: 2284269, 10507: 2313584, 10509: 2322638, 10511: 2322840}
[2026-01-26 23:56:24] 2026-01-27 04:55:22,600 | INFO     | --------------------------------------------------
[2026-01-26 23:56:24] 2026-01-27 04:55:22,600 | INFO     | 
[2026-01-26 23:56:24] 2026-01-27 04:55:22,600 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2026-01-26 23:56:24] 2026-01-27 04:55:22,623 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 23:56:24] 2026-01-27 04:55:22,624 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 23:56:24] 2026-01-27 04:55:22,624 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 23:56:24] 2026-01-27 04:55:22,624 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 23:56:24] 2026-01-27 04:55:22,624 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 23:56:24] 2026-01-27 04:55:22,624 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 23:56:24] 2026-01-27 04:55:22,624 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 23:56:24] 2026-01-27 04:55:22,624 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 23:56:24] 2026-01-27 04:55:22,624 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 23:56:24] 2026-01-27 04:55:22,624 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 23:56:24] 2026-01-27 04:55:22,625 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 23:56:24] 2026-01-27 04:55:22,625 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 23:56:24] 2026-01-27 04:55:22,625 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 23:56:24] 2026-01-27 04:55:22,625 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 23:56:24] 2026-01-27 04:55:22,625 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 23:56:24] 2026-01-27 04:55:22,625 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 23:56:24] 2026-01-27 04:55:22,625 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 23:56:24] 2026-01-27 04:55:22,625 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 23:56:24] 2026-01-27 04:55:22,625 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 23:56:24] 2026-01-27 04:55:22,625 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 23:56:24] 2026-01-27 04:55:22,625 | INFO     | job 6982021252 has completed (purged errors)
[2026-01-26 23:56:24] 2026-01-27 04:55:22,626 | INFO     | overall cleanup function is called
[2026-01-26 23:56:24] 2026-01-27 04:55:23,639 | INFO     | --- collectZombieJob: --- 10, [1493834]
[2026-01-26 23:56:24] 2026-01-27 04:55:23,639 | INFO     | zombie collector waiting for pid 1493834
[2026-01-26 23:56:24] 2026-01-27 04:55:23,639 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 23:56:24] 2026-01-27 04:55:23,639 | INFO     | collected zombie processes
[2026-01-26 23:56:24] 2026-01-27 04:55:23,639 | INFO     | will attempt to kill all subprocesses of pid=1493834
[2026-01-26 23:56:24] 2026-01-27 04:55:24,293 | INFO     | process IDs to be killed: [1493834] (in reverse order)
[2026-01-26 23:56:24] 2026-01-27 04:55:24,510 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 23:56:24] 2026-01-27 04:55:24,510 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 23:56:24] 2026-01-27 04:55:24,534 | INFO     | did not find any defunct processes belonging to 1493834
[2026-01-26 23:56:24] 2026-01-27 04:55:24,559 | INFO     | did not find any defunct processes belonging to 1493834
[2026-01-26 23:56:24] 2026-01-27 04:55:24,559 | INFO     | ready for new job
[2026-01-26 23:56:24] 2026-01-27 04:55:24,560 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 23:56:24] 2026-01-27 04:55:24,561 | INFO     | **************************************
[2026-01-26 23:56:24] 2026-01-27 04:55:24,561 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 23:56:24] 2026-01-27 04:55:24,561 | INFO     | **************************************
[2026-01-26 23:56:24] 2026-01-27 04:55:24,562 | INFO     | 
[2026-01-26 23:56:24] 2026-01-27 04:55:24,566 | INFO     | architecture information:
[2026-01-26 23:56:24] 2026-01-27 04:55:24,566 | INFO     | executing command: cat /etc/os-release
[2026-01-26 23:56:24] 2026-01-27 04:55:24,602 | INFO     | cat /etc/os-release:
[2026-01-26 23:56:24] NAME="CentOS Linux"
[2026-01-26 23:56:24] VERSION="7 (Core)"
[2026-01-26 23:56:24] ID="centos"
[2026-01-26 23:56:24] ID_LIKE="rhel fedora"
[2026-01-26 23:56:24] VERSION_ID="7"
[2026-01-26 23:56:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 23:56:24] ANSI_COLOR="0;31"
[2026-01-26 23:56:24] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 23:56:24] HOME_URL="https://www.centos.org/"
[2026-01-26 23:56:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 23:56:24] 
[2026-01-26 23:56:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 23:56:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 23:56:24] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 23:56:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 23:56:24] 
[2026-01-26 23:56:24] 2026-01-27 04:55:24,602 | INFO     | **************************************
[2026-01-26 23:56:24] 2026-01-27 04:55:25,108 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2026-01-26 23:56:24] 2026-01-27 04:55:25,128 | INFO     | sufficient remaining disk space (125097213952 B)
[2026-01-26 23:56:24] 2026-01-27 04:55:25,128 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 23:56:24] 2026-01-27 04:55:25,129 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 23:56:24] 2026-01-27 04:55:25,129 | INFO     | update_server=False
[2026-01-26 23:56:24] 2026-01-27 04:55:25,129 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 23:56:24] 2026-01-27 04:55:25,130 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 23:56:24] 2026-01-27 04:55:25,164 | INFO     | all payload control threads have been joined
[2026-01-26 23:56:24] 2026-01-27 04:55:25,473 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 23:56:24] 2026-01-27 04:55:25,473 | INFO     | aborting loop
[2026-01-26 23:56:24] 2026-01-27 04:55:25,610 | INFO     | all job control threads have been joined
[2026-01-26 23:56:24] 2026-01-27 04:55:25,773 | INFO     | all data control threads have been joined
[2026-01-26 23:56:24] 2026-01-27 04:55:26,134 | INFO     | [job] retrieve thread has finished
[2026-01-26 23:56:24] 2026-01-27 04:55:26,168 | INFO     | [payload] control thread has finished
[2026-01-26 23:56:24] 2026-01-27 04:55:26,235 | INFO     | [data] copytool_in thread has finished
[2026-01-26 23:56:24] 2026-01-27 04:55:26,449 | INFO     | [payload] validate_post thread has finished
[2026-01-26 23:56:24] 2026-01-27 04:55:26,478 | INFO     | [job] job monitor thread has finished
[2026-01-26 23:56:24] 2026-01-27 04:55:26,615 | INFO     | [job] control thread has finished
[2026-01-26 23:56:24] 2026-01-27 04:55:26,651 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 23:56:24] 2026-01-27 04:55:26,716 | INFO     | [job] validate thread has finished
[2026-01-26 23:56:24] 2026-01-27 04:55:26,781 | INFO     | [data] control thread has finished
[2026-01-26 23:56:24] 2026-01-27 04:55:27,136 | INFO     | [data] copytool_out thread has finished
[2026-01-26 23:56:24] 2026-01-27 04:55:27,320 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 23:56:24] 2026-01-27 04:55:27,448 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 23:56:24] 2026-01-27 04:55:27,525 | INFO     | [payload] failed_post thread has finished
[2026-01-26 23:56:24] 2026-01-27 04:55:27,563 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 23:56:24] 2026-01-27 04:55:27,599 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 23:56:24] 2026-01-27 04:55:27,611 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 23:56:24] 2026-01-27 04:55:28,617 | INFO     | [job] queue monitor thread has finished
[2026-01-26 23:56:24] 2026-01-27 04:55:31,571 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 23:56:24] 2026-01-27 04:55:55,243 | INFO     | PID=1485041 has CPU usage=7.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-26 23:56:24] 2026-01-27 04:55:55,247 | INFO     | .. there are 28 such processes running
[2026-01-26 23:56:24] 2026-01-27 04:55:55,248 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 23:56:24] 2026-01-27 04:55:55,248 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 23:56:24] 2026-01-27 04:55:55,248 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 23:56:24] 2026-01-27 04:56:18,074 | INFO     | [monitor] cgroup control has ended
[2026-01-26 23:56:24] 2026-01-27 04:56:18,662 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140590279018304)>', '<ExcThread(monitor, started 140589043545856)>']
[2026-01-26 23:56:24] 2026-01-27 04:56:19,427 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 23:56:24] 2026-01-27 04:56:19,427 | INFO     | [monitor] control thread has ended
[2026-01-26 23:56:24] 2026-01-27 04:56:23,702 | INFO     | all workflow threads have been joined
[2026-01-26 23:56:24] 2026-01-27 04:56:23,702 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 23:56:24] 2026-01-27 04:56:23,702 | INFO     | traces error code: 0
[2026-01-26 23:56:24] 2026-01-27 04:56:23,703 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 23:56:24] 2026-01-27 04:56:24,563 [wrapper] ==== pilot stdout END ====
[2026-01-26 23:56:24] 2026-01-27 04:56:24,565 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 23:56:24] 2026-01-27 04:56:24,568 [wrapper] pilotpid: 1485041
[2026-01-26 23:56:24] 2026-01-27 04:56:24,570 [wrapper] Pilot exit status: 0
[2026-01-26 23:56:24] 2026-01-27 04:56:24,633 [wrapper] pandaids: 6982021252
[2026-01-26 23:56:24] 2026-01-27 04:56:24,760 [wrapper] cleanup supervisor_pilot 2170330 1485042
[2026-01-26 23:56:24] 2026-01-27 04:56:24,763 [wrapper] Test setup, not cleaning
[2026-01-26 23:56:24] 2026-01-27 04:56:24,765 [wrapper] apfmon messages muted
[2026-01-26 23:56:24] 2026-01-27 04:56:24,767 [wrapper] ==== wrapper stdout END ====
[2026-01-26 23:56:24] 2026-01-27 04:56:24,769 [wrapper] ==== wrapper stderr END ====
[2026-01-26 23:56:24]  *** Error codes and diagnostics ***
[2026-01-26 23:56:24]     "exeErrorCode": 0,
[2026-01-26 23:56:24]     "exeErrorDiag": "",
[2026-01-26 23:56:24]     "pilotErrorCode": 0,
[2026-01-26 23:56:24]     "pilotErrorDiag": "",
[2026-01-26 23:56:24]  *** Listing of results directory ***
[2026-01-26 23:56:24] total 666008
[2026-01-26 23:56:24] -rwx------. 1 boincer umatlas     36322 Jan 24 16:55 runpilot2-wrapper.sh
[2026-01-26 23:56:24] -rw-r--r--. 1 boincer umatlas      5111 Jan 24 16:59 queuedata.json
[2026-01-26 23:56:24] -rw-r--r--. 1 boincer umatlas    584422 Jan 24 16:59 pilot3.tar.gz
[2026-01-26 23:56:24] -rw-r--r--. 1 boincer umatlas       100 Jan 26 20:59 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 23:56:24] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 26 20:59 run_atlas
[2026-01-26 23:56:24] -rw-r--r--. 1 boincer umatlas       105 Jan 26 20:59 job.xml
[2026-01-26 23:56:24] -rw-r--r--. 2 boincer umatlas 491568421 Jan 26 20:59 EVNT.48310824._000052.pool.root.1
[2026-01-26 23:56:24] -rw-r--r--. 2 boincer umatlas     15845 Jan 26 20:59 start_atlas.sh
[2026-01-26 23:56:24] drwxrwx--x. 2 boincer umatlas      4096 Jan 26 20:59 shared
[2026-01-26 23:56:24] -rw-r--r--. 2 boincer umatlas    597757 Jan 26 20:59 input.tar.gz
[2026-01-26 23:56:24] -rw-r--r--. 1 boincer umatlas         0 Jan 26 20:59 boinc_lockfile
[2026-01-26 23:56:24] -rw-r--r--. 1 boincer umatlas      2523 Jan 26 20:59 pandaJob.out
[2026-01-26 23:56:24] -rw-------. 1 boincer umatlas        57 Jan 26 20:59 setup.sh.local
[2026-01-26 23:56:24] -rw-------. 1 boincer umatlas   1006441 Jan 26 20:59 agis_schedconf.cvmfs.json
[2026-01-26 23:56:24] -rw-------. 1 boincer umatlas   1516246 Jan 26 20:59 agis_ddmendpoints.agis.ALL.json
[2026-01-26 23:56:24] -rw-------. 1 boincer umatlas       429 Jan 26 20:59 workernode_map.json
[2026-01-26 23:56:24] drwx------. 5 boincer umatlas      4096 Jan 26 21:00 pilot3
[2026-01-26 23:56:24] -rw-------. 1 boincer umatlas 182762548 Jan 26 23:54 HITS.48310826._006621.pool.root.1
[2026-01-26 23:56:24] -rw-r--r--. 1 boincer umatlas       530 Jan 26 23:54 boinc_task_state.xml
[2026-01-26 23:56:24] -rw-------. 1 boincer umatlas        95 Jan 26 23:54 pilot_heartbeat.json
[2026-01-26 23:56:24] -rw-------. 1 boincer umatlas      1043 Jan 26 23:55 memory_monitor_summary.json
[2026-01-26 23:56:24] -rw-------. 1 boincer umatlas    403869 Jan 26 23:55 log.48310826._006621.job.log.tgz.1
[2026-01-26 23:56:24] -rw-------. 1 boincer umatlas      6341 Jan 26 23:55 heartbeat.json
[2026-01-26 23:56:24] -rw-r--r--. 1 boincer umatlas      6947 Jan 26 23:56 init_data.xml
[2026-01-26 23:56:24] -rw-------. 1 boincer umatlas      4821 Jan 26 23:56 pilotlog.txt
[2026-01-26 23:56:24] -rw-r--r--. 1 boincer umatlas      8192 Jan 26 23:56 boinc_mmap_file
[2026-01-26 23:56:24] -rw-r--r--. 1 boincer umatlas        27 Jan 26 23:56 wrapper_checkpoint.txt
[2026-01-26 23:56:24] -rw-------. 1 boincer umatlas   1454242 Jan 26 23:56 log.48310826._006621.job.log.1
[2026-01-26 23:56:24] -rw-------. 1 boincer umatlas       357 Jan 26 23:56 output.list
[2026-01-26 23:56:24] -rw-r--r--. 1 boincer umatlas       620 Jan 26 23:56 runtime_log
[2026-01-26 23:56:24] -rw-------. 1 boincer umatlas   1873920 Jan 26 23:56 result.tar.gz
[2026-01-26 23:56:24] -rw-r--r--. 1 boincer umatlas      9337 Jan 26 23:56 runtime_log.err
[2026-01-26 23:56:24] -rw-------. 1 boincer umatlas       659 Jan 26 23:56 MU7NDmmm038n9Rq4apOajLDm4fhM0noT9bVo0NGKDm7VzKDmlovsGm.diag
[2026-01-26 23:56:24] -rw-r--r--. 1 boincer umatlas     20906 Jan 26 23:56 stderr.txt
[2026-01-26 23:56:24] HITS file was successfully produced:
[2026-01-26 23:56:24] -rw-------. 1 boincer umatlas 182762548 Jan 26 23:54 shared/HITS.pool.root.1
[2026-01-26 23:56:24]  *** Contents of shared directory: ***
[2026-01-26 23:56:24] total 660968
[2026-01-26 23:56:24] -rw-r--r--. 2 boincer umatlas 491568421 Jan 26 20:59 ATLAS.root_0
[2026-01-26 23:56:24] -rw-r--r--. 2 boincer umatlas     15845 Jan 26 20:59 start_atlas.sh
[2026-01-26 23:56:24] -rw-r--r--. 2 boincer umatlas    597757 Jan 26 20:59 input.tar.gz
[2026-01-26 23:56:24] -rw-------. 1 boincer umatlas 182762548 Jan 26 23:54 HITS.pool.root.1
[2026-01-26 23:56:24] -rw-------. 1 boincer umatlas   1873920 Jan 26 23:56 result.tar.gz
23:56:26 (1476044): run_atlas exited; CPU time 30283.326626
23:56:26 (1476044): called boinc_finish(0)

</stderr_txt>
]]>

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