Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
13:20:16 (1328858): wrapper (7.7.26015): starting
13:20:16 (1328858): wrapper: running run_atlas (--nthreads 3)
[2026-01-27 13:20:16] Arguments: --nthreads 3
[2026-01-27 13:20:16] Threads: 3
[2026-01-27 13:20:16] Checking for CVMFS
[2026-01-27 13:20:16] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-27 13:20:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-27 13:20:16] Running cvmfs_config stat atlas.cern.ch
[2026-01-27 13:20:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-27 13:20:17] 2.9.2.0 4031871 9415 89144 155583 0 50 25214235 36864000 0 130560 0 4305716 99.987 307880 7103 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-27 13:20:17] CVMFS is ok
[2026-01-27 13:20:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-27 13:20:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-27 13:20:17] Further information can be found at the LHC@home message board.
[2026-01-27 13:20:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-27 13:20:17] Checking for apptainer binary...
[2026-01-27 13:20:17] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-27 13:20:17] Running /usr/bin/apptainer --version
[2026-01-27 13:20:17] apptainer version 1.4.1-1.1
[2026-01-27 13:20:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-27 13:20:17] magicA161a
[2026-01-27 13:20:17] apptainer works
[2026-01-27 13:20:17] Set ATHENA_PROC_NUMBER=3
[2026-01-27 13:20:17] Set ATHENA_CORE_NUMBER=3
[2026-01-27 13:20:17] Starting ATLAS job with PandaID=6984062799
[2026-01-27 13:20:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-27 14:39:38]  *** The last 200 lines of the pilot log: ***
[2026-01-27 14:39:38] 2026-01-27 13:38:45,177 | INFO     | current server update state: UPDATING_FINAL
[2026-01-27 14:39:38] 2026-01-27 13:38:45,177 | INFO     | update_server=False
[2026-01-27 14:39:38] 2026-01-27 13:38:45,177 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-27 14:39:38] 2026-01-27 13:38:45,177 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-27 14:39:38] 2026-01-27 13:38:45,177 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-27 14:39:38] 2026-01-27 13:38:45,177 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-27 14:39:38] 2026-01-27 13:38:45,177 | INFO     | aborting loop
[2026-01-27 14:39:38] 2026-01-27 13:38:45,177 | INFO     | found 0 job(s) in 20 queues
[2026-01-27 14:39:38] 2026-01-27 13:38:45,177 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-27 14:39:38] 2026-01-27 13:38:45,177 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-27 14:39:38] 2026-01-27 13:38:45,979 | INFO     | all data control threads have been joined
[2026-01-27 14:39:38] 2026-01-27 13:38:46,156 | INFO     | all job control threads have been joined
[2026-01-27 14:39:38] 2026-01-27 13:38:46,182 | INFO     | [job] retrieve thread has finished
[2026-01-27 14:39:38] 2026-01-27 13:38:46,183 | INFO     | [job] queue monitor thread has finished
[2026-01-27 14:39:38] 2026-01-27 13:38:46,183 | INFO     | [job] job monitor thread has finished
[2026-01-27 14:39:38] 2026-01-27 13:38:46,197 | INFO     | [payload] execute_payloads thread has finished
[2026-01-27 14:39:38] 2026-01-27 13:38:46,316 | INFO     | [data] copytool_in thread has finished
[2026-01-27 14:39:38] 2026-01-27 13:38:46,404 | INFO     | all payload control threads have been joined
[2026-01-27 14:39:38] 2026-01-27 13:38:46,519 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-27 14:39:38] 2026-01-27 13:38:46,520 | INFO     | [payload] validate_post thread has finished
[2026-01-27 14:39:38] 2026-01-27 13:38:46,980 | INFO     | [data] control thread has finished
[2026-01-27 14:39:38] 2026-01-27 13:38:47,043 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-27 14:39:38] 2026-01-27 13:38:47,155 | INFO     | [payload] failed_post thread has finished
[2026-01-27 14:39:38] 2026-01-27 13:38:47,159 | INFO     | [job] control thread has finished
[2026-01-27 14:39:38] 2026-01-27 13:38:47,410 | INFO     | [payload] control thread has finished
[2026-01-27 14:39:38] 2026-01-27 13:38:47,590 | INFO     | [job] validate thread has finished
[2026-01-27 14:39:38] 2026-01-27 13:38:47,647 | INFO     | [payload] validate_pre thread has finished
[2026-01-27 14:39:38] 2026-01-27 13:38:47,647 | INFO     | [job] create_data_payload thread has finished
[2026-01-27 14:39:38] 2026-01-27 13:38:48,526 | INFO     | [data] copytool_out thread has finished
[2026-01-27 14:39:38] 2026-01-27 13:38:51,050 | INFO     | [data] queue_monitor thread has finished
[2026-01-27 14:39:38] 2026-01-27 13:38:55,726 | INFO     | job.realtimelogging is not enabled
[2026-01-27 14:39:38] 2026-01-27 13:38:56,732 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-27 14:39:38] 2026-01-27 13:39:32,172 | INFO     | [monitor] cgroup control has ended
[2026-01-27 14:39:38] 2026-01-27 13:39:33,088 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140522508609344)>', '<ExcThread(monitor, started 140521666246400)>']
[2026-01-27 14:39:38] 2026-01-27 13:39:33,423 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-27 14:39:38] 2026-01-27 13:39:33,423 | INFO     | [monitor] control thread has ended
[2026-01-27 14:39:38] 2026-01-27 13:39:38,113 | INFO     | all workflow threads have been joined
[2026-01-27 14:39:38] 2026-01-27 13:39:38,114 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-27 14:39:38] 2026-01-27 13:39:38,114 | INFO     | traces error code: 0
[2026-01-27 14:39:38] 2026-01-27 13:39:38,114 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-27 14:39:38] 2026-01-27 13:39:38,164 [wrapper] ==== pilot stdout END ====
[2026-01-27 14:39:38] 2026-01-27 13:39:38,166 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-27 14:39:38] 2026-01-27 13:39:38,168 [wrapper] pilotpid: 1332893
[2026-01-27 14:39:38] 2026-01-27 13:39:38,170 [wrapper] Pilot exit status: 0
[2026-01-27 14:39:38] 2026-01-27 13:39:38,177 [wrapper] pandaids: 6984062799
[2026-01-27 14:39:38] 2026-01-27 13:39:38,193 [wrapper] cleanup supervisor_pilot 1342392 1332894
[2026-01-27 14:39:38] 2026-01-27 13:39:38,196 [wrapper] Test setup, not cleaning
[2026-01-27 14:39:38] 2026-01-27 13:39:38,198 [wrapper] apfmon messages muted
[2026-01-27 14:39:38] 2026-01-27 13:39:38,200 [wrapper] ==== wrapper stdout END ====
[2026-01-27 14:39:38] 2026-01-27 13:39:38,203 [wrapper] ==== wrapper stderr END ====
[2026-01-27 14:39:38]  *** Error codes and diagnostics ***
[2026-01-27 14:39:38]     "exeErrorCode": 0,
[2026-01-27 14:39:38]     "exeErrorDiag": "",
[2026-01-27 14:39:38]     "pilotErrorCode": 0,
[2026-01-27 14:39:38]     "pilotErrorDiag": "",
[2026-01-27 14:39:38]  *** Listing of results directory ***
[2026-01-27 14:39:38] total 667068
[2026-01-27 14:39:38] -rw-r--r-- 1 boinc boinc    584422 Jan 26 08:37 pilot3.tar.gz
[2026-01-27 14:39:38] -rw-r--r-- 1 boinc boinc      5111 Jan 26 08:38 queuedata.json
[2026-01-27 14:39:38] -rwx------ 1 boinc boinc     36322 Jan 26 08:39 runpilot2-wrapper.sh
[2026-01-27 14:39:38] -rw-r--r-- 1 boinc boinc       100 Jan 27 13:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-27 14:39:38] -rwxr-xr-x 1 boinc boinc      7986 Jan 27 13:20 run_atlas
[2026-01-27 14:39:38] -rw-r--r-- 1 boinc boinc       105 Jan 27 13:20 job.xml
[2026-01-27 14:39:38] -rw-r--r-- 2 boinc boinc 493864090 Jan 27 13:20 EVNT.48317869._000062.pool.root.1
[2026-01-27 14:39:38] -rw-r--r-- 2 boinc boinc    597749 Jan 27 13:20 input.tar.gz
[2026-01-27 14:39:38] -rw-r--r-- 2 boinc boinc     15845 Jan 27 13:20 start_atlas.sh
[2026-01-27 14:39:38] drwxrwx--x 2 boinc boinc      4096 Jan 27 13:20 shared
[2026-01-27 14:39:38] -rw-r--r-- 1 boinc boinc         0 Jan 27 13:20 boinc_setup_complete
[2026-01-27 14:39:38] -rw-r--r-- 1 boinc boinc      6448 Jan 27 13:20 init_data.xml
[2026-01-27 14:39:38] -rw-r--r-- 1 boinc boinc         0 Jan 27 13:20 boinc_lockfile
[2026-01-27 14:39:38] -rw-r--r-- 1 boinc boinc      2515 Jan 27 13:20 pandaJob.out
[2026-01-27 14:39:38] -rw------- 1 boinc boinc   1002853 Jan 27 13:20 agis_schedconf.cvmfs.json
[2026-01-27 14:39:38] -rw------- 1 boinc boinc   1516246 Jan 27 13:20 agis_ddmendpoints.agis.ALL.json
[2026-01-27 14:39:38] -rw------- 1 boinc boinc       427 Jan 27 13:20 workernode_map.json
[2026-01-27 14:39:38] drwx------ 5 boinc boinc      4096 Jan 27 13:20 pilot3
[2026-01-27 14:39:38] -rw------- 1 boinc boinc        95 Jan 27 14:37 pilot_heartbeat.json
[2026-01-27 14:39:38] -rw------- 1 boinc boinc 183353741 Jan 27 14:38 HITS.48317872._003102.pool.root.1
[2026-01-27 14:39:38] -rw-r--r-- 1 boinc boinc       530 Jan 27 14:38 boinc_task_state.xml
[2026-01-27 14:39:38] -rw------- 1 boinc boinc      1013 Jan 27 14:38 memory_monitor_summary.json
[2026-01-27 14:39:38] -rw------- 1 boinc boinc    279270 Jan 27 14:38 log.48317872._003102.job.log.tgz.1
[2026-01-27 14:39:38] -rw------- 1 boinc boinc      6309 Jan 27 14:38 heartbeat.json
[2026-01-27 14:39:38] -rw-r--r-- 1 boinc boinc        27 Jan 27 14:39 wrapper_checkpoint.txt
[2026-01-27 14:39:38] -rw-r--r-- 1 boinc boinc      8192 Jan 27 14:39 boinc_mmap_file
[2026-01-27 14:39:38] -rw------- 1 boinc boinc      4624 Jan 27 14:39 pilotlog.txt
[2026-01-27 14:39:38] -rw------- 1 boinc boinc    690928 Jan 27 14:39 log.48317872._003102.job.log.1
[2026-01-27 14:39:38] -rw------- 1 boinc boinc       357 Jan 27 14:39 output.list
[2026-01-27 14:39:38] -rw-r--r-- 1 boinc boinc       620 Jan 27 14:39 runtime_log
[2026-01-27 14:39:38] -rw------- 1 boinc boinc    983040 Jan 27 14:39 result.tar.gz
[2026-01-27 14:39:38] -rw-r--r-- 1 boinc boinc      8916 Jan 27 14:39 runtime_log.err
[2026-01-27 14:39:38] -rw------- 1 boinc boinc       661 Jan 27 14:39 37lLDmqMW48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm1J9KDmWjnXym.diag
[2026-01-27 14:39:38] -rw-r--r-- 1 boinc boinc      7538 Jan 27 14:39 stderr.txt
[2026-01-27 14:39:38] HITS file was successfully produced:
[2026-01-27 14:39:38] -rw------- 1 boinc boinc 183353741 Jan 27 14:38 shared/HITS.pool.root.1
[2026-01-27 14:39:38]  *** Contents of shared directory: ***
[2026-01-27 14:39:38] total 662920
[2026-01-27 14:39:38] -rw-r--r-- 2 boinc boinc 493864090 Jan 27 13:20 ATLAS.root_0
[2026-01-27 14:39:38] -rw-r--r-- 2 boinc boinc    597749 Jan 27 13:20 input.tar.gz
[2026-01-27 14:39:38] -rw-r--r-- 2 boinc boinc     15845 Jan 27 13:20 start_atlas.sh
[2026-01-27 14:39:38] -rw------- 1 boinc boinc 183353741 Jan 27 14:38 HITS.pool.root.1
[2026-01-27 14:39:38] -rw------- 1 boinc boinc    983040 Jan 27 14:39 result.tar.gz
14:39:40 (1328858): run_atlas exited; CPU time 13460.076970
14:39:40 (1328858): called boinc_finish(0)

</stderr_txt>
]]>

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