Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:06:35 (7382): wrapper (7.7.26015): starting
10:06:35 (7382): wrapper: running run_atlas (--nthreads 8)
[2026-01-27 10:06:35] Arguments: --nthreads 8
[2026-01-27 10:06:35] Threads: 8
[2026-01-27 10:06:35] Checking for CVMFS
[2026-01-27 10:06:35] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-27 10:06:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-27 10:06:35] Running cvmfs_config stat atlas.cern.ch
[2026-01-27 10:06:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-27 10:06:36] 2.11.2.0 26122 61133 128984 155578 3 118 18183364 25165824 94 130560 0 21076788 99.796 17521599 2998 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-27 10:06:36] CVMFS is ok
[2026-01-27 10:06:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-27 10:06:36] Checking for apptainer binary...
[2026-01-27 10:06:36] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-27 10:06:36] Running /usr/bin/apptainer --version
[2026-01-27 10:06:36] apptainer version 1.3.2-1.el7
[2026-01-27 10:06:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-27 10:06:37] cg-vwn399.simple-grid.lan
[2026-01-27 10:06:37] apptainer works
[2026-01-27 10:06:37] Set ATHENA_PROC_NUMBER=8
[2026-01-27 10:06:37] Set ATHENA_CORE_NUMBER=8
[2026-01-27 10:06:37] Starting ATLAS job with PandaID=6983771623
[2026-01-27 10:06:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 13:36:35]  *** The last 200 lines of the pilot log: ***
[2026-01-27 13:36:35] 2026-01-27 12:35:47,274 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-6983771623/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 13:36:35] 2026-01-27 12:35:47,275 | INFO     | extracted standard info from prmon json
[2026-01-27 13:36:35] 2026-01-27 12:35:47,275 | INFO     | extracted standard memory fields from prmon json
[2026-01-27 13:36:35] 2026-01-27 12:35:47,275 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-27 13:36:35] 2026-01-27 12:35:47,276 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-27 13:36:35] 2026-01-27 12:35:47,276 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-27 13:36:35] 2026-01-27 12:35:47,281 | INFO     | fitting pss+swap vs Time
[2026-01-27 13:36:35] 2026-01-27 12:35:47,281 | INFO     | sum of square deviations: 2671343110.0
[2026-01-27 13:36:35] 2026-01-27 12:35:47,283 | INFO     | sum of deviations: 23209464037.000008
[2026-01-27 13:36:35] 2026-01-27 12:35:47,283 | INFO     | mean x: 1769511062.0
[2026-01-27 13:36:35] 2026-01-27 12:35:47,283 | INFO     | mean y: 2464064.112195122
[2026-01-27 13:36:35] 2026-01-27 12:35:47,283 | INFO     | intersect: -15371601215.1932
[2026-01-27 13:36:35] 2026-01-27 12:35:47,284 | INFO     | chi2: 2.2318391395930623
[2026-01-27 13:36:35] 2026-01-27 12:35:47,284 | INFO     | sum of square deviations: 2480604650.0
[2026-01-27 13:36:35] 2026-01-27 12:35:47,286 | INFO     | sum of deviations: 36333691141.0
[2026-01-27 13:36:35] 2026-01-27 12:35:47,286 | INFO     | mean x: 1769510909.5
[2026-01-27 13:36:35] 2026-01-27 12:35:47,286 | INFO     | mean y: 2474337.72
[2026-01-27 13:36:35] 2026-01-27 12:35:47,286 | INFO     | intersect: -25915748002.30625
[2026-01-27 13:36:35] 2026-01-27 12:35:47,287 | INFO     | chi2: 1.4172927987500508
[2026-01-27 13:36:35] 2026-01-27 12:35:47,287 | INFO     | current chi2=1.4172927987500508 (change=36.49664200223364 %)
[2026-01-27 13:36:35] 2026-01-27 12:35:47,287 | INFO     | sum of square deviations: 2299168690.0
[2026-01-27 13:36:35] 2026-01-27 12:35:47,293 | INFO     | sum of deviations: 35328860101.0
[2026-01-27 13:36:35] 2026-01-27 12:35:47,293 | INFO     | mean x: 1769510757.0
[2026-01-27 13:36:35] 2026-01-27 12:35:47,294 | INFO     | mean y: 2473492.969230769
[2026-01-27 13:36:35] 2026-01-27 12:35:47,294 | INFO     | intersect: -27187701048.45061
[2026-01-27 13:36:35] 2026-01-27 12:35:47,294 | INFO     | chi2: 1.4176785044891362
[2026-01-27 13:36:35] 2026-01-27 12:35:47,294 | INFO     | current chi2=1.4176785044891362 (change=-0.027214259426537542 %)
[2026-01-27 13:36:35] 2026-01-27 12:35:47,294 | INFO     | right removable region: 194
[2026-01-27 13:36:35] 2026-01-27 12:35:47,295 | INFO     | sum of square deviations: 2480604650.0
[2026-01-27 13:36:35] 2026-01-27 12:35:47,296 | INFO     | sum of deviations: -6631336809.499999
[2026-01-27 13:36:35] 2026-01-27 12:35:47,297 | INFO     | mean x: 1769511214.5
[2026-01-27 13:36:35] 2026-01-27 12:35:47,297 | INFO     | mean y: 2487639.745
[2026-01-27 13:36:35] 2026-01-27 12:35:47,297 | INFO     | intersect: 4732876600.169185
[2026-01-27 13:36:35] 2026-01-27 12:35:47,297 | INFO     | chi2: 0.8399351324581673
[2026-01-27 13:36:35] 2026-01-27 12:35:47,298 | INFO     | current chi2=0.8399351324581673 (change=62.36578534905903 %)
[2026-01-27 13:36:35] 2026-01-27 12:35:47,298 | INFO     | sum of square deviations: 2299168690.0
[2026-01-27 13:36:35] 2026-01-27 12:35:47,300 | INFO     | sum of deviations: -8769271916.0
[2026-01-27 13:36:35] 2026-01-27 12:35:47,300 | INFO     | mean x: 1769511367.0
[2026-01-27 13:36:35] 2026-01-27 12:35:47,300 | INFO     | mean y: 2489435.969230769
[2026-01-27 13:36:35] 2026-01-27 12:35:47,300 | INFO     | intersect: 6751592450.100773
[2026-01-27 13:36:35] 2026-01-27 12:35:47,300 | INFO     | chi2: 0.8362407514040274
[2026-01-27 13:36:35] 2026-01-27 12:35:47,301 | INFO     | current chi2=0.8362407514040274 (change=0.43984123432578065 %)
[2026-01-27 13:36:35] 2026-01-27 12:35:47,301 | INFO     | left removable region: 20
[2026-01-27 13:36:35] 2026-01-27 12:35:47,301 | INFO     | sum of square deviations: 1633472487.5
[2026-01-27 13:36:35] 2026-01-27 12:35:47,302 | INFO     | sum of deviations: 2136718400.4999993
[2026-01-27 13:36:35] 2026-01-27 12:35:47,303 | INFO     | mean x: 1769511336.5
[2026-01-27 13:36:35] 2026-01-27 12:35:47,303 | INFO     | mean y: 2502869.2816091953
[2026-01-27 13:36:35] 2026-01-27 12:35:47,303 | INFO     | intersect: -2312165704.2794724
[2026-01-27 13:36:35] 2026-01-27 12:35:47,303 | INFO     | chi2: 0.00011017140385074018
[2026-01-27 13:36:35] 2026-01-27 12:35:47,303 | INFO     | current memory leak: 1.31 B/s (using 174 data points, chi2=0.00)
[2026-01-27 13:36:35] 2026-01-27 12:35:47,304 | INFO     | could have reported an average CPU frequency of 1999 MHz (10 samples)
[2026-01-27 13:36:35] 2026-01-27 12:35:47,304 | INFO     | ..............................
[2026-01-27 13:36:35] 2026-01-27 12:35:47,304 | INFO     | . Timing measurements:
[2026-01-27 13:36:35] 2026-01-27 12:35:47,305 | INFO     | . get job = 0 s
[2026-01-27 13:36:35] 2026-01-27 12:35:47,305 | INFO     | . initial setup = 8 s
[2026-01-27 13:36:35] 2026-01-27 12:35:47,305 | INFO     | . payload setup = 8 s
[2026-01-27 13:36:35] 2026-01-27 12:35:47,305 | INFO     | . stage-in = 0 s
[2026-01-27 13:36:35] 2026-01-27 12:35:47,305 | INFO     | . payload execution = 12502 s
[2026-01-27 13:36:35] 2026-01-27 12:35:47,305 | INFO     | . stage-out = 4 s
[2026-01-27 13:36:35] 2026-01-27 12:35:47,305 | INFO     | . log creation = 1 s
[2026-01-27 13:36:35] 2026-01-27 12:35:47,305 | INFO     | ..............................
[2026-01-27 13:36:35] 2026-01-27 12:35:47,453 | INFO     | time since job start (12525s) is within the limit (349056.0s)
[2026-01-27 13:36:35] 2026-01-27 12:35:47,692 | INFO     | 
[2026-01-27 13:36:35] 2026-01-27 12:35:47,692 | INFO     | job summary report
[2026-01-27 13:36:35] 2026-01-27 12:35:47,693 | INFO     | --------------------------------------------------
[2026-01-27 13:36:35] 2026-01-27 12:35:47,693 | INFO     | PanDA job id: 6983771623
[2026-01-27 13:36:35] 2026-01-27 12:35:47,693 | INFO     | task id: 48317872
[2026-01-27 13:36:35] 2026-01-27 12:35:47,693 | INFO     | errors: (none)
[2026-01-27 13:36:35] 2026-01-27 12:35:47,693 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-27 13:36:35] 2026-01-27 12:35:47,693 | INFO     | pilot state: finished 
[2026-01-27 13:36:35] 2026-01-27 12:35:47,693 | INFO     | transexitcode: 0
[2026-01-27 13:36:35] 2026-01-27 12:35:47,693 | INFO     | exeerrorcode: 0
[2026-01-27 13:36:35] 2026-01-27 12:35:47,693 | INFO     | exeerrordiag: 
[2026-01-27 13:36:35] 2026-01-27 12:35:47,694 | INFO     | exitcode: 0
[2026-01-27 13:36:35] 2026-01-27 12:35:47,694 | INFO     | exitmsg: OK
[2026-01-27 13:36:35] 2026-01-27 12:35:47,694 | INFO     | cpuconsumptiontime: 57718 s
[2026-01-27 13:36:35] 2026-01-27 12:35:47,694 | INFO     | nevents: 400
[2026-01-27 13:36:35] 2026-01-27 12:35:47,694 | INFO     | neventsw: 0
[2026-01-27 13:36:35] 2026-01-27 12:35:47,694 | INFO     | pid: 15840
[2026-01-27 13:36:35] 2026-01-27 12:35:47,694 | INFO     | pgrp: 15840
[2026-01-27 13:36:35] 2026-01-27 12:35:47,694 | INFO     | corecount: 8
[2026-01-27 13:36:35] 2026-01-27 12:35:47,694 | INFO     | event service: False
[2026-01-27 13:36:35] 2026-01-27 12:35:47,695 | INFO     | sizes: {0: 2283799, 1: 2284260, 2: 2284260, 12515: 2314080, 12520: 2323078, 12521: 2323134, 12523: 2323456}
[2026-01-27 13:36:35] 2026-01-27 12:35:47,695 | INFO     | --------------------------------------------------
[2026-01-27 13:36:35] 2026-01-27 12:35:47,695 | INFO     | 
[2026-01-27 13:36:35] 2026-01-27 12:35:47,695 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2026-01-27 13:36:35] 2026-01-27 12:35:48,168 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-27 13:36:35] 2026-01-27 12:35:48,169 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-27 13:36:35] 2026-01-27 12:35:48,169 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-27 13:36:35] 2026-01-27 12:35:48,169 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-27 13:36:35] 2026-01-27 12:35:48,169 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-27 13:36:35] 2026-01-27 12:35:48,169 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-27 13:36:35] 2026-01-27 12:35:48,169 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-27 13:36:35] 2026-01-27 12:35:48,169 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-27 13:36:35] 2026-01-27 12:35:48,170 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-27 13:36:35] 2026-01-27 12:35:48,170 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-27 13:36:35] 2026-01-27 12:35:48,170 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-27 13:36:35] 2026-01-27 12:35:48,170 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-27 13:36:35] 2026-01-27 12:35:48,170 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-27 13:36:35] 2026-01-27 12:35:48,170 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-27 13:36:35] 2026-01-27 12:35:48,170 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-27 13:36:35] 2026-01-27 12:35:48,170 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-27 13:36:35] 2026-01-27 12:35:48,171 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-27 13:36:35] 2026-01-27 12:35:48,171 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-27 13:36:35] 2026-01-27 12:35:48,171 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-27 13:36:35] 2026-01-27 12:35:48,171 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-27 13:36:35] 2026-01-27 12:35:48,171 | INFO     | job 6983771623 has completed (purged errors)
[2026-01-27 13:36:35] 2026-01-27 12:35:48,171 | INFO     | overall cleanup function is called
[2026-01-27 13:36:35] 2026-01-27 12:35:49,180 | INFO     | --- collectZombieJob: --- 10, [15840]
[2026-01-27 13:36:35] 2026-01-27 12:35:49,180 | INFO     | zombie collector waiting for pid 15840
[2026-01-27 13:36:35] 2026-01-27 12:35:49,181 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 13:36:35] 2026-01-27 12:35:49,181 | INFO     | collected zombie processes
[2026-01-27 13:36:35] 2026-01-27 12:35:49,181 | INFO     | will attempt to kill all subprocesses of pid=15840
[2026-01-27 13:36:35] 2026-01-27 12:35:49,329 | INFO     | process IDs to be killed: [15840] (in reverse order)
[2026-01-27 13:36:35] 2026-01-27 12:35:50,391 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 13:36:35] 2026-01-27 12:35:50,393 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 13:36:35] 2026-01-27 12:35:50,395 | INFO     | did not find any defunct processes belonging to 15840
[2026-01-27 13:36:35] 2026-01-27 12:35:50,397 | INFO     | did not find any defunct processes belonging to 15840
[2026-01-27 13:36:35] 2026-01-27 12:35:50,398 | INFO     | ready for new job
[2026-01-27 13:36:35] 2026-01-27 12:35:50,398 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 13:36:35] 2026-01-27 12:35:50,400 | INFO     | **************************************
[2026-01-27 13:36:35] 2026-01-27 12:35:50,401 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 13:36:35] 2026-01-27 12:35:50,401 | INFO     | **************************************
[2026-01-27 13:36:35] 2026-01-27 12:35:50,401 | INFO     | 
[2026-01-27 13:36:35] 2026-01-27 12:35:50,402 | INFO     | pilot is running in a VM
[2026-01-27 13:36:35] 2026-01-27 12:35:50,402 | INFO     | architecture information:
[2026-01-27 13:36:35] 2026-01-27 12:35:50,417 | INFO     | executing command: cat /etc/os-release
[2026-01-27 13:36:35] 2026-01-27 12:35:50,755 | INFO     | cat /etc/os-release:
[2026-01-27 13:36:35] NAME="CentOS Linux"
[2026-01-27 13:36:35] VERSION="7 (Core)"
[2026-01-27 13:36:35] ID="centos"
[2026-01-27 13:36:35] ID_LIKE="rhel fedora"
[2026-01-27 13:36:35] VERSION_ID="7"
[2026-01-27 13:36:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 13:36:35] ANSI_COLOR="0;31"
[2026-01-27 13:36:35] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 13:36:35] HOME_URL="https://www.centos.org/"
[2026-01-27 13:36:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 13:36:35] 
[2026-01-27 13:36:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 13:36:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 13:36:35] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 13:36:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 13:36:35] 
[2026-01-27 13:36:35] 2026-01-27 12:35:50,755 | INFO     | **************************************
[2026-01-27 13:36:35] 2026-01-27 12:35:51,258 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2026-01-27 13:36:35] 2026-01-27 12:35:51,482 | INFO     | sufficient remaining disk space (495932407808 B)
[2026-01-27 13:36:35] 2026-01-27 12:35:51,482 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 13:36:35] 2026-01-27 12:35:51,483 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 13:36:35] 2026-01-27 12:35:51,483 | INFO     | update_server=False
[2026-01-27 13:36:35] 2026-01-27 12:35:51,483 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 13:36:35] 2026-01-27 12:35:51,493 | INFO     | all data control threads have been joined
[2026-01-27 13:36:35] 2026-01-27 12:35:51,749 | INFO     | all job control threads have been joined
[2026-01-27 13:36:35] 2026-01-27 12:35:51,917 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 13:36:35] 2026-01-27 12:35:51,930 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-27 13:36:35] 2026-01-27 12:35:51,930 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-27 13:36:35] 2026-01-27 12:35:51,931 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 13:36:35] 2026-01-27 12:35:51,931 | INFO     | will abort loop
[2026-01-27 13:36:35] 2026-01-27 12:35:52,357 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 13:36:35] 2026-01-27 12:35:52,470 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 13:36:35] 2026-01-27 12:35:52,489 | INFO     | [job] retrieve thread has finished
[2026-01-27 13:36:35] 2026-01-27 12:35:52,499 | INFO     | [data] control thread has finished
[2026-01-27 13:36:35] 2026-01-27 12:35:52,611 | INFO     | all payload control threads have been joined
[2026-01-27 13:36:35] 2026-01-27 12:35:52,755 | INFO     | [job] control thread has finished
[2026-01-27 13:36:35] 2026-01-27 12:35:52,936 | INFO     | [job] job monitor thread has finished
[2026-01-27 13:36:35] 2026-01-27 12:35:53,015 | INFO     | [payload] failed_post thread has finished
[2026-01-27 13:36:35] 2026-01-27 12:35:53,476 | INFO     | [job] queue monitor thread has finished
[2026-01-27 13:36:35] 2026-01-27 12:35:53,587 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 13:36:35] 2026-01-27 12:35:53,617 | INFO     | [payload] control thread has finished
[2026-01-27 13:36:35] 2026-01-27 12:35:53,623 | INFO     | [payload] validate_post thread has finished
[2026-01-27 13:36:35] 2026-01-27 12:35:53,836 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 13:36:35] 2026-01-27 12:35:53,837 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 13:36:35] 2026-01-27 12:35:53,842 | INFO     | [data] copytool_in thread has finished
[2026-01-27 13:36:35] 2026-01-27 12:35:53,901 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 13:36:35] 2026-01-27 12:35:53,938 | INFO     | [job] validate thread has finished
[2026-01-27 13:36:35] 2026-01-27 12:35:54,364 | INFO     | [data] copytool_out thread has finished
[2026-01-27 13:36:35] 2026-01-27 12:35:55,925 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 13:36:35] 2026-01-27 12:36:20,595 | INFO     | PID=11428 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-27 13:36:35] 2026-01-27 12:36:20,595 | INFO     | .. there are 2 such processes running
[2026-01-27 13:36:35] 2026-01-27 12:36:20,596 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 13:36:35] 2026-01-27 12:36:20,596 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 13:36:35] 2026-01-27 12:36:20,596 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 13:36:35] 2026-01-27 12:36:23,541 | INFO     | [monitor] cgroup control has ended
[2026-01-27 13:36:35] 2026-01-27 12:36:25,031 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140511173670720)>', '<ExcThread(monitor, started 140510383564544)>']
[2026-01-27 13:36:35] 2026-01-27 12:36:25,626 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 13:36:35] 2026-01-27 12:36:25,626 | INFO     | [monitor] control thread has ended
[2026-01-27 13:36:35] 2026-01-27 12:36:30,057 | INFO     | all workflow threads have been joined
[2026-01-27 13:36:35] 2026-01-27 12:36:30,057 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 13:36:35] 2026-01-27 12:36:30,058 | INFO     | traces error code: 0
[2026-01-27 13:36:35] 2026-01-27 12:36:30,058 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 13:36:35] 2026-01-27 12:36:30,560 [wrapper] ==== pilot stdout END ====
[2026-01-27 13:36:35] 2026-01-27 12:36:30,667 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 13:36:35] 2026-01-27 12:36:30,745 [wrapper] pilotpid: 11428
[2026-01-27 13:36:35] 2026-01-27 12:36:30,852 [wrapper] Pilot exit status: 0
[2026-01-27 13:36:35] 2026-01-27 12:36:31,297 [wrapper] pandaids: 6983771623
[2026-01-27 13:36:35] 2026-01-27 12:36:32,149 [wrapper] cleanup supervisor_pilot  9095 11429
[2026-01-27 13:36:35] 2026-01-27 12:36:32,183 [wrapper] Test setup, not cleaning
[2026-01-27 13:36:35] 2026-01-27 12:36:32,285 [wrapper] apfmon messages muted
[2026-01-27 13:36:35] 2026-01-27 12:36:32,409 [wrapper] ==== wrapper stdout END ====
[2026-01-27 13:36:35] 2026-01-27 12:36:32,483 [wrapper] ==== wrapper stderr END ====
[2026-01-27 13:36:35]  *** Error codes and diagnostics ***
[2026-01-27 13:36:35]     "exeErrorCode": 0,
[2026-01-27 13:36:35]     "exeErrorDiag": "",
[2026-01-27 13:36:35]     "pilotErrorCode": 0,
[2026-01-27 13:36:35]     "pilotErrorDiag": "",
[2026-01-27 13:36:35]  *** Listing of results directory ***
[2026-01-27 13:36:35] total 676076
[2026-01-27 13:36:35] -rw-r--r--. 1 boinc boinc      5111 Jan 26 02:12 queuedata.json
[2026-01-27 13:36:35] -rw-r--r--. 1 boinc boinc    584422 Jan 26 02:12 pilot3.tar.gz
[2026-01-27 13:36:35] -rwx------. 1 boinc boinc     36322 Jan 26 02:12 runpilot2-wrapper.sh
[2026-01-27 13:36:35] -rw-r--r--. 1 boinc boinc       100 Jan 27 10:06 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 13:36:35] -rwxr-xr-x. 1 boinc boinc      7986 Jan 27 10:06 run_atlas
[2026-01-27 13:36:35] -rw-r--r--. 1 boinc boinc       105 Jan 27 10:06 job.xml
[2026-01-27 13:36:35] -rw-r--r--. 1 boinc boinc      6392 Jan 27 10:06 init_data.xml
[2026-01-27 13:36:35] -rw-r--r--. 2 boinc boinc 500453792 Jan 27 10:06 EVNT.48317869._000031.pool.root.1
[2026-01-27 13:36:35] -rw-r--r--. 2 boinc boinc     15845 Jan 27 10:06 start_atlas.sh
[2026-01-27 13:36:35] drwxrwx--x. 2 boinc boinc        68 Jan 27 10:06 shared
[2026-01-27 13:36:35] -rw-r--r--. 2 boinc boinc    597752 Jan 27 10:06 input.tar.gz
[2026-01-27 13:36:35] -rw-r--r--. 1 boinc boinc         0 Jan 27 10:06 boinc_lockfile
[2026-01-27 13:36:35] -rw-r--r--. 1 boinc boinc      2514 Jan 27 10:06 pandaJob.out
[2026-01-27 13:36:35] -rw-------. 1 boinc boinc   1003573 Jan 27 10:06 agis_schedconf.cvmfs.json
[2026-01-27 13:36:35] -rw-------. 1 boinc boinc       415 Jan 27 10:07 workernode_map.json
[2026-01-27 13:36:35] drwx------. 5 boinc boinc      4096 Jan 27 10:07 pilot3
[2026-01-27 13:36:35] -rw-------. 1 boinc boinc 183451772 Jan 27 13:34 HITS.48317872._001546.pool.root.1
[2026-01-27 13:36:35] -rw-r--r--. 1 boinc boinc       531 Jan 27 13:34 boinc_task_state.xml
[2026-01-27 13:36:35] -rw-------. 1 boinc boinc      1017 Jan 27 13:35 memory_monitor_summary.json
[2026-01-27 13:36:35] -rw-------. 1 boinc boinc   1516246 Jan 27 13:35 agis_ddmendpoints.agis.ALL.json
[2026-01-27 13:36:35] -rw-------. 1 boinc boinc    464548 Jan 27 13:35 log.48317872._001546.job.log.tgz.1
[2026-01-27 13:36:35] -rw-------. 1 boinc boinc      6312 Jan 27 13:35 heartbeat.json
[2026-01-27 13:36:35] -rw-r--r--. 1 boinc boinc        28 Jan 27 13:36 wrapper_checkpoint.txt
[2026-01-27 13:36:35] -rw-r--r--. 1 boinc boinc      8192 Jan 27 13:36 boinc_mmap_file
[2026-01-27 13:36:35] -rw-------. 1 boinc boinc        95 Jan 27 13:36 pilot_heartbeat.json
[2026-01-27 13:36:35] -rw-------. 1 boinc boinc      5066 Jan 27 13:36 pilotlog.txt
[2026-01-27 13:36:35] -rw-------. 1 boinc boinc   1768045 Jan 27 13:36 log.48317872._001546.job.log.1
[2026-01-27 13:36:35] -rw-------. 1 boinc boinc       357 Jan 27 13:36 output.list
[2026-01-27 13:36:35] -rw-r--r--. 1 boinc boinc       620 Jan 27 13:36 runtime_log
[2026-01-27 13:36:35] -rw-------. 1 boinc boinc   2252800 Jan 27 13:36 result.tar.gz
[2026-01-27 13:36:35] -rw-r--r--. 1 boinc boinc      8816 Jan 27 13:36 runtime_log.err
[2026-01-27 13:36:35] -rw-------. 1 boinc boinc       654 Jan 27 13:36 p76MDmTKQ48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmqh8KDmlOwJxn.diag
[2026-01-27 13:36:35] -rw-r--r--. 1 boinc boinc     20709 Jan 27 13:36 stderr.txt
[2026-01-27 13:36:35] HITS file was successfully produced:
[2026-01-27 13:36:35] -rw-------. 1 boinc boinc 183451772 Jan 27 13:34 shared/HITS.pool.root.1
[2026-01-27 13:36:35]  *** Contents of shared directory: ***
[2026-01-27 13:36:35] total 670684
[2026-01-27 13:36:35] -rw-r--r--. 2 boinc boinc 500453792 Jan 27 10:06 ATLAS.root_0
[2026-01-27 13:36:35] -rw-r--r--. 2 boinc boinc     15845 Jan 27 10:06 start_atlas.sh
[2026-01-27 13:36:35] -rw-r--r--. 2 boinc boinc    597752 Jan 27 10:06 input.tar.gz
[2026-01-27 13:36:35] -rw-------. 1 boinc boinc 183451772 Jan 27 13:34 HITS.pool.root.1
[2026-01-27 13:36:35] -rw-------. 1 boinc boinc   2252800 Jan 27 13:36 result.tar.gz
13:36:36 (7382): run_atlas exited; CPU time 57834.933291
13:36:36 (7382): called boinc_finish(0)

</stderr_txt>
]]>

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