Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:42:40 (2265706): wrapper (7.7.26015): starting
19:42:40 (2265706): wrapper: running run_atlas (--nthreads 8)
[2026-01-26 19:42:40] Arguments: --nthreads 8
[2026-01-26 19:42:40] Threads: 8
[2026-01-26 19:42:40] Checking for CVMFS
[2026-01-26 19:42:41] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-26 19:42:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-26 19:42:41] Running cvmfs_config stat atlas.cern.ch
[2026-01-26 19:42:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-26 19:42:42] 2.13.3.0 10223 118602 223452 155567 2 852 37899627 40960000 50628 16776704 0 1294025299 99.706 1011157303 50790 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-26 19:42:42] CVMFS is ok
[2026-01-26 19:42:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-26 19:42:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-26 19:42:42] Further information can be found at the LHC@home message board.
[2026-01-26 19:42:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-26 19:42:42] Checking for apptainer binary...
[2026-01-26 19:42:42] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-26 19:42:42] Running /usr/bin/apptainer --version
[2026-01-26 19:42:42] apptainer version 1.4.5-2.el9
[2026-01-26 19:42:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-26 19:42:42] c8-7-6.aglt2.org
[2026-01-26 19:42:42] apptainer works
[2026-01-26 19:42:42] Set ATHENA_PROC_NUMBER=8
[2026-01-26 19:42:42] Set ATHENA_CORE_NUMBER=8
[2026-01-26 19:42:42] Starting ATLAS job with PandaID=6984063018
[2026-01-26 19:42:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-26 21:14:12]  *** The last 200 lines of the pilot log: ***
[2026-01-26 21:14:12]  lfn=log.48317872._003321.job.log.tgz.1
[2026-01-26 21:14:12]  mtime=0
[2026-01-26 21:14:12]  protocol_id=None
[2026-01-26 21:14:12]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-26 21:14:12]  replicas=None
[2026-01-26 21:14:12]  scope=mc23_13p6TeV
[2026-01-26 21:14:12]  status=None
[2026-01-26 21:14:12]  status_code=0
[2026-01-26 21:14:12]  storage_token=
[2026-01-26 21:14:12]  surl=/tmp/boinchome/slots/8/PanDA_Pilot-6984063018/log.48317872._003321.job.log.tgz.1
[2026-01-26 21:14:12]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e1/2e/log.48317872._003321.job.log.tgz.1
[2026-01-26 21:14:12]  workdir=None
[2026-01-26 21:14:12] ]
[2026-01-26 21:14:12] 2026-01-27 02:13:37,439 | INFO     | transferring file log.48317872._003321.job.log.tgz.1 from /tmp/boinchome/slots/8/PanDA_Pilot-6984063018/log.48317872._003321.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-26 21:14:12] 2026-01-27 02:13:37,439 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/8/PanDA_Pilot-6984063018/log.48317872._003321.job.log.tgz.1 /tmp/boinchome/slots/8/log.48317872._003321.job
[2026-01-26 21:14:12] 2026-01-27 02:13:37,554 | INFO     | adding to output.list: log.48317872._003321.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e1/2e/log.48317872._003321.job.log.tg
[2026-01-26 21:14:12] 2026-01-27 02:13:37,557 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-26 21:14:12] 2026-01-27 02:13:37,557 | INFO     | summary of transferred files:
[2026-01-26 21:14:12] 2026-01-27 02:13:37,557 | INFO     |  -- lfn=log.48317872._003321.job.log.tgz.1, status_code=0, status=transferred
[2026-01-26 21:14:12] 2026-01-27 02:13:37,557 | INFO     | stage-out finished correctly
[2026-01-26 21:14:12] 2026-01-27 02:13:38,429 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-26 21:14:12] 2026-01-27 02:13:38,466 | INFO     | time since job start (5395s) is within the limit (349056.0s)
[2026-01-26 21:14:12] 2026-01-27 02:13:38,474 | INFO     | job 6984063018 has state=finished
[2026-01-26 21:14:12] 2026-01-27 02:13:38,474 | INFO     | preparing for final server update for job 6984063018 in state='finished'
[2026-01-26 21:14:12] 2026-01-27 02:13:38,474 | INFO     | reading metadata from: /tmp/boinchome/slots/8/PanDA_Pilot-6984063018/jobReport.json
[2026-01-26 21:14:12] 2026-01-27 02:13:38,475 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/8/workernode_map.json
[2026-01-26 21:14:12] 2026-01-27 02:13:38,476 | INFO     | this job has now completed (state=finished)
[2026-01-26 21:14:12] 2026-01-27 02:13:38,476 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-26 21:14:12] 2026-01-27 02:13:38,476 | INFO     | log transfer has been attempted: DONE
[2026-01-26 21:14:12] 2026-01-27 02:13:38,476 | INFO     | job 6984063018 has finished - writing final server update
[2026-01-26 21:14:12] 2026-01-27 02:13:38,476 | INFO     | total number of processed events: 400 (read)
[2026-01-26 21:14:12] 2026-01-27 02:13:38,492 | INFO     | using path: /tmp/boinchome/slots/8/PanDA_Pilot-6984063018/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 21:14:12] 2026-01-27 02:13:38,492 | INFO     | extracted standard info from prmon json
[2026-01-26 21:14:12] 2026-01-27 02:13:38,492 | INFO     | extracted standard memory fields from prmon json
[2026-01-26 21:14:12] 2026-01-27 02:13:38,493 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-26 21:14:12] 2026-01-27 02:13:38,493 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-26 21:14:12] 2026-01-27 02:13:38,493 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-26 21:14:12] 2026-01-27 02:13:38,494 | INFO     | fitting pss+swap vs Time
[2026-01-26 21:14:12] 2026-01-27 02:13:38,494 | INFO     | sum of square deviations: 164759914.91358048
[2026-01-26 21:14:12] 2026-01-27 02:13:38,494 | INFO     | sum of deviations: -2169620337.5679016
[2026-01-26 21:14:12] 2026-01-27 02:13:38,494 | INFO     | mean x: 1769477406.1604939
[2026-01-26 21:14:12] 2026-01-27 02:13:38,494 | INFO     | mean y: 2528015.1975308643
[2026-01-26 21:14:12] 2026-01-27 02:13:38,494 | INFO     | intersect: 23303669978.559067
[2026-01-26 21:14:12] 2026-01-27 02:13:38,495 | INFO     | chi2: 0.004346321675179422
[2026-01-26 21:14:12] 2026-01-27 02:13:38,495 | INFO     | current memory leak: -13.17 B/s (using 81 data points, chi2=0.00)
[2026-01-26 21:14:12] 2026-01-27 02:13:38,495 | INFO     | could have reported an average CPU frequency of 3799 MHz (6 samples)
[2026-01-26 21:14:12] 2026-01-27 02:13:38,495 | INFO     | ..............................
[2026-01-26 21:14:12] 2026-01-27 02:13:38,495 | INFO     | . Timing measurements:
[2026-01-26 21:14:12] 2026-01-27 02:13:38,495 | INFO     | . get job = 0 s
[2026-01-26 21:14:12] 2026-01-27 02:13:38,495 | INFO     | . initial setup = 19 s
[2026-01-26 21:14:12] 2026-01-27 02:13:38,495 | INFO     | . payload setup = 15 s
[2026-01-26 21:14:12] 2026-01-27 02:13:38,495 | INFO     | . stage-in = 0 s
[2026-01-26 21:14:12] 2026-01-27 02:13:38,495 | INFO     | . payload execution = 5362 s
[2026-01-26 21:14:12] 2026-01-27 02:13:38,495 | INFO     | . stage-out = 1 s
[2026-01-26 21:14:12] 2026-01-27 02:13:38,495 | INFO     | . log creation = 0 s
[2026-01-26 21:14:12] 2026-01-27 02:13:38,495 | INFO     | ..............................
[2026-01-26 21:14:12] 2026-01-27 02:13:38,543 | INFO     | 
[2026-01-26 21:14:12] 2026-01-27 02:13:38,544 | INFO     | job summary report
[2026-01-26 21:14:12] 2026-01-27 02:13:38,544 | INFO     | --------------------------------------------------
[2026-01-26 21:14:12] 2026-01-27 02:13:38,544 | INFO     | PanDA job id: 6984063018
[2026-01-26 21:14:12] 2026-01-27 02:13:38,544 | INFO     | task id: 48317872
[2026-01-26 21:14:12] 2026-01-27 02:13:38,544 | INFO     | errors: (none)
[2026-01-26 21:14:12] 2026-01-27 02:13:38,544 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-26 21:14:12] 2026-01-27 02:13:38,544 | INFO     | pilot state: finished 
[2026-01-26 21:14:12] 2026-01-27 02:13:38,544 | INFO     | transexitcode: 0
[2026-01-26 21:14:12] 2026-01-27 02:13:38,544 | INFO     | exeerrorcode: 0
[2026-01-26 21:14:12] 2026-01-27 02:13:38,544 | INFO     | exeerrordiag: 
[2026-01-26 21:14:12] 2026-01-27 02:13:38,544 | INFO     | exitcode: 0
[2026-01-26 21:14:12] 2026-01-27 02:13:38,544 | INFO     | exitmsg: OK
[2026-01-26 21:14:12] 2026-01-27 02:13:38,544 | INFO     | cpuconsumptiontime: 22308 s
[2026-01-26 21:14:12] 2026-01-27 02:13:38,544 | INFO     | nevents: 400
[2026-01-26 21:14:12] 2026-01-27 02:13:38,544 | INFO     | neventsw: 0
[2026-01-26 21:14:12] 2026-01-27 02:13:38,544 | INFO     | pid: 2292754
[2026-01-26 21:14:12] 2026-01-27 02:13:38,544 | INFO     | pgrp: 2292754
[2026-01-26 21:14:12] 2026-01-27 02:13:38,544 | INFO     | corecount: 8
[2026-01-26 21:14:12] 2026-01-27 02:13:38,544 | INFO     | event service: False
[2026-01-26 21:14:12] 2026-01-27 02:13:38,544 | INFO     | sizes: {0: 2283743, 1: 2284260, 12: 2284260, 5381: 2310762, 5382: 2310761, 5383: 2319815, 5384: 2320193}
[2026-01-26 21:14:12] 2026-01-27 02:13:38,544 | INFO     | --------------------------------------------------
[2026-01-26 21:14:12] 2026-01-27 02:13:38,544 | INFO     | 
[2026-01-26 21:14:12] 2026-01-27 02:13:38,544 | INFO     | executing command: ls -lF /tmp/boinchome/slots/8
[2026-01-26 21:14:12] 2026-01-27 02:13:38,566 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-26 21:14:12] 2026-01-27 02:13:38,566 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-26 21:14:12] 2026-01-27 02:13:38,566 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-26 21:14:12] 2026-01-27 02:13:38,566 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-26 21:14:12] 2026-01-27 02:13:38,566 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-26 21:14:12] 2026-01-27 02:13:38,566 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-26 21:14:12] 2026-01-27 02:13:38,566 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-26 21:14:12] 2026-01-27 02:13:38,566 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-26 21:14:12] 2026-01-27 02:13:38,567 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-26 21:14:12] 2026-01-27 02:13:38,567 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-26 21:14:12] 2026-01-27 02:13:38,567 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-26 21:14:12] 2026-01-27 02:13:38,567 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-26 21:14:12] 2026-01-27 02:13:38,567 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-26 21:14:12] 2026-01-27 02:13:38,567 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-26 21:14:12] 2026-01-27 02:13:38,567 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-26 21:14:12] 2026-01-27 02:13:38,567 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-26 21:14:12] 2026-01-27 02:13:38,567 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-26 21:14:12] 2026-01-27 02:13:38,567 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-26 21:14:12] 2026-01-27 02:13:38,567 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-26 21:14:12] 2026-01-27 02:13:38,567 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-26 21:14:12] 2026-01-27 02:13:38,567 | INFO     | job 6984063018 has completed (purged errors)
[2026-01-26 21:14:12] 2026-01-27 02:13:38,567 | INFO     | overall cleanup function is called
[2026-01-26 21:14:12] 2026-01-27 02:13:39,575 | INFO     | --- collectZombieJob: --- 10, [2292754]
[2026-01-26 21:14:12] 2026-01-27 02:13:39,576 | INFO     | zombie collector waiting for pid 2292754
[2026-01-26 21:14:12] 2026-01-27 02:13:39,576 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-26 21:14:12] 2026-01-27 02:13:39,576 | INFO     | collected zombie processes
[2026-01-26 21:14:12] 2026-01-27 02:13:39,576 | INFO     | will attempt to kill all subprocesses of pid=2292754
[2026-01-26 21:14:12] 2026-01-27 02:13:40,428 | WARNING  | process 2292754 can no longer be monitored (due to stat problems) - aborting
[2026-01-26 21:14:12] 2026-01-27 02:13:40,713 | INFO     | process IDs to be killed: [2292754] (in reverse order)
[2026-01-26 21:14:12] 2026-01-27 02:13:41,001 | WARNING  | found no corresponding commands to process id(s)
[2026-01-26 21:14:12] 2026-01-27 02:13:41,001 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-26 21:14:12] 2026-01-27 02:13:41,051 | INFO     | using path: /tmp/boinchome/slots/8/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 21:14:12] 2026-01-27 02:13:41,051 | INFO     | using path: /tmp/boinchome/slots/8/memory_monitor_summary.json (trf name=prmon)
[2026-01-26 21:14:12] 2026-01-27 02:13:41,051 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-01-26 21:14:12] 2026-01-27 02:13:41,051 | WARNING  | maxPSS not found in memory monitor output
[2026-01-26 21:14:12] 2026-01-27 02:13:41,062 | INFO     | did not find any defunct processes belonging to 2292754
[2026-01-26 21:14:12] 2026-01-27 02:13:41,106 | INFO     | did not find any defunct processes belonging to 2292754
[2026-01-26 21:14:12] 2026-01-27 02:13:41,107 | INFO     | ready for new job
[2026-01-26 21:14:12] 2026-01-27 02:13:41,107 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-26 21:14:12] 2026-01-27 02:13:41,108 | INFO     | **************************************
[2026-01-26 21:14:12] 2026-01-27 02:13:41,108 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-26 21:14:12] 2026-01-27 02:13:41,108 | INFO     | **************************************
[2026-01-26 21:14:12] 2026-01-27 02:13:41,108 | INFO     | 
[2026-01-26 21:14:12] 2026-01-27 02:13:41,132 | INFO     | architecture information:
[2026-01-26 21:14:12] 2026-01-27 02:13:41,132 | INFO     | executing command: cat /etc/os-release
[2026-01-26 21:14:12] 2026-01-27 02:13:41,154 | INFO     | cat /etc/os-release:
[2026-01-26 21:14:12] NAME="CentOS Linux"
[2026-01-26 21:14:12] VERSION="7 (Core)"
[2026-01-26 21:14:12] ID="centos"
[2026-01-26 21:14:12] ID_LIKE="rhel fedora"
[2026-01-26 21:14:12] VERSION_ID="7"
[2026-01-26 21:14:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-26 21:14:12] ANSI_COLOR="0;31"
[2026-01-26 21:14:12] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-26 21:14:12] HOME_URL="https://www.centos.org/"
[2026-01-26 21:14:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-26 21:14:12] 
[2026-01-26 21:14:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-26 21:14:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-26 21:14:12] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-26 21:14:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-26 21:14:12] 
[2026-01-26 21:14:12] 2026-01-27 02:13:41,158 | INFO     | **************************************
[2026-01-26 21:14:12] 2026-01-27 02:13:41,668 | INFO     | executing command: df -mP /tmp/boinchome/slots/8
[2026-01-26 21:14:12] 2026-01-27 02:13:41,692 | INFO     | sufficient remaining disk space (165240897536 B)
[2026-01-26 21:14:12] 2026-01-27 02:13:41,692 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-26 21:14:12] 2026-01-27 02:13:41,692 | INFO     | current server update state: UPDATING_FINAL
[2026-01-26 21:14:12] 2026-01-27 02:13:41,692 | INFO     | update_server=False
[2026-01-26 21:14:12] 2026-01-27 02:13:41,692 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-26 21:14:12] 2026-01-27 02:13:41,750 | INFO     | number of running child processes to parent process 2292754: 1
[2026-01-26 21:14:12] 2026-01-27 02:13:41,750 | INFO     | maximum number of monitored processes: 6
[2026-01-26 21:14:12] 2026-01-27 02:13:41,750 | INFO     | aborting job monitoring since job object (job id=6984063018) has expired
[2026-01-26 21:14:12] 2026-01-27 02:13:41,750 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-26 21:14:12] 2026-01-27 02:13:41,750 | INFO     | will abort loop
[2026-01-26 21:14:12] 2026-01-27 02:13:41,836 | INFO     | all payload control threads have been joined
[2026-01-26 21:14:12] 2026-01-27 02:13:42,018 | INFO     | all data control threads have been joined
[2026-01-26 21:14:12] 2026-01-27 02:13:42,702 | INFO     | [job] retrieve thread has finished
[2026-01-26 21:14:12] 2026-01-27 02:13:42,769 | INFO     | [job] job monitor thread has finished
[2026-01-26 21:14:12] 2026-01-27 02:13:42,843 | INFO     | [payload] control thread has finished
[2026-01-26 21:14:12] 2026-01-27 02:13:42,891 | INFO     | [payload] validate_pre thread has finished
[2026-01-26 21:14:12] 2026-01-27 02:13:42,934 | INFO     | [data] copytool_in thread has finished
[2026-01-26 21:14:12] 2026-01-27 02:13:43,024 | INFO     | [data] control thread has finished
[2026-01-26 21:14:12] 2026-01-27 02:13:43,047 | INFO     | [payload] execute_payloads thread has finished
[2026-01-26 21:14:12] 2026-01-27 02:13:43,089 | INFO     | all job control threads have been joined
[2026-01-26 21:14:12] 2026-01-27 02:13:43,133 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-26 21:14:12] 2026-01-27 02:13:43,277 | INFO     | [job] validate thread has finished
[2026-01-26 21:14:12] 2026-01-27 02:13:43,348 | INFO     | [job] create_data_payload thread has finished
[2026-01-26 21:14:12] 2026-01-27 02:13:43,565 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-26 21:14:12] 2026-01-27 02:13:44,002 | INFO     | [payload] validate_post thread has finished
[2026-01-26 21:14:12] 2026-01-27 02:13:44,006 | INFO     | [payload] failed_post thread has finished
[2026-01-26 21:14:12] 2026-01-27 02:13:44,094 | INFO     | [job] control thread has finished
[2026-01-26 21:14:12] 2026-01-27 02:13:44,497 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-26 21:14:12] 2026-01-27 02:13:44,571 | INFO     | [job] queue monitor thread has finished
[2026-01-26 21:14:12] 2026-01-27 02:13:45,143 | INFO     | [data] copytool_out thread has finished
[2026-01-26 21:14:12] 2026-01-27 02:13:48,509 | INFO     | [data] queue_monitor thread has finished
[2026-01-26 21:14:12] 2026-01-27 02:13:51,763 | INFO     | job.realtimelogging is not enabled
[2026-01-26 21:14:12] 2026-01-27 02:13:51,950 | INFO     | [monitor] cgroup control has ended
[2026-01-26 21:14:12] 2026-01-27 02:13:52,769 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-26 21:14:12] 2026-01-27 02:13:54,004 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140490420967232)>', '<ExcThread(monitor, started 140490147383040)>']
[2026-01-26 21:14:12] 2026-01-27 02:13:59,030 | INFO     | all workflow threads have been joined
[2026-01-26 21:14:12] 2026-01-27 02:13:59,031 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-26 21:14:12] 2026-01-27 02:13:59,032 | INFO     | traces error code: 0
[2026-01-26 21:14:12] 2026-01-27 02:13:59,032 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-26 21:14:12] 2026-01-27 02:14:12,189 | INFO     | PID=2275332 has CPU usage=8.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-26 21:14:12] 2026-01-27 02:14:12,190 | INFO     | .. there are 63 such processes running
[2026-01-26 21:14:12] 2026-01-27 02:14:12,190 | INFO     | found 0 job(s) in 20 queues
[2026-01-26 21:14:12] 2026-01-27 02:14:12,190 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-26 21:14:12] 2026-01-27 02:14:12,190 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-26 21:14:12] 2026-01-27 02:14:12,190 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-26 21:14:12] 2026-01-27 02:14:12,190 | INFO     | [monitor] control thread has ended
[2026-01-26 21:14:12] 2026-01-27 02:14:12,318 [wrapper] ==== pilot stdout END ====
[2026-01-26 21:14:12] 2026-01-27 02:14:12,321 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-26 21:14:12] 2026-01-27 02:14:12,325 [wrapper] pilotpid: 2275332
[2026-01-26 21:14:12] 2026-01-27 02:14:12,330 [wrapper] Pilot exit status: 0
[2026-01-26 21:14:12] 2026-01-27 02:14:12,349 [wrapper] pandaids: 6984063018
[2026-01-26 21:14:12] 2026-01-27 02:14:12,484 [wrapper] cleanup supervisor_pilot 3177569 2275333
[2026-01-26 21:14:12] 2026-01-27 02:14:12,487 [wrapper] Test setup, not cleaning
[2026-01-26 21:14:12] 2026-01-27 02:14:12,490 [wrapper] apfmon messages muted
[2026-01-26 21:14:12] 2026-01-27 02:14:12,492 [wrapper] ==== wrapper stdout END ====
[2026-01-26 21:14:12] 2026-01-27 02:14:12,495 [wrapper] ==== wrapper stderr END ====
[2026-01-26 21:14:12]  *** Error codes and diagnostics ***
[2026-01-26 21:14:12]     "exeErrorCode": 0,
[2026-01-26 21:14:12]     "exeErrorDiag": "",
[2026-01-26 21:14:12]     "pilotErrorCode": 0,
[2026-01-26 21:14:12]     "pilotErrorDiag": "",
[2026-01-26 21:14:12]  *** Listing of results directory ***
[2026-01-26 21:14:12] total 672968
[2026-01-26 21:14:12] -rw-r--r--. 1 boincer umatlas    584422 Jan 26 02:37 pilot3.tar.gz
[2026-01-26 21:14:12] -rw-r--r--. 1 boincer umatlas      5111 Jan 26 02:38 queuedata.json
[2026-01-26 21:14:12] -rwx------. 1 boincer umatlas     36322 Jan 26 02:39 runpilot2-wrapper.sh
[2026-01-26 21:14:12] -rw-r--r--. 1 boincer umatlas       100 Jan 26 19:42 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-26 21:14:12] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 26 19:42 run_atlas
[2026-01-26 21:14:12] -rw-r--r--. 1 boincer umatlas       105 Jan 26 19:42 job.xml
[2026-01-26 21:14:12] -rw-r--r--. 2 boincer umatlas 500107525 Jan 26 19:42 EVNT.48317869._000067.pool.root.1
[2026-01-26 21:14:12] -rw-r--r--. 2 boincer umatlas     15845 Jan 26 19:42 start_atlas.sh
[2026-01-26 21:14:12] drwxrwx--x. 2 boincer umatlas      4096 Jan 26 19:42 shared
[2026-01-26 21:14:12] -rw-r--r--. 2 boincer umatlas    597753 Jan 26 19:42 input.tar.gz
[2026-01-26 21:14:12] -rw-r--r--. 1 boincer umatlas         0 Jan 26 19:42 boinc_lockfile
[2026-01-26 21:14:12] -rw-r--r--. 1 boincer umatlas      2514 Jan 26 19:42 pandaJob.out
[2026-01-26 21:14:12] -rw-------. 1 boincer umatlas        57 Jan 26 19:42 setup.sh.local
[2026-01-26 21:14:12] -rw-------. 1 boincer umatlas   1006441 Jan 26 19:43 agis_schedconf.cvmfs.json
[2026-01-26 21:14:12] -rw-------. 1 boincer umatlas   1516246 Jan 26 19:43 agis_ddmendpoints.agis.ALL.json
[2026-01-26 21:14:12] -rw-------. 1 boincer umatlas       430 Jan 26 19:43 workernode_map.json
[2026-01-26 21:14:12] drwx------. 5 boincer umatlas      4096 Jan 26 19:43 pilot3
[2026-01-26 21:14:12] -rw-r--r--. 1 boincer umatlas      7171 Jan 26 21:12 init_data.xml
[2026-01-26 21:14:12] -rw-------. 1 boincer umatlas 182996762 Jan 26 21:12 HITS.48317872._003321.pool.root.1
[2026-01-26 21:14:12] -rw-r--r--. 1 boincer umatlas       531 Jan 26 21:12 boinc_task_state.xml
[2026-01-26 21:14:12] -rw-------. 1 boincer umatlas      1048 Jan 26 21:13 memory_monitor_summary.json
[2026-01-26 21:14:12] -rw-------. 1 boincer umatlas    321966 Jan 26 21:13 log.48317872._003321.job.log.tgz.1
[2026-01-26 21:14:12] -rw-------. 1 boincer umatlas      6356 Jan 26 21:13 heartbeat.json
[2026-01-26 21:14:12] -rw-r--r--. 1 boincer umatlas      8192 Jan 26 21:13 boinc_mmap_file
[2026-01-26 21:14:12] -rw-r--r--. 1 boincer umatlas        27 Jan 26 21:14 wrapper_checkpoint.txt
[2026-01-26 21:14:12] -rw-------. 1 boincer umatlas       823 Jan 26 21:14 pilotlog.txt
[2026-01-26 21:14:12] -rw-------. 1 boincer umatlas        95 Jan 26 21:14 pilot_heartbeat.json
[2026-01-26 21:14:12] -rw-------. 1 boincer umatlas    713561 Jan 26 21:14 log.48317872._003321.job.log.1
[2026-01-26 21:14:12] -rw-------. 1 boincer umatlas       357 Jan 26 21:14 output.list
[2026-01-26 21:14:12] -rw-r--r--. 1 boincer umatlas       620 Jan 26 21:14 runtime_log
[2026-01-26 21:14:12] -rw-------. 1 boincer umatlas   1054720 Jan 26 21:14 result.tar.gz
[2026-01-26 21:14:12] -rw-r--r--. 1 boincer umatlas      9331 Jan 26 21:14 runtime_log.err
[2026-01-26 21:14:12] -rw-------. 1 boincer umatlas       655 Jan 26 21:14 096NDmqMW48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmXn2KDmEo20Sm.diag
[2026-01-26 21:14:12] -rw-r--r--. 1 boincer umatlas     21696 Jan 26 21:14 stderr.txt
[2026-01-26 21:14:12] HITS file was successfully produced:
[2026-01-26 21:14:12] -rw-------. 1 boincer umatlas 182996762 Jan 26 21:12 shared/HITS.pool.root.1
[2026-01-26 21:14:12]  *** Contents of shared directory: ***
[2026-01-26 21:14:12] total 668736
[2026-01-26 21:14:12] -rw-r--r--. 2 boincer umatlas 500107525 Jan 26 19:42 ATLAS.root_0
[2026-01-26 21:14:12] -rw-r--r--. 2 boincer umatlas     15845 Jan 26 19:42 start_atlas.sh
[2026-01-26 21:14:12] -rw-r--r--. 2 boincer umatlas    597753 Jan 26 19:42 input.tar.gz
[2026-01-26 21:14:12] -rw-------. 1 boincer umatlas 182996762 Jan 26 21:12 HITS.pool.root.1
[2026-01-26 21:14:12] -rw-------. 1 boincer umatlas   1054720 Jan 26 21:14 result.tar.gz
21:14:14 (2265706): run_atlas exited; CPU time 22505.214122
21:14:14 (2265706): called boinc_finish(0)

</stderr_txt>
]]>

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