Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:23:08 (38797): wrapper (7.7.26015): starting
20:23:08 (38797): wrapper: running run_atlas (--nthreads 9)
[2026-01-26 20:23:08] Arguments: --nthreads 9
[2026-01-26 20:23:08] Threads: 9
[2026-01-26 20:23:08] Checking for CVMFS
[2026-01-26 20:23:08] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 20:23:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 20:23:08] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 20:23:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 20:23:09] 2.13.3.0 2295398 42135 110316 155568 1 50 19933962 37030912 1832 16776704 0 28914041 99.970 1837951 34797 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-26 20:23:09] CVMFS is ok
[2026-01-26 20:23:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 20:23:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 20:23:09] Further information can be found at the LHC@home message board.
[2026-01-26 20:23:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 20:23:09] Checking for apptainer binary...
[2026-01-26 20:23:09] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 20:23:09] Running /usr/bin/apptainer --version
[2026-01-26 20:23:09] apptainer version 1.4.5-2.el9
[2026-01-26 20:23:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 20:23:09] c-205-36.aglt2.org
[2026-01-26 20:23:09] apptainer works
[2026-01-26 20:23:09] Set ATHENA_PROC_NUMBER=9
[2026-01-26 20:23:09] Set ATHENA_CORE_NUMBER=9
[2026-01-26 20:23:09] Starting ATLAS job with PandaID=6982375416
[2026-01-26 20:23:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 21:45:36]  *** The last 200 lines of the pilot log: ***
[2026-01-26 21:45:36]  filesize=352666
[2026-01-26 21:45:36]  filetype=log
[2026-01-26 21:45:36]  guid=d8718650-2ba0-448b-a360-460f4de42456
[2026-01-26 21:45:36]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-01-26 21:45:36]  is_altstaged=None
[2026-01-26 21:45:36]  is_tar=False
[2026-01-26 21:45:36]  lfn=log.48310724._004569.job.log.tgz.1
[2026-01-26 21:45:36]  mtime=0
[2026-01-26 21:45:36]  protocol_id=None
[2026-01-26 21:45:36]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-26 21:45:36]  replicas=None
[2026-01-26 21:45:36]  scope=mc23_13p6TeV
[2026-01-26 21:45:36]  status=None
[2026-01-26 21:45:36]  status_code=0
[2026-01-26 21:45:36]  storage_token=
[2026-01-26 21:45:36]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6982375416/log.48310724._004569.job.log.tgz.1
[2026-01-26 21:45:36]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c4/78/log.48310724._004569.job.log.tgz.1
[2026-01-26 21:45:36]  workdir=None
[2026-01-26 21:45:36] ]
[2026-01-26 21:45:36] 2026-01-27 02:44:50,059 | INFO     | monitor loop #370: job 0:6982375416 is in state 'stageout'
[2026-01-26 21:45:36] 2026-01-27 02:44:50,059 | WARNING  | aborting job monitor tasks since payload process 46866 is not running
[2026-01-26 21:45:36] 2026-01-27 02:44:50,115 | INFO     | transferring file log.48310724._004569.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6982375416/log.48310724._004569.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-26 21:45:36] 2026-01-27 02:44:50,116 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6982375416/log.48310724._004569.job.log.tgz.1 /tmp/boinchome/slots/2/log.48310724._004569.job
[2026-01-26 21:45:36] 2026-01-27 02:44:50,131 | INFO     | adding to output.list: log.48310724._004569.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c4/78/log.48310724._004569.job.log.tg
[2026-01-26 21:45:36] 2026-01-27 02:44:50,132 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-26 21:45:36] 2026-01-27 02:44:50,132 | INFO     | summary of transferred files:
[2026-01-26 21:45:36] 2026-01-27 02:44:50,132 | INFO     |  -- lfn=log.48310724._004569.job.log.tgz.1, status_code=0, status=transferred
[2026-01-26 21:45:36] 2026-01-27 02:44:50,132 | INFO     | stage-out finished correctly
[2026-01-26 21:45:36] 2026-01-27 02:44:51,115 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-26 21:45:36] 2026-01-27 02:44:51,990 | INFO     | time since job start (4888s) is within the limit (349056.0s)
[2026-01-26 21:45:36] 2026-01-27 02:44:52,238 | INFO     | job 6982375416 has state=finished
[2026-01-26 21:45:36] 2026-01-27 02:44:52,238 | INFO     | preparing for final server update for job 6982375416 in state='finished'
[2026-01-26 21:45:36] 2026-01-27 02:44:52,239 | INFO     | reading metadata from: /tmp/boinchome/slots/2/PanDA_Pilot-6982375416/jobReport.json
[2026-01-26 21:45:36] 2026-01-27 02:44:52,241 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/2/workernode_map.json
[2026-01-26 21:45:36] 2026-01-27 02:44:52,242 | INFO     | this job has now completed (state=finished)
[2026-01-26 21:45:36] 2026-01-27 02:44:52,242 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-26 21:45:36] 2026-01-27 02:44:52,242 | INFO     | log transfer has been attempted: DONE
[2026-01-26 21:45:36] 2026-01-27 02:44:52,242 | INFO     | job 6982375416 has finished - writing final server update
[2026-01-26 21:45:36] 2026-01-27 02:44:52,242 | INFO     | total number of processed events: 400 (read)
[2026-01-26 21:45:36] 2026-01-27 02:44:52,249 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6982375416/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 21:45:36] 2026-01-27 02:44:52,250 | INFO     | extracted standard info from prmon json
[2026-01-26 21:45:36] 2026-01-27 02:44:52,250 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 21:45:36] 2026-01-27 02:44:52,250 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 21:45:36] 2026-01-27 02:44:52,250 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 21:45:36] 2026-01-27 02:44:52,250 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 21:45:36] 2026-01-27 02:44:52,252 | INFO     | fitting pss+swap vs Time
[2026-01-26 21:45:36] 2026-01-27 02:44:52,253 | INFO     | sum of square deviations: 120605052.0
[2026-01-26 21:45:36] 2026-01-27 02:44:52,253 | INFO     | sum of deviations: -10889136230.0
[2026-01-26 21:45:36] 2026-01-27 02:44:52,253 | INFO     | mean x: 1769479524.0
[2026-01-26 21:45:36] 2026-01-27 02:44:52,253 | INFO     | mean y: 2731115.328767123
[2026-01-26 21:45:36] 2026-01-27 02:44:52,254 | INFO     | intersect: 159764725107.35123
[2026-01-26 21:45:36] 2026-01-27 02:44:52,254 | INFO     | chi2: 0.0312888379239421
[2026-01-26 21:45:36] 2026-01-27 02:44:52,254 | INFO     | current memory leak: -90.29 B/s (using 73 data points, chi2=0.03)
[2026-01-26 21:45:36] 2026-01-27 02:44:52,254 | INFO     | could have reported an average CPU frequency of 2656 MHz (6 samples)
[2026-01-26 21:45:36] 2026-01-27 02:44:52,255 | INFO     | ..............................
[2026-01-26 21:45:36] 2026-01-27 02:44:52,255 | INFO     | . Timing measurements:
[2026-01-26 21:45:36] 2026-01-27 02:44:52,255 | INFO     | . get job = 0 s
[2026-01-26 21:45:36] 2026-01-27 02:44:52,255 | INFO     | . initial setup = 6 s
[2026-01-26 21:45:36] 2026-01-27 02:44:52,255 | INFO     | . payload setup = 5 s
[2026-01-26 21:45:36] 2026-01-27 02:44:52,255 | INFO     | . stage-in = 0 s
[2026-01-26 21:45:36] 2026-01-27 02:44:52,255 | INFO     | . payload execution = 4864 s
[2026-01-26 21:45:36] 2026-01-27 02:44:52,255 | INFO     | . stage-out = 0 s
[2026-01-26 21:45:36] 2026-01-27 02:44:52,256 | INFO     | . log creation = 0 s
[2026-01-26 21:45:36] 2026-01-27 02:44:52,256 | INFO     | ..............................
[2026-01-26 21:45:36] 2026-01-27 02:44:52,495 | INFO     | 
[2026-01-26 21:45:36] 2026-01-27 02:44:52,495 | INFO     | job summary report
[2026-01-26 21:45:36] 2026-01-27 02:44:52,495 | INFO     | --------------------------------------------------
[2026-01-26 21:45:36] 2026-01-27 02:44:52,495 | INFO     | PanDA job id: 6982375416
[2026-01-26 21:45:36] 2026-01-27 02:44:52,495 | INFO     | task id: 48310724
[2026-01-26 21:45:36] 2026-01-27 02:44:52,495 | INFO     | errors: (none)
[2026-01-26 21:45:36] 2026-01-27 02:44:52,496 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 21:45:36] 2026-01-27 02:44:52,496 | INFO     | pilot state: finished 
[2026-01-26 21:45:36] 2026-01-27 02:44:52,496 | INFO     | transexitcode: 0
[2026-01-26 21:45:36] 2026-01-27 02:44:52,496 | INFO     | exeerrorcode: 0
[2026-01-26 21:45:36] 2026-01-27 02:44:52,496 | INFO     | exeerrordiag: 
[2026-01-26 21:45:36] 2026-01-27 02:44:52,496 | INFO     | exitcode: 0
[2026-01-26 21:45:36] 2026-01-27 02:44:52,496 | INFO     | exitmsg: OK
[2026-01-26 21:45:36] 2026-01-27 02:44:52,496 | INFO     | cpuconsumptiontime: 40416 s
[2026-01-26 21:45:36] 2026-01-27 02:44:52,496 | INFO     | nevents: 400
[2026-01-26 21:45:36] 2026-01-27 02:44:52,497 | INFO     | neventsw: 0
[2026-01-26 21:45:36] 2026-01-27 02:44:52,497 | INFO     | pid: 46866
[2026-01-26 21:45:36] 2026-01-27 02:44:52,497 | INFO     | pgrp: 46866
[2026-01-26 21:45:36] 2026-01-27 02:44:52,497 | INFO     | corecount: 9
[2026-01-26 21:45:36] 2026-01-27 02:44:52,497 | INFO     | event service: False
[2026-01-26 21:45:36] 2026-01-27 02:44:52,497 | INFO     | sizes: {0: 2283818, 1: 2284279, 11: 2284279, 4873: 2310576, 4874: 2310575, 4876: 2319629, 4877: 2319813, 4878: 2320007}
[2026-01-26 21:45:36] 2026-01-27 02:44:52,497 | INFO     | --------------------------------------------------
[2026-01-26 21:45:36] 2026-01-27 02:44:52,497 | INFO     | 
[2026-01-26 21:45:36] 2026-01-27 02:44:52,498 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-26 21:45:36] 2026-01-27 02:44:52,514 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 21:45:36] 2026-01-27 02:44:52,514 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 21:45:36] 2026-01-27 02:44:52,514 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 21:45:36] 2026-01-27 02:44:52,515 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 21:45:36] 2026-01-27 02:44:52,515 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 21:45:36] 2026-01-27 02:44:52,515 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 21:45:36] 2026-01-27 02:44:52,515 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 21:45:36] 2026-01-27 02:44:52,515 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 21:45:36] 2026-01-27 02:44:52,515 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 21:45:36] 2026-01-27 02:44:52,515 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 21:45:36] 2026-01-27 02:44:52,515 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 21:45:36] 2026-01-27 02:44:52,515 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 21:45:36] 2026-01-27 02:44:52,516 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 21:45:36] 2026-01-27 02:44:52,516 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 21:45:36] 2026-01-27 02:44:52,516 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 21:45:36] 2026-01-27 02:44:52,516 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 21:45:36] 2026-01-27 02:44:52,516 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 21:45:36] 2026-01-27 02:44:52,516 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 21:45:36] 2026-01-27 02:44:52,516 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 21:45:36] 2026-01-27 02:44:52,516 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 21:45:36] 2026-01-27 02:44:52,517 | INFO     | job 6982375416 has completed (purged errors)
[2026-01-26 21:45:36] 2026-01-27 02:44:52,517 | INFO     | overall cleanup function is called
[2026-01-26 21:45:36] 2026-01-27 02:44:53,525 | INFO     | --- collectZombieJob: --- 10, [46866]
[2026-01-26 21:45:36] 2026-01-27 02:44:53,525 | INFO     | zombie collector waiting for pid 46866
[2026-01-26 21:45:36] 2026-01-27 02:44:53,525 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 21:45:36] 2026-01-27 02:44:53,526 | INFO     | collected zombie processes
[2026-01-26 21:45:36] 2026-01-27 02:44:53,526 | INFO     | will attempt to kill all subprocesses of pid=46866
[2026-01-26 21:45:36] 2026-01-27 02:44:53,718 | INFO     | process IDs to be killed: [46866] (in reverse order)
[2026-01-26 21:45:36] 2026-01-27 02:44:53,772 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 21:45:36] 2026-01-27 02:44:53,772 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 21:45:36] 2026-01-27 02:44:53,778 | INFO     | did not find any defunct processes belonging to 46866
[2026-01-26 21:45:36] 2026-01-27 02:44:53,782 | INFO     | did not find any defunct processes belonging to 46866
[2026-01-26 21:45:36] 2026-01-27 02:44:53,782 | INFO     | ready for new job
[2026-01-26 21:45:36] 2026-01-27 02:44:53,782 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 21:45:36] 2026-01-27 02:44:53,784 | INFO     | **************************************
[2026-01-26 21:45:36] 2026-01-27 02:44:53,784 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 21:45:36] 2026-01-27 02:44:53,784 | INFO     | **************************************
[2026-01-26 21:45:36] 2026-01-27 02:44:53,784 | INFO     | 
[2026-01-26 21:45:36] 2026-01-27 02:44:53,786 | INFO     | architecture information:
[2026-01-26 21:45:36] 2026-01-27 02:44:53,787 | INFO     | executing command: cat /etc/os-release
[2026-01-26 21:45:36] 2026-01-27 02:44:53,799 | INFO     | cat /etc/os-release:
[2026-01-26 21:45:36] NAME="CentOS Linux"
[2026-01-26 21:45:36] VERSION="7 (Core)"
[2026-01-26 21:45:36] ID="centos"
[2026-01-26 21:45:36] ID_LIKE="rhel fedora"
[2026-01-26 21:45:36] VERSION_ID="7"
[2026-01-26 21:45:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 21:45:36] ANSI_COLOR="0;31"
[2026-01-26 21:45:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 21:45:36] HOME_URL="https://www.centos.org/"
[2026-01-26 21:45:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 21:45:36] 
[2026-01-26 21:45:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 21:45:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 21:45:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 21:45:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 21:45:36] 
[2026-01-26 21:45:36] 2026-01-27 02:44:53,800 | INFO     | **************************************
[2026-01-26 21:45:36] 2026-01-27 02:44:54,303 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-26 21:45:36] 2026-01-27 02:44:54,315 | INFO     | sufficient remaining disk space (39945502720 B)
[2026-01-26 21:45:36] 2026-01-27 02:44:54,316 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 21:45:36] 2026-01-27 02:44:54,316 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 21:45:36] 2026-01-27 02:44:54,316 | INFO     | update_server=False
[2026-01-26 21:45:36] 2026-01-27 02:44:54,316 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 21:45:36] 2026-01-27 02:44:54,316 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 21:45:36] 2026-01-27 02:44:54,317 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 21:45:36] 2026-01-27 02:44:54,317 | INFO     | aborting loop
[2026-01-26 21:45:36] 2026-01-27 02:44:54,929 | INFO     | all job control threads have been joined
[2026-01-26 21:45:36] 2026-01-27 02:44:55,225 | INFO     | all payload control threads have been joined
[2026-01-26 21:45:36] 2026-01-27 02:44:55,237 | INFO     | all data control threads have been joined
[2026-01-26 21:45:36] 2026-01-27 02:44:55,322 | INFO     | [job] retrieve thread has finished
[2026-01-26 21:45:36] 2026-01-27 02:44:55,322 | INFO     | [job] queue monitor thread has finished
[2026-01-26 21:45:36] 2026-01-27 02:44:55,323 | INFO     | [job] job monitor thread has finished
[2026-01-26 21:45:36] 2026-01-27 02:44:55,348 | INFO     | [payload] validate_post thread has finished
[2026-01-26 21:45:36] 2026-01-27 02:44:55,567 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 21:45:36] 2026-01-27 02:44:55,744 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 21:45:36] 2026-01-27 02:44:55,759 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 21:45:36] 2026-01-27 02:44:55,935 | INFO     | [job] control thread has finished
[2026-01-26 21:45:36] 2026-01-27 02:44:55,976 | INFO     | [data] copytool_in thread has finished
[2026-01-26 21:45:36] 2026-01-27 02:44:56,230 | INFO     | [payload] control thread has finished
[2026-01-26 21:45:36] 2026-01-27 02:44:56,234 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 21:45:36] 2026-01-27 02:44:56,242 | INFO     | [data] control thread has finished
[2026-01-26 21:45:36] 2026-01-27 02:44:56,378 | INFO     | [payload] failed_post thread has finished
[2026-01-26 21:45:36] 2026-01-27 02:44:56,570 | INFO     | [job] validate thread has finished
[2026-01-26 21:45:36] 2026-01-27 02:44:57,221 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 21:45:36] 2026-01-27 02:44:57,749 | INFO     | [data] copytool_out thread has finished
[2026-01-26 21:45:36] 2026-01-27 02:45:01,226 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 21:45:36] 2026-01-27 02:45:04,405 | INFO     | job.realtimelogging is not enabled
[2026-01-26 21:45:36] 2026-01-27 02:45:05,410 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 21:45:36] 2026-01-27 02:45:25,310 | INFO     | PID=42483 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-26 21:45:36] 2026-01-27 02:45:25,311 | INFO     | .. there are 3 such processes running
[2026-01-26 21:45:36] 2026-01-27 02:45:25,311 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 21:45:36] 2026-01-27 02:45:25,312 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 21:45:36] 2026-01-27 02:45:25,312 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 21:45:36] 2026-01-27 02:45:29,852 | INFO     | [monitor] cgroup control has ended
[2026-01-26 21:45:36] 2026-01-27 02:45:31,599 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140336133080896)>', '<ExcThread(monitor, started 140335497864960)>']
[2026-01-26 21:45:36] 2026-01-27 02:45:32,345 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 21:45:36] 2026-01-27 02:45:32,345 | INFO     | [monitor] control thread has ended
[2026-01-26 21:45:36] 2026-01-27 02:45:36,624 | INFO     | all workflow threads have been joined
[2026-01-26 21:45:36] 2026-01-27 02:45:36,625 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 21:45:36] 2026-01-27 02:45:36,625 | INFO     | traces error code: 0
[2026-01-26 21:45:36] 2026-01-27 02:45:36,625 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 21:45:36] 2026-01-27 02:45:36,731 [wrapper] ==== pilot stdout END ====
[2026-01-26 21:45:36] 2026-01-27 02:45:36,733 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 21:45:36] 2026-01-27 02:45:36,736 [wrapper] pilotpid: 42483
[2026-01-26 21:45:36] 2026-01-27 02:45:36,738 [wrapper] Pilot exit status: 0
[2026-01-26 21:45:36] 2026-01-27 02:45:36,747 [wrapper] pandaids: 6982375416
[2026-01-26 21:45:36] 2026-01-27 02:45:36,781 [wrapper] cleanup supervisor_pilot  103829 42484
[2026-01-26 21:45:36] 2026-01-27 02:45:36,784 [wrapper] Test setup, not cleaning
[2026-01-26 21:45:36] 2026-01-27 02:45:36,787 [wrapper] apfmon messages muted
[2026-01-26 21:45:36] 2026-01-27 02:45:36,789 [wrapper] ==== wrapper stdout END ====
[2026-01-26 21:45:36] 2026-01-27 02:45:36,791 [wrapper] ==== wrapper stderr END ====
[2026-01-26 21:45:36]  *** Error codes and diagnostics ***
[2026-01-26 21:45:36]     "exeErrorCode": 0,
[2026-01-26 21:45:36]     "exeErrorDiag": "",
[2026-01-26 21:45:36]     "pilotErrorCode": 0,
[2026-01-26 21:45:36]     "pilotErrorDiag": "",
[2026-01-26 21:45:36]  *** Listing of results directory ***
[2026-01-26 21:45:36] total 667752
[2026-01-26 21:45:36] -rw-r--r--. 1 boincer umatlas    584422 Jan 24 21:18 pilot3.tar.gz
[2026-01-26 21:45:36] -rwx------. 1 boincer umatlas     36322 Jan 24 21:22 runpilot2-wrapper.sh
[2026-01-26 21:45:36] -rw-r--r--. 1 boincer umatlas      5111 Jan 24 21:26 queuedata.json
[2026-01-26 21:45:36] -rw-r--r--. 1 boincer umatlas       100 Jan 26 20:23 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 21:45:36] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 26 20:23 run_atlas
[2026-01-26 21:45:36] -rw-r--r--. 1 boincer umatlas       105 Jan 26 20:23 job.xml
[2026-01-26 21:45:36] -rw-r--r--. 2 boincer umatlas 496338475 Jan 26 20:23 EVNT.48310721._000092.pool.root.1
[2026-01-26 21:45:36] -rw-r--r--. 2 boincer umatlas     15845 Jan 26 20:23 start_atlas.sh
[2026-01-26 21:45:36] drwxrwx--x. 2 boincer umatlas      4096 Jan 26 20:23 shared
[2026-01-26 21:45:36] -rw-r--r--. 2 boincer umatlas    597765 Jan 26 20:23 input.tar.gz
[2026-01-26 21:45:36] -rw-r--r--. 1 boincer umatlas         0 Jan 26 20:23 boinc_lockfile
[2026-01-26 21:45:36] -rw-r--r--. 1 boincer umatlas      2533 Jan 26 20:23 pandaJob.out
[2026-01-26 21:45:36] -rw-------. 1 boincer umatlas   1006441 Jan 26 20:23 agis_schedconf.cvmfs.json
[2026-01-26 21:45:36] -rw-------. 1 boincer umatlas   1516246 Jan 26 20:23 agis_ddmendpoints.agis.ALL.json
[2026-01-26 21:45:36] -rw-------. 1 boincer umatlas       440 Jan 26 20:23 workernode_map.json
[2026-01-26 21:45:36] drwx------. 5 boincer umatlas      4096 Jan 26 20:23 pilot3
[2026-01-26 21:45:36] -rw-r--r--. 1 boincer umatlas      6530 Jan 26 21:37 init_data.xml
[2026-01-26 21:45:36] -rw-------. 1 boincer umatlas 181345817 Jan 26 21:44 HITS.48310724._004569.pool.root.1
[2026-01-26 21:45:36] -rw-r--r--. 1 boincer umatlas       530 Jan 26 21:44 boinc_task_state.xml
[2026-01-26 21:45:36] -rw-------. 1 boincer umatlas      1031 Jan 26 21:44 memory_monitor_summary.json
[2026-01-26 21:45:36] -rw-------. 1 boincer umatlas    352666 Jan 26 21:44 log.48310724._004569.job.log.tgz.1
[2026-01-26 21:45:36] -rw-------. 1 boincer umatlas      6379 Jan 26 21:44 heartbeat.json
[2026-01-26 21:45:36] -rw-------. 1 boincer umatlas        95 Jan 26 21:45 pilot_heartbeat.json
[2026-01-26 21:45:36] -rw-r--r--. 1 boincer umatlas      8192 Jan 26 21:45 boinc_mmap_file
[2026-01-26 21:45:36] -rw-r--r--. 1 boincer umatlas        27 Jan 26 21:45 wrapper_checkpoint.txt
[2026-01-26 21:45:36] -rw-------. 1 boincer umatlas      4889 Jan 26 21:45 pilotlog.txt
[2026-01-26 21:45:36] -rw-------. 1 boincer umatlas    723048 Jan 26 21:45 log.48310724._004569.job.log.1
[2026-01-26 21:45:36] -rw-------. 1 boincer umatlas       357 Jan 26 21:45 output.list
[2026-01-26 21:45:36] -rw-r--r--. 1 boincer umatlas       620 Jan 26 21:45 runtime_log
[2026-01-26 21:45:36] -rw-------. 1 boincer umatlas   1095680 Jan 26 21:45 result.tar.gz
[2026-01-26 21:45:36] -rw-r--r--. 1 boincer umatlas      8816 Jan 26 21:45 runtime_log.err
[2026-01-26 21:45:36] -rw-------. 1 boincer umatlas       651 Jan 26 21:45 ncgNDmnw438nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmTW6KDmEa5S4n.diag
[2026-01-26 21:45:36] -rw-r--r--. 1 boincer umatlas     21178 Jan 26 21:45 stderr.txt
[2026-01-26 21:45:36] HITS file was successfully produced:
[2026-01-26 21:45:36] -rw-------. 1 boincer umatlas 181345817 Jan 26 21:44 shared/HITS.pool.root.1
[2026-01-26 21:45:36]  *** Contents of shared directory: ***
[2026-01-26 21:45:36] total 663480
[2026-01-26 21:45:36] -rw-r--r--. 2 boincer umatlas 496338475 Jan 26 20:23 ATLAS.root_0
[2026-01-26 21:45:36] -rw-r--r--. 2 boincer umatlas     15845 Jan 26 20:23 start_atlas.sh
[2026-01-26 21:45:36] -rw-r--r--. 2 boincer umatlas    597765 Jan 26 20:23 input.tar.gz
[2026-01-26 21:45:36] -rw-------. 1 boincer umatlas 181345817 Jan 26 21:44 HITS.pool.root.1
[2026-01-26 21:45:36] -rw-------. 1 boincer umatlas   1095680 Jan 26 21:45 result.tar.gz
21:45:38 (38797): run_atlas exited; CPU time 40508.333713
21:45:38 (38797): called boinc_finish(0)

</stderr_txt>
]]>

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