Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:09:25 (22648): wrapper (7.7.26015): starting
20:09:25 (22648): wrapper: running run_atlas (--nthreads 8)
[2026-01-26 20:09:25] Arguments: --nthreads 8
[2026-01-26 20:09:25] Threads: 8
[2026-01-26 20:09:25] Checking for CVMFS
[2026-01-26 20:09:25] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 20:09:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 20:09:25] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 20:09:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 20:09:26] 2.11.2.0 2840 156236 83556 155567 1 50 16135956 20275201 1 130560 0 39633918 99.798 11528688 28769 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-26 20:09:26] CVMFS is ok
[2026-01-26 20:09:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 20:09:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 20:09:26] Further information can be found at the LHC@home message board.
[2026-01-26 20:09:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 20:09:26] Checking for apptainer binary...
[2026-01-26 20:09:26] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 20:09:26] Running /usr/bin/apptainer --version
[2026-01-26 20:09:26] apptainer version 1.3.2-1.el7
[2026-01-26 20:09:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 20:09:27] c-204-39.aglt2.org
[2026-01-26 20:09:27] apptainer works
[2026-01-26 20:09:27] Set ATHENA_PROC_NUMBER=8
[2026-01-26 20:09:27] Set ATHENA_CORE_NUMBER=8
[2026-01-26 20:09:27] Starting ATLAS job with PandaID=6983458279
[2026-01-26 20:09:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
20:30:00 (9081): wrapper (7.7.26015): starting
20:30:00 (9081): wrapper: running run_atlas (--nthreads 8)
[2026-01-26 20:30:00] Arguments: --nthreads 8
[2026-01-26 20:30:00] Threads: 8
[2026-01-26 20:30:00] This job has been restarted, cleaning up previous attempt
[2026-01-26 20:30:00] Checking for CVMFS
[2026-01-26 20:30:00] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 20:30:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 20:30:00] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 20:30:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 20:30:00] 2.11.2.0 2840 156257 84408 155568 0 11 16177839 20275201 1 130560 0 39684108 99.798 11532608 28769 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-26 20:30:00] CVMFS is ok
[2026-01-26 20:30:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 20:30:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 20:30:00] Further information can be found at the LHC@home message board.
[2026-01-26 20:30:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 20:30:00] Checking for apptainer binary...
[2026-01-26 20:30:00] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 20:30:00] Running /usr/bin/apptainer --version
[2026-01-26 20:30:00] apptainer version 1.3.2-1.el7
[2026-01-26 20:30:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 20:30:02] c-204-39.aglt2.org
[2026-01-26 20:30:02] apptainer works
[2026-01-26 20:30:02] Set ATHENA_PROC_NUMBER=8
[2026-01-26 20:30:02] Set ATHENA_CORE_NUMBER=8
[2026-01-26 20:30:02] Starting ATLAS job with PandaID=6983458279
[2026-01-26 20:30:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 01:21:53]  *** The last 200 lines of the pilot log: ***
[2026-01-27 01:21:53] 2026-01-27 06:20:46,953 | INFO     | total number of processed events: 400 (read)
[2026-01-27 01:21:53] 2026-01-27 06:20:46,956 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6983458279/memory_monitor_summary.json (trf name=prmon)
[2026-01-27 01:21:53] 2026-01-27 06:20:46,956 | INFO     | extracted standard info from prmon json
[2026-01-27 01:21:53] 2026-01-27 06:20:46,956 | INFO     | extracted standard memory fields from prmon json
[2026-01-27 01:21:53] 2026-01-27 06:20:46,956 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-27 01:21:53] 2026-01-27 06:20:46,957 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-27 01:21:53] 2026-01-27 06:20:46,957 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-27 01:21:53] 2026-01-27 06:20:46,961 | INFO     | fitting pss+swap vs Time
[2026-01-27 01:21:53] 2026-01-27 06:20:46,962 | INFO     | sum of square deviations: 7253894147.5
[2026-01-27 01:21:53] 2026-01-27 06:20:46,964 | INFO     | sum of deviations: -36293323293.0
[2026-01-27 01:21:53] 2026-01-27 06:20:46,964 | INFO     | mean x: 1769486137.5
[2026-01-27 01:21:53] 2026-01-27 06:20:46,964 | INFO     | mean y: 2517417.6363636362
[2026-01-27 01:21:53] 2026-01-27 06:20:46,964 | INFO     | intersect: 8855766602.820913
[2026-01-27 01:21:53] 2026-01-27 06:20:46,965 | INFO     | chi2: 2.3984137577505003
[2026-01-27 01:21:53] 2026-01-27 06:20:46,965 | INFO     | sum of square deviations: 6880054580.0
[2026-01-27 01:21:53] 2026-01-27 06:20:46,967 | INFO     | sum of deviations: -16321606886.000008
[2026-01-27 01:21:53] 2026-01-27 06:20:46,967 | INFO     | mean x: 1769485985.0
[2026-01-27 01:21:53] 2026-01-27 06:20:46,967 | INFO     | mean y: 2525455.4199288255
[2026-01-27 01:21:53] 2026-01-27 06:20:46,967 | INFO     | intersect: 4200290793.1269603
[2026-01-27 01:21:53] 2026-01-27 06:20:46,968 | INFO     | chi2: 1.6296678897587444
[2026-01-27 01:21:53] 2026-01-27 06:20:46,968 | INFO     | current chi2=1.6296678897587444 (change=32.05226227157617 %)
[2026-01-27 01:21:53] 2026-01-27 06:20:46,968 | INFO     | sum of square deviations: 6519285025.0
[2026-01-27 01:21:53] 2026-01-27 06:20:46,970 | INFO     | sum of deviations: -15910673035.499987
[2026-01-27 01:21:53] 2026-01-27 06:20:46,970 | INFO     | mean x: 1769485832.5
[2026-01-27 01:21:53] 2026-01-27 06:20:46,971 | INFO     | mean y: 2525628.5398550723
[2026-01-27 01:21:53] 2026-01-27 06:20:46,971 | INFO     | intersect: 4321052953.8360815
[2026-01-27 01:21:53] 2026-01-27 06:20:46,971 | INFO     | chi2: 1.629101211133093
[2026-01-27 01:21:53] 2026-01-27 06:20:46,971 | INFO     | current chi2=1.629101211133093 (change=0.034772644734100314 %)
[2026-01-27 01:21:53] 2026-01-27 06:20:46,971 | INFO     | right removable region: 275
[2026-01-27 01:21:53] 2026-01-27 06:20:46,972 | INFO     | sum of square deviations: 6880054580.0
[2026-01-27 01:21:53] 2026-01-27 06:20:46,974 | INFO     | sum of deviations: -77496284777.99998
[2026-01-27 01:21:53] 2026-01-27 06:20:46,974 | INFO     | mean x: 1769486290.0
[2026-01-27 01:21:53] 2026-01-27 06:20:46,974 | INFO     | mean y: 2534084.181494662
[2026-01-27 01:21:53] 2026-01-27 06:20:46,974 | INFO     | intersect: 19933860477.904182
[2026-01-27 01:21:53] 2026-01-27 06:20:46,975 | INFO     | chi2: 1.0415064361492998
[2026-01-27 01:21:53] 2026-01-27 06:20:46,975 | INFO     | current chi2=1.0415064361492998 (change=56.57519755364726 %)
[2026-01-27 01:21:53] 2026-01-27 06:20:46,975 | INFO     | sum of square deviations: 6519285025.0
[2026-01-27 01:21:53] 2026-01-27 06:20:46,977 | INFO     | sum of deviations: -75295097185.5
[2026-01-27 01:21:53] 2026-01-27 06:20:46,977 | INFO     | mean x: 1769486442.5
[2026-01-27 01:21:53] 2026-01-27 06:20:46,977 | INFO     | mean y: 2533131.0108695654
[2026-01-27 01:21:53] 2026-01-27 06:20:46,977 | INFO     | intersect: 20439383666.85044
[2026-01-27 01:21:53] 2026-01-27 06:20:46,978 | INFO     | chi2: 1.026083265820606
[2026-01-27 01:21:53] 2026-01-27 06:20:46,978 | INFO     | current chi2=1.026083265820606 (change=1.480852138150673 %)
[2026-01-27 01:21:53] 2026-01-27 06:20:46,978 | INFO     | left removable region: 20
[2026-01-27 01:21:53] 2026-01-27 06:20:46,978 | INFO     | sum of square deviations: 5141528960.0
[2026-01-27 01:21:53] 2026-01-27 06:20:46,980 | INFO     | sum of deviations: -37384694361.99999
[2026-01-27 01:21:53] 2026-01-27 06:20:46,980 | INFO     | mean x: 1769486412.0
[2026-01-27 01:21:53] 2026-01-27 06:20:46,980 | INFO     | mean y: 2534216.4862745097
[2026-01-27 01:21:53] 2026-01-27 06:20:46,981 | INFO     | intersect: 12868689246.435186
[2026-01-27 01:21:53] 2026-01-27 06:20:46,981 | INFO     | chi2: 0.20881601328342989
[2026-01-27 01:21:53] 2026-01-27 06:20:46,981 | INFO     | current memory leak: -7.27 B/s (using 255 data points, chi2=0.21)
[2026-01-27 01:21:53] 2026-01-27 06:20:46,981 | INFO     | could have reported an average CPU frequency of 1729 MHz (13 samples)
[2026-01-27 01:21:53] 2026-01-27 06:20:46,982 | INFO     | ..............................
[2026-01-27 01:21:53] 2026-01-27 06:20:46,982 | INFO     | . Timing measurements:
[2026-01-27 01:21:53] 2026-01-27 06:20:46,982 | INFO     | . get job = 0 s
[2026-01-27 01:21:53] 2026-01-27 06:20:46,982 | INFO     | . initial setup = 1 s
[2026-01-27 01:21:53] 2026-01-27 06:20:46,982 | INFO     | . payload setup = 8 s
[2026-01-27 01:21:53] 2026-01-27 06:20:46,982 | INFO     | . stage-in = 0 s
[2026-01-27 01:21:53] 2026-01-27 06:20:46,982 | INFO     | . payload execution = 17399 s
[2026-01-27 01:21:53] 2026-01-27 06:20:46,982 | INFO     | . stage-out = 2 s
[2026-01-27 01:21:53] 2026-01-27 06:20:46,983 | INFO     | . log creation = 0 s
[2026-01-27 01:21:53] 2026-01-27 06:20:46,983 | INFO     | ..............................
[2026-01-27 01:21:53] 2026-01-27 06:20:47,064 | INFO     | 
[2026-01-27 01:21:53] 2026-01-27 06:20:47,065 | INFO     | job summary report
[2026-01-27 01:21:53] 2026-01-27 06:20:47,065 | INFO     | --------------------------------------------------
[2026-01-27 01:21:53] 2026-01-27 06:20:47,065 | INFO     | PanDA job id: 6983458279
[2026-01-27 01:21:53] 2026-01-27 06:20:47,065 | INFO     | task id: 48329801
[2026-01-27 01:21:53] 2026-01-27 06:20:47,065 | INFO     | errors: (none)
[2026-01-27 01:21:53] 2026-01-27 06:20:47,065 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-27 01:21:53] 2026-01-27 06:20:47,065 | INFO     | pilot state: finished 
[2026-01-27 01:21:53] 2026-01-27 06:20:47,065 | INFO     | transexitcode: 0
[2026-01-27 01:21:53] 2026-01-27 06:20:47,066 | INFO     | exeerrorcode: 0
[2026-01-27 01:21:53] 2026-01-27 06:20:47,066 | INFO     | exeerrordiag: 
[2026-01-27 01:21:53] 2026-01-27 06:20:47,066 | INFO     | exitcode: 0
[2026-01-27 01:21:53] 2026-01-27 06:20:47,066 | INFO     | exitmsg: OK
[2026-01-27 01:21:53] 2026-01-27 06:20:47,066 | INFO     | cpuconsumptiontime: 131347 s
[2026-01-27 01:21:53] 2026-01-27 06:20:47,066 | INFO     | nevents: 400
[2026-01-27 01:21:53] 2026-01-27 06:20:47,066 | INFO     | neventsw: 0
[2026-01-27 01:21:53] 2026-01-27 06:20:47,066 | INFO     | pid: 15455
[2026-01-27 01:21:53] 2026-01-27 06:20:47,066 | INFO     | pgrp: 15455
[2026-01-27 01:21:53] 2026-01-27 06:20:47,067 | INFO     | corecount: 8
[2026-01-27 01:21:53] 2026-01-27 06:20:47,067 | INFO     | event service: False
[2026-01-27 01:21:53] 2026-01-27 06:20:47,067 | INFO     | sizes: {0: 2283292, 1: 2284410, 12: 2284410, 17411: 2316585, 17412: 2316584, 17414: 2325638, 17416: 2326016}
[2026-01-27 01:21:53] 2026-01-27 06:20:47,067 | INFO     | --------------------------------------------------
[2026-01-27 01:21:53] 2026-01-27 06:20:47,067 | INFO     | 
[2026-01-27 01:21:53] 2026-01-27 06:20:47,067 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-27 01:21:53] 2026-01-27 06:20:47,079 | INFO     | time since job start (17428s) is within the limit (349056.0s)
[2026-01-27 01:21:53] 2026-01-27 06:20:47,095 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-27 01:21:53] 2026-01-27 06:20:47,095 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-27 01:21:53] 2026-01-27 06:20:47,095 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-27 01:21:53] 2026-01-27 06:20:47,095 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-27 01:21:53] 2026-01-27 06:20:47,095 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-27 01:21:53] 2026-01-27 06:20:47,096 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-27 01:21:53] 2026-01-27 06:20:47,096 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-27 01:21:53] 2026-01-27 06:20:47,096 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-27 01:21:53] 2026-01-27 06:20:47,096 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-27 01:21:53] 2026-01-27 06:20:47,096 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-27 01:21:53] 2026-01-27 06:20:47,096 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-27 01:21:53] 2026-01-27 06:20:47,096 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-27 01:21:53] 2026-01-27 06:20:47,097 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-27 01:21:53] 2026-01-27 06:20:47,097 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-27 01:21:53] 2026-01-27 06:20:47,097 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-27 01:21:53] 2026-01-27 06:20:47,097 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-27 01:21:53] 2026-01-27 06:20:47,097 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-27 01:21:53] 2026-01-27 06:20:47,097 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-27 01:21:53] 2026-01-27 06:20:47,097 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-27 01:21:53] 2026-01-27 06:20:47,097 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-27 01:21:53] 2026-01-27 06:20:47,098 | INFO     | job 6983458279 has completed (purged errors)
[2026-01-27 01:21:53] 2026-01-27 06:20:47,098 | INFO     | overall cleanup function is called
[2026-01-27 01:21:53] 2026-01-27 06:20:48,105 | INFO     | --- collectZombieJob: --- 10, [15455]
[2026-01-27 01:21:53] 2026-01-27 06:20:48,106 | INFO     | zombie collector waiting for pid 15455
[2026-01-27 01:21:53] 2026-01-27 06:20:48,106 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-27 01:21:53] 2026-01-27 06:20:48,106 | INFO     | collected zombie processes
[2026-01-27 01:21:53] 2026-01-27 06:20:48,106 | INFO     | will attempt to kill all subprocesses of pid=15455
[2026-01-27 01:21:53] 2026-01-27 06:20:48,198 | INFO     | process IDs to be killed: [15455] (in reverse order)
[2026-01-27 01:21:53] 2026-01-27 06:20:48,257 | WARNING  | found no corresponding commands to process id(s)
[2026-01-27 01:21:53] 2026-01-27 06:20:48,258 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-27 01:21:53] 2026-01-27 06:20:48,262 | INFO     | did not find any defunct processes belonging to 15455
[2026-01-27 01:21:53] 2026-01-27 06:20:48,266 | INFO     | did not find any defunct processes belonging to 15455
[2026-01-27 01:21:53] 2026-01-27 06:20:48,266 | INFO     | ready for new job
[2026-01-27 01:21:53] 2026-01-27 06:20:48,267 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-27 01:21:53] 2026-01-27 06:20:48,269 | INFO     | **************************************
[2026-01-27 01:21:53] 2026-01-27 06:20:48,269 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-27 01:21:53] 2026-01-27 06:20:48,269 | INFO     | **************************************
[2026-01-27 01:21:53] 2026-01-27 06:20:48,269 | INFO     | 
[2026-01-27 01:21:53] 2026-01-27 06:20:48,270 | INFO     | architecture information:
[2026-01-27 01:21:53] 2026-01-27 06:20:48,270 | INFO     | executing command: cat /etc/os-release
[2026-01-27 01:21:53] 2026-01-27 06:20:48,290 | INFO     | cat /etc/os-release:
[2026-01-27 01:21:53] NAME="CentOS Linux"
[2026-01-27 01:21:53] VERSION="7 (Core)"
[2026-01-27 01:21:53] ID="centos"
[2026-01-27 01:21:53] ID_LIKE="rhel fedora"
[2026-01-27 01:21:53] VERSION_ID="7"
[2026-01-27 01:21:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-27 01:21:53] ANSI_COLOR="0;31"
[2026-01-27 01:21:53] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-27 01:21:53] HOME_URL="https://www.centos.org/"
[2026-01-27 01:21:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-27 01:21:53] 
[2026-01-27 01:21:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-27 01:21:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-27 01:21:53] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-27 01:21:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-27 01:21:53] 
[2026-01-27 01:21:53] 2026-01-27 06:20:48,290 | INFO     | **************************************
[2026-01-27 01:21:53] 2026-01-27 06:20:48,793 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-27 01:21:53] 2026-01-27 06:20:48,815 | INFO     | sufficient remaining disk space (18424528896 B)
[2026-01-27 01:21:53] 2026-01-27 06:20:48,815 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-27 01:21:53] 2026-01-27 06:20:48,816 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 01:21:53] 2026-01-27 06:20:48,816 | INFO     | update_server=False
[2026-01-27 01:21:53] 2026-01-27 06:20:48,816 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 01:21:53] 2026-01-27 06:20:48,817 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 01:21:53] 2026-01-27 06:20:48,817 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 01:21:53] 2026-01-27 06:20:48,817 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 01:21:53] 2026-01-27 06:20:48,818 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-27 01:21:53] 2026-01-27 06:20:48,818 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 01:21:53] 2026-01-27 06:20:48,819 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 01:21:53] 2026-01-27 06:20:48,819 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 01:21:53] 2026-01-27 06:20:48,837 | INFO     | all data control threads have been joined
[2026-01-27 01:21:53] 2026-01-27 06:20:49,064 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-27 01:21:53] 2026-01-27 06:20:49,064 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-27 01:21:53] 2026-01-27 06:20:49,072 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 01:21:53] 2026-01-27 06:20:49,072 | INFO     | will abort loop
[2026-01-27 01:21:53] 2026-01-27 06:20:49,080 | INFO     | all payload control threads have been joined
[2026-01-27 01:21:53] 2026-01-27 06:20:49,820 | INFO     | [job] retrieve thread has finished
[2026-01-27 01:21:53] 2026-01-27 06:20:49,823 | INFO     | [job] queue monitor thread has finished
[2026-01-27 01:21:53] 2026-01-27 06:20:49,843 | INFO     | [data] control thread has finished
[2026-01-27 01:21:53] 2026-01-27 06:20:49,844 | INFO     | all job control threads have been joined
[2026-01-27 01:21:53] 2026-01-27 06:20:49,965 | INFO     | [payload] validate_post thread has finished
[2026-01-27 01:21:53] 2026-01-27 06:20:50,078 | INFO     | [job] job monitor thread has finished
[2026-01-27 01:21:53] 2026-01-27 06:20:50,086 | INFO     | [payload] control thread has finished
[2026-01-27 01:21:53] 2026-01-27 06:20:50,374 | INFO     | [data] copytool_in thread has finished
[2026-01-27 01:21:53] 2026-01-27 06:20:50,667 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 01:21:53] 2026-01-27 06:20:50,806 | INFO     | [job] validate thread has finished
[2026-01-27 01:21:53] 2026-01-27 06:20:50,806 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 01:21:53] 2026-01-27 06:20:50,807 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 01:21:53] 2026-01-27 06:20:50,822 | INFO     | [data] copytool_out thread has finished
[2026-01-27 01:21:53] 2026-01-27 06:20:50,849 | INFO     | [job] control thread has finished
[2026-01-27 01:21:53] 2026-01-27 06:20:50,952 | INFO     | [payload] failed_post thread has finished
[2026-01-27 01:21:53] 2026-01-27 06:20:52,824 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 01:21:53] 2026-01-27 06:20:59,624 | INFO     | job.realtimelogging is not enabled
[2026-01-27 01:21:53] 2026-01-27 06:21:00,626 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 01:21:53] 2026-01-27 06:21:47,397 | INFO     | [monitor] cgroup control has ended
[2026-01-27 01:21:53] 2026-01-27 06:21:48,066 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140194262734656)>', '<ExcThread(monitor, started 140193688442624)>']
[2026-01-27 01:21:53] 2026-01-27 06:21:48,078 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 01:21:53] 2026-01-27 06:21:48,078 | INFO     | [monitor] control thread has ended
[2026-01-27 01:21:53] 2026-01-27 06:21:53,088 | INFO     | all workflow threads have been joined
[2026-01-27 01:21:53] 2026-01-27 06:21:53,088 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 01:21:53] 2026-01-27 06:21:53,089 | INFO     | traces error code: 0
[2026-01-27 01:21:53] 2026-01-27 06:21:53,089 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 01:21:53] 2026-01-27 06:21:53,202 [wrapper] ==== pilot stdout END ====
[2026-01-27 01:21:53] 2026-01-27 06:21:53,206 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 01:21:53] 2026-01-27 06:21:53,211 [wrapper] pilotpid: 13001
[2026-01-27 01:21:53] 2026-01-27 06:21:53,216 [wrapper] Pilot exit status: 0
[2026-01-27 01:21:53] 2026-01-27 06:21:53,234 [wrapper] pandaids: 6983458279 6983458279
[2026-01-27 01:21:53] 2026-01-27 06:21:53,290 [wrapper] cleanup supervisor_pilot 20130 13002
[2026-01-27 01:21:53] 2026-01-27 06:21:53,296 [wrapper] Test setup, not cleaning
[2026-01-27 01:21:53] 2026-01-27 06:21:53,301 [wrapper] apfmon messages muted
[2026-01-27 01:21:53] 2026-01-27 06:21:53,306 [wrapper] ==== wrapper stdout END ====
[2026-01-27 01:21:53] 2026-01-27 06:21:53,311 [wrapper] ==== wrapper stderr END ====
[2026-01-27 01:21:53]  *** Error codes and diagnostics ***
[2026-01-27 01:21:53]     "exeErrorCode": 0,
[2026-01-27 01:21:53]     "exeErrorDiag": "",
[2026-01-27 01:21:53]     "pilotErrorCode": 0,
[2026-01-27 01:21:53]     "pilotErrorDiag": "",
[2026-01-27 01:21:53]  *** Listing of results directory ***
[2026-01-27 01:21:53] total 735560
[2026-01-27 01:21:53] drwx------ 5 boincer umatlas      4096 Jan 14 05:00 pilot3
[2026-01-27 01:21:53] -rw-r--r-- 1 boincer umatlas    584422 Jan 25 15:48 pilot3.tar.gz
[2026-01-27 01:21:53] -rwx------ 1 boincer umatlas     36322 Jan 25 15:52 runpilot2-wrapper.sh
[2026-01-27 01:21:53] -rw-r--r-- 1 boincer umatlas      5111 Jan 25 15:54 queuedata.json
[2026-01-27 01:21:53] -rw-r--r-- 1 boincer umatlas       100 Jan 26 20:09 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 01:21:53] -rwxr-xr-x 1 boincer umatlas      7986 Jan 26 20:09 run_atlas
[2026-01-27 01:21:53] -rw-r--r-- 1 boincer umatlas       105 Jan 26 20:09 job.xml
[2026-01-27 01:21:53] -rw-r--r-- 3 boincer umatlas 272881683 Jan 26 20:09 EVNT.48329799._000002.pool.root.1
[2026-01-27 01:21:53] -rw-r--r-- 3 boincer umatlas 272881683 Jan 26 20:09 ATLAS.root_0
[2026-01-27 01:21:53] -rw-r--r-- 2 boincer umatlas     15845 Jan 26 20:09 start_atlas.sh
[2026-01-27 01:21:53] drwxrwx--x 2 boincer umatlas      4096 Jan 26 20:09 shared
[2026-01-27 01:21:53] -rw-r--r-- 2 boincer umatlas    597784 Jan 26 20:09 input.tar.gz
[2026-01-27 01:21:53] -rw-r--r-- 1 boincer umatlas         0 Jan 26 20:09 boinc_lockfile
[2026-01-27 01:21:53] -rw-r--r-- 1 boincer umatlas      2633 Jan 26 20:30 pandaJob.out
[2026-01-27 01:21:53] -rw------- 1 boincer umatlas        57 Jan 26 20:30 setup.sh.local
[2026-01-27 01:21:53] -rw------- 1 boincer umatlas   1006441 Jan 26 20:30 agis_schedconf.cvmfs.json
[2026-01-27 01:21:53] -rw------- 1 boincer umatlas       433 Jan 26 20:30 workernode_map.json
[2026-01-27 01:21:53] -rw-r--r-- 1 boincer umatlas      5911 Jan 27 01:19 init_data.xml
[2026-01-27 01:21:53] -rw------- 1 boincer umatlas 197724621 Jan 27 01:20 HITS.48329801._000028.pool.root.1
[2026-01-27 01:21:53] -rw-r--r-- 1 boincer umatlas       532 Jan 27 01:20 boinc_task_state.xml
[2026-01-27 01:21:53] -rw------- 1 boincer umatlas        96 Jan 27 01:20 pilot_heartbeat.json
[2026-01-27 01:21:53] -rw------- 1 boincer umatlas      1064 Jan 27 01:20 memory_monitor_summary.json
[2026-01-27 01:21:53] -rw------- 1 boincer umatlas   1516246 Jan 27 01:20 agis_ddmendpoints.agis.ALL.json
[2026-01-27 01:21:53] -rw------- 1 boincer umatlas    490370 Jan 27 01:20 log.48329801._000028.job.log.tgz.1
[2026-01-27 01:21:53] -rw------- 1 boincer umatlas      6392 Jan 27 01:20 heartbeat.json
[2026-01-27 01:21:53] -rw-r--r-- 1 boincer umatlas      8192 Jan 27 01:21 boinc_mmap_file
[2026-01-27 01:21:53] -rw-r--r-- 1 boincer umatlas        29 Jan 27 01:21 wrapper_checkpoint.txt
[2026-01-27 01:21:53] -rw------- 1 boincer umatlas      4806 Jan 27 01:21 pilotlog.txt
[2026-01-27 01:21:53] -rw------- 1 boincer umatlas   2401893 Jan 27 01:21 log.48329801._000028.job.log.1
[2026-01-27 01:21:53] -rw------- 1 boincer umatlas       357 Jan 27 01:21 output.list
[2026-01-27 01:21:53] -rw-r--r-- 1 boincer umatlas       620 Jan 27 01:21 runtime_log
[2026-01-27 01:21:53] -rw------- 1 boincer umatlas   2908160 Jan 27 01:21 result.tar.gz
[2026-01-27 01:21:53] -rw-r--r-- 1 boincer umatlas      9427 Jan 27 01:21 runtime_log.err
[2026-01-27 01:21:53] -rw------- 1 boincer umatlas       789 Jan 27 01:21 j9lLDmmGM48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmVs1KDmqL5jBn.diag
[2026-01-27 01:21:53] -rw-r--r-- 1 boincer umatlas     23112 Jan 27 01:21 stderr.txt
[2026-01-27 01:21:53] HITS file was successfully produced:
[2026-01-27 01:21:53] -rw------- 1 boincer umatlas 197724621 Jan 27 01:20 shared/HITS.pool.root.1
[2026-01-27 01:21:53]  *** Contents of shared directory: ***
[2026-01-27 01:21:53] total 463024
[2026-01-27 01:21:53] -rw-r--r-- 3 boincer umatlas 272881683 Jan 26 20:09 ATLAS.root_0
[2026-01-27 01:21:53] -rw-r--r-- 2 boincer umatlas     15845 Jan 26 20:09 start_atlas.sh
[2026-01-27 01:21:53] -rw-r--r-- 2 boincer umatlas    597784 Jan 26 20:09 input.tar.gz
[2026-01-27 01:21:53] -rw------- 1 boincer umatlas 197724621 Jan 27 01:20 HITS.pool.root.1
[2026-01-27 01:21:53] -rw------- 1 boincer umatlas   2908160 Jan 27 01:21 result.tar.gz
01:21:55 (9081): run_atlas exited; CPU time 131305.213861
01:21:55 (9081): called boinc_finish(0)

</stderr_txt>
]]>

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