Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:40:44 (13359): wrapper (7.7.26015): starting
20:40:44 (13359): wrapper: running run_atlas (--nthreads 8)
[2026-01-26 20:40:44] Arguments: --nthreads 8
[2026-01-26 20:40:44] Threads: 8
[2026-01-26 20:40:44] Checking for CVMFS
[2026-01-26 20:40:44] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 20:40:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 20:40:44] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 20:40:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 20:40:44] 2.11.2.0 2698 161935 90220 155568 3 52 13684576 20275200 1 130560 0 42337917 99.876 8757301 29283 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-26 20:40:44] CVMFS is ok
[2026-01-26 20:40:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 20:40:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 20:40:44] Further information can be found at the LHC@home message board.
[2026-01-26 20:40:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 20:40:44] Checking for apptainer binary...
[2026-01-26 20:40:44] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 20:40:44] Running /usr/bin/apptainer --version
[2026-01-26 20:40:44] apptainer version 1.3.2-1.el7
[2026-01-26 20:40:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 20:40:46] c-204-2.aglt2.org
[2026-01-26 20:40:46] apptainer works
[2026-01-26 20:40:46] Set ATHENA_PROC_NUMBER=8
[2026-01-26 20:40:46] Set ATHENA_CORE_NUMBER=8
[2026-01-26 20:40:46] Starting ATLAS job with PandaID=6983467963
[2026-01-26 20:40:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 22:49:28]  *** The last 200 lines of the pilot log: ***
[2026-01-26 22:49:28] 2026-01-27 03:48:45,543 | INFO     | extracted standard info from prmon json
[2026-01-26 22:49:28] 2026-01-27 03:48:45,544 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 22:49:28] 2026-01-27 03:48:45,544 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 22:49:28] 2026-01-27 03:48:45,544 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 22:49:28] 2026-01-27 03:48:45,544 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 22:49:28] 2026-01-27 03:48:45,547 | INFO     | fitting pss+swap vs Time
[2026-01-26 22:49:28] 2026-01-27 03:48:45,547 | INFO     | sum of square deviations: 620244187.5
[2026-01-26 22:49:28] 2026-01-27 03:48:45,548 | INFO     | sum of deviations: -7231005757.999998
[2026-01-26 22:49:28] 2026-01-27 03:48:45,548 | INFO     | mean x: 1769481907.5
[2026-01-26 22:49:28] 2026-01-27 03:48:45,548 | INFO     | mean y: 2515223.1587301586
[2026-01-26 22:49:28] 2026-01-27 03:48:45,548 | INFO     | intersect: 20631703081.222004
[2026-01-26 22:49:28] 2026-01-27 03:48:45,549 | INFO     | chi2: 2.675769418541602
[2026-01-26 22:49:28] 2026-01-27 03:48:45,549 | INFO     | sum of square deviations: 549294020.0
[2026-01-26 22:49:28] 2026-01-27 03:48:45,549 | INFO     | sum of deviations: 2551884553.000002
[2026-01-26 22:49:28] 2026-01-27 03:48:45,550 | INFO     | mean x: 1769481755.0
[2026-01-26 22:49:28] 2026-01-27 03:48:45,550 | INFO     | mean y: 2535598.3305785125
[2026-01-26 22:49:28] 2026-01-27 03:48:45,550 | INFO     | intersect: -8218040255.380397
[2026-01-26 22:49:28] 2026-01-27 03:48:45,550 | INFO     | chi2: 1.6936748501981178
[2026-01-26 22:49:28] 2026-01-27 03:48:45,550 | INFO     | current chi2=1.6936748501981178 (change=36.70325856697936 %)
[2026-01-26 22:49:28] 2026-01-27 03:48:45,550 | INFO     | sum of square deviations: 483971865.0
[2026-01-26 22:49:28] 2026-01-27 03:48:45,551 | INFO     | sum of deviations: 2696127288.000011
[2026-01-26 22:49:28] 2026-01-27 03:48:45,551 | INFO     | mean x: 1769481602.5
[2026-01-26 22:49:28] 2026-01-27 03:48:45,551 | INFO     | mean y: 2535935.224137931
[2026-01-26 22:49:28] 2026-01-27 03:48:45,551 | INFO     | intersect: -9854953681.686213
[2026-01-26 22:49:28] 2026-01-27 03:48:45,552 | INFO     | chi2: 1.6957489965317483
[2026-01-26 22:49:28] 2026-01-27 03:48:45,552 | INFO     | current chi2=1.6957489965317483 (change=-0.12246425772856177 %)
[2026-01-26 22:49:28] 2026-01-27 03:48:45,552 | INFO     | right removable region: 115
[2026-01-26 22:49:28] 2026-01-27 03:48:45,552 | INFO     | sum of square deviations: 549294020.0
[2026-01-26 22:49:28] 2026-01-27 03:48:45,553 | INFO     | sum of deviations: -26826513144.0
[2026-01-26 22:49:28] 2026-01-27 03:48:45,553 | INFO     | mean x: 1769482060.0
[2026-01-26 22:49:28] 2026-01-27 03:48:45,553 | INFO     | mean y: 2556606.0165289254
[2026-01-26 22:49:28] 2026-01-27 03:48:45,553 | INFO     | intersect: 86420817159.19385
[2026-01-26 22:49:28] 2026-01-27 03:48:45,553 | INFO     | chi2: 1.1716640407241055
[2026-01-26 22:49:28] 2026-01-27 03:48:45,554 | INFO     | current chi2=1.1716640407241055 (change=56.21206997115963 %)
[2026-01-26 22:49:28] 2026-01-27 03:48:45,554 | INFO     | sum of square deviations: 483971865.0
[2026-01-26 22:49:28] 2026-01-27 03:48:45,554 | INFO     | sum of deviations: -25868327340.0
[2026-01-26 22:49:28] 2026-01-27 03:48:45,554 | INFO     | mean x: 1769482212.5
[2026-01-26 22:49:28] 2026-01-27 03:48:45,555 | INFO     | mean y: 2554232.0
[2026-01-26 22:49:28] 2026-01-27 03:48:45,555 | INFO     | intersect: 94581492400.76616
[2026-01-26 22:49:28] 2026-01-27 03:48:45,555 | INFO     | chi2: 1.1540800880772326
[2026-01-26 22:49:28] 2026-01-27 03:48:45,555 | INFO     | current chi2=1.1540800880772326 (change=1.500767458563097 %)
[2026-01-26 22:49:28] 2026-01-27 03:48:45,555 | INFO     | left removable region: 20
[2026-01-26 22:49:28] 2026-01-27 03:48:45,555 | INFO     | sum of square deviations: 265828240.0
[2026-01-26 22:49:28] 2026-01-27 03:48:45,556 | INFO     | sum of deviations: -8850527087.999998
[2026-01-26 22:49:28] 2026-01-27 03:48:45,556 | INFO     | mean x: 1769482182.0
[2026-01-26 22:49:28] 2026-01-27 03:48:45,556 | INFO     | mean y: 2560433.515789474
[2026-01-26 22:49:28] 2026-01-27 03:48:45,556 | INFO     | intersect: 58915977546.476944
[2026-01-26 22:49:28] 2026-01-27 03:48:45,556 | INFO     | chi2: 0.09548086723578122
[2026-01-26 22:49:28] 2026-01-27 03:48:45,557 | INFO     | current memory leak: -33.29 B/s (using 95 data points, chi2=0.10)
[2026-01-26 22:49:28] 2026-01-27 03:48:45,557 | INFO     | could have reported an average CPU frequency of 1679 MHz (8 samples)
[2026-01-26 22:49:28] 2026-01-27 03:48:45,557 | INFO     | ..............................
[2026-01-26 22:49:28] 2026-01-27 03:48:45,557 | INFO     | . Timing measurements:
[2026-01-26 22:49:28] 2026-01-27 03:48:45,557 | INFO     | . get job = 0 s
[2026-01-26 22:49:28] 2026-01-27 03:48:45,557 | INFO     | . initial setup = 8 s
[2026-01-26 22:49:28] 2026-01-27 03:48:45,558 | INFO     | . payload setup = 8 s
[2026-01-26 22:49:28] 2026-01-27 03:48:45,558 | INFO     | . stage-in = 0 s
[2026-01-26 22:49:28] 2026-01-27 03:48:45,558 | INFO     | . payload execution = 7631 s
[2026-01-26 22:49:28] 2026-01-27 03:48:45,558 | INFO     | . stage-out = 0 s
[2026-01-26 22:49:28] 2026-01-27 03:48:45,558 | INFO     | . log creation = 0 s
[2026-01-26 22:49:28] 2026-01-27 03:48:45,558 | INFO     | ..............................
[2026-01-26 22:49:28] 2026-01-27 03:48:45,641 | INFO     | 
[2026-01-26 22:49:28] 2026-01-27 03:48:45,641 | INFO     | job summary report
[2026-01-26 22:49:28] 2026-01-27 03:48:45,641 | INFO     | --------------------------------------------------
[2026-01-26 22:49:28] 2026-01-27 03:48:45,642 | INFO     | PanDA job id: 6983467963
[2026-01-26 22:49:28] 2026-01-27 03:48:45,642 | INFO     | task id: 48318034
[2026-01-26 22:49:28] 2026-01-27 03:48:45,642 | INFO     | errors: (none)
[2026-01-26 22:49:28] 2026-01-27 03:48:45,642 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 22:49:28] 2026-01-27 03:48:45,642 | INFO     | pilot state: finished 
[2026-01-26 22:49:28] 2026-01-27 03:48:45,642 | INFO     | transexitcode: 0
[2026-01-26 22:49:28] 2026-01-27 03:48:45,643 | INFO     | exeerrorcode: 0
[2026-01-26 22:49:28] 2026-01-27 03:48:45,643 | INFO     | exeerrordiag: 
[2026-01-26 22:49:28] 2026-01-27 03:48:45,643 | INFO     | exitcode: 0
[2026-01-26 22:49:28] 2026-01-27 03:48:45,643 | INFO     | exitmsg: OK
[2026-01-26 22:49:28] 2026-01-27 03:48:45,643 | INFO     | cpuconsumptiontime: 56386 s
[2026-01-26 22:49:28] 2026-01-27 03:48:45,643 | INFO     | nevents: 400
[2026-01-26 22:49:28] 2026-01-27 03:48:45,644 | INFO     | neventsw: 0
[2026-01-26 22:49:28] 2026-01-27 03:48:45,644 | INFO     | pid: 21473
[2026-01-26 22:49:28] 2026-01-27 03:48:45,644 | INFO     | pgrp: 21473
[2026-01-26 22:49:28] 2026-01-27 03:48:45,644 | INFO     | corecount: 8
[2026-01-26 22:49:28] 2026-01-27 03:48:45,644 | INFO     | event service: False
[2026-01-26 22:49:28] 2026-01-27 03:48:45,645 | INFO     | sizes: {0: 2283987, 1: 2284193, 11: 2284221, 7643: 2311838, 7644: 2320836, 7645: 2321214}
[2026-01-26 22:49:28] 2026-01-27 03:48:45,645 | INFO     | --------------------------------------------------
[2026-01-26 22:49:28] 2026-01-27 03:48:45,645 | INFO     | 
[2026-01-26 22:49:28] 2026-01-27 03:48:45,645 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-26 22:49:28] 2026-01-27 03:48:45,675 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 22:49:28] 2026-01-27 03:48:45,676 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 22:49:28] 2026-01-27 03:48:45,676 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 22:49:28] 2026-01-27 03:48:45,676 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 22:49:28] 2026-01-27 03:48:45,676 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 22:49:28] 2026-01-27 03:48:45,677 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 22:49:28] 2026-01-27 03:48:45,677 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 22:49:28] 2026-01-27 03:48:45,677 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 22:49:28] 2026-01-27 03:48:45,677 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 22:49:28] 2026-01-27 03:48:45,677 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 22:49:28] 2026-01-27 03:48:45,677 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 22:49:28] 2026-01-27 03:48:45,678 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 22:49:28] 2026-01-27 03:48:45,678 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 22:49:28] 2026-01-27 03:48:45,678 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 22:49:28] 2026-01-27 03:48:45,678 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 22:49:28] 2026-01-27 03:48:45,678 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 22:49:28] 2026-01-27 03:48:45,678 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 22:49:28] 2026-01-27 03:48:45,679 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 22:49:28] 2026-01-27 03:48:45,679 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 22:49:28] 2026-01-27 03:48:45,679 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 22:49:28] 2026-01-27 03:48:45,679 | INFO     | job 6983467963 has completed (purged errors)
[2026-01-26 22:49:28] 2026-01-27 03:48:45,679 | INFO     | overall cleanup function is called
[2026-01-26 22:49:28] 2026-01-27 03:48:46,688 | INFO     | --- collectZombieJob: --- 10, [21473]
[2026-01-26 22:49:28] 2026-01-27 03:48:46,688 | INFO     | zombie collector waiting for pid 21473
[2026-01-26 22:49:28] 2026-01-27 03:48:46,688 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 22:49:28] 2026-01-27 03:48:46,688 | INFO     | collected zombie processes
[2026-01-26 22:49:28] 2026-01-27 03:48:46,688 | INFO     | will attempt to kill all subprocesses of pid=21473
[2026-01-26 22:49:28] 2026-01-27 03:48:46,754 | INFO     | process IDs to be killed: [21473] (in reverse order)
[2026-01-26 22:49:28] 2026-01-27 03:48:46,808 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 22:49:28] 2026-01-27 03:48:46,808 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 22:49:28] 2026-01-27 03:48:46,811 | INFO     | did not find any defunct processes belonging to 21473
[2026-01-26 22:49:28] 2026-01-27 03:48:46,814 | INFO     | did not find any defunct processes belonging to 21473
[2026-01-26 22:49:28] 2026-01-27 03:48:46,815 | INFO     | ready for new job
[2026-01-26 22:49:28] 2026-01-27 03:48:46,815 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 22:49:28] 2026-01-27 03:48:46,817 | INFO     | **************************************
[2026-01-26 22:49:28] 2026-01-27 03:48:46,817 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 22:49:28] 2026-01-27 03:48:46,817 | INFO     | **************************************
[2026-01-26 22:49:28] 2026-01-27 03:48:46,817 | INFO     | 
[2026-01-26 22:49:28] 2026-01-27 03:48:46,818 | INFO     | architecture information:
[2026-01-26 22:49:28] 2026-01-27 03:48:46,818 | INFO     | executing command: cat /etc/os-release
[2026-01-26 22:49:28] 2026-01-27 03:48:46,837 | INFO     | cat /etc/os-release:
[2026-01-26 22:49:28] NAME="CentOS Linux"
[2026-01-26 22:49:28] VERSION="7 (Core)"
[2026-01-26 22:49:28] ID="centos"
[2026-01-26 22:49:28] ID_LIKE="rhel fedora"
[2026-01-26 22:49:28] VERSION_ID="7"
[2026-01-26 22:49:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 22:49:28] ANSI_COLOR="0;31"
[2026-01-26 22:49:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 22:49:28] HOME_URL="https://www.centos.org/"
[2026-01-26 22:49:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 22:49:28] 
[2026-01-26 22:49:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 22:49:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 22:49:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 22:49:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 22:49:28] 
[2026-01-26 22:49:28] 2026-01-27 03:48:46,837 | INFO     | **************************************
[2026-01-26 22:49:28] 2026-01-27 03:48:47,340 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-26 22:49:28] 2026-01-27 03:48:47,361 | INFO     | sufficient remaining disk space (18028167168 B)
[2026-01-26 22:49:28] 2026-01-27 03:48:47,361 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 22:49:28] 2026-01-27 03:48:47,362 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 22:49:28] 2026-01-27 03:48:47,362 | INFO     | update_server=False
[2026-01-26 22:49:28] 2026-01-27 03:48:47,362 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 22:49:28] 2026-01-27 03:48:47,363 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 22:49:28] 2026-01-27 03:48:47,363 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 22:49:28] 2026-01-27 03:48:47,840 | INFO     | all payload control threads have been joined
[2026-01-26 22:49:28] 2026-01-27 03:48:47,936 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 22:49:28] 2026-01-27 03:48:47,951 | INFO     | all data control threads have been joined
[2026-01-26 22:49:28] 2026-01-27 03:48:48,348 | WARNING  | process 21473 can no longer be monitored (due to stat problems) - aborting
[2026-01-26 22:49:28] 2026-01-27 03:48:48,367 | INFO     | [job] retrieve thread has finished
[2026-01-26 22:49:28] 2026-01-27 03:48:48,368 | INFO     | [job] queue monitor thread has finished
[2026-01-26 22:49:28] 2026-01-27 03:48:48,404 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 22:49:28] 2026-01-27 03:48:48,467 | INFO     | number of running child processes to parent process 21473: 1
[2026-01-26 22:49:28] 2026-01-27 03:48:48,467 | INFO     | maximum number of monitored processes: 6
[2026-01-26 22:49:28] 2026-01-27 03:48:48,467 | INFO     | aborting job monitoring since job object (job id=6983467963) has expired
[2026-01-26 22:49:28] 2026-01-27 03:48:48,467 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 22:49:28] 2026-01-27 03:48:48,467 | INFO     | will abort loop
[2026-01-26 22:49:28] 2026-01-27 03:48:48,563 | INFO     | all job control threads have been joined
[2026-01-26 22:49:28] 2026-01-27 03:48:48,574 | INFO     | [data] copytool_in thread has finished
[2026-01-26 22:49:28] 2026-01-27 03:48:48,846 | INFO     | [payload] control thread has finished
[2026-01-26 22:49:28] 2026-01-27 03:48:48,957 | INFO     | [data] control thread has finished
[2026-01-26 22:49:28] 2026-01-27 03:48:49,040 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 22:49:28] 2026-01-27 03:48:49,266 | INFO     | [job] validate thread has finished
[2026-01-26 22:49:28] 2026-01-27 03:48:49,415 | INFO     | [payload] failed_post thread has finished
[2026-01-26 22:49:28] 2026-01-27 03:48:49,424 | INFO     | [payload] validate_post thread has finished
[2026-01-26 22:49:28] 2026-01-27 03:48:49,473 | INFO     | [job] job monitor thread has finished
[2026-01-26 22:49:28] 2026-01-27 03:48:49,569 | INFO     | [job] control thread has finished
[2026-01-26 22:49:28] 2026-01-27 03:48:49,627 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 22:49:28] 2026-01-27 03:48:49,634 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 22:49:28] 2026-01-27 03:48:49,942 | INFO     | [data] copytool_out thread has finished
[2026-01-26 22:49:28] 2026-01-27 03:48:51,369 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 22:49:28] 2026-01-27 03:48:57,433 | INFO     | job.realtimelogging is not enabled
[2026-01-26 22:49:28] 2026-01-27 03:48:58,439 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 22:49:28] 2026-01-27 03:49:17,142 | INFO     | PID=17052 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-26 22:49:28] 2026-01-27 03:49:17,142 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 22:49:28] 2026-01-27 03:49:17,142 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 22:49:28] 2026-01-27 03:49:17,142 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 22:49:28] 2026-01-27 03:49:21,125 | INFO     | [monitor] cgroup control has ended
[2026-01-26 22:49:28] 2026-01-27 03:49:23,198 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139885819086656)>', '<ExcThread(monitor, started 139884719232768)>']
[2026-01-26 22:49:28] 2026-01-27 03:49:24,178 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 22:49:28] 2026-01-27 03:49:24,178 | INFO     | [monitor] control thread has ended
[2026-01-26 22:49:28] 2026-01-27 03:49:28,223 | INFO     | all workflow threads have been joined
[2026-01-26 22:49:28] 2026-01-27 03:49:28,224 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 22:49:28] 2026-01-27 03:49:28,224 | INFO     | traces error code: 0
[2026-01-26 22:49:28] 2026-01-27 03:49:28,224 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 22:49:28] 2026-01-27 03:49:28,341 [wrapper] ==== pilot stdout END ====
[2026-01-26 22:49:28] 2026-01-27 03:49:28,345 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 22:49:28] 2026-01-27 03:49:28,350 [wrapper] pilotpid: 17052
[2026-01-26 22:49:28] 2026-01-27 03:49:28,354 [wrapper] Pilot exit status: 0
[2026-01-26 22:49:28] 2026-01-27 03:49:28,372 [wrapper] pandaids: 6983467963
[2026-01-26 22:49:28] 2026-01-27 03:49:28,415 [wrapper] cleanup supervisor_pilot  8486 17053
[2026-01-26 22:49:28] 2026-01-27 03:49:28,420 [wrapper] Test setup, not cleaning
[2026-01-26 22:49:28] 2026-01-27 03:49:28,425 [wrapper] apfmon messages muted
[2026-01-26 22:49:28] 2026-01-27 03:49:28,430 [wrapper] ==== wrapper stdout END ====
[2026-01-26 22:49:28] 2026-01-27 03:49:28,434 [wrapper] ==== wrapper stderr END ====
[2026-01-26 22:49:28]  *** Error codes and diagnostics ***
[2026-01-26 22:49:28]     "exeErrorCode": 0,
[2026-01-26 22:49:28]     "exeErrorDiag": "",
[2026-01-26 22:49:28]     "pilotErrorCode": 0,
[2026-01-26 22:49:28]     "pilotErrorDiag": "",
[2026-01-26 22:49:28]  *** Listing of results directory ***
[2026-01-26 22:49:28] total 669396
[2026-01-26 22:49:28] -rw-r--r-- 1 boincer umatlas    584422 Jan 25 17:54 pilot3.tar.gz
[2026-01-26 22:49:28] -rw-r--r-- 1 boincer umatlas      5111 Jan 25 17:54 queuedata.json
[2026-01-26 22:49:28] -rwx------ 1 boincer umatlas     36322 Jan 25 17:54 runpilot2-wrapper.sh
[2026-01-26 22:49:28] -rw-r--r-- 1 boincer umatlas       100 Jan 26 20:40 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 22:49:28] -rwxr-xr-x 1 boincer umatlas      7986 Jan 26 20:40 run_atlas
[2026-01-26 22:49:28] -rw-r--r-- 1 boincer umatlas       105 Jan 26 20:40 job.xml
[2026-01-26 22:49:28] -rw-r--r-- 2 boincer umatlas 494208167 Jan 26 20:40 EVNT.48318032._000050.pool.root.1
[2026-01-26 22:49:28] -rw-r--r-- 2 boincer umatlas    597750 Jan 26 20:40 input.tar.gz
[2026-01-26 22:49:28] -rw-r--r-- 2 boincer umatlas     15845 Jan 26 20:40 start_atlas.sh
[2026-01-26 22:49:28] drwxrwx--x 2 boincer umatlas      4096 Jan 26 20:40 shared
[2026-01-26 22:49:28] -rw-r--r-- 1 boincer umatlas         0 Jan 26 20:40 boinc_lockfile
[2026-01-26 22:49:28] -rw-r--r-- 1 boincer umatlas      2529 Jan 26 20:40 pandaJob.out
[2026-01-26 22:49:28] -rw------- 1 boincer umatlas        57 Jan 26 20:40 setup.sh.local
[2026-01-26 22:49:28] -rw------- 1 boincer umatlas   1006441 Jan 26 20:41 agis_schedconf.cvmfs.json
[2026-01-26 22:49:28] -rw------- 1 boincer umatlas   1516246 Jan 26 20:41 agis_ddmendpoints.agis.ALL.json
[2026-01-26 22:49:28] -rw------- 1 boincer umatlas       431 Jan 26 20:41 workernode_map.json
[2026-01-26 22:49:28] drwx------ 5 boincer umatlas      4096 Jan 26 20:41 pilot3
[2026-01-26 22:49:28] -rw------- 1 boincer umatlas 184417199 Jan 26 22:48 HITS.48318034._002001.pool.root.1
[2026-01-26 22:49:28] -rw-r--r-- 1 boincer umatlas      5909 Jan 26 22:48 init_data.xml
[2026-01-26 22:49:28] -rw-r--r-- 1 boincer umatlas       530 Jan 26 22:48 boinc_task_state.xml
[2026-01-26 22:49:28] -rw------- 1 boincer umatlas        95 Jan 26 22:48 pilot_heartbeat.json
[2026-01-26 22:49:28] -rw------- 1 boincer umatlas      1046 Jan 26 22:48 memory_monitor_summary.json
[2026-01-26 22:49:28] -rw------- 1 boincer umatlas    358072 Jan 26 22:48 log.48318034._002001.job.log.tgz.1
[2026-01-26 22:49:28] -rw------- 1 boincer umatlas      6394 Jan 26 22:48 heartbeat.json
[2026-01-26 22:49:28] -rw-r--r-- 1 boincer umatlas      8192 Jan 26 22:49 boinc_mmap_file
[2026-01-26 22:49:28] -rw-r--r-- 1 boincer umatlas        27 Jan 26 22:49 wrapper_checkpoint.txt
[2026-01-26 22:49:28] -rw------- 1 boincer umatlas      5331 Jan 26 22:49 pilotlog.txt
[2026-01-26 22:49:28] -rw------- 1 boincer umatlas   1086609 Jan 26 22:49 log.48318034._002001.job.log.1
[2026-01-26 22:49:28] -rw------- 1 boincer umatlas       357 Jan 26 22:49 output.list
[2026-01-26 22:49:28] -rw-r--r-- 1 boincer umatlas       620 Jan 26 22:49 runtime_log
[2026-01-26 22:49:28] -rw------- 1 boincer umatlas   1464320 Jan 26 22:49 result.tar.gz
[2026-01-26 22:49:28] -rw-r--r-- 1 boincer umatlas      9336 Jan 26 22:49 runtime_log.err
[2026-01-26 22:49:28] -rw------- 1 boincer umatlas       657 Jan 26 22:49 9IhLDmPBO48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmxx1KDmFJiDcn.diag
[2026-01-26 22:49:28] -rw-r--r-- 1 boincer umatlas     21008 Jan 26 22:49 stderr.txt
[2026-01-26 22:49:28] HITS file was successfully produced:
[2026-01-26 22:49:28] -rw------- 1 boincer umatlas 184417199 Jan 26 22:48 shared/HITS.pool.root.1
[2026-01-26 22:49:28]  *** Contents of shared directory: ***
[2026-01-26 22:49:28] total 664760
[2026-01-26 22:49:28] -rw-r--r-- 2 boincer umatlas 494208167 Jan 26 20:40 ATLAS.root_0
[2026-01-26 22:49:28] -rw-r--r-- 2 boincer umatlas    597750 Jan 26 20:40 input.tar.gz
[2026-01-26 22:49:28] -rw-r--r-- 2 boincer umatlas     15845 Jan 26 20:40 start_atlas.sh
[2026-01-26 22:49:28] -rw------- 1 boincer umatlas 184417199 Jan 26 22:48 HITS.pool.root.1
[2026-01-26 22:49:28] -rw------- 1 boincer umatlas   1464320 Jan 26 22:49 result.tar.gz
22:49:30 (13359): run_atlas exited; CPU time 56344.082699
22:49:30 (13359): called boinc_finish(0)

</stderr_txt>
]]>

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