Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:42:01 (885272): wrapper (7.7.26015): starting
09:42:01 (885272): wrapper: running run_atlas (--nthreads 6)
[2026-01-28 09:42:01] Arguments: --nthreads 6
[2026-01-28 09:42:01] Threads: 6
[2026-01-28 09:42:01] Checking for CVMFS
[2026-01-28 09:42:01] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-28 09:42:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-28 09:42:20] Running cvmfs_config stat atlas.cern.ch
[2026-01-28 09:42:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-28 09:42:21] 2.13.3.0 871602 58 48528 155605 0 11 26487900 52428801 929 130560 0 43956 99.970 1777 11 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2026-01-28 09:42:21] CVMFS is ok
[2026-01-28 09:42:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-28 09:42:21] Checking for apptainer binary...
[2026-01-28 09:42:21] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-28 09:42:21] Running /usr/bin/apptainer --version
[2026-01-28 09:42:21] apptainer version 1.4.5-2.el9
[2026-01-28 09:42:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-28 09:42:21] testio002
[2026-01-28 09:42:21] apptainer works
[2026-01-28 09:42:21] Set ATHENA_PROC_NUMBER=6
[2026-01-28 09:42:21] Set ATHENA_CORE_NUMBER=6
[2026-01-28 09:42:21] Starting ATLAS job with PandaID=6983466456
[2026-01-28 09:42:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-28 10:57:46]  *** The last 200 lines of the pilot log: ***
[2026-01-28 10:57:46]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-01-28 10:57:46]  is_altstaged=None
[2026-01-28 10:57:46]  is_tar=False
[2026-01-28 10:57:46]  lfn=log.48329469._000075.job.log.tgz.1
[2026-01-28 10:57:46]  mtime=0
[2026-01-28 10:57:46]  protocol_id=None
[2026-01-28 10:57:46]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-28 10:57:46]  replicas=None
[2026-01-28 10:57:46]  scope=mc23_13p6TeV
[2026-01-28 10:57:46]  status=None
[2026-01-28 10:57:46]  status_code=0
[2026-01-28 10:57:46]  storage_token=
[2026-01-28 10:57:46]  surl=/var/lib/boinc/slots/7/PanDA_Pilot-6983466456/log.48329469._000075.job.log.tgz.1
[2026-01-28 10:57:46]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/56/c3/log.48329469._000075.job.log.tgz.1
[2026-01-28 10:57:46]  workdir=None
[2026-01-28 10:57:46] ]
[2026-01-28 10:57:46] 2026-01-28 01:56:49,370 | INFO     | transferring file log.48329469._000075.job.log.tgz.1 from /var/lib/boinc/slots/7/PanDA_Pilot-6983466456/log.48329469._000075.job.log.tgz.1 to /var/lib/boinc/slots/
[2026-01-28 10:57:46] 2026-01-28 01:56:49,370 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/7/PanDA_Pilot-6983466456/log.48329469._000075.job.log.tgz.1 /var/lib/boinc/slots/7/log.48329469._000075.job
[2026-01-28 10:57:46] 2026-01-28 01:56:49,378 | INFO     | adding to output.list: log.48329469._000075.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/56/c3/log.48329469._000075.job.log.tg
[2026-01-28 10:57:46] 2026-01-28 01:56:49,379 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-28 10:57:46] 2026-01-28 01:56:49,379 | INFO     | summary of transferred files:
[2026-01-28 10:57:46] 2026-01-28 01:56:49,379 | INFO     |  -- lfn=log.48329469._000075.job.log.tgz.1, status_code=0, status=transferred
[2026-01-28 10:57:46] 2026-01-28 01:56:49,379 | INFO     | stage-out finished correctly
[2026-01-28 10:57:46] 2026-01-28 01:56:49,608 | INFO     | time since job start (4396s) is within the limit (349056.0s)
[2026-01-28 10:57:46] 2026-01-28 01:56:49,869 | INFO     | monitor loop #340: job 0:6983466456 is in state 'finished'
[2026-01-28 10:57:46] 2026-01-28 01:56:49,869 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-28 10:57:46] 2026-01-28 01:56:51,614 | INFO     | time since job start (4398s) is within the limit (349056.0s)
[2026-01-28 10:57:46] 2026-01-28 01:56:52,372 | INFO     | monitor loop #341: job 0:6983466456 is in state 'finished'
[2026-01-28 10:57:46] 2026-01-28 01:56:52,373 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-28 10:57:46] 2026-01-28 01:56:52,425 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-28 10:57:46] 2026-01-28 01:56:52,470 | INFO     | job 6983466456 has state=finished
[2026-01-28 10:57:46] 2026-01-28 01:56:52,470 | INFO     | preparing for final server update for job 6983466456 in state='finished'
[2026-01-28 10:57:46] 2026-01-28 01:56:52,470 | INFO     | reading metadata from: /var/lib/boinc/slots/7/PanDA_Pilot-6983466456/jobReport.json
[2026-01-28 10:57:46] 2026-01-28 01:56:52,471 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/7/workernode_map.json
[2026-01-28 10:57:46] 2026-01-28 01:56:52,471 | INFO     | this job has now completed (state=finished)
[2026-01-28 10:57:46] 2026-01-28 01:56:52,471 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-28 10:57:46] 2026-01-28 01:56:52,471 | INFO     | log transfer has been attempted: DONE
[2026-01-28 10:57:46] 2026-01-28 01:56:52,471 | INFO     | job 6983466456 has finished - writing final server update
[2026-01-28 10:57:46] 2026-01-28 01:56:52,472 | INFO     | total number of processed events: 400 (read)
[2026-01-28 10:57:46] 2026-01-28 01:56:52,473 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6983466456/memory_monitor_summary.json (trf name=prmon)
[2026-01-28 10:57:46] 2026-01-28 01:56:52,473 | INFO     | extracted standard info from prmon json
[2026-01-28 10:57:46] 2026-01-28 01:56:52,473 | INFO     | extracted standard memory fields from prmon json
[2026-01-28 10:57:46] 2026-01-28 01:56:52,473 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-28 10:57:46] 2026-01-28 01:56:52,474 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-28 10:57:46] 2026-01-28 01:56:52,474 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-28 10:57:46] 2026-01-28 01:56:52,474 | INFO     | fitting pss+swap vs Time
[2026-01-28 10:57:46] 2026-01-28 01:56:52,474 | INFO     | sum of square deviations: 85136480.0
[2026-01-28 10:57:46] 2026-01-28 01:56:52,475 | INFO     | sum of deviations: -5551429867.000001
[2026-01-28 10:57:46] 2026-01-28 01:56:52,475 | INFO     | mean x: 1769563292.0
[2026-01-28 10:57:46] 2026-01-28 01:56:52,475 | INFO     | mean y: 2527658.3076923075
[2026-01-28 10:57:46] 2026-01-28 01:56:52,475 | INFO     | intersect: 115389098852.64934
[2026-01-28 10:57:46] 2026-01-28 01:56:52,475 | INFO     | chi2: 0.09752021851709058
[2026-01-28 10:57:46] 2026-01-28 01:56:52,475 | INFO     | current memory leak: -65.21 B/s (using 65 data points, chi2=0.10)
[2026-01-28 10:57:46] 2026-01-28 01:56:52,475 | INFO     | could have reported an average CPU frequency of 4400 MHz (6 samples)
[2026-01-28 10:57:46] 2026-01-28 01:56:52,475 | INFO     | ..............................
[2026-01-28 10:57:46] 2026-01-28 01:56:52,475 | INFO     | . Timing measurements:
[2026-01-28 10:57:46] 2026-01-28 01:56:52,475 | INFO     | . get job = 0 s
[2026-01-28 10:57:46] 2026-01-28 01:56:52,475 | INFO     | . initial setup = 10 s
[2026-01-28 10:57:46] 2026-01-28 01:56:52,475 | INFO     | . payload setup = 7 s
[2026-01-28 10:57:46] 2026-01-28 01:56:52,475 | INFO     | . stage-in = 0 s
[2026-01-28 10:57:46] 2026-01-28 01:56:52,475 | INFO     | . payload execution = 4372 s
[2026-01-28 10:57:46] 2026-01-28 01:56:52,475 | INFO     | . stage-out = 0 s
[2026-01-28 10:57:46] 2026-01-28 01:56:52,475 | INFO     | . log creation = 0 s
[2026-01-28 10:57:46] 2026-01-28 01:56:52,475 | INFO     | ..............................
[2026-01-28 10:57:46] 2026-01-28 01:56:52,520 | INFO     | 
[2026-01-28 10:57:46] 2026-01-28 01:56:52,520 | INFO     | job summary report
[2026-01-28 10:57:46] 2026-01-28 01:56:52,520 | INFO     | --------------------------------------------------
[2026-01-28 10:57:46] 2026-01-28 01:56:52,520 | INFO     | PanDA job id: 6983466456
[2026-01-28 10:57:46] 2026-01-28 01:56:52,520 | INFO     | task id: 48329469
[2026-01-28 10:57:46] 2026-01-28 01:56:52,520 | INFO     | errors: (none)
[2026-01-28 10:57:46] 2026-01-28 01:56:52,520 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-28 10:57:46] 2026-01-28 01:56:52,520 | INFO     | pilot state: finished 
[2026-01-28 10:57:46] 2026-01-28 01:56:52,520 | INFO     | transexitcode: 0
[2026-01-28 10:57:46] 2026-01-28 01:56:52,520 | INFO     | exeerrorcode: 0
[2026-01-28 10:57:46] 2026-01-28 01:56:52,521 | INFO     | exeerrordiag: 
[2026-01-28 10:57:46] 2026-01-28 01:56:52,521 | INFO     | exitcode: 0
[2026-01-28 10:57:46] 2026-01-28 01:56:52,521 | INFO     | exitmsg: OK
[2026-01-28 10:57:46] 2026-01-28 01:56:52,521 | INFO     | cpuconsumptiontime: 24803 s
[2026-01-28 10:57:46] 2026-01-28 01:56:52,521 | INFO     | nevents: 400
[2026-01-28 10:57:46] 2026-01-28 01:56:52,521 | INFO     | neventsw: 0
[2026-01-28 10:57:46] 2026-01-28 01:56:52,521 | INFO     | pid: 894000
[2026-01-28 10:57:46] 2026-01-28 01:56:52,521 | INFO     | pgrp: 894000
[2026-01-28 10:57:46] 2026-01-28 01:56:52,521 | INFO     | corecount: 6
[2026-01-28 10:57:46] 2026-01-28 01:56:52,521 | INFO     | event service: False
[2026-01-28 10:57:46] 2026-01-28 01:56:52,521 | INFO     | sizes: {0: 2283269, 1: 2284387, 11: 2284387, 4384: 2310571, 4385: 2319624, 4388: 2319946}
[2026-01-28 10:57:46] 2026-01-28 01:56:52,521 | INFO     | --------------------------------------------------
[2026-01-28 10:57:46] 2026-01-28 01:56:52,521 | INFO     | 
[2026-01-28 10:57:46] 2026-01-28 01:56:52,521 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-01-28 10:57:46] 2026-01-28 01:56:52,529 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-28 10:57:46] 2026-01-28 01:56:52,529 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-28 10:57:46] 2026-01-28 01:56:52,530 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-28 10:57:46] 2026-01-28 01:56:52,530 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-28 10:57:46] 2026-01-28 01:56:52,530 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-28 10:57:46] 2026-01-28 01:56:52,530 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-28 10:57:46] 2026-01-28 01:56:52,530 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-28 10:57:46] 2026-01-28 01:56:52,530 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-28 10:57:46] 2026-01-28 01:56:52,530 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-28 10:57:46] 2026-01-28 01:56:52,530 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-28 10:57:46] 2026-01-28 01:56:52,530 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-28 10:57:46] 2026-01-28 01:56:52,530 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-28 10:57:46] 2026-01-28 01:56:52,530 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-28 10:57:46] 2026-01-28 01:56:52,530 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-28 10:57:46] 2026-01-28 01:56:52,530 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-28 10:57:46] 2026-01-28 01:56:52,530 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-28 10:57:46] 2026-01-28 01:56:52,530 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-28 10:57:46] 2026-01-28 01:56:52,530 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-28 10:57:46] 2026-01-28 01:56:52,530 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-28 10:57:46] 2026-01-28 01:56:52,530 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-28 10:57:46] 2026-01-28 01:56:52,530 | INFO     | job 6983466456 has completed (purged errors)
[2026-01-28 10:57:46] 2026-01-28 01:56:52,531 | INFO     | overall cleanup function is called
[2026-01-28 10:57:46] 2026-01-28 01:56:53,536 | INFO     | --- collectZombieJob: --- 10, [894000]
[2026-01-28 10:57:46] 2026-01-28 01:56:53,537 | INFO     | zombie collector waiting for pid 894000
[2026-01-28 10:57:46] 2026-01-28 01:56:53,537 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-28 10:57:46] 2026-01-28 01:56:53,537 | INFO     | collected zombie processes
[2026-01-28 10:57:46] 2026-01-28 01:56:53,537 | INFO     | will attempt to kill all subprocesses of pid=894000
[2026-01-28 10:57:46] 2026-01-28 01:56:53,586 | INFO     | process IDs to be killed: [894000] (in reverse order)
[2026-01-28 10:57:46] 2026-01-28 01:56:53,605 | WARNING  | found no corresponding commands to process id(s)
[2026-01-28 10:57:46] 2026-01-28 01:56:53,606 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-28 10:57:46] 2026-01-28 01:56:53,607 | INFO     | did not find any defunct processes belonging to 894000
[2026-01-28 10:57:46] 2026-01-28 01:56:53,608 | INFO     | did not find any defunct processes belonging to 894000
[2026-01-28 10:57:46] 2026-01-28 01:56:53,609 | INFO     | ready for new job
[2026-01-28 10:57:46] 2026-01-28 01:56:53,609 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-28 10:57:46] 2026-01-28 01:56:53,609 | INFO     | **************************************
[2026-01-28 10:57:46] 2026-01-28 01:56:53,609 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-28 10:57:46] 2026-01-28 01:56:53,610 | INFO     | **************************************
[2026-01-28 10:57:46] 2026-01-28 01:56:53,610 | INFO     | 
[2026-01-28 10:57:46] 2026-01-28 01:56:53,610 | INFO     | architecture information:
[2026-01-28 10:57:46] 2026-01-28 01:56:53,610 | INFO     | executing command: cat /etc/os-release
[2026-01-28 10:57:46] 2026-01-28 01:56:53,617 | INFO     | cat /etc/os-release:
[2026-01-28 10:57:46] NAME="CentOS Linux"
[2026-01-28 10:57:46] VERSION="7 (Core)"
[2026-01-28 10:57:46] ID="centos"
[2026-01-28 10:57:46] ID_LIKE="rhel fedora"
[2026-01-28 10:57:46] VERSION_ID="7"
[2026-01-28 10:57:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-28 10:57:46] ANSI_COLOR="0;31"
[2026-01-28 10:57:46] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-28 10:57:46] HOME_URL="https://www.centos.org/"
[2026-01-28 10:57:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-28 10:57:46] 
[2026-01-28 10:57:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-28 10:57:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-28 10:57:46] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-28 10:57:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-28 10:57:46] 
[2026-01-28 10:57:46] 2026-01-28 01:56:53,617 | INFO     | **************************************
[2026-01-28 10:57:46] 2026-01-28 01:56:54,119 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-01-28 10:57:46] 2026-01-28 01:56:54,126 | INFO     | sufficient remaining disk space (315518615552 B)
[2026-01-28 10:57:46] 2026-01-28 01:56:54,126 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-28 10:57:46] 2026-01-28 01:56:54,126 | INFO     | current server update state: UPDATING_FINAL
[2026-01-28 10:57:46] 2026-01-28 01:56:54,126 | INFO     | update_server=False
[2026-01-28 10:57:46] 2026-01-28 01:56:54,126 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-28 10:57:46] 2026-01-28 01:56:54,126 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-28 10:57:46] 2026-01-28 01:56:54,126 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-28 10:57:46] 2026-01-28 01:56:54,126 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-28 10:57:46] 2026-01-28 01:56:54,126 | INFO     | aborting loop
[2026-01-28 10:57:46] 2026-01-28 01:56:54,327 | INFO     | all data control threads have been joined
[2026-01-28 10:57:46] 2026-01-28 01:56:54,421 | INFO     | all payload control threads have been joined
[2026-01-28 10:57:46] 2026-01-28 01:56:54,824 | INFO     | all job control threads have been joined
[2026-01-28 10:57:46] 2026-01-28 01:56:54,944 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-28 10:57:46] 2026-01-28 01:56:55,020 | INFO     | job.realtimelogging is not enabled
[2026-01-28 10:57:46] 2026-01-28 01:56:55,131 | INFO     | [job] retrieve thread has finished
[2026-01-28 10:57:46] 2026-01-28 01:56:55,132 | INFO     | [job] queue monitor thread has finished
[2026-01-28 10:57:46] 2026-01-28 01:56:55,132 | INFO     | [job] job monitor thread has finished
[2026-01-28 10:57:46] 2026-01-28 01:56:55,175 | INFO     | [data] copytool_in thread has finished
[2026-01-28 10:57:46] 2026-01-28 01:56:55,332 | INFO     | [data] control thread has finished
[2026-01-28 10:57:46] 2026-01-28 01:56:55,427 | INFO     | [payload] control thread has finished
[2026-01-28 10:57:46] 2026-01-28 01:56:55,698 | INFO     | [payload] execute_payloads thread has finished
[2026-01-28 10:57:46] 2026-01-28 01:56:55,826 | INFO     | [job] control thread has finished
[2026-01-28 10:57:46] 2026-01-28 01:56:56,021 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-28 10:57:46] 2026-01-28 01:56:56,101 | INFO     | [job] validate thread has finished
[2026-01-28 10:57:46] 2026-01-28 01:56:56,101 | INFO     | [payload] failed_post thread has finished
[2026-01-28 10:57:46] 2026-01-28 01:56:56,201 | INFO     | [payload] validate_pre thread has finished
[2026-01-28 10:57:46] 2026-01-28 01:56:56,274 | INFO     | [job] create_data_payload thread has finished
[2026-01-28 10:57:46] 2026-01-28 01:56:56,411 | INFO     | [payload] validate_post thread has finished
[2026-01-28 10:57:46] 2026-01-28 01:56:56,949 | INFO     | [data] copytool_out thread has finished
[2026-01-28 10:57:46] 2026-01-28 01:56:58,132 | INFO     | [data] queue_monitor thread has finished
[2026-01-28 10:57:46] 2026-01-28 01:57:24,736 | INFO     | PID=889385 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-28 10:57:46] 2026-01-28 01:57:24,736 | INFO     | .. there are 2 such processes running
[2026-01-28 10:57:46] 2026-01-28 01:57:24,737 | INFO     | found 0 job(s) in 20 queues
[2026-01-28 10:57:46] 2026-01-28 01:57:24,737 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-28 10:57:46] 2026-01-28 01:57:24,737 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-28 10:57:46] 2026-01-28 01:57:40,523 | INFO     | [monitor] cgroup control has ended
[2026-01-28 10:57:46] 2026-01-28 01:57:41,544 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139974238816064)>', '<ExcThread(monitor, started 139973873342208)>']
[2026-01-28 10:57:46] 2026-01-28 01:57:41,819 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-28 10:57:46] 2026-01-28 01:57:41,819 | INFO     | [monitor] control thread has ended
[2026-01-28 10:57:46] 2026-01-28 01:57:46,569 | INFO     | all workflow threads have been joined
[2026-01-28 10:57:46] 2026-01-28 01:57:46,570 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-28 10:57:46] 2026-01-28 01:57:46,570 | INFO     | traces error code: 0
[2026-01-28 10:57:46] 2026-01-28 01:57:46,570 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-28 10:57:46] 2026-01-28 01:57:46,628 [wrapper] ==== pilot stdout END ====
[2026-01-28 10:57:46] 2026-01-28 01:57:46,629 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-28 10:57:46] 2026-01-28 01:57:46,630 [wrapper] pilotpid: 889385
[2026-01-28 10:57:46] 2026-01-28 01:57:46,631 [wrapper] Pilot exit status: 0
[2026-01-28 10:57:46] 2026-01-28 01:57:46,635 [wrapper] pandaids: 6983466456
[2026-01-28 10:57:46] 2026-01-28 01:57:46,646 [wrapper] cleanup supervisor_pilot  912308 889386
[2026-01-28 10:57:46] 2026-01-28 01:57:46,647 [wrapper] Test setup, not cleaning
[2026-01-28 10:57:46] 2026-01-28 01:57:46,648 [wrapper] apfmon messages muted
[2026-01-28 10:57:46] 2026-01-28 01:57:46,649 [wrapper] ==== wrapper stdout END ====
[2026-01-28 10:57:46] 2026-01-28 01:57:46,650 [wrapper] ==== wrapper stderr END ====
[2026-01-28 10:57:46]  *** Error codes and diagnostics ***
[2026-01-28 10:57:46]     "exeErrorCode": 0,
[2026-01-28 10:57:46]     "exeErrorDiag": "",
[2026-01-28 10:57:46]     "pilotErrorCode": 0,
[2026-01-28 10:57:46]     "pilotErrorDiag": "",
[2026-01-28 10:57:46]  *** Listing of results directory ***
[2026-01-28 10:57:46] total 447492
[2026-01-28 10:57:46] -rwx------. 1 boinc boinc     36322 Jan 26 07:58 runpilot2-wrapper.sh
[2026-01-28 10:57:46] -rw-r--r--. 1 boinc boinc      5111 Jan 26 07:58 queuedata.json
[2026-01-28 10:57:46] -rw-r--r--. 1 boinc boinc    584422 Jan 26 08:00 pilot3.tar.gz
[2026-01-28 10:57:46] -rw-r--r--. 1 boinc boinc       100 Jan 28 09:42 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-28 10:57:46] -rwxr-xr-x. 1 boinc boinc      7986 Jan 28 09:42 run_atlas
[2026-01-28 10:57:46] -rw-r--r--. 1 boinc boinc       105 Jan 28 09:42 job.xml
[2026-01-28 10:57:46] -rw-r--r--. 2 boinc boinc     15845 Jan 28 09:42 start_atlas.sh
[2026-01-28 10:57:46] drwxrwx--x. 2 boinc boinc        68 Jan 28 09:42 shared
[2026-01-28 10:57:46] -rw-r--r--. 2 boinc boinc    597770 Jan 28 09:42 input.tar.gz
[2026-01-28 10:57:46] -rw-r--r--. 2 boinc boinc 267720138 Jan 28 09:42 EVNT.48329467._000003.pool.root.1
[2026-01-28 10:57:46] -rw-r--r--. 1 boinc boinc         0 Jan 28 09:42 boinc_lockfile
[2026-01-28 10:57:46] -rw-r--r--. 1 boinc boinc      2611 Jan 28 09:42 pandaJob.out
[2026-01-28 10:57:46] -rw-------. 1 boinc boinc   1005240 Jan 28 09:43 agis_schedconf.cvmfs.json
[2026-01-28 10:57:46] -rw-------. 1 boinc boinc   1516246 Jan 28 09:43 agis_ddmendpoints.agis.ALL.json
[2026-01-28 10:57:46] -rw-------. 1 boinc boinc       428 Jan 28 09:43 workernode_map.json
[2026-01-28 10:57:46] drwx------. 5 boinc boinc      4096 Jan 28 09:43 pilot3
[2026-01-28 10:57:46] -rw-r--r--. 1 boinc boinc      9650 Jan 28 10:42 init_data.xml
[2026-01-28 10:57:46] -rw-------. 1 boinc boinc 184649457 Jan 28 10:56 HITS.48329469._000075.pool.root.1
[2026-01-28 10:57:46] -rw-------. 1 boinc boinc      1034 Jan 28 10:56 memory_monitor_summary.json
[2026-01-28 10:57:46] -rw-------. 1 boinc boinc    304456 Jan 28 10:56 log.48329469._000075.job.log.tgz.1
[2026-01-28 10:57:46] -rw-r--r--. 1 boinc boinc       529 Jan 28 10:56 boinc_task_state.xml
[2026-01-28 10:57:46] -rw-------. 1 boinc boinc        95 Jan 28 10:56 pilot_heartbeat.json
[2026-01-28 10:57:46] -rw-------. 1 boinc boinc      6334 Jan 28 10:56 heartbeat.json
[2026-01-28 10:57:46] -rw-r--r--. 1 boinc boinc      8192 Jan 28 10:57 boinc_mmap_file
[2026-01-28 10:57:46] -rw-r--r--. 1 boinc boinc        27 Jan 28 10:57 wrapper_checkpoint.txt
[2026-01-28 10:57:46] -rw-------. 1 boinc boinc      4891 Jan 28 10:57 pilotlog.txt
[2026-01-28 10:57:46] -rw-------. 1 boinc boinc    662747 Jan 28 10:57 log.48329469._000075.job.log.1
[2026-01-28 10:57:46] -rw-------. 1 boinc boinc       357 Jan 28 10:57 output.list
[2026-01-28 10:57:46] -rw-r--r--. 1 boinc boinc       620 Jan 28 10:57 runtime_log
[2026-01-28 10:57:46] -rw-------. 1 boinc boinc    983040 Jan 28 10:57 result.tar.gz
[2026-01-28 10:57:46] -rw-r--r--. 1 boinc boinc      8774 Jan 28 10:57 runtime_log.err
[2026-01-28 10:57:46] -rw-------. 1 boinc boinc       642 Jan 28 10:57 FqTMDmhEO48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmPe8KDm5FDWwm.diag
[2026-01-28 10:57:46] -rw-r--r--. 1 boinc boinc     21087 Jan 28 10:57 stderr.txt
[2026-01-28 10:57:46] HITS file was successfully produced:
[2026-01-28 10:57:46] -rw-------. 1 boinc boinc 184649457 Jan 28 10:56 shared/HITS.pool.root.1
[2026-01-28 10:57:46]  *** Contents of shared directory: ***
[2026-01-28 10:57:46] total 443332
[2026-01-28 10:57:46] -rw-r--r--. 2 boinc boinc     15845 Jan 28 09:42 start_atlas.sh
[2026-01-28 10:57:46] -rw-r--r--. 2 boinc boinc    597770 Jan 28 09:42 input.tar.gz
[2026-01-28 10:57:46] -rw-r--r--. 2 boinc boinc 267720138 Jan 28 09:42 ATLAS.root_0
[2026-01-28 10:57:46] -rw-------. 1 boinc boinc 184649457 Jan 28 10:56 HITS.pool.root.1
[2026-01-28 10:57:46] -rw-------. 1 boinc boinc    983040 Jan 28 10:57 result.tar.gz
10:57:48 (885272): run_atlas exited; CPU time 24834.998453
10:57:48 (885272): called boinc_finish(0)

</stderr_txt>
]]>

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