Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
15:08:24 (1851457): wrapper (7.7.26015): starting
15:08:24 (1851457): wrapper: running run_atlas (--nthreads 4)
[2026-01-27 15:08:24] Arguments: --nthreads 4
[2026-01-27 15:08:24] Threads: 4
[2026-01-27 15:08:24] Checking for CVMFS
[2026-01-27 15:08:24] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-27 15:08:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-27 15:08:26] Running cvmfs_config stat atlas.cern.ch
[2026-01-27 15:08:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-27 15:08:26] 2.13.3.0 1352486 5863 58316 155587 0 50 3522394 4096000 0 130560 0 1554422 99.974 214629 2470 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-27 15:08:26] CVMFS is ok
[2026-01-27 15:08:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-27 15:08:26] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-27 15:08:26] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-27 15:08:26] Further information can be found at the LHC@home message board.
[2026-01-27 15:08:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-27 15:08:26] Checking for apptainer binary...
[2026-01-27 15:08:26] apptainer is not installed, using version from CVMFS
[2026-01-27 15:08:26] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-27 15:08:26] localhost
[2026-01-27 15:08:26] apptainer works
[2026-01-27 15:08:26] Set ATHENA_PROC_NUMBER=4
[2026-01-27 15:08:26] Set ATHENA_CORE_NUMBER=4
[2026-01-27 15:08:26] Starting ATLAS job with PandaID=6983773986
[2026-01-27 15:08:26] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 18:05:06]  *** The last 200 lines of the pilot log: ***
[2026-01-27 18:05:06] 2026-01-27 18:04:17,191 | INFO     | extracted standard memory fields from prmon json
[2026-01-27 18:05:06] 2026-01-27 18:04:17,191 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-27 18:05:06] 2026-01-27 18:04:17,191 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-27 18:05:06] 2026-01-27 18:04:17,191 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-27 18:05:06] 2026-01-27 18:04:17,193 | INFO     | fitting pss+swap vs Time
[2026-01-27 18:05:06] 2026-01-27 18:04:17,193 | INFO     | sum of square deviations: 1605470102.0
[2026-01-27 18:05:06] 2026-01-27 18:04:17,194 | INFO     | sum of deviations: -1949698348.0
[2026-01-27 18:05:06] 2026-01-27 18:04:17,194 | INFO     | mean x: 1769531788.0
[2026-01-27 18:05:06] 2026-01-27 18:04:17,194 | INFO     | mean y: 2334883.1156069366
[2026-01-27 18:05:06] 2026-01-27 18:04:17,194 | INFO     | intersect: 2151271322.043503
[2026-01-27 18:05:06] 2026-01-27 18:04:17,194 | INFO     | chi2: 1.8494893770648089
[2026-01-27 18:05:06] 2026-01-27 18:04:17,194 | INFO     | sum of square deviations: 1470248962.0
[2026-01-27 18:05:06] 2026-01-27 18:04:17,195 | INFO     | sum of deviations: 8022514460.499996
[2026-01-27 18:05:06] 2026-01-27 18:04:17,195 | INFO     | mean x: 1769531635.5
[2026-01-27 18:05:06] 2026-01-27 18:04:17,195 | INFO     | mean y: 2345865.386904762
[2026-01-27 18:05:06] 2026-01-27 18:04:17,195 | INFO     | intersect: -9653225062.410122
[2026-01-27 18:05:06] 2026-01-27 18:04:17,196 | INFO     | chi2: 1.1787794622910694
[2026-01-27 18:05:06] 2026-01-27 18:04:17,196 | INFO     | current chi2=1.1787794622910694 (change=36.26459946680931 %)
[2026-01-27 18:05:06] 2026-01-27 18:04:17,196 | INFO     | sum of square deviations: 1342841922.0
[2026-01-27 18:05:06] 2026-01-27 18:04:17,196 | INFO     | sum of deviations: 7806743705.000005
[2026-01-27 18:05:06] 2026-01-27 18:04:17,196 | INFO     | mean x: 1769531483.0
[2026-01-27 18:05:06] 2026-01-27 18:04:17,197 | INFO     | mean y: 2345607.0490797544
[2026-01-27 18:05:06] 2026-01-27 18:04:17,197 | INFO     | intersect: -10284999864.810246
[2026-01-27 18:05:06] 2026-01-27 18:04:17,197 | INFO     | chi2: 1.1795925852735374
[2026-01-27 18:05:06] 2026-01-27 18:04:17,197 | INFO     | current chi2=1.1795925852735374 (change=-0.06898007714586055 %)
[2026-01-27 18:05:06] 2026-01-27 18:04:17,197 | INFO     | right removable region: 162
[2026-01-27 18:05:06] 2026-01-27 18:04:17,197 | INFO     | sum of square deviations: 1470248962.0
[2026-01-27 18:05:06] 2026-01-27 18:04:17,198 | INFO     | sum of deviations: -16636587004.5
[2026-01-27 18:05:06] 2026-01-27 18:04:17,198 | INFO     | mean x: 1769531940.5
[2026-01-27 18:05:06] 2026-01-27 18:04:17,198 | INFO     | mean y: 2351046.1964285714
[2026-01-27 18:05:06] 2026-01-27 18:04:17,198 | INFO     | intersect: 20025471515.075203
[2026-01-27 18:05:06] 2026-01-27 18:04:17,198 | INFO     | chi2: 0.7363033561255863
[2026-01-27 18:05:06] 2026-01-27 18:04:17,198 | INFO     | current chi2=0.7363033561255863 (change=60.188830211389465 %)
[2026-01-27 18:05:06] 2026-01-27 18:04:17,199 | INFO     | sum of square deviations: 1342841922.0
[2026-01-27 18:05:06] 2026-01-27 18:04:17,199 | INFO     | sum of deviations: -11807068561.0
[2026-01-27 18:05:06] 2026-01-27 18:04:17,199 | INFO     | mean x: 1769532093.0
[2026-01-27 18:05:06] 2026-01-27 18:04:17,199 | INFO     | mean y: 2345261.4417177914
[2026-01-27 18:05:06] 2026-01-27 18:04:17,200 | INFO     | intersect: 15561128764.28564
[2026-01-27 18:05:06] 2026-01-27 18:04:17,200 | INFO     | chi2: 0.7147158588492025
[2026-01-27 18:05:06] 2026-01-27 18:04:17,200 | INFO     | current chi2=0.7147158588492025 (change=2.9318754419342516 %)
[2026-01-27 18:05:06] 2026-01-27 18:04:17,200 | INFO     | left removable region: 20
[2026-01-27 18:05:06] 2026-01-27 18:04:17,200 | INFO     | sum of square deviations: 887813855.5
[2026-01-27 18:05:06] 2026-01-27 18:04:17,201 | INFO     | sum of deviations: 22993797.500000097
[2026-01-27 18:05:06] 2026-01-27 18:04:17,201 | INFO     | mean x: 1769532062.5
[2026-01-27 18:05:06] 2026-01-27 18:04:17,201 | INFO     | mean y: 2354448.091549296
[2026-01-27 18:05:06] 2026-01-27 18:04:17,201 | INFO     | intersect: -43475273.60384783
[2026-01-27 18:05:06] 2026-01-27 18:04:17,201 | INFO     | chi2: 0.0026037576913841304
[2026-01-27 18:05:06] 2026-01-27 18:04:17,201 | INFO     | current memory leak: 0.03 B/s (using 142 data points, chi2=0.00)
[2026-01-27 18:05:06] 2026-01-27 18:04:17,201 | INFO     | could have reported an average CPU frequency of 1999 MHz (9 samples)
[2026-01-27 18:05:06] 2026-01-27 18:04:17,201 | INFO     | ..............................
[2026-01-27 18:05:06] 2026-01-27 18:04:17,202 | INFO     | . Timing measurements:
[2026-01-27 18:05:06] 2026-01-27 18:04:17,202 | INFO     | . get job = 0 s
[2026-01-27 18:05:06] 2026-01-27 18:04:17,202 | INFO     | . initial setup = 8 s
[2026-01-27 18:05:06] 2026-01-27 18:04:17,202 | INFO     | . payload setup = 3 s
[2026-01-27 18:05:06] 2026-01-27 18:04:17,202 | INFO     | . stage-in = 0 s
[2026-01-27 18:05:06] 2026-01-27 18:04:17,202 | INFO     | . payload execution = 10514 s
[2026-01-27 18:05:06] 2026-01-27 18:04:17,202 | INFO     | . stage-out = 0 s
[2026-01-27 18:05:06] 2026-01-27 18:04:17,202 | INFO     | . log creation = 0 s
[2026-01-27 18:05:06] 2026-01-27 18:04:17,202 | INFO     | ..............................
[2026-01-27 18:05:06] 2026-01-27 18:04:17,256 | INFO     | 
[2026-01-27 18:05:06] 2026-01-27 18:04:17,256 | INFO     | job summary report
[2026-01-27 18:05:06] 2026-01-27 18:04:17,256 | INFO     | --------------------------------------------------
[2026-01-27 18:05:06] 2026-01-27 18:04:17,256 | INFO     | PanDA job id: 6983773986
[2026-01-27 18:05:06] 2026-01-27 18:04:17,256 | INFO     | task id: 48318042
[2026-01-27 18:05:06] 2026-01-27 18:04:17,256 | INFO     | errors: (none)
[2026-01-27 18:05:06] 2026-01-27 18:04:17,256 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-27 18:05:06] 2026-01-27 18:04:17,256 | INFO     | pilot state: finished 
[2026-01-27 18:05:06] 2026-01-27 18:04:17,256 | INFO     | transexitcode: 0
[2026-01-27 18:05:06] 2026-01-27 18:04:17,256 | INFO     | exeerrorcode: 0
[2026-01-27 18:05:06] 2026-01-27 18:04:17,256 | INFO     | exeerrordiag: 
[2026-01-27 18:05:06] 2026-01-27 18:04:17,256 | INFO     | exitcode: 0
[2026-01-27 18:05:06] 2026-01-27 18:04:17,256 | INFO     | exitmsg: OK
[2026-01-27 18:05:06] 2026-01-27 18:04:17,256 | INFO     | cpuconsumptiontime: 41041 s
[2026-01-27 18:05:06] 2026-01-27 18:04:17,256 | INFO     | nevents: 400
[2026-01-27 18:05:06] 2026-01-27 18:04:17,256 | INFO     | neventsw: 0
[2026-01-27 18:05:06] 2026-01-27 18:04:17,257 | INFO     | pid: 1859837
[2026-01-27 18:05:06] 2026-01-27 18:04:17,257 | INFO     | pgrp: 1859837
[2026-01-27 18:05:06] 2026-01-27 18:04:17,257 | INFO     | corecount: 4
[2026-01-27 18:05:06] 2026-01-27 18:04:17,257 | INFO     | event service: False
[2026-01-27 18:05:06] 2026-01-27 18:04:17,257 | INFO     | sizes: {0: 2283819, 1: 2284280, 11: 2284280, 10522: 2313295, 10523: 2322551}
[2026-01-27 18:05:06] 2026-01-27 18:04:17,257 | INFO     | --------------------------------------------------
[2026-01-27 18:05:06] 2026-01-27 18:04:17,257 | INFO     | 
[2026-01-27 18:05:06] 2026-01-27 18:04:17,257 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2026-01-27 18:05:06] 2026-01-27 18:04:17,270 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-27 18:05:06] 2026-01-27 18:04:17,270 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-27 18:05:06] 2026-01-27 18:04:17,270 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-27 18:05:06] 2026-01-27 18:04:17,270 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-27 18:05:06] 2026-01-27 18:04:17,270 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-27 18:05:06] 2026-01-27 18:04:17,270 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-27 18:05:06] 2026-01-27 18:04:17,271 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-27 18:05:06] 2026-01-27 18:04:17,271 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-27 18:05:06] 2026-01-27 18:04:17,271 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-27 18:05:06] 2026-01-27 18:04:17,271 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-27 18:05:06] 2026-01-27 18:04:17,271 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-27 18:05:06] 2026-01-27 18:04:17,271 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-27 18:05:06] 2026-01-27 18:04:17,271 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-27 18:05:06] 2026-01-27 18:04:17,271 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-27 18:05:06] 2026-01-27 18:04:17,271 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-27 18:05:06] 2026-01-27 18:04:17,271 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-27 18:05:06] 2026-01-27 18:04:17,271 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-27 18:05:06] 2026-01-27 18:04:17,271 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-27 18:05:06] 2026-01-27 18:04:17,271 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-27 18:05:06] 2026-01-27 18:04:17,271 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-27 18:05:06] 2026-01-27 18:04:17,271 | INFO     | job 6983773986 has completed (purged errors)
[2026-01-27 18:05:06] 2026-01-27 18:04:17,271 | INFO     | overall cleanup function is called
[2026-01-27 18:05:06] 2026-01-27 18:04:18,280 | INFO     | --- collectZombieJob: --- 10, [1859837]
[2026-01-27 18:05:06] 2026-01-27 18:04:18,280 | INFO     | zombie collector waiting for pid 1859837
[2026-01-27 18:05:06] 2026-01-27 18:04:18,280 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 18:05:06] 2026-01-27 18:04:18,280 | INFO     | collected zombie processes
[2026-01-27 18:05:06] 2026-01-27 18:04:18,280 | INFO     | will attempt to kill all subprocesses of pid=1859837
[2026-01-27 18:05:06] 2026-01-27 18:04:18,311 | INFO     | process IDs to be killed: [1859837] (in reverse order)
[2026-01-27 18:05:06] 2026-01-27 18:04:18,339 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 18:05:06] 2026-01-27 18:04:18,339 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 18:05:06] 2026-01-27 18:04:18,340 | INFO     | did not find any defunct processes belonging to 1859837
[2026-01-27 18:05:06] 2026-01-27 18:04:18,341 | INFO     | did not find any defunct processes belonging to 1859837
[2026-01-27 18:05:06] 2026-01-27 18:04:18,342 | INFO     | ready for new job
[2026-01-27 18:05:06] 2026-01-27 18:04:18,342 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 18:05:06] 2026-01-27 18:04:18,344 | INFO     | **************************************
[2026-01-27 18:05:06] 2026-01-27 18:04:18,344 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 18:05:06] 2026-01-27 18:04:18,344 | INFO     | **************************************
[2026-01-27 18:05:06] 2026-01-27 18:04:18,344 | INFO     | 
[2026-01-27 18:05:06] 2026-01-27 18:04:18,344 | INFO     | pilot is running in a VM
[2026-01-27 18:05:06] 2026-01-27 18:04:18,344 | INFO     | architecture information:
[2026-01-27 18:05:06] 2026-01-27 18:04:18,345 | INFO     | executing command: cat /etc/os-release
[2026-01-27 18:05:06] 2026-01-27 18:04:18,355 | INFO     | cat /etc/os-release:
[2026-01-27 18:05:06] NAME="CentOS Linux"
[2026-01-27 18:05:06] VERSION="7 (Core)"
[2026-01-27 18:05:06] ID="centos"
[2026-01-27 18:05:06] ID_LIKE="rhel fedora"
[2026-01-27 18:05:06] VERSION_ID="7"
[2026-01-27 18:05:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 18:05:06] ANSI_COLOR="0;31"
[2026-01-27 18:05:06] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 18:05:06] HOME_URL="https://www.centos.org/"
[2026-01-27 18:05:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 18:05:06] 
[2026-01-27 18:05:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 18:05:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 18:05:06] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 18:05:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 18:05:06] 
[2026-01-27 18:05:06] 2026-01-27 18:04:18,355 | INFO     | **************************************
[2026-01-27 18:05:06] 2026-01-27 18:04:18,858 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2026-01-27 18:05:06] 2026-01-27 18:04:18,871 | INFO     | sufficient remaining disk space (148956512256 B)
[2026-01-27 18:05:06] 2026-01-27 18:04:18,871 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 18:05:06] 2026-01-27 18:04:18,871 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 18:05:06] 2026-01-27 18:04:18,871 | INFO     | update_server=False
[2026-01-27 18:05:06] 2026-01-27 18:04:18,871 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 18:05:06] 2026-01-27 18:04:18,871 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 18:05:06] 2026-01-27 18:04:18,871 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 18:05:06] 2026-01-27 18:04:19,042 | INFO     | job.realtimelogging is not enabled
[2026-01-27 18:05:06] 2026-01-27 18:04:19,514 | INFO     | all data control threads have been joined
[2026-01-27 18:05:06] 2026-01-27 18:04:19,876 | INFO     | [job] retrieve thread has finished
[2026-01-27 18:05:06] 2026-01-27 18:04:19,877 | INFO     | [job] queue monitor thread has finished
[2026-01-27 18:05:06] 2026-01-27 18:04:20,023 | INFO     | [job] validate thread has finished
[2026-01-27 18:05:06] 2026-01-27 18:04:20,023 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 18:05:06] 2026-01-27 18:04:20,048 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 18:05:06] 2026-01-27 18:04:20,057 | INFO     | all payload control threads have been joined
[2026-01-27 18:05:06] 2026-01-27 18:04:20,139 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 18:05:06] 2026-01-27 18:04:20,172 | INFO     | [payload] failed_post thread has finished
[2026-01-27 18:05:06] 2026-01-27 18:04:20,192 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 18:05:06] 2026-01-27 18:04:20,219 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 18:05:06] 2026-01-27 18:04:20,247 | INFO     | all job control threads have been joined
[2026-01-27 18:05:06] 2026-01-27 18:04:20,519 | INFO     | [data] control thread has finished
[2026-01-27 18:05:06] 2026-01-27 18:04:20,733 | INFO     | [payload] validate_post thread has finished
[2026-01-27 18:05:06] 2026-01-27 18:04:20,954 | WARNING  | process 1859837 can no longer be monitored (due to stat problems) - aborting
[2026-01-27 18:05:06] 2026-01-27 18:04:20,977 | INFO     | using path: /var/lib/boinc/slots/3/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 18:05:06] 2026-01-27 18:04:21,008 | INFO     | number of running child processes to parent process 1859837: 1
[2026-01-27 18:05:06] 2026-01-27 18:04:21,008 | INFO     | maximum number of monitored processes: 6
[2026-01-27 18:05:06] 2026-01-27 18:04:21,008 | INFO     | aborting job monitoring since job object (job id=6983773986) has expired
[2026-01-27 18:05:06] 2026-01-27 18:04:21,008 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 18:05:06] 2026-01-27 18:04:21,008 | INFO     | will abort loop
[2026-01-27 18:05:06] 2026-01-27 18:04:21,062 | INFO     | [payload] control thread has finished
[2026-01-27 18:05:06] 2026-01-27 18:04:21,113 | INFO     | [data] copytool_in thread has finished
[2026-01-27 18:05:06] 2026-01-27 18:04:21,253 | INFO     | [job] control thread has finished
[2026-01-27 18:05:06] 2026-01-27 18:04:22,013 | INFO     | [job] job monitor thread has finished
[2026-01-27 18:05:06] 2026-01-27 18:04:22,144 | INFO     | [data] copytool_out thread has finished
[2026-01-27 18:05:06] 2026-01-27 18:04:22,877 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 18:05:06] 2026-01-27 18:04:49,147 | INFO     | PID=1855462 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-27 18:05:06] 2026-01-27 18:04:49,148 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 18:05:06] 2026-01-27 18:04:49,148 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 18:05:06] 2026-01-27 18:04:49,148 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 18:05:06] 2026-01-27 18:05:01,013 | INFO     | [monitor] cgroup control has ended
[2026-01-27 18:05:06] 2026-01-27 18:05:01,560 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140560230373184)>', '<ExcThread(monitor, started 140559431751424)>']
[2026-01-27 18:05:06] 2026-01-27 18:05:02,215 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 18:05:06] 2026-01-27 18:05:02,216 | INFO     | [monitor] control thread has ended
[2026-01-27 18:05:06] 2026-01-27 18:05:06,586 | INFO     | all workflow threads have been joined
[2026-01-27 18:05:06] 2026-01-27 18:05:06,586 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 18:05:06] 2026-01-27 18:05:06,587 | INFO     | traces error code: 0
[2026-01-27 18:05:06] 2026-01-27 18:05:06,587 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 18:05:06] 2026-01-27 18:05:06,662 [wrapper] ==== pilot stdout END ====
[2026-01-27 18:05:06] 2026-01-27 18:05:06,664 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 18:05:06] 2026-01-27 18:05:06,666 [wrapper] pilotpid: 1855462
[2026-01-27 18:05:06] 2026-01-27 18:05:06,668 [wrapper] Pilot exit status: 0
[2026-01-27 18:05:06] 2026-01-27 18:05:06,677 [wrapper] pandaids: 6983773986
[2026-01-27 18:05:06] 2026-01-27 18:05:06,694 [wrapper] cleanup supervisor_pilot 1864760 1855463
[2026-01-27 18:05:06] 2026-01-27 18:05:06,696 [wrapper] Test setup, not cleaning
[2026-01-27 18:05:06] 2026-01-27 18:05:06,698 [wrapper] apfmon messages muted
[2026-01-27 18:05:06] 2026-01-27 18:05:06,700 [wrapper] ==== wrapper stdout END ====
[2026-01-27 18:05:06] 2026-01-27 18:05:06,702 [wrapper] ==== wrapper stderr END ====
[2026-01-27 18:05:06]  *** Error codes and diagnostics ***
[2026-01-27 18:05:06]     "exeErrorCode": 0,
[2026-01-27 18:05:06]     "exeErrorDiag": "",
[2026-01-27 18:05:06]     "pilotErrorCode": 0,
[2026-01-27 18:05:06]     "pilotErrorDiag": "",
[2026-01-27 18:05:06]  *** Listing of results directory ***
[2026-01-27 18:05:06] total 677980
[2026-01-27 18:05:06] -rw-r--r-- 1 boinc boinc    584422 Jan 26 05:14 pilot3.tar.gz
[2026-01-27 18:05:06] -rwx------ 1 boinc boinc     36322 Jan 26 05:17 runpilot2-wrapper.sh
[2026-01-27 18:05:06] -rw-r--r-- 1 boinc boinc      5111 Jan 26 05:22 queuedata.json
[2026-01-27 18:05:06] -rw-r--r-- 1 boinc boinc       100 Jan 27 15:08 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 18:05:06] -rwxr-xr-x 1 boinc boinc      7986 Jan 27 15:08 run_atlas
[2026-01-27 18:05:06] -rw-r--r-- 1 boinc boinc       105 Jan 27 15:08 job.xml
[2026-01-27 18:05:06] -rw-r--r-- 2 boinc boinc 498349487 Jan 27 15:08 EVNT.48318040._000046.pool.root.1
[2026-01-27 18:05:06] -rw-r--r-- 2 boinc boinc     15845 Jan 27 15:08 start_atlas.sh
[2026-01-27 18:05:06] drwxrwx--x 2 boinc boinc      4096 Jan 27 15:08 shared
[2026-01-27 18:05:06] -rw-r--r-- 2 boinc boinc    597760 Jan 27 15:08 input.tar.gz
[2026-01-27 18:05:06] -rw-r--r-- 1 boinc boinc      5959 Jan 27 15:08 init_data.xml
[2026-01-27 18:05:06] -rw-r--r-- 1 boinc boinc         0 Jan 27 15:08 boinc_setup_complete
[2026-01-27 18:05:06] -rw-r--r-- 1 boinc boinc         0 Jan 27 15:08 boinc_lockfile
[2026-01-27 18:05:06] -rw-r--r-- 1 boinc boinc      2534 Jan 27 15:08 pandaJob.out
[2026-01-27 18:05:06] -rw------- 1 boinc boinc   1004450 Jan 27 15:08 agis_schedconf.cvmfs.json
[2026-01-27 18:05:06] -rw------- 1 boinc boinc   1516246 Jan 27 15:08 agis_ddmendpoints.agis.ALL.json
[2026-01-27 18:05:06] -rw------- 1 boinc boinc       406 Jan 27 15:08 workernode_map.json
[2026-01-27 18:05:06] drwx------ 5 boinc boinc      4096 Jan 27 15:08 pilot3
[2026-01-27 18:05:06] -rw------- 1 boinc boinc 188208642 Jan 27 18:03 HITS.48318042._002313.pool.root.1
[2026-01-27 18:05:06] -rw-r--r-- 1 boinc boinc       531 Jan 27 18:03 boinc_task_state.xml
[2026-01-27 18:05:06] -rw------- 1 boinc boinc      1007 Jan 27 18:04 memory_monitor_summary.json
[2026-01-27 18:05:06] -rw------- 1 boinc boinc    379680 Jan 27 18:04 log.48318042._002313.job.log.tgz.1
[2026-01-27 18:05:06] -rw------- 1 boinc boinc      6241 Jan 27 18:04 heartbeat.json
[2026-01-27 18:05:06] -rw------- 1 boinc boinc        95 Jan 27 18:04 pilot_heartbeat.json
[2026-01-27 18:05:06] -rw-r--r-- 1 boinc boinc      8192 Jan 27 18:04 boinc_mmap_file
[2026-01-27 18:05:06] -rw-r--r-- 1 boinc boinc        28 Jan 27 18:04 wrapper_checkpoint.txt
[2026-01-27 18:05:06] -rw------- 1 boinc boinc      5400 Jan 27 18:05 pilotlog.txt
[2026-01-27 18:05:06] -rw------- 1 boinc boinc   1494808 Jan 27 18:05 log.48318042._002313.job.log.1
[2026-01-27 18:05:06] -rw------- 1 boinc boinc       357 Jan 27 18:05 output.list
[2026-01-27 18:05:06] -rw-r--r-- 1 boinc boinc       620 Jan 27 18:05 runtime_log
[2026-01-27 18:05:06] -rw------- 1 boinc boinc   1894400 Jan 27 18:05 result.tar.gz
[2026-01-27 18:05:06] -rw-r--r-- 1 boinc boinc      8778 Jan 27 18:05 runtime_log.err
[2026-01-27 18:05:06] -rw------- 1 boinc boinc       647 Jan 27 18:05 jKhNDmGAU48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmwG9KDmMqGtEn.diag
[2026-01-27 18:05:06] -rw-r--r-- 1 boinc boinc     21106 Jan 27 18:05 stderr.txt
[2026-01-27 18:05:06] HITS file was successfully produced:
[2026-01-27 18:05:06] -rw------- 1 boinc boinc 188208642 Jan 27 18:03 shared/HITS.pool.root.1
[2026-01-27 18:05:06]  *** Contents of shared directory: ***
[2026-01-27 18:05:06] total 672932
[2026-01-27 18:05:06] -rw-r--r-- 2 boinc boinc 498349487 Jan 27 15:08 ATLAS.root_0
[2026-01-27 18:05:06] -rw-r--r-- 2 boinc boinc     15845 Jan 27 15:08 start_atlas.sh
[2026-01-27 18:05:06] -rw-r--r-- 2 boinc boinc    597760 Jan 27 15:08 input.tar.gz
[2026-01-27 18:05:06] -rw------- 1 boinc boinc 188208642 Jan 27 18:03 HITS.pool.root.1
[2026-01-27 18:05:06] -rw------- 1 boinc boinc   1894400 Jan 27 18:05 result.tar.gz
18:05:08 (1851457): run_atlas exited; CPU time 41082.625071
18:05:08 (1851457): called boinc_finish(0)

</stderr_txt>
]]>

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