Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:27:26 (3101568): wrapper (7.7.26015): starting
07:27:26 (3101568): wrapper: running run_atlas (--nthreads 4)
[2026-01-28 07:27:26] Arguments: --nthreads 4
[2026-01-28 07:27:26] Threads: 4
[2026-01-28 07:27:26] Checking for CVMFS
[2026-01-28 07:27:26] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-28 07:27:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-28 07:27:29] Running cvmfs_config stat atlas.cern.ch
[2026-01-28 07:27:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-28 07:27:30] 2.13.3.0 897907 10174 63020 155598 1 49 4110401 6144001 2733 130560 0 14769669 99.982 531153 110 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://192.168.1.253:3128 1
[2026-01-28 07:27:30] CVMFS is ok
[2026-01-28 07:27:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-28 07:27:30] Checking for apptainer binary...
[2026-01-28 07:27:30] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-28 07:27:30] Running /usr/bin/apptainer --version
[2026-01-28 07:27:30] apptainer version 1.4.0
[2026-01-28 07:27:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-28 07:27:30] Zen
[2026-01-28 07:27:30] apptainer works
[2026-01-28 07:27:30] Set ATHENA_PROC_NUMBER=4
[2026-01-28 07:27:30] Set ATHENA_CORE_NUMBER=4
[2026-01-28 07:27:30] Starting ATLAS job with PandaID=6983015874
[2026-01-28 07:27:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/michael/Boinc/BOINC/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
08:34:13 (5179): wrapper (7.7.26015): starting
08:34:13 (5179): wrapper: running run_atlas (--nthreads 4)
[2026-01-28 08:34:13] Arguments: --nthreads 4
[2026-01-28 08:34:13] Threads: 4
[2026-01-28 08:34:13] This job has been restarted, cleaning up previous attempt
[2026-01-28 08:34:13] Checking for CVMFS
[2026-01-28 08:34:18] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-28 08:34:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-28 08:34:20] Running cvmfs_config stat atlas.cern.ch
[2026-01-28 08:34:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-28 08:34:20] 2.13.3.0 6505 0 25412 155599 3 1 4115580 6144000 0 130560 0 6 90.909 0 0 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://192.168.1.253:3128 1
[2026-01-28 08:34:20] CVMFS is ok
[2026-01-28 08:34:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-28 08:34:20] Checking for apptainer binary...
[2026-01-28 08:34:20] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-28 08:34:20] Running /usr/bin/apptainer --version
[2026-01-28 08:34:20] apptainer version 1.4.0
[2026-01-28 08:34:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-28 08:34:21] Zen
[2026-01-28 08:34:21] apptainer works
[2026-01-28 08:34:21] Set ATHENA_PROC_NUMBER=4
[2026-01-28 08:34:21] Set ATHENA_CORE_NUMBER=4
[2026-01-28 08:34:21] Starting ATLAS job with PandaID=6983015874
[2026-01-28 08:34:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/michael/Boinc/BOINC/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-28 10:21:52]  *** The last 200 lines of the pilot log: ***
[2026-01-28 10:21:52] 2026-01-27 23:20:45,545 | INFO     | log transfer has been attempted: DONE
[2026-01-28 10:21:52] 2026-01-27 23:20:45,545 | INFO     | job 6983015874 has finished - writing final server update
[2026-01-28 10:21:52] 2026-01-27 23:20:45,546 | INFO     | total number of processed events: 400 (read)
[2026-01-28 10:21:52] 2026-01-27 23:20:45,549 | INFO     | using path: /home/michael/Boinc/BOINC/slots/0/PanDA_Pilot-6983015874/memory_monitor_summary.json (trf name=prmon)
[2026-01-28 10:21:52] 2026-01-27 23:20:45,549 | INFO     | extracted standard info from prmon json
[2026-01-28 10:21:52] 2026-01-27 23:20:45,549 | INFO     | extracted standard memory fields from prmon json
[2026-01-28 10:21:52] 2026-01-27 23:20:45,549 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-28 10:21:52] 2026-01-27 23:20:45,550 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-28 10:21:52] 2026-01-27 23:20:45,550 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-28 10:21:52] 2026-01-27 23:20:45,551 | INFO     | fitting pss+swap vs Time
[2026-01-28 10:21:52] 2026-01-27 23:20:45,551 | INFO     | sum of square deviations: 358927660.0
[2026-01-28 10:21:52] 2026-01-27 23:20:45,552 | INFO     | sum of deviations: 6514680867.000001
[2026-01-28 10:21:52] 2026-01-27 23:20:45,552 | INFO     | mean x: 1769552865.0
[2026-01-28 10:21:52] 2026-01-27 23:20:45,552 | INFO     | mean y: 2277682.6285714284
[2026-01-28 10:21:52] 2026-01-27 23:20:45,552 | INFO     | intersect: -32115815954.29129
[2026-01-28 10:21:52] 2026-01-27 23:20:45,552 | INFO     | chi2: 2.590673677359981
[2026-01-28 10:21:52] 2026-01-27 23:20:45,552 | INFO     | sum of square deviations: 310052325.0
[2026-01-28 10:21:52] 2026-01-27 23:20:45,553 | INFO     | sum of deviations: 12209442739.0
[2026-01-28 10:21:52] 2026-01-27 23:20:45,553 | INFO     | mean x: 1769552712.5
[2026-01-28 10:21:52] 2026-01-27 23:20:45,553 | INFO     | mean y: 2294739.22
[2026-01-28 10:21:52] 2026-01-27 23:20:45,553 | INFO     | intersect: -69680306469.8207
[2026-01-28 10:21:52] 2026-01-27 23:20:45,553 | INFO     | chi2: 1.9416290709730653
[2026-01-28 10:21:52] 2026-01-27 23:20:45,553 | INFO     | current chi2=1.9416290709730653 (change=25.053120817914937 %)
[2026-01-28 10:21:52] 2026-01-27 23:20:45,553 | INFO     | sum of square deviations: 265828240.0
[2026-01-28 10:21:52] 2026-01-27 23:20:45,554 | INFO     | sum of deviations: 11861400346.0
[2026-01-28 10:21:52] 2026-01-27 23:20:45,554 | INFO     | mean x: 1769552560.0
[2026-01-28 10:21:52] 2026-01-27 23:20:45,554 | INFO     | mean y: 2293538.042105263
[2026-01-28 10:21:52] 2026-01-27 23:20:45,554 | INFO     | intersect: -78956102106.63878
[2026-01-28 10:21:52] 2026-01-27 23:20:45,554 | INFO     | chi2: 1.9464287973535965
[2026-01-28 10:21:52] 2026-01-27 23:20:45,554 | INFO     | current chi2=1.9464287973535965 (change=-0.24720099489063843 %)
[2026-01-28 10:21:52] 2026-01-27 23:20:45,554 | INFO     | right removable region: 94
[2026-01-28 10:21:52] 2026-01-27 23:20:45,554 | INFO     | sum of square deviations: 310052325.0
[2026-01-28 10:21:52] 2026-01-27 23:20:45,555 | INFO     | sum of deviations: -11491868537.500002
[2026-01-28 10:21:52] 2026-01-27 23:20:45,555 | INFO     | mean x: 1769553017.5
[2026-01-28 10:21:52] 2026-01-27 23:20:45,555 | INFO     | mean y: 2332894.39
[2026-01-28 10:21:52] 2026-01-27 23:20:45,555 | INFO     | intersect: 65589554816.51698
[2026-01-28 10:21:52] 2026-01-27 23:20:45,555 | INFO     | chi2: 0.70276569699461
[2026-01-28 10:21:52] 2026-01-27 23:20:45,555 | INFO     | current chi2=0.70276569699461 (change=72.87324516645565 %)
[2026-01-28 10:21:52] 2026-01-27 23:20:45,555 | INFO     | sum of square deviations: 265828240.0
[2026-01-28 10:21:52] 2026-01-27 23:20:45,555 | INFO     | sum of deviations: -10867777812.0
[2026-01-28 10:21:52] 2026-01-27 23:20:45,556 | INFO     | mean x: 1769553170.0
[2026-01-28 10:21:52] 2026-01-27 23:20:45,556 | INFO     | mean y: 2330726.8105263156
[2026-01-28 10:21:52] 2026-01-27 23:20:45,556 | INFO     | intersect: 72346452924.21237
[2026-01-28 10:21:52] 2026-01-27 23:20:45,556 | INFO     | chi2: 0.7022242935648673
[2026-01-28 10:21:52] 2026-01-27 23:20:45,556 | INFO     | current chi2=0.7022242935648673 (change=0.07703896648030185 %)
[2026-01-28 10:21:52] 2026-01-27 23:20:45,556 | INFO     | left removable region: 20
[2026-01-28 10:21:52] 2026-01-27 23:20:45,556 | INFO     | sum of square deviations: 125630262.5
[2026-01-28 10:21:52] 2026-01-27 23:20:45,556 | INFO     | sum of deviations: -3271955271.0000005
[2026-01-28 10:21:52] 2026-01-27 23:20:45,556 | INFO     | mean x: 1769553139.5
[2026-01-28 10:21:52] 2026-01-27 23:20:45,556 | INFO     | mean y: 2349330.378378378
[2026-01-28 10:21:52] 2026-01-27 23:20:45,556 | INFO     | intersect: 46089164775.03786
[2026-01-28 10:21:52] 2026-01-27 23:20:45,557 | INFO     | chi2: 0.010481169680145466
[2026-01-28 10:21:52] 2026-01-27 23:20:45,557 | INFO     | current memory leak: -26.04 B/s (using 74 data points, chi2=0.01)
[2026-01-28 10:21:52] 2026-01-27 23:20:45,557 | INFO     | could have reported an average CPU frequency of 4150 MHz (7 samples)
[2026-01-28 10:21:52] 2026-01-27 23:20:45,557 | INFO     | ..............................
[2026-01-28 10:21:52] 2026-01-27 23:20:45,557 | INFO     | . Timing measurements:
[2026-01-28 10:21:52] 2026-01-27 23:20:45,557 | INFO     | . get job = 0 s
[2026-01-28 10:21:52] 2026-01-27 23:20:45,557 | INFO     | . initial setup = 0 s
[2026-01-28 10:21:52] 2026-01-27 23:20:45,557 | INFO     | . payload setup = 4 s
[2026-01-28 10:21:52] 2026-01-27 23:20:45,557 | INFO     | . stage-in = 0 s
[2026-01-28 10:21:52] 2026-01-27 23:20:45,557 | INFO     | . payload execution = 6349 s
[2026-01-28 10:21:52] 2026-01-27 23:20:45,557 | INFO     | . stage-out = 0 s
[2026-01-28 10:21:52] 2026-01-27 23:20:45,557 | INFO     | . log creation = 0 s
[2026-01-28 10:21:52] 2026-01-27 23:20:45,557 | INFO     | ..............................
[2026-01-28 10:21:52] 2026-01-27 23:20:45,829 | INFO     | 
[2026-01-28 10:21:52] 2026-01-27 23:20:45,830 | INFO     | job summary report
[2026-01-28 10:21:52] 2026-01-27 23:20:45,830 | INFO     | --------------------------------------------------
[2026-01-28 10:21:52] 2026-01-27 23:20:45,830 | INFO     | PanDA job id: 6983015874
[2026-01-28 10:21:52] 2026-01-27 23:20:45,830 | INFO     | task id: 48317931
[2026-01-28 10:21:52] 2026-01-27 23:20:45,830 | INFO     | errors: (none)
[2026-01-28 10:21:52] 2026-01-27 23:20:45,830 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-28 10:21:52] 2026-01-27 23:20:45,830 | INFO     | pilot state: finished 
[2026-01-28 10:21:52] 2026-01-27 23:20:45,830 | INFO     | transexitcode: 0
[2026-01-28 10:21:52] 2026-01-27 23:20:45,830 | INFO     | exeerrorcode: 0
[2026-01-28 10:21:52] 2026-01-27 23:20:45,830 | INFO     | exeerrordiag: 
[2026-01-28 10:21:52] 2026-01-27 23:20:45,830 | INFO     | exitcode: 0
[2026-01-28 10:21:52] 2026-01-27 23:20:45,830 | INFO     | exitmsg: OK
[2026-01-28 10:21:52] 2026-01-27 23:20:45,830 | INFO     | cpuconsumptiontime: 24271 s
[2026-01-28 10:21:52] 2026-01-27 23:20:45,830 | INFO     | nevents: 400
[2026-01-28 10:21:52] 2026-01-27 23:20:45,830 | INFO     | neventsw: 0
[2026-01-28 10:21:52] 2026-01-27 23:20:45,830 | INFO     | pid: 32067
[2026-01-28 10:21:52] 2026-01-27 23:20:45,830 | INFO     | pgrp: 32067
[2026-01-28 10:21:52] 2026-01-27 23:20:45,830 | INFO     | corecount: 4
[2026-01-28 10:21:52] 2026-01-27 23:20:45,831 | INFO     | event service: False
[2026-01-28 10:21:52] 2026-01-27 23:20:45,831 | INFO     | sizes: {0: 2284187, 11: 2284187, 6356: 2311189, 6357: 2320265, 6359: 2320403}
[2026-01-28 10:21:52] 2026-01-27 23:20:45,831 | INFO     | --------------------------------------------------
[2026-01-28 10:21:52] 2026-01-27 23:20:45,831 | INFO     | 
[2026-01-28 10:21:52] 2026-01-27 23:20:45,831 | INFO     | executing command: ls -lF /home/michael/Boinc/BOINC/slots/0
[2026-01-28 10:21:52] 2026-01-27 23:20:45,857 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-28 10:21:52] 2026-01-27 23:20:45,857 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-28 10:21:52] 2026-01-27 23:20:45,857 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-28 10:21:52] 2026-01-27 23:20:45,857 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-28 10:21:52] 2026-01-27 23:20:45,857 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-28 10:21:52] 2026-01-27 23:20:45,857 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-28 10:21:52] 2026-01-27 23:20:45,857 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-28 10:21:52] 2026-01-27 23:20:45,857 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-28 10:21:52] 2026-01-27 23:20:45,857 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-28 10:21:52] 2026-01-27 23:20:45,857 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-28 10:21:52] 2026-01-27 23:20:45,857 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-28 10:21:52] 2026-01-27 23:20:45,857 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-28 10:21:52] 2026-01-27 23:20:45,857 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-28 10:21:52] 2026-01-27 23:20:45,858 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-28 10:21:52] 2026-01-27 23:20:45,858 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-28 10:21:52] 2026-01-27 23:20:45,858 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-28 10:21:52] 2026-01-27 23:20:45,858 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-28 10:21:52] 2026-01-27 23:20:45,858 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-28 10:21:52] 2026-01-27 23:20:45,858 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-28 10:21:52] 2026-01-27 23:20:45,858 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-28 10:21:52] 2026-01-27 23:20:45,858 | INFO     | job 6983015874 has completed (purged errors)
[2026-01-28 10:21:52] 2026-01-27 23:20:45,858 | INFO     | overall cleanup function is called
[2026-01-28 10:21:52] 2026-01-27 23:20:46,863 | INFO     | --- collectZombieJob: --- 10, [32067]
[2026-01-28 10:21:52] 2026-01-27 23:20:46,864 | INFO     | zombie collector waiting for pid 32067
[2026-01-28 10:21:52] 2026-01-27 23:20:46,864 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-28 10:21:52] 2026-01-27 23:20:46,864 | INFO     | collected zombie processes
[2026-01-28 10:21:52] 2026-01-27 23:20:46,864 | INFO     | will attempt to kill all subprocesses of pid=32067
[2026-01-28 10:21:52] 2026-01-27 23:20:47,031 | INFO     | process IDs to be killed: [32067] (in reverse order)
[2026-01-28 10:21:52] 2026-01-27 23:20:47,090 | WARNING  | found no corresponding commands to process id(s)
[2026-01-28 10:21:52] 2026-01-27 23:20:47,091 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-28 10:21:52] 2026-01-27 23:20:47,095 | INFO     | did not find any defunct processes belonging to 32067
[2026-01-28 10:21:52] 2026-01-27 23:20:47,099 | INFO     | did not find any defunct processes belonging to 32067
[2026-01-28 10:21:52] 2026-01-27 23:20:47,099 | INFO     | ready for new job
[2026-01-28 10:21:52] 2026-01-27 23:20:47,099 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-28 10:21:52] 2026-01-27 23:20:47,100 | INFO     | **************************************
[2026-01-28 10:21:52] 2026-01-27 23:20:47,100 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-28 10:21:52] 2026-01-27 23:20:47,100 | INFO     | **************************************
[2026-01-28 10:21:52] 2026-01-27 23:20:47,100 | INFO     | 
[2026-01-28 10:21:52] 2026-01-27 23:20:47,102 | INFO     | architecture information:
[2026-01-28 10:21:52] 2026-01-27 23:20:47,102 | INFO     | executing command: cat /etc/os-release
[2026-01-28 10:21:52] 2026-01-27 23:20:47,115 | INFO     | cat /etc/os-release:
[2026-01-28 10:21:52] NAME="CentOS Linux"
[2026-01-28 10:21:52] VERSION="7 (Core)"
[2026-01-28 10:21:52] ID="centos"
[2026-01-28 10:21:52] ID_LIKE="rhel fedora"
[2026-01-28 10:21:52] VERSION_ID="7"
[2026-01-28 10:21:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-28 10:21:52] ANSI_COLOR="0;31"
[2026-01-28 10:21:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-28 10:21:52] HOME_URL="https://www.centos.org/"
[2026-01-28 10:21:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-28 10:21:52] 
[2026-01-28 10:21:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-28 10:21:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-28 10:21:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-28 10:21:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-28 10:21:52] 
[2026-01-28 10:21:52] 2026-01-27 23:20:47,115 | INFO     | **************************************
[2026-01-28 10:21:52] 2026-01-27 23:20:47,618 | INFO     | executing command: df -mP /home/michael/Boinc/BOINC/slots/0
[2026-01-28 10:21:52] 2026-01-27 23:20:47,632 | INFO     | sufficient remaining disk space (206234976256 B)
[2026-01-28 10:21:52] 2026-01-27 23:20:47,632 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-28 10:21:52] 2026-01-27 23:20:47,632 | INFO     | current server update state: UPDATING_FINAL
[2026-01-28 10:21:52] 2026-01-27 23:20:47,632 | INFO     | update_server=False
[2026-01-28 10:21:52] 2026-01-27 23:20:47,632 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-28 10:21:52] 2026-01-27 23:20:48,005 | INFO     | all job control threads have been joined
[2026-01-28 10:21:52] 2026-01-27 23:20:48,194 | INFO     | all payload control threads have been joined
[2026-01-28 10:21:52] 2026-01-27 23:20:48,577 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-28 10:21:52] 2026-01-27 23:20:48,578 | INFO     | aborting loop
[2026-01-28 10:21:52] 2026-01-27 23:20:48,637 | INFO     | [job] retrieve thread has finished
[2026-01-28 10:21:52] 2026-01-27 23:20:48,665 | INFO     | all data control threads have been joined
[2026-01-28 10:21:52] 2026-01-27 23:20:48,687 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-28 10:21:52] 2026-01-27 23:20:48,749 | INFO     | [data] copytool_in thread has finished
[2026-01-28 10:21:52] 2026-01-27 23:20:49,010 | INFO     | [job] control thread has finished
[2026-01-28 10:21:52] 2026-01-27 23:20:49,118 | INFO     | [payload] failed_post thread has finished
[2026-01-28 10:21:52] 2026-01-27 23:20:49,199 | INFO     | [payload] control thread has finished
[2026-01-28 10:21:52] 2026-01-27 23:20:49,574 | INFO     | [payload] execute_payloads thread has finished
[2026-01-28 10:21:52] 2026-01-27 23:20:49,582 | INFO     | [job] job monitor thread has finished
[2026-01-28 10:21:52] 2026-01-27 23:20:49,670 | INFO     | [data] control thread has finished
[2026-01-28 10:21:52] 2026-01-27 23:20:49,722 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-28 10:21:52] 2026-01-27 23:20:49,875 | INFO     | [job] validate thread has finished
[2026-01-28 10:21:52] 2026-01-27 23:20:50,026 | INFO     | [payload] validate_post thread has finished
[2026-01-28 10:21:52] 2026-01-27 23:20:50,026 | INFO     | [job] create_data_payload thread has finished
[2026-01-28 10:21:52] 2026-01-27 23:20:50,073 | INFO     | [payload] validate_pre thread has finished
[2026-01-28 10:21:52] 2026-01-27 23:20:50,632 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-28 10:21:52] 2026-01-27 23:20:50,692 | INFO     | [data] copytool_out thread has finished
[2026-01-28 10:21:52] 2026-01-27 23:20:51,638 | INFO     | [job] queue monitor thread has finished
[2026-01-28 10:21:52] 2026-01-27 23:20:53,725 | INFO     | [data] queue_monitor thread has finished
[2026-01-28 10:21:52] 2026-01-27 23:20:58,212 | INFO     | job.realtimelogging is not enabled
[2026-01-28 10:21:52] 2026-01-27 23:20:59,217 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-28 10:21:52] 2026-01-27 23:21:17,530 | INFO     | PID=22060 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-28 10:21:52] 2026-01-27 23:21:17,530 | INFO     | .. there are 4 such processes running
[2026-01-28 10:21:52] 2026-01-27 23:21:17,530 | INFO     | found 0 job(s) in 20 queues
[2026-01-28 10:21:52] 2026-01-27 23:21:17,530 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-28 10:21:52] 2026-01-27 23:21:17,530 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-28 10:21:52] 2026-01-27 23:21:44,921 | INFO     | [monitor] cgroup control has ended
[2026-01-28 10:21:52] 2026-01-27 23:21:46,870 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 133550185224000)>', '<ExcThread(monitor, started 133549684401920)>']
[2026-01-28 10:21:52] 2026-01-27 23:21:47,673 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-28 10:21:52] 2026-01-27 23:21:47,674 | INFO     | [monitor] control thread has ended
[2026-01-28 10:21:52] 2026-01-27 23:21:51,895 | INFO     | all workflow threads have been joined
[2026-01-28 10:21:52] 2026-01-27 23:21:51,896 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-28 10:21:52] 2026-01-27 23:21:51,896 | INFO     | traces error code: 0
[2026-01-28 10:21:52] 2026-01-27 23:21:51,896 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-28 10:21:52] 2026-01-27 23:21:51,984 [wrapper] ==== pilot stdout END ====
[2026-01-28 10:21:52] 2026-01-27 23:21:51,987 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-28 10:21:52] 2026-01-27 23:21:51,989 [wrapper] pilotpid: 22060
[2026-01-28 10:21:52] 2026-01-27 23:21:51,991 [wrapper] Pilot exit status: 0
[2026-01-28 10:21:52] 2026-01-27 23:21:52,000 [wrapper] pandaids: 6983015874 6983015874
[2026-01-28 10:21:52] 2026-01-27 23:21:52,041 [wrapper] cleanup supervisor_pilot   61348 22061
[2026-01-28 10:21:52] 2026-01-27 23:21:52,043 [wrapper] Test setup, not cleaning
[2026-01-28 10:21:52] 2026-01-27 23:21:52,045 [wrapper] apfmon messages muted
[2026-01-28 10:21:52] 2026-01-27 23:21:52,047 [wrapper] ==== wrapper stdout END ====
[2026-01-28 10:21:52] 2026-01-27 23:21:52,049 [wrapper] ==== wrapper stderr END ====
[2026-01-28 10:21:52]  *** Error codes and diagnostics ***
[2026-01-28 10:21:52]     "exeErrorCode": 0,
[2026-01-28 10:21:52]     "exeErrorDiag": "",
[2026-01-28 10:21:52]     "pilotErrorCode": 0,
[2026-01-28 10:21:52]     "pilotErrorDiag": "",
[2026-01-28 10:21:52]  *** Listing of results directory ***
[2026-01-28 10:21:52] total 1147220
[2026-01-28 10:21:52] drwx------ 5 michael michael      4096 Jan 14 21:00 pilot3
[2026-01-28 10:21:52] -rw-r--r-- 1 michael michael    584422 Jan 26 01:11 pilot3.tar.gz
[2026-01-28 10:21:52] -rw-r--r-- 1 michael michael      5111 Jan 26 01:11 queuedata.json
[2026-01-28 10:21:52] -rwx------ 1 michael michael     36322 Jan 26 01:12 runpilot2-wrapper.sh
[2026-01-28 10:21:52] -rw-rw-r-- 1 michael michael       100 Jan 28 07:27 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-28 10:21:52] -rwxr-xr-x 1 michael michael      7986 Jan 28 07:27 run_atlas
[2026-01-28 10:21:52] -rw-rw-r-- 1 michael michael       105 Jan 28 07:27 job.xml
[2026-01-28 10:21:52] -rw-r--r-- 3 michael michael 493648381 Jan 28 07:27 EVNT.48317929._000023.pool.root.1
[2026-01-28 10:21:52] -rw-r--r-- 3 michael michael 493648381 Jan 28 07:27 ATLAS.root_0
[2026-01-28 10:21:52] drwxrwx--x 2 michael michael      4096 Jan 28 07:27 shared
[2026-01-28 10:21:52] -rw-r--r-- 2 michael michael    597760 Jan 28 07:27 input.tar.gz
[2026-01-28 10:21:52] -rw-r--r-- 2 michael michael     15845 Jan 28 07:27 start_atlas.sh
[2026-01-28 10:21:52] -rw-rw-r-- 1 michael michael         0 Jan 28 07:27 boinc_lockfile
[2026-01-28 10:21:52] -rw------- 1 michael michael   1516246 Jan 28 07:27 agis_ddmendpoints.agis.ALL.json
[2026-01-28 10:21:52] -rw-rw-r-- 1 michael michael      2508 Jan 28 08:34 pandaJob.out
[2026-01-28 10:21:52] -rw------- 1 michael michael        50 Jan 28 08:34 setup.sh.local
[2026-01-28 10:21:52] -rw------- 1 michael michael   1005253 Jan 28 08:34 agis_schedconf.cvmfs.json
[2026-01-28 10:21:52] -rw------- 1 michael michael       417 Jan 28 08:34 workernode_map.json
[2026-01-28 10:21:52] -rw-rw-r-- 1 michael michael      9830 Jan 28 08:35 init_data.xml
[2026-01-28 10:21:52] -rw------- 1 michael michael 180976609 Jan 28 10:20 HITS.48317931._001151.pool.root.1
[2026-01-28 10:21:52] -rw-rw-r-- 1 michael michael       531 Jan 28 10:20 boinc_task_state.xml
[2026-01-28 10:21:52] -rw------- 1 michael michael        96 Jan 28 10:20 pilot_heartbeat.json
[2026-01-28 10:21:52] -rw------- 1 michael michael      1029 Jan 28 10:20 memory_monitor_summary.json
[2026-01-28 10:21:52] -rw------- 1 michael michael    321142 Jan 28 10:20 log.48317931._001151.job.log.tgz.1
[2026-01-28 10:21:52] -rw------- 1 michael michael      6292 Jan 28 10:20 heartbeat.json
[2026-01-28 10:21:52] -rw-rw-r-- 1 michael michael        28 Jan 28 10:21 wrapper_checkpoint.txt
[2026-01-28 10:21:52] -rw-rw-r-- 1 michael michael      8192 Jan 28 10:21 boinc_mmap_file
[2026-01-28 10:21:52] -rw------- 1 michael michael      4901 Jan 28 10:21 pilotlog.txt
[2026-01-28 10:21:52] -rw------- 1 michael michael    941246 Jan 28 10:21 log.48317931._001151.job.log.1
[2026-01-28 10:21:52] -rw------- 1 michael michael       357 Jan 28 10:21 output.list
[2026-01-28 10:21:52] -rw-rw-r-- 1 michael michael       620 Jan 28 10:21 runtime_log
[2026-01-28 10:21:52] -rw------- 1 michael michael   1280000 Jan 28 10:21 result.tar.gz
[2026-01-28 10:21:52] -rw------- 1 michael michael       771 Jan 28 10:21 vPKNDm91F48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmMj7KDm5SA19n.diag
[2026-01-28 10:21:52] -rw-rw-r-- 1 michael michael      9521 Jan 28 10:21 runtime_log.err
[2026-01-28 10:21:52] -rw-rw-r-- 1 michael michael     22492 Jan 28 10:21 stderr.txt
[2026-01-28 10:21:52] HITS file was successfully produced:
[2026-01-28 10:21:52] -rw------- 1 michael michael 180976609 Jan 28 10:20 shared/HITS.pool.root.1
[2026-01-28 10:21:52]  *** Contents of shared directory: ***
[2026-01-28 10:21:52] total 660676
[2026-01-28 10:21:52] -rw-r--r-- 3 michael michael 493648381 Jan 28 07:27 ATLAS.root_0
[2026-01-28 10:21:52] -rw-r--r-- 2 michael michael    597760 Jan 28 07:27 input.tar.gz
[2026-01-28 10:21:52] -rw-r--r-- 2 michael michael     15845 Jan 28 07:27 start_atlas.sh
[2026-01-28 10:21:52] -rw------- 1 michael michael 180976609 Jan 28 10:20 HITS.pool.root.1
[2026-01-28 10:21:52] -rw------- 1 michael michael   1280000 Jan 28 10:21 result.tar.gz
10:21:53 (5179): run_atlas exited; CPU time 24354.971775
10:21:53 (5179): called boinc_finish(0)

</stderr_txt>
]]>

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